Query 001226
Match_columns 1119
No_of_seqs 1121 out of 7277
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 19:13:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001226.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001226hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-114 3E-119 1127.8 67.4 924 18-1114 22-956 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.7E-61 8E-66 626.3 35.8 496 69-642 93-588 (968)
3 KOG1187 Serine/threonine prote 100.0 2.4E-44 5.2E-49 405.2 26.3 284 824-1112 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 1.3E-43 2.8E-48 373.0 17.1 255 827-1105 75-335 (364)
5 KOG0192 Tyrosine kinase specif 100.0 1.5E-42 3.1E-47 387.1 20.6 254 837-1114 44-308 (362)
6 KOG0615 Serine/threonine prote 100.0 3.1E-43 6.6E-48 371.1 14.1 248 835-1105 173-437 (475)
7 KOG0575 Polo-like serine/threo 100.0 1.6E-42 3.6E-47 385.2 18.1 245 834-1105 18-269 (592)
8 KOG0197 Tyrosine kinases [Sign 100.0 1.7E-42 3.6E-47 382.3 16.9 257 835-1115 207-467 (468)
9 KOG0595 Serine/threonine-prote 100.0 3.9E-42 8.4E-47 364.1 16.2 197 833-1038 9-217 (429)
10 KOG1026 Nerve growth factor re 100.0 1.2E-41 2.6E-46 393.2 15.1 256 839-1115 491-768 (774)
11 KOG0593 Predicted protein kina 100.0 2.5E-41 5.5E-46 342.2 13.5 262 835-1105 3-284 (396)
12 KOG0472 Leucine-rich repeat pr 100.0 3.4E-45 7.3E-50 382.7 -15.3 488 95-662 44-541 (565)
13 KOG0472 Leucine-rich repeat pr 100.0 3.1E-44 6.7E-49 375.5 -10.1 483 235-740 41-544 (565)
14 KOG0591 NIMA (never in mitosis 100.0 2.1E-41 4.5E-46 339.4 7.7 258 832-1108 17-284 (375)
15 KOG0598 Ribosomal protein S6 k 100.0 2E-40 4.4E-45 348.9 15.5 246 833-1104 24-280 (357)
16 KOG0661 MAPK related serine/th 100.0 1.2E-40 2.5E-45 357.7 12.1 259 833-1105 9-291 (538)
17 KOG0592 3-phosphoinositide-dep 100.0 4.2E-40 9.1E-45 359.0 16.0 246 835-1105 74-338 (604)
18 KOG0659 Cdk activating kinase 100.0 2.3E-39 5E-44 323.2 18.5 260 835-1105 3-281 (318)
19 KOG0196 Tyrosine kinase, EPH ( 100.0 9.9E-41 2.1E-45 375.8 9.1 251 839-1112 634-894 (996)
20 KOG4194 Membrane glycoprotein 100.0 5.5E-41 1.2E-45 365.7 5.2 366 291-659 81-449 (873)
21 KOG4194 Membrane glycoprotein 100.0 3.1E-40 6.7E-45 359.9 8.9 367 96-489 78-447 (873)
22 KOG0578 p21-activated serine/t 100.0 2E-39 4.3E-44 357.8 14.8 246 835-1105 274-523 (550)
23 KOG0198 MEKK and related serin 100.0 2.3E-39 4.9E-44 349.5 14.5 257 834-1111 17-282 (313)
24 KOG0600 Cdc2-related protein k 100.0 3.1E-39 6.8E-44 349.4 15.5 260 835-1105 118-400 (560)
25 KOG0193 Serine/threonine prote 100.0 5.3E-39 1.1E-43 354.5 17.6 255 835-1112 393-656 (678)
26 KOG0582 Ste20-like serine/thre 100.0 2.8E-38 6.1E-43 336.8 19.0 259 834-1105 26-293 (516)
27 KOG0616 cAMP-dependent protein 100.0 1.3E-38 2.9E-43 322.3 15.3 234 833-1096 43-283 (355)
28 KOG1095 Protein tyrosine kinas 100.0 1.7E-38 3.7E-43 380.8 19.0 259 837-1116 695-968 (1025)
29 KOG0588 Serine/threonine prote 100.0 9.8E-39 2.1E-43 355.0 14.9 243 836-1106 14-264 (786)
30 KOG0597 Serine-threonine prote 100.0 4.2E-39 9.1E-44 350.0 11.0 243 835-1105 3-251 (808)
31 KOG0583 Serine/threonine prote 100.0 5.9E-38 1.3E-42 354.1 19.5 250 834-1110 17-279 (370)
32 KOG4721 Serine/threonine prote 100.0 1.6E-38 3.5E-43 344.8 12.6 244 837-1111 127-370 (904)
33 KOG1094 Discoidin domain recep 100.0 3E-38 6.5E-43 344.7 13.7 256 838-1109 542-804 (807)
34 KOG2052 Activin A type IB rece 100.0 3.3E-37 7.1E-42 328.5 21.3 262 839-1114 216-508 (513)
35 KOG0663 Protein kinase PITSLRE 100.0 1.1E-37 2.3E-42 320.3 16.1 262 831-1105 73-361 (419)
36 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.2E-37 6.9E-42 353.2 19.5 259 834-1112 7-337 (338)
37 KOG0194 Protein tyrosine kinas 100.0 8.1E-38 1.7E-42 351.9 14.1 255 837-1115 160-426 (474)
38 KOG0605 NDR and related serine 100.0 1.9E-37 4.1E-42 339.1 16.0 249 835-1105 142-445 (550)
39 KOG0201 Serine/threonine prote 100.0 3.9E-38 8.4E-43 336.2 9.9 244 836-1105 15-263 (467)
40 KOG2345 Serine/threonine prote 100.0 1.5E-37 3.2E-42 307.2 12.2 261 834-1110 21-301 (302)
41 KOG3653 Transforming growth fa 100.0 3.2E-37 7E-42 331.1 14.3 267 839-1114 215-508 (534)
42 KOG0594 Protein kinase PCTAIRE 100.0 1E-36 2.2E-41 321.6 17.0 265 833-1109 10-308 (323)
43 KOG0658 Glycogen synthase kina 100.0 1.2E-37 2.6E-42 327.1 9.9 263 835-1105 25-306 (364)
44 KOG0585 Ca2+/calmodulin-depend 100.0 7.4E-37 1.6E-41 327.7 15.6 258 831-1111 94-378 (576)
45 KOG0580 Serine/threonine prote 100.0 4.2E-37 9.1E-42 302.8 11.5 252 828-1106 16-274 (281)
46 KOG4278 Protein tyrosine kinas 100.0 3.2E-37 7E-42 336.9 11.7 257 835-1114 268-528 (1157)
47 KOG0618 Serine/threonine phosp 100.0 4E-39 8.6E-44 370.3 -3.4 448 92-590 17-465 (1081)
48 KOG4257 Focal adhesion tyrosin 100.0 2.4E-36 5.3E-41 331.2 17.0 254 835-1113 390-653 (974)
49 KOG0694 Serine/threonine prote 100.0 2.1E-36 4.6E-41 340.1 15.9 239 833-1099 367-613 (694)
50 KOG0611 Predicted serine/threo 100.0 1.2E-36 2.6E-41 317.9 12.3 245 834-1107 53-305 (668)
51 cd05096 PTKc_DDR1 Catalytic do 100.0 1.9E-35 4.1E-40 333.2 22.2 260 835-1108 6-304 (304)
52 KOG0610 Putative serine/threon 100.0 1.2E-35 2.7E-40 314.5 18.9 250 835-1105 78-392 (459)
53 cd05104 PTKc_Kit Catalytic dom 100.0 9.9E-36 2.1E-40 344.3 20.0 256 834-1109 35-374 (375)
54 KOG0660 Mitogen-activated prot 100.0 5.5E-37 1.2E-41 321.5 8.4 259 839-1105 27-310 (359)
55 cd05631 STKc_GRK4 Catalytic do 100.0 9.3E-36 2E-40 332.2 18.8 248 836-1105 2-261 (285)
56 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.7E-36 1.2E-40 334.4 16.9 266 832-1105 3-285 (288)
57 KOG0618 Serine/threonine phosp 100.0 1.6E-38 3.5E-43 365.3 -3.8 461 101-662 3-465 (1081)
58 cd05571 STKc_PKB Catalytic dom 100.0 4.7E-36 1E-40 340.6 16.3 239 840-1105 1-251 (323)
59 cd05612 STKc_PRKX_like Catalyt 100.0 3.4E-36 7.4E-41 336.6 14.9 241 835-1105 2-254 (291)
60 PHA02988 hypothetical protein; 100.0 1.4E-35 3E-40 329.8 19.1 255 827-1111 14-281 (283)
61 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-35 2.4E-40 343.5 18.9 257 834-1110 38-373 (374)
62 KOG1025 Epidermal growth facto 100.0 2E-36 4.3E-41 341.8 11.6 252 837-1112 699-960 (1177)
63 PTZ00263 protein kinase A cata 100.0 5E-36 1.1E-40 341.1 15.2 243 833-1105 17-271 (329)
64 KOG1989 ARK protein kinase fam 100.0 1.1E-35 2.4E-40 346.2 17.8 256 835-1113 38-315 (738)
65 KOG0599 Phosphorylase kinase g 100.0 2.9E-36 6.2E-41 300.5 10.6 248 834-1105 17-283 (411)
66 cd06649 PKc_MEK2 Catalytic dom 100.0 2.8E-35 6.1E-40 335.5 20.3 261 835-1106 6-302 (331)
67 KOG0033 Ca2+/calmodulin-depend 100.0 4.1E-37 8.9E-42 302.2 4.2 246 836-1105 13-267 (355)
68 cd05048 PTKc_Ror Catalytic Dom 100.0 4.8E-35 1E-39 326.5 20.7 255 834-1109 5-283 (283)
69 cd07848 STKc_CDKL5 Catalytic d 100.0 1.5E-35 3.3E-40 331.2 16.6 263 835-1105 2-284 (287)
70 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.4E-35 9.6E-40 323.4 20.0 252 834-1109 5-265 (266)
71 PHA03212 serine/threonine kina 100.0 4.8E-35 1E-39 339.1 21.0 261 835-1105 93-376 (391)
72 PTZ00426 cAMP-dependent protei 100.0 1.5E-35 3.3E-40 337.7 16.1 244 832-1105 28-284 (340)
73 cd05593 STKc_PKB_gamma Catalyt 100.0 2.4E-35 5.3E-40 335.1 17.6 239 840-1105 1-251 (328)
74 cd05595 STKc_PKB_beta Catalyti 100.0 2.3E-35 5E-40 334.7 17.3 239 840-1105 1-251 (323)
75 cd05585 STKc_YPK1_like Catalyt 100.0 2.5E-35 5.4E-40 333.0 16.9 237 842-1105 1-247 (312)
76 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.2E-35 4.8E-40 336.9 16.1 249 835-1105 2-257 (333)
77 KOG0589 Serine/threonine prote 100.0 7.9E-36 1.7E-40 329.0 11.9 248 834-1105 4-258 (426)
78 KOG0032 Ca2+/calmodulin-depend 100.0 5.5E-35 1.2E-39 329.3 18.8 247 834-1105 35-293 (382)
79 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.8E-35 1.3E-39 338.3 19.2 258 834-1111 37-399 (400)
80 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-34 2.9E-39 317.0 20.3 246 840-1108 1-252 (252)
81 cd05054 PTKc_VEGFR Catalytic d 100.0 8.5E-35 1.8E-39 331.5 19.4 258 835-1112 8-336 (337)
82 cd05052 PTKc_Abl Catalytic dom 100.0 1.4E-34 3E-39 318.9 20.1 252 835-1109 7-262 (263)
83 cd06650 PKc_MEK1 Catalytic dom 100.0 2.1E-34 4.5E-39 328.2 22.0 196 834-1038 5-205 (333)
84 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.8E-35 1.3E-39 334.8 17.5 264 835-1105 1-290 (338)
85 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-34 2.7E-39 328.3 19.8 257 834-1114 7-273 (316)
86 PTZ00267 NIMA-related protein 100.0 1E-34 2.2E-39 346.0 19.9 249 836-1105 69-323 (478)
87 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.8E-34 3.8E-39 316.8 20.3 248 834-1106 4-255 (256)
88 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.3E-34 2.7E-39 326.2 19.6 263 834-1105 5-288 (303)
89 cd05596 STKc_ROCK Catalytic do 100.0 6.6E-35 1.4E-39 336.8 17.6 250 833-1105 42-304 (370)
90 KOG0444 Cytoskeletal regulator 100.0 2E-37 4.2E-42 339.0 -3.6 364 313-735 8-375 (1255)
91 cd05608 STKc_GRK1 Catalytic do 100.0 1.4E-34 3E-39 321.8 19.2 244 842-1105 1-257 (280)
92 PLN00034 mitogen-activated pro 100.0 1.4E-34 3.1E-39 332.8 19.9 245 834-1105 74-328 (353)
93 cd05062 PTKc_IGF-1R Catalytic 100.0 2.3E-34 5E-39 319.8 20.9 254 834-1108 6-277 (277)
94 cd05592 STKc_nPKC_theta_delta 100.0 8.6E-35 1.9E-39 329.0 17.7 238 840-1104 1-247 (316)
95 KOG0444 Cytoskeletal regulator 100.0 4.2E-37 9E-42 336.5 -1.4 367 238-662 6-375 (1255)
96 cd05090 PTKc_Ror1 Catalytic do 100.0 2.3E-34 5E-39 320.9 20.6 255 834-1109 5-283 (283)
97 cd05588 STKc_aPKC Catalytic do 100.0 1.9E-34 4.2E-39 328.1 20.0 245 840-1105 1-262 (329)
98 cd05626 STKc_LATS2 Catalytic d 100.0 1E-34 2.2E-39 337.3 18.0 249 836-1105 3-305 (381)
99 cd05590 STKc_nPKC_eta Catalyti 100.0 8.6E-35 1.9E-39 329.6 16.9 239 840-1105 1-253 (320)
100 KOG0574 STE20-like serine/thre 100.0 3.8E-36 8.3E-41 302.9 5.1 246 837-1105 36-283 (502)
101 cd05618 STKc_aPKC_iota Catalyt 100.0 2E-34 4.3E-39 327.8 19.7 248 840-1105 1-262 (329)
102 KOG4279 Serine/threonine prote 100.0 2.8E-35 6.1E-40 325.8 12.0 244 840-1104 581-831 (1226)
103 cd05621 STKc_ROCK2 Catalytic d 100.0 1.1E-34 2.3E-39 334.5 17.3 249 834-1105 43-304 (370)
104 cd05628 STKc_NDR1 Catalytic do 100.0 1.3E-34 2.8E-39 334.2 18.0 197 835-1037 2-238 (363)
105 cd05033 PTKc_EphR Catalytic do 100.0 3.3E-34 7.2E-39 316.6 20.4 253 834-1109 4-265 (266)
106 cd05594 STKc_PKB_alpha Catalyt 100.0 5.3E-35 1.1E-39 332.5 14.3 239 840-1105 1-252 (325)
107 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-34 2.7E-39 328.9 17.3 239 840-1105 2-256 (323)
108 cd05049 PTKc_Trk Catalytic dom 100.0 2.4E-34 5.2E-39 320.3 19.3 254 834-1108 5-280 (280)
109 cd05605 STKc_GRK4_like Catalyt 100.0 2E-34 4.4E-39 321.4 18.6 248 836-1105 2-261 (285)
110 PTZ00036 glycogen synthase kin 100.0 8.8E-35 1.9E-39 342.3 16.5 263 835-1105 67-351 (440)
111 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.9E-35 1.1E-39 337.0 13.8 249 835-1105 2-285 (350)
112 cd05072 PTKc_Lyn Catalytic dom 100.0 3.5E-34 7.5E-39 315.5 19.8 252 834-1109 6-261 (261)
113 cd07862 STKc_CDK6 Catalytic do 100.0 2E-34 4.4E-39 322.6 18.1 262 835-1105 2-287 (290)
114 cd05591 STKc_nPKC_epsilon Cata 100.0 1.2E-34 2.5E-39 329.0 16.4 239 840-1105 1-254 (321)
115 KOG0199 ACK and related non-re 100.0 4.6E-35 1E-39 325.3 12.6 251 830-1106 109-369 (1039)
116 cd05589 STKc_PKN Catalytic dom 100.0 1.7E-34 3.7E-39 328.1 17.4 241 837-1105 2-257 (324)
117 cd05619 STKc_nPKC_theta Cataly 100.0 1.8E-34 3.8E-39 326.2 17.4 238 840-1104 1-247 (316)
118 cd05093 PTKc_TrkB Catalytic do 100.0 4.6E-34 9.9E-39 319.2 20.4 258 835-1113 6-283 (288)
119 cd05111 PTK_HER3 Pseudokinase 100.0 5.3E-34 1.2E-38 317.0 20.8 255 835-1113 8-272 (279)
120 cd08228 STKc_Nek6 Catalytic do 100.0 4.6E-34 1E-38 315.6 20.2 256 835-1110 3-266 (267)
121 PRK13184 pknD serine/threonine 100.0 3.2E-34 6.9E-39 347.7 20.4 259 835-1112 3-293 (932)
122 KOG0667 Dual-specificity tyros 100.0 1.3E-34 2.8E-39 326.6 15.7 193 835-1037 187-390 (586)
123 KOG4717 Serine/threonine prote 100.0 1.6E-34 3.4E-39 310.3 15.6 240 839-1105 23-270 (864)
124 PF07714 Pkinase_Tyr: Protein 100.0 8.9E-35 1.9E-39 319.3 14.0 246 839-1106 4-259 (259)
125 PTZ00283 serine/threonine prot 100.0 2.2E-34 4.8E-39 342.7 18.3 251 834-1105 32-297 (496)
126 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-34 2.5E-39 335.5 15.4 249 835-1105 2-296 (364)
127 cd05601 STKc_CRIK Catalytic do 100.0 6E-35 1.3E-39 333.0 12.8 249 835-1105 2-263 (330)
128 cd05094 PTKc_TrkC Catalytic do 100.0 6.1E-34 1.3E-38 318.8 20.7 258 835-1113 6-286 (291)
129 cd05620 STKc_nPKC_delta Cataly 100.0 2.2E-34 4.8E-39 325.6 17.2 238 840-1104 1-247 (316)
130 cd05607 STKc_GRK7 Catalytic do 100.0 5E-34 1.1E-38 316.8 19.8 243 842-1105 1-250 (277)
131 cd05614 STKc_MSK2_N N-terminal 100.0 1.7E-34 3.7E-39 329.5 16.3 248 836-1105 2-267 (332)
132 cd05053 PTKc_FGFR Catalytic do 100.0 5.7E-34 1.2E-38 319.5 20.2 256 834-1110 12-292 (293)
133 cd05570 STKc_PKC Catalytic dom 100.0 2.3E-34 5E-39 326.0 17.1 239 840-1105 1-252 (318)
134 cd05629 STKc_NDR_like_fungal C 100.0 1.4E-34 3E-39 336.0 15.6 249 835-1105 2-305 (377)
135 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.5E-34 1.2E-38 313.9 19.4 251 834-1109 6-261 (261)
136 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-34 3.5E-39 336.1 16.0 248 836-1105 3-305 (382)
137 cd05059 PTKc_Tec_like Catalyti 100.0 7.7E-34 1.7E-38 311.6 20.2 248 834-1106 4-255 (256)
138 cd05075 PTKc_Axl Catalytic dom 100.0 8.3E-34 1.8E-38 314.5 20.6 252 837-1109 2-271 (272)
139 cd05107 PTKc_PDGFR_beta Cataly 100.0 1E-33 2.2E-38 327.8 22.1 257 834-1110 37-400 (401)
140 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.7E-34 1.4E-38 316.1 19.8 254 834-1108 6-277 (277)
141 cd05035 PTKc_Axl_like Catalyti 100.0 9.3E-34 2E-38 314.3 20.9 252 837-1109 2-272 (273)
142 cd05068 PTKc_Frk_like Catalyti 100.0 1.2E-33 2.5E-38 311.3 21.5 251 835-1109 7-261 (261)
143 cd05091 PTKc_Ror2 Catalytic do 100.0 5.3E-34 1.1E-38 318.1 18.9 255 834-1109 5-283 (283)
144 cd05598 STKc_LATS Catalytic do 100.0 1.2E-34 2.7E-39 336.5 14.1 248 836-1105 3-301 (376)
145 cd05575 STKc_SGK Catalytic dom 100.0 2E-34 4.4E-39 327.4 15.5 234 840-1100 1-242 (323)
146 cd05045 PTKc_RET Catalytic dom 100.0 8.7E-34 1.9E-38 317.4 20.4 256 836-1112 2-289 (290)
147 KOG0577 Serine/threonine prote 100.0 3.6E-35 7.9E-40 320.1 8.9 243 836-1107 28-280 (948)
148 cd05113 PTKc_Btk_Bmx Catalytic 100.0 8.1E-34 1.8E-38 311.4 19.7 249 834-1107 4-256 (256)
149 cd05587 STKc_cPKC Catalytic do 100.0 3.6E-34 7.8E-39 325.4 17.3 243 836-1105 2-257 (324)
150 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.7E-34 5.7E-39 324.6 15.8 265 833-1105 5-286 (309)
151 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.2E-34 1.8E-38 320.3 19.6 261 834-1115 18-305 (307)
152 cd05032 PTKc_InsR_like Catalyt 100.0 1E-33 2.2E-38 314.7 20.1 254 834-1108 6-277 (277)
153 cd06646 STKc_MAP4K5 Catalytic 100.0 1E-33 2.2E-38 312.9 19.9 251 834-1106 9-266 (267)
154 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.3E-33 2.9E-38 314.8 20.6 264 837-1110 7-282 (283)
155 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.4E-33 3E-38 318.0 20.9 261 833-1114 14-301 (304)
156 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.8E-33 3.9E-38 318.4 21.8 263 834-1117 12-301 (314)
157 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.5E-34 1.6E-38 322.9 18.6 245 840-1105 1-260 (327)
158 cd05061 PTKc_InsR Catalytic do 100.0 2.1E-33 4.6E-38 313.9 21.9 260 833-1113 5-282 (288)
159 cd05616 STKc_cPKC_beta Catalyt 100.0 5.4E-34 1.2E-38 323.9 17.3 243 836-1105 2-257 (323)
160 PHA03211 serine/threonine kina 100.0 2E-33 4.3E-38 328.8 22.5 262 835-1105 170-455 (461)
161 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-33 2.4E-38 321.0 19.7 196 839-1038 6-219 (317)
162 cd08229 STKc_Nek7 Catalytic do 100.0 9.1E-34 2E-38 313.3 18.6 256 835-1110 3-266 (267)
163 cd06625 STKc_MEKK3_like Cataly 100.0 1.7E-33 3.6E-38 310.4 20.7 247 836-1105 4-260 (263)
164 cd05051 PTKc_DDR Catalytic dom 100.0 1.9E-33 4.1E-38 315.8 21.2 261 834-1108 5-296 (296)
165 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.2E-33 4.8E-38 310.4 21.4 251 840-1107 1-268 (269)
166 cd05055 PTKc_PDGFR Catalytic d 100.0 1.5E-33 3.3E-38 316.9 20.4 255 834-1109 35-301 (302)
167 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-33 2.7E-38 314.3 19.5 257 834-1114 7-273 (279)
168 cd05622 STKc_ROCK1 Catalytic d 100.0 5.9E-34 1.3E-38 328.7 17.4 250 834-1106 43-305 (371)
169 cd05060 PTKc_Syk_like Catalyti 100.0 2.2E-33 4.8E-38 308.2 21.1 246 840-1110 1-256 (257)
170 cd05103 PTKc_VEGFR2 Catalytic 100.0 9.1E-34 2E-38 324.5 18.7 259 834-1112 7-342 (343)
171 cd05088 PTKc_Tie2 Catalytic do 100.0 8.5E-34 1.8E-38 319.2 18.1 258 833-1114 6-285 (303)
172 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-33 3.1E-38 314.7 19.7 269 835-1110 5-284 (284)
173 cd05071 PTKc_Src Catalytic dom 100.0 1.8E-33 3.9E-38 309.8 20.2 252 834-1110 6-261 (262)
174 KOG0666 Cyclin C-dependent kin 100.0 6.7E-35 1.4E-39 296.2 7.9 277 826-1106 16-338 (438)
175 cd07876 STKc_JNK2 Catalytic do 100.0 1.3E-33 2.8E-38 325.8 19.8 258 832-1105 19-315 (359)
176 cd05116 PTKc_Syk Catalytic dom 100.0 1.9E-33 4.2E-38 308.7 20.1 244 841-1109 2-255 (257)
177 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-33 3.3E-38 315.3 19.6 260 836-1105 2-285 (288)
178 cd05092 PTKc_TrkA Catalytic do 100.0 1.4E-33 3.1E-38 313.9 19.0 253 835-1108 6-280 (280)
179 cd05582 STKc_RSK_N N-terminal 100.0 2.3E-34 5.1E-39 326.2 13.0 235 840-1101 2-245 (318)
180 cd05602 STKc_SGK1 Catalytic do 100.0 4.3E-34 9.4E-39 324.9 15.1 237 840-1103 1-245 (325)
181 cd05043 PTK_Ryk Pseudokinase d 100.0 2.2E-33 4.8E-38 312.5 20.4 258 834-1112 6-279 (280)
182 cd05604 STKc_SGK3 Catalytic do 100.0 3.4E-34 7.3E-39 325.8 14.1 235 840-1101 1-243 (325)
183 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.8E-33 6.1E-38 309.5 21.0 252 835-1109 6-267 (268)
184 cd05603 STKc_SGK2 Catalytic do 100.0 4.7E-34 1E-38 324.2 15.2 234 840-1100 1-242 (321)
185 cd05097 PTKc_DDR_like Catalyti 100.0 2.9E-33 6.3E-38 313.9 21.4 260 835-1108 6-295 (295)
186 PHA03207 serine/threonine kina 100.0 1.4E-33 3E-38 328.6 19.1 263 835-1105 93-375 (392)
187 PF00069 Pkinase: Protein kina 100.0 3.5E-34 7.7E-39 315.2 13.2 250 836-1105 1-257 (260)
188 cd06654 STKc_PAK1 Catalytic do 100.0 1.6E-33 3.5E-38 315.8 18.7 247 834-1105 20-270 (296)
189 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.9E-33 6.3E-38 319.6 21.1 260 834-1114 12-298 (334)
190 cd05089 PTKc_Tie1 Catalytic do 100.0 2.1E-33 4.7E-38 315.2 19.6 257 835-1115 3-281 (297)
191 cd06619 PKc_MKK5 Catalytic dom 100.0 4.5E-33 9.7E-38 309.7 22.0 246 836-1105 3-253 (279)
192 cd05095 PTKc_DDR2 Catalytic do 100.0 3.9E-33 8.4E-38 313.1 21.7 260 835-1108 6-296 (296)
193 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.5E-33 1.2E-37 307.0 22.0 256 835-1110 3-266 (267)
194 cd08529 STKc_FA2-like Catalyti 100.0 2.5E-33 5.5E-38 307.6 19.0 246 836-1105 2-253 (256)
195 cd05066 PTKc_EphR_A Catalytic 100.0 4E-33 8.6E-38 308.1 20.5 253 834-1109 4-266 (267)
196 cd05065 PTKc_EphR_B Catalytic 100.0 3.3E-33 7.1E-38 309.2 19.9 253 834-1109 4-268 (269)
197 cd07853 STKc_NLK Catalytic dom 100.0 6.2E-34 1.3E-38 330.0 14.7 260 836-1105 2-288 (372)
198 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.9E-33 8.3E-38 308.3 20.2 246 836-1105 2-264 (267)
199 cd05630 STKc_GRK6 Catalytic do 100.0 3.3E-33 7.2E-38 311.5 19.8 248 836-1105 2-261 (285)
200 cd05115 PTKc_Zap-70 Catalytic 100.0 5.4E-33 1.2E-37 304.9 21.1 245 841-1109 2-255 (257)
201 cd05050 PTKc_Musk Catalytic do 100.0 3.1E-33 6.8E-38 312.6 19.5 254 834-1108 5-288 (288)
202 cd06656 STKc_PAK3 Catalytic do 100.0 3.8E-33 8.3E-38 313.0 20.2 247 834-1105 19-269 (297)
203 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-33 3.3E-38 319.9 17.0 242 837-1105 3-257 (323)
204 PHA03209 serine/threonine kina 100.0 2.4E-33 5.2E-38 322.6 18.8 190 835-1035 67-256 (357)
205 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.9E-33 1.1E-37 310.3 20.7 266 836-1109 6-283 (284)
206 cd07861 STKc_CDK1_euk Catalyti 100.0 2E-33 4.4E-38 313.7 17.6 263 836-1105 2-282 (285)
207 cd06615 PKc_MEK Catalytic doma 100.0 4.4E-33 9.5E-38 314.3 20.5 259 836-1105 3-287 (308)
208 cd07867 STKc_CDC2L6 Catalytic 100.0 9.7E-33 2.1E-37 313.3 23.4 197 838-1038 5-219 (317)
209 cd05632 STKc_GRK5 Catalytic do 100.0 2.8E-33 6E-38 312.2 18.6 248 836-1105 2-261 (285)
210 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.6E-33 1.4E-37 305.0 21.3 250 834-1108 6-259 (260)
211 PTZ00284 protein kinase; Provi 100.0 2.5E-33 5.4E-38 334.2 19.4 260 834-1105 129-438 (467)
212 cd06612 STKc_MST1_2 Catalytic 100.0 5.6E-33 1.2E-37 304.9 20.5 248 835-1105 4-253 (256)
213 cd05627 STKc_NDR2 Catalytic do 100.0 8.6E-34 1.9E-38 327.3 14.8 248 836-1105 3-293 (360)
214 cd05057 PTKc_EGFR_like Catalyt 100.0 6.4E-33 1.4E-37 308.6 21.2 256 834-1113 7-272 (279)
215 cd00192 PTKc Catalytic domain 100.0 4.7E-33 1E-37 306.4 19.9 247 840-1107 1-262 (262)
216 cd05069 PTKc_Yes Catalytic dom 100.0 9.9E-33 2.1E-37 303.6 22.2 251 834-1109 6-260 (260)
217 cd05085 PTKc_Fer Catalytic dom 100.0 7.2E-33 1.6E-37 302.8 20.9 244 840-1108 1-250 (250)
218 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.8E-33 1.5E-37 304.9 20.7 250 835-1109 7-260 (260)
219 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.5E-33 5.4E-38 315.5 17.6 265 832-1105 4-286 (301)
220 cd08219 STKc_Nek3 Catalytic do 100.0 3.6E-33 7.8E-38 306.2 18.3 246 836-1105 2-252 (255)
221 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-33 4E-38 324.2 16.6 262 832-1105 15-311 (355)
222 cd06637 STKc_TNIK Catalytic do 100.0 4.6E-33 1E-37 308.5 19.0 247 836-1105 8-269 (272)
223 cd05047 PTKc_Tie Catalytic dom 100.0 7.3E-33 1.6E-37 306.4 20.5 247 840-1110 1-269 (270)
224 cd05039 PTKc_Csk_like Catalyti 100.0 9.6E-33 2.1E-37 303.0 21.2 247 834-1109 6-256 (256)
225 cd05082 PTKc_Csk Catalytic dom 100.0 6.7E-33 1.5E-37 304.2 19.9 248 833-1109 5-256 (256)
226 KOG4250 TANK binding protein k 100.0 1.6E-33 3.5E-38 317.6 15.2 266 839-1110 18-311 (732)
227 cd05044 PTKc_c-ros Catalytic d 100.0 5E-33 1.1E-37 307.7 18.8 248 840-1108 1-269 (269)
228 cd05110 PTKc_HER4 Catalytic do 100.0 5.4E-33 1.2E-37 312.8 19.2 256 835-1114 8-273 (303)
229 cd05040 PTKc_Ack_like Catalyti 100.0 7.1E-33 1.5E-37 304.3 19.7 246 840-1107 1-256 (257)
230 cd05042 PTKc_Aatyk Catalytic d 100.0 5.6E-33 1.2E-37 307.3 18.8 251 840-1107 1-268 (269)
231 cd05034 PTKc_Src_like Catalyti 100.0 8.4E-33 1.8E-37 304.4 20.0 252 834-1109 6-261 (261)
232 cd08227 PK_STRAD_alpha Pseudok 100.0 8.1E-33 1.8E-37 314.9 20.4 266 840-1110 4-314 (327)
233 cd05597 STKc_DMPK_like Catalyt 100.0 2.7E-33 5.8E-38 319.0 16.0 251 835-1105 2-266 (331)
234 cd07875 STKc_JNK1 Catalytic do 100.0 5.3E-33 1.1E-37 321.3 18.7 257 833-1105 23-318 (364)
235 PTZ00266 NIMA-related protein 100.0 2.8E-33 6.2E-38 340.5 17.1 250 834-1104 13-294 (1021)
236 cd06655 STKc_PAK2 Catalytic do 100.0 6.9E-33 1.5E-37 310.6 19.0 246 835-1105 20-269 (296)
237 cd05056 PTKc_FAK Catalytic dom 100.0 1.2E-32 2.5E-37 304.9 20.6 254 835-1113 7-269 (270)
238 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.8E-33 1.9E-37 308.4 19.8 267 836-1110 6-284 (284)
239 cd05058 PTKc_Met_Ron Catalytic 100.0 1.1E-32 2.4E-37 303.7 20.2 249 840-1111 1-261 (262)
240 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.2E-32 2.6E-37 304.2 20.6 255 835-1105 2-264 (267)
241 cd05041 PTKc_Fes_like Catalyti 100.0 1.7E-32 3.7E-37 300.0 21.2 245 840-1108 1-251 (251)
242 cd08221 STKc_Nek9 Catalytic do 100.0 1.2E-32 2.5E-37 302.4 19.8 248 835-1106 1-254 (256)
243 cd05112 PTKc_Itk Catalytic dom 100.0 1.1E-32 2.3E-37 302.6 19.4 248 835-1107 5-256 (256)
244 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3E-33 6.5E-38 320.9 15.4 257 834-1105 15-298 (343)
245 cd06643 STKc_SLK Catalytic dom 100.0 1.2E-32 2.6E-37 306.9 19.9 247 836-1105 7-262 (282)
246 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.4E-32 3.1E-37 304.6 20.1 252 835-1105 2-269 (272)
247 cd06640 STKc_MST4 Catalytic do 100.0 2.9E-32 6.2E-37 302.9 22.6 244 835-1105 5-253 (277)
248 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-32 2.8E-37 302.8 19.6 236 840-1106 1-261 (262)
249 cd06645 STKc_MAP4K3 Catalytic 100.0 8.4E-33 1.8E-37 305.6 18.1 249 835-1105 10-265 (267)
250 cd07839 STKc_CDK5 Catalytic do 100.0 9E-33 2E-37 308.3 18.4 261 836-1105 2-281 (284)
251 KOG0584 Serine/threonine prote 100.0 7.3E-34 1.6E-38 316.7 9.4 240 840-1105 46-296 (632)
252 cd06651 STKc_MEKK3 Catalytic d 100.0 1.7E-32 3.7E-37 302.9 20.3 247 835-1105 3-261 (266)
253 cd05623 STKc_MRCK_alpha Cataly 100.0 6.4E-33 1.4E-37 316.2 17.1 251 835-1105 2-266 (332)
254 cd06624 STKc_ASK Catalytic dom 100.0 2E-32 4.3E-37 302.7 20.4 245 840-1105 14-265 (268)
255 cd06631 STKc_YSK4 Catalytic do 100.0 1.6E-32 3.4E-37 303.0 19.6 247 836-1105 2-262 (265)
256 cd06609 STKc_MST3_like Catalyt 100.0 1.7E-32 3.6E-37 304.4 19.8 245 835-1105 2-251 (274)
257 cd05624 STKc_MRCK_beta Catalyt 100.0 5E-33 1.1E-37 316.8 15.9 251 835-1105 2-266 (331)
258 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-32 2.6E-37 306.1 18.6 243 836-1105 6-253 (277)
259 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.9E-32 4.1E-37 301.2 19.8 236 840-1107 1-259 (259)
260 cd05073 PTKc_Hck Catalytic dom 100.0 1.8E-32 3.9E-37 301.5 19.6 251 834-1109 6-260 (260)
261 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.7E-32 3.8E-37 303.8 19.5 236 841-1107 2-274 (274)
262 cd06638 STKc_myosinIIIA Cataly 100.0 2.3E-32 4.9E-37 305.4 20.4 251 835-1106 19-284 (286)
263 cd06644 STKc_STK10_LOK Catalyt 100.0 3.2E-32 7E-37 305.0 21.6 248 835-1105 13-269 (292)
264 cd05586 STKc_Sck1_like Catalyt 100.0 2.7E-33 5.8E-38 319.3 13.0 238 842-1105 1-253 (330)
265 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-32 3.6E-37 303.4 18.9 250 836-1105 2-264 (268)
266 KOG0596 Dual specificity; seri 100.0 2.8E-33 6.2E-38 305.2 12.4 246 835-1105 362-627 (677)
267 cd05046 PTK_CCK4 Pseudokinase 100.0 2.5E-32 5.4E-37 303.2 19.9 254 834-1108 5-275 (275)
268 cd08223 STKc_Nek4 Catalytic do 100.0 2.4E-32 5.1E-37 300.1 19.5 246 836-1105 2-254 (257)
269 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.8E-32 4E-37 306.1 18.9 250 835-1105 2-262 (286)
270 cd06611 STKc_SLK_like Catalyti 100.0 1.5E-32 3.2E-37 305.8 17.9 248 835-1105 6-262 (280)
271 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.9E-32 4.1E-37 306.1 18.6 262 835-1105 2-283 (286)
272 cd06632 STKc_MEKK1_plant Catal 100.0 2.4E-32 5.2E-37 300.2 19.0 244 836-1105 2-255 (258)
273 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.8E-33 1.7E-37 304.0 15.1 237 840-1107 1-258 (258)
274 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2E-32 4.3E-37 305.5 18.5 257 835-1106 6-267 (284)
275 cd06613 STKc_MAP4K3_like Catal 100.0 3.6E-32 7.8E-37 299.6 20.2 250 835-1105 4-260 (262)
276 cd08218 STKc_Nek1 Catalytic do 100.0 2.2E-32 4.8E-37 300.1 18.2 247 835-1105 1-253 (256)
277 cd07832 STKc_CCRK Catalytic do 100.0 2.8E-32 6.1E-37 304.7 19.2 260 836-1105 2-282 (286)
278 cd07844 STKc_PCTAIRE_like Cata 100.0 2.5E-32 5.5E-37 305.8 18.8 265 833-1105 4-288 (291)
279 KOG0604 MAP kinase-activated p 100.0 7E-33 1.5E-37 280.5 12.7 253 834-1105 61-322 (400)
280 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.6E-32 7.9E-37 300.5 19.6 251 840-1107 1-267 (268)
281 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.5E-32 9.7E-37 300.8 20.4 252 837-1109 2-272 (273)
282 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-32 2.6E-37 308.0 15.7 242 839-1105 27-272 (292)
283 cd05083 PTKc_Chk Catalytic dom 100.0 3.4E-32 7.4E-37 298.2 19.0 246 833-1108 5-253 (254)
284 smart00219 TyrKc Tyrosine kina 100.0 6.4E-32 1.4E-36 296.7 20.8 247 837-1106 2-258 (258)
285 cd06652 STKc_MEKK2 Catalytic d 100.0 5.1E-32 1.1E-36 298.9 20.0 247 835-1105 3-261 (265)
286 KOG0690 Serine/threonine prote 100.0 2.4E-33 5.2E-38 285.8 8.4 240 839-1105 173-424 (516)
287 cd08220 STKc_Nek8 Catalytic do 100.0 3.1E-32 6.8E-37 298.9 18.0 245 836-1105 2-253 (256)
288 cd06647 STKc_PAK_I Catalytic d 100.0 5.1E-32 1.1E-36 303.2 20.0 247 834-1105 19-269 (293)
289 KOG0579 Ste20-like serine/thre 100.0 2.6E-33 5.7E-38 307.0 9.2 243 840-1105 38-289 (1187)
290 KOG0983 Mitogen-activated prot 100.0 4.9E-33 1.1E-37 277.8 10.1 244 839-1105 97-349 (391)
291 cd06659 STKc_PAK6 Catalytic do 100.0 2.2E-32 4.9E-37 306.6 16.7 242 839-1105 26-271 (297)
292 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.2E-31 2.5E-36 299.7 22.3 256 836-1105 3-266 (287)
293 cd05580 STKc_PKA Catalytic dom 100.0 4E-32 8.6E-37 303.9 18.1 241 835-1105 2-254 (290)
294 cd07841 STKc_CDK7 Catalytic do 100.0 6E-32 1.3E-36 303.9 19.6 261 836-1105 2-282 (298)
295 cd06626 STKc_MEKK4 Catalytic d 100.0 7.7E-32 1.7E-36 297.3 20.1 250 835-1105 1-261 (264)
296 cd06605 PKc_MAPKK Catalytic do 100.0 2.3E-32 5E-37 301.7 15.9 248 837-1105 4-257 (265)
297 cd05609 STKc_MAST Catalytic do 100.0 5.4E-32 1.2E-36 305.1 19.1 251 836-1108 3-273 (305)
298 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-33 2.6E-38 335.4 5.8 245 838-1105 1239-1494(1509)
299 KOG0986 G protein-coupled rece 100.0 7.3E-33 1.6E-37 294.9 11.0 239 837-1098 188-434 (591)
300 cd07836 STKc_Pho85 Catalytic d 100.0 5.8E-32 1.3E-36 301.8 19.0 264 836-1105 2-281 (284)
301 cd06641 STKc_MST3 Catalytic do 100.0 1.2E-31 2.7E-36 297.8 21.4 243 836-1105 6-253 (277)
302 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.9E-32 8.4E-37 303.6 17.5 262 835-1105 2-283 (286)
303 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.2E-32 1.6E-36 300.7 19.4 248 835-1105 17-279 (282)
304 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.2E-31 2.6E-36 300.3 21.1 264 834-1105 5-288 (291)
305 cd05574 STKc_phototropin_like 100.0 7.3E-32 1.6E-36 305.9 19.4 250 835-1105 2-289 (316)
306 cd06917 STKc_NAK1_like Catalyt 100.0 1.5E-31 3.2E-36 297.4 21.5 244 836-1105 3-255 (277)
307 cd05633 STKc_GRK3 Catalytic do 100.0 6.5E-32 1.4E-36 300.1 18.5 239 841-1105 1-255 (279)
308 cd06648 STKc_PAK_II Catalytic 100.0 9.4E-32 2E-36 299.9 19.6 245 836-1105 21-269 (285)
309 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.9E-32 1.5E-36 301.0 18.5 248 836-1105 3-261 (283)
310 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-31 2.4E-36 300.9 20.2 265 833-1105 4-290 (293)
311 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-31 2.6E-36 296.7 19.9 250 836-1107 2-268 (269)
312 KOG0607 MAP kinase-interacting 100.0 1.7E-32 3.6E-37 279.5 11.4 268 828-1105 73-361 (463)
313 cd06639 STKc_myosinIIIB Cataly 100.0 1.4E-31 3E-36 299.8 19.9 250 835-1105 23-287 (291)
314 cd07845 STKc_CDK10 Catalytic d 100.0 1.2E-31 2.5E-36 303.1 19.4 266 832-1105 5-290 (309)
315 cd06608 STKc_myosinIII_like Ca 100.0 1.1E-31 2.5E-36 297.8 18.9 251 834-1105 6-272 (275)
316 cd06623 PKc_MAPKK_plant_like C 100.0 2.5E-31 5.3E-36 293.2 21.3 247 836-1105 3-256 (264)
317 cd07833 STKc_CDKL Catalytic do 100.0 8.9E-32 1.9E-36 301.0 17.9 263 835-1105 2-285 (288)
318 cd05577 STKc_GRK Catalytic dom 100.0 1.3E-31 2.8E-36 297.7 19.0 242 842-1105 1-254 (277)
319 cd07842 STKc_CDK8_like Catalyt 100.0 8.9E-32 1.9E-36 305.3 17.9 266 836-1105 2-313 (316)
320 cd08217 STKc_Nek2 Catalytic do 100.0 1E-31 2.2E-36 296.4 17.7 247 836-1105 2-262 (265)
321 cd07860 STKc_CDK2_3 Catalytic 100.0 7.9E-32 1.7E-36 300.7 16.8 262 836-1105 2-281 (284)
322 PHA03390 pk1 serine/threonine- 100.0 3E-31 6.6E-36 292.6 21.2 242 836-1105 16-262 (267)
323 cd06607 STKc_TAO Catalytic dom 100.0 2.7E-31 5.9E-36 299.7 21.1 244 835-1107 16-269 (307)
324 cd08225 STKc_Nek5 Catalytic do 100.0 7.8E-32 1.7E-36 295.9 16.2 246 836-1105 2-254 (257)
325 cd05572 STKc_cGK_PKG Catalytic 100.0 2.1E-31 4.5E-36 293.5 19.4 240 842-1105 1-252 (262)
326 KOG0586 Serine/threonine prote 100.0 6.3E-32 1.4E-36 301.2 15.0 248 836-1111 58-312 (596)
327 cd05122 PKc_STE Catalytic doma 100.0 3E-31 6.4E-36 290.2 20.1 246 836-1105 2-251 (253)
328 cd05578 STKc_Yank1 Catalytic d 100.0 5.2E-32 1.1E-36 297.6 14.1 244 836-1104 2-254 (258)
329 KOG4236 Serine/threonine prote 100.0 1.5E-32 3.4E-37 295.7 9.2 256 825-1105 555-819 (888)
330 cd07849 STKc_ERK1_2_like Catal 100.0 6.4E-32 1.4E-36 308.8 14.9 269 835-1112 6-301 (336)
331 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-31 3.5E-36 300.0 17.8 264 835-1105 2-291 (295)
332 cd06616 PKc_MKK4 Catalytic dom 100.0 8E-32 1.7E-36 301.3 15.3 250 836-1105 6-267 (288)
333 cd06606 STKc_MAPKKK Catalytic 100.0 2.9E-31 6.3E-36 291.6 19.4 248 836-1105 2-257 (260)
334 KOG1024 Receptor-like protein 100.0 4.7E-32 1E-36 283.2 12.2 254 838-1112 288-558 (563)
335 PHA02882 putative serine/threo 100.0 3.8E-31 8.2E-36 296.2 20.3 255 835-1107 13-294 (294)
336 cd07865 STKc_CDK9 Catalytic do 100.0 2.1E-31 4.5E-36 301.4 18.0 268 831-1105 9-307 (310)
337 cd06657 STKc_PAK4 Catalytic do 100.0 1.7E-31 3.7E-36 298.6 17.0 241 840-1105 26-270 (292)
338 cd05606 STKc_beta_ARK Catalyti 100.0 3.5E-31 7.6E-36 294.1 19.3 239 841-1105 1-255 (278)
339 cd07831 STKc_MOK Catalytic dom 100.0 3.9E-31 8.5E-36 294.8 19.7 257 837-1105 2-279 (282)
340 cd06614 STKc_PAK Catalytic dom 100.0 4.5E-31 9.7E-36 294.9 19.9 247 836-1105 21-270 (286)
341 cd06635 STKc_TAO1 Catalytic do 100.0 9.9E-31 2.2E-35 296.4 22.9 249 836-1113 27-285 (317)
342 cd06627 STKc_Cdc7_like Catalyt 100.0 4.6E-31 1E-35 289.2 19.2 244 836-1105 2-251 (254)
343 cd07835 STKc_CDK1_like Catalyt 100.0 2E-31 4.3E-36 297.3 16.4 260 837-1105 2-280 (283)
344 KOG0662 Cyclin-dependent kinas 100.0 5.6E-32 1.2E-36 253.5 9.9 260 836-1105 4-283 (292)
345 cd05118 STKc_CMGC Catalytic do 100.0 5.5E-31 1.2E-35 293.7 19.8 261 837-1105 2-280 (283)
346 cd05611 STKc_Rim15_like Cataly 100.0 3.8E-31 8.3E-36 291.0 18.1 238 840-1104 2-247 (260)
347 cd08226 PK_STRAD_beta Pseudoki 100.0 5.4E-31 1.2E-35 300.0 19.7 259 841-1105 5-308 (328)
348 cd07852 STKc_MAPK15 Catalytic 100.0 5.7E-31 1.2E-35 301.2 19.8 270 834-1112 7-304 (337)
349 cd07850 STKc_JNK Catalytic dom 100.0 5.5E-31 1.2E-35 303.2 19.7 257 833-1105 15-311 (353)
350 cd07840 STKc_CDK9_like Catalyt 100.0 4.5E-31 9.7E-36 295.1 18.1 261 837-1105 2-284 (287)
351 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.2E-31 4.8E-36 304.3 15.2 272 835-1115 6-303 (337)
352 PLN00009 cyclin-dependent kina 100.0 4.1E-31 8.9E-36 296.5 17.1 263 835-1105 3-284 (294)
353 cd07864 STKc_CDK12 Catalytic d 100.0 1.1E-30 2.3E-35 294.4 20.5 265 833-1105 6-299 (302)
354 cd05579 STKc_MAST_like Catalyt 100.0 3.3E-31 7.2E-36 292.3 15.7 243 842-1107 1-256 (265)
355 cd07838 STKc_CDK4_6_like Catal 100.0 2E-30 4.2E-35 289.9 21.9 260 837-1105 2-284 (287)
356 KOG1035 eIF-2alpha kinase GCN2 100.0 1.1E-31 2.4E-36 317.6 11.9 246 837-1104 482-870 (1351)
357 cd08530 STKc_CNK2-like Catalyt 100.0 5.4E-31 1.2E-35 289.1 16.7 245 836-1105 2-253 (256)
358 cd08216 PK_STRAD Pseudokinase 100.0 1.7E-30 3.6E-35 294.5 21.2 256 846-1105 12-295 (314)
359 PHA03210 serine/threonine kina 100.0 3.9E-31 8.5E-36 316.0 16.7 268 833-1105 147-454 (501)
360 KOG0612 Rho-associated, coiled 100.0 4.1E-32 8.8E-37 318.5 7.8 248 835-1105 76-338 (1317)
361 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-30 2.7E-35 287.7 19.0 247 835-1105 3-261 (264)
362 cd07830 STKc_MAK_like Catalyti 100.0 8.8E-31 1.9E-35 292.1 17.8 262 836-1105 1-280 (283)
363 cd07855 STKc_ERK5 Catalytic do 100.0 5.5E-31 1.2E-35 300.8 16.4 263 834-1105 5-294 (334)
364 KOG0200 Fibroblast/platelet-de 100.0 6.4E-31 1.4E-35 318.4 17.4 255 837-1111 299-581 (609)
365 KOG0669 Cyclin T-dependent kin 100.0 2.1E-32 4.5E-37 270.1 3.4 267 834-1106 17-316 (376)
366 PTZ00024 cyclin-dependent prot 100.0 2.9E-30 6.2E-35 295.2 21.3 260 839-1105 14-313 (335)
367 cd08215 STKc_Nek Catalytic dom 100.0 1.5E-30 3.3E-35 285.6 18.0 247 836-1105 2-255 (258)
368 cd05581 STKc_PDK1 Catalytic do 100.0 5.3E-31 1.2E-35 293.3 14.4 246 835-1105 2-277 (280)
369 cd07834 STKc_MAPK Catalytic do 100.0 6.7E-31 1.5E-35 300.0 15.5 271 835-1112 1-298 (330)
370 cd07866 STKc_BUR1 Catalytic do 100.0 8E-31 1.7E-35 296.8 15.6 267 833-1105 7-308 (311)
371 cd05613 STKc_MSK1_N N-terminal 100.0 1.7E-30 3.8E-35 290.8 18.2 248 836-1105 2-268 (290)
372 KOG0671 LAMMER dual specificit 100.0 1.4E-31 3.1E-36 281.2 8.5 260 834-1105 89-406 (415)
373 cd07879 STKc_p38delta_MAPK13 C 100.0 6.5E-31 1.4E-35 301.0 14.8 264 835-1113 16-307 (342)
374 KOG0603 Ribosomal protein S6 k 100.0 7.3E-31 1.6E-35 294.4 14.4 240 835-1106 323-564 (612)
375 cd06634 STKc_TAO2 Catalytic do 100.0 3.4E-30 7.4E-35 290.7 19.6 245 836-1109 17-271 (308)
376 cd06618 PKc_MKK7 Catalytic dom 100.0 2.2E-30 4.7E-35 290.8 17.3 251 833-1106 14-274 (296)
377 cd05610 STKc_MASTL Catalytic d 100.0 2.1E-30 4.6E-35 319.2 18.8 143 833-981 3-152 (669)
378 cd06633 STKc_TAO3 Catalytic do 100.0 7.5E-30 1.6E-34 288.5 21.6 241 836-1105 23-273 (313)
379 cd08222 STKc_Nek11 Catalytic d 100.0 1.9E-30 4.1E-35 285.5 15.7 247 835-1105 1-257 (260)
380 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.8E-30 3.8E-35 297.4 15.4 263 835-1105 6-300 (342)
381 cd05583 STKc_MSK_N N-terminal 100.0 2.4E-30 5.3E-35 289.3 16.2 252 836-1109 2-267 (288)
382 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.1E-30 4.6E-35 297.0 15.5 257 835-1105 18-300 (345)
383 cd05123 STKc_AGC Catalytic dom 100.0 3.5E-30 7.6E-35 281.6 16.5 236 842-1104 1-246 (250)
384 cd07829 STKc_CDK_like Catalyti 100.0 3.7E-30 7.9E-35 286.9 16.8 258 837-1105 2-279 (282)
385 KOG1151 Tousled-like protein k 100.0 6.3E-31 1.4E-35 277.8 10.0 253 835-1104 464-740 (775)
386 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 8.7E-30 1.9E-34 289.6 20.1 263 835-1112 11-297 (328)
387 cd05576 STKc_RPK118_like Catal 100.0 4.7E-30 1E-34 277.8 17.1 220 845-1099 4-223 (237)
388 KOG1006 Mitogen-activated prot 100.0 2.1E-32 4.6E-37 272.5 -1.2 256 828-1105 61-327 (361)
389 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.3E-30 1.4E-34 292.8 18.3 260 835-1109 16-304 (343)
390 cd07857 STKc_MPK1 Catalytic do 100.0 7.1E-30 1.5E-34 291.4 17.3 263 836-1105 2-292 (332)
391 cd07851 STKc_p38 Catalytic dom 100.0 2E-30 4.3E-35 297.1 11.7 257 835-1105 16-298 (343)
392 PLN03225 Serine/threonine-prot 100.0 5.4E-30 1.2E-34 307.2 15.6 261 834-1105 132-450 (566)
393 KOG0696 Serine/threonine prote 100.0 6.3E-30 1.4E-34 268.4 10.3 235 836-1097 351-593 (683)
394 KOG0587 Traf2- and Nck-interac 100.0 8E-29 1.7E-33 284.8 17.7 245 839-1105 24-282 (953)
395 KOG1290 Serine/threonine prote 100.0 1.6E-28 3.6E-33 264.5 17.3 262 835-1105 79-550 (590)
396 KOG0695 Serine/threonine prote 100.0 3.5E-29 7.6E-34 256.1 11.5 244 835-1097 251-502 (593)
397 KOG0668 Casein kinase II, alph 100.0 2E-29 4.4E-34 245.7 7.7 264 830-1105 34-322 (338)
398 KOG0614 cGMP-dependent protein 100.0 4.6E-30 1E-34 276.4 2.9 241 840-1106 426-678 (732)
399 KOG1027 Serine/threonine prote 100.0 1.7E-29 3.6E-34 289.0 7.1 242 840-1105 515-767 (903)
400 smart00220 S_TKc Serine/Threon 100.0 4.8E-28 1E-32 263.0 16.7 235 846-1104 1-240 (244)
401 KOG0608 Warts/lats-like serine 100.0 5.8E-28 1.3E-32 265.9 16.0 198 840-1043 635-879 (1034)
402 KOG0664 Nemo-like MAPK-related 100.0 6.4E-30 1.4E-34 254.9 -0.5 260 839-1106 58-344 (449)
403 KOG0984 Mitogen-activated prot 99.9 3.1E-28 6.8E-33 234.2 9.2 195 839-1039 51-256 (282)
404 PLN03224 probable serine/threo 99.9 3.7E-27 8E-32 274.8 19.3 258 834-1105 145-500 (507)
405 KOG1152 Signal transduction se 99.9 3.5E-28 7.6E-33 266.2 9.4 198 829-1036 556-770 (772)
406 KOG0665 Jun-N-terminal kinase 99.9 1.7E-27 3.8E-32 244.6 8.0 255 834-1105 17-310 (369)
407 cd00180 PKc Catalytic domain o 99.9 1.7E-25 3.6E-30 237.1 20.6 208 842-1106 1-215 (215)
408 KOG0670 U4/U6-associated splic 99.9 2.2E-27 4.7E-32 256.5 5.4 263 835-1105 433-746 (752)
409 KOG1345 Serine/threonine kinas 99.9 1.4E-26 3E-31 231.7 8.4 249 835-1106 25-285 (378)
410 KOG0576 Mitogen-activated prot 99.9 6.2E-27 1.3E-31 260.8 5.4 248 835-1104 16-270 (829)
411 KOG1167 Serine/threonine prote 99.9 7.2E-26 1.6E-30 242.1 9.7 262 835-1105 37-381 (418)
412 KOG4237 Extracellular matrix p 99.9 4.2E-27 9.1E-32 247.5 -3.9 305 73-420 50-358 (498)
413 PLN03210 Resistant to P. syrin 99.9 8.3E-24 1.8E-28 275.5 24.3 339 305-660 551-904 (1153)
414 smart00221 STYKc Protein kinas 99.9 6.1E-24 1.3E-28 227.9 17.6 195 837-1037 2-202 (225)
415 KOG4237 Extracellular matrix p 99.9 1.8E-26 3.8E-31 242.8 -2.3 413 270-732 52-498 (498)
416 PLN03210 Resistant to P. syrin 99.9 1.2E-23 2.6E-28 273.9 23.5 339 377-733 551-904 (1153)
417 PRK15387 E3 ubiquitin-protein 99.9 1.4E-23 3E-28 252.6 15.2 265 384-742 201-465 (788)
418 PRK15387 E3 ubiquitin-protein 99.9 7.4E-23 1.6E-27 246.3 16.4 127 530-673 343-469 (788)
419 PLN00181 protein SPA1-RELATED; 99.9 1.4E-23 3.1E-28 265.7 9.3 197 883-1105 28-265 (793)
420 smart00750 KIND kinase non-cat 99.9 1.9E-22 4.2E-27 207.4 13.4 170 912-1112 1-172 (176)
421 KOG0195 Integrin-linked kinase 99.9 4.1E-23 8.9E-28 206.4 6.5 241 840-1110 196-447 (448)
422 KOG1165 Casein kinase (serine/ 99.9 5E-21 1.1E-25 197.5 16.7 261 835-1112 29-302 (449)
423 KOG1164 Casein kinase (serine/ 99.9 1.1E-20 2.4E-25 213.3 19.7 261 835-1114 19-302 (322)
424 PRK09188 serine/threonine prot 99.9 2.8E-21 6.1E-26 216.2 14.1 160 835-1010 19-195 (365)
425 PRK15370 E3 ubiquitin-protein 99.8 5.6E-21 1.2E-25 232.1 13.0 246 361-662 179-428 (754)
426 KOG1163 Casein kinase (serine/ 99.8 1.5E-20 3.2E-25 185.6 12.9 199 835-1039 16-225 (341)
427 PRK15370 E3 ubiquitin-protein 99.8 6.3E-21 1.4E-25 231.7 12.5 187 482-711 242-428 (754)
428 KOG0590 Checkpoint kinase and 99.8 2.7E-21 6E-26 230.8 8.5 249 839-1104 323-584 (601)
429 COG0515 SPS1 Serine/threonine 99.8 2E-18 4.3E-23 197.3 21.7 258 836-1105 2-275 (384)
430 KOG0617 Ras suppressor protein 99.8 5.7E-21 1.2E-25 178.7 -2.6 182 551-739 31-216 (264)
431 cd05147 RIO1_euk RIO kinase fa 99.8 6.9E-19 1.5E-23 181.4 10.2 134 840-983 3-167 (190)
432 PF14531 Kinase-like: Kinase-l 99.8 1.2E-18 2.7E-23 186.1 11.3 227 838-1096 16-288 (288)
433 PRK12274 serine/threonine prot 99.8 6.4E-18 1.4E-22 171.0 13.7 182 838-1038 6-210 (218)
434 KOG0617 Ras suppressor protein 99.8 2.8E-20 6E-25 174.1 -3.9 160 459-624 35-195 (264)
435 cd00116 LRR_RI Leucine-rich re 99.7 9.1E-20 2E-24 207.1 -0.9 277 244-540 3-318 (319)
436 cd05145 RIO1_like RIO kinase f 99.7 6.3E-18 1.4E-22 175.3 13.0 136 839-985 2-169 (190)
437 PRK10359 lipopolysaccharide co 99.7 1.1E-18 2.3E-23 181.1 6.5 164 835-1029 32-216 (232)
438 cd00116 LRR_RI Leucine-rich re 99.7 1.2E-19 2.5E-24 206.2 -2.0 264 93-396 20-319 (319)
439 KOG1240 Protein kinase contain 99.7 6.8E-19 1.5E-23 207.2 2.7 243 837-1106 26-292 (1431)
440 KOG1166 Mitotic checkpoint ser 99.7 1E-17 2.2E-22 202.8 11.0 247 835-1112 699-956 (974)
441 KOG1023 Natriuretic peptide re 99.7 1.9E-17 4.1E-22 188.0 12.4 220 881-1113 1-228 (484)
442 KOG0603 Ribosomal protein S6 k 99.7 3.3E-18 7E-23 193.2 3.3 221 842-1099 2-232 (612)
443 KOG4158 BRPK/PTEN-induced prot 99.7 8.9E-17 1.9E-21 169.8 13.1 197 885-1106 274-511 (598)
444 PRK10345 hypothetical protein; 99.7 2.3E-16 4.9E-21 163.9 12.8 132 837-980 5-156 (210)
445 smart00090 RIO RIO-like kinase 99.6 7.7E-16 1.7E-20 164.3 12.4 138 836-984 30-199 (237)
446 KOG0606 Microtubule-associated 99.6 1.1E-16 2.3E-21 189.2 5.2 205 839-1098 88-305 (1205)
447 KOG1033 eIF-2alpha kinase PEK/ 99.6 1E-16 2.3E-21 177.7 3.0 176 900-1102 329-509 (516)
448 PRK14879 serine/threonine prot 99.6 4.4E-15 9.6E-20 157.5 11.7 130 840-982 2-143 (211)
449 cd05144 RIO2_C RIO kinase fami 99.6 8.4E-15 1.8E-19 153.3 11.5 132 836-984 17-176 (198)
450 PRK09605 bifunctional UGMP fam 99.6 6.2E-15 1.3E-19 178.0 11.9 131 836-983 335-477 (535)
451 TIGR03724 arch_bud32 Kae1-asso 99.6 7.8E-15 1.7E-19 154.0 10.5 126 841-982 1-138 (199)
452 PLN03150 hypothetical protein; 99.6 1.4E-14 3E-19 176.5 12.3 147 23-179 370-526 (623)
453 PLN03150 hypothetical protein; 99.5 8.1E-15 1.7E-19 178.6 9.4 90 679-795 471-564 (623)
454 KOG0590 Checkpoint kinase and 99.5 5E-15 1.1E-19 177.4 0.8 250 837-1105 23-286 (601)
455 cd05120 APH_ChoK_like Aminogly 99.5 2.4E-13 5.3E-18 135.7 12.6 132 839-982 3-138 (155)
456 KOG0532 Leucine-rich repeat (L 99.5 3E-15 6.5E-20 165.6 -3.1 195 481-685 75-271 (722)
457 KOG0532 Leucine-rich repeat (L 99.5 3.6E-15 7.9E-20 164.9 -2.8 195 456-660 74-271 (722)
458 cd05119 RIO RIO kinase family, 99.5 2.6E-13 5.6E-18 140.9 10.9 133 839-985 2-166 (187)
459 PRK01723 3-deoxy-D-manno-octul 99.5 5.8E-13 1.3E-17 142.6 13.6 134 837-983 34-192 (239)
460 COG4886 Leucine-rich repeat (L 99.4 2.9E-13 6.3E-18 158.3 6.1 242 481-735 116-358 (394)
461 COG4886 Leucine-rich repeat (L 99.4 9.4E-13 2E-17 153.9 7.9 202 475-711 157-358 (394)
462 KOG1909 Ran GTPase-activating 99.3 8.1E-14 1.8E-18 146.5 -2.8 191 92-301 26-254 (382)
463 TIGR01982 UbiB 2-polyprenylphe 99.3 9.1E-12 2E-16 145.1 13.1 145 832-985 115-309 (437)
464 KOG1266 Protein kinase [Signal 99.3 2.1E-12 4.5E-17 134.2 5.1 205 881-1107 121-333 (458)
465 KOG1259 Nischarin, modulator o 99.2 6E-12 1.3E-16 128.8 2.0 140 543-712 274-413 (490)
466 cd05151 ChoK Choline Kinase (C 99.2 9.2E-11 2E-15 119.6 10.3 127 840-982 4-136 (170)
467 PRK04750 ubiB putative ubiquin 99.2 8.9E-11 1.9E-15 137.9 11.2 136 840-985 125-316 (537)
468 KOG0601 Cyclin-dependent kinas 99.1 5.6E-11 1.2E-15 135.5 7.5 245 836-1105 116-379 (524)
469 KOG1909 Ran GTPase-activating 99.1 2.4E-12 5.2E-17 135.6 -3.8 248 114-396 24-310 (382)
470 KOG1243 Protein kinase [Genera 99.1 1.1E-09 2.3E-14 126.0 15.6 167 852-1032 30-200 (690)
471 KOG3207 Beta-tubulin folding c 99.1 1.8E-11 3.8E-16 132.4 0.8 211 166-397 119-339 (505)
472 KOG3207 Beta-tubulin folding c 99.1 2.4E-11 5.2E-16 131.4 1.6 163 332-518 117-284 (505)
473 KOG1259 Nischarin, modulator o 99.1 2.8E-11 6.1E-16 124.0 1.9 130 335-470 283-412 (490)
474 cd05146 RIO3_euk RIO kinase fa 99.1 6.8E-10 1.5E-14 113.2 11.1 133 840-984 3-175 (197)
475 PF14580 LRR_9: Leucine-rich r 99.0 2.3E-10 5.1E-15 114.2 5.4 126 334-463 17-146 (175)
476 KOG0531 Protein phosphatase 1, 99.0 4.7E-11 1E-15 139.7 0.4 245 337-619 73-323 (414)
477 KOG0531 Protein phosphatase 1, 99.0 4.8E-11 1E-15 139.6 -0.2 218 382-614 70-290 (414)
478 PF14580 LRR_9: Leucine-rich r 99.0 3E-10 6.5E-15 113.4 4.1 80 121-205 20-101 (175)
479 KOG4658 Apoptotic ATPase [Sign 99.0 5.6E-10 1.2E-14 138.8 6.4 107 96-203 545-653 (889)
480 COG4248 Uncharacterized protei 98.9 3.1E-08 6.7E-13 107.2 16.7 267 837-1114 14-305 (637)
481 KOG0601 Cyclin-dependent kinas 98.9 7.5E-10 1.6E-14 126.5 3.8 244 835-1111 266-520 (524)
482 cd05154 ACAD10_11_like Acyl-Co 98.9 1.3E-08 2.8E-13 108.9 13.0 138 840-982 4-206 (223)
483 KOG0606 Microtubule-associated 98.9 8E-10 1.7E-14 132.0 3.1 242 837-1100 807-1084(1205)
484 COG3642 Mn2+-dependent serine/ 98.9 1.2E-08 2.5E-13 99.8 10.3 128 840-983 2-141 (204)
485 KOG3087 Serine/threonine prote 98.7 6.3E-08 1.4E-12 94.0 10.2 137 840-982 13-165 (229)
486 KOG4658 Apoptotic ATPase [Sign 98.7 2.1E-08 4.6E-13 124.9 7.9 296 287-610 522-828 (889)
487 PF08263 LRRNT_2: Leucine rich 98.7 8.8E-09 1.9E-13 77.2 2.3 41 24-65 2-43 (43)
488 PF13855 LRR_8: Leucine rich r 98.7 1.6E-08 3.4E-13 83.0 3.8 59 554-612 2-60 (61)
489 KOG1859 Leucine-rich repeat pr 98.7 4.7E-10 1E-14 127.9 -7.3 197 263-470 83-292 (1096)
490 PF13855 LRR_8: Leucine rich r 98.7 2E-08 4.2E-13 82.5 3.8 59 602-660 2-60 (61)
491 COG0478 RIO-like serine/threon 98.7 1.3E-07 2.9E-12 98.1 10.6 129 838-982 95-251 (304)
492 PF01163 RIO1: RIO1 family; I 98.6 1.1E-07 2.3E-12 96.9 9.7 121 849-983 1-156 (188)
493 PRK15123 lipopolysaccharide co 98.6 4.1E-07 9E-12 98.5 14.7 139 838-982 26-194 (268)
494 KOG2982 Uncharacterized conser 98.6 1.7E-08 3.8E-13 104.0 3.0 216 237-473 43-265 (418)
495 KOG3741 Poly(A) ribonuclease s 98.6 1E-06 2.2E-11 98.5 16.7 167 846-1034 288-475 (655)
496 COG5238 RNA1 Ran GTPase-activa 98.5 9.6E-09 2.1E-13 104.5 -1.7 218 89-325 23-285 (388)
497 KOG2120 SCF ubiquitin ligase, 98.5 3.4E-09 7.3E-14 109.2 -5.8 180 144-370 185-373 (419)
498 KOG2982 Uncharacterized conser 98.4 7.1E-08 1.5E-12 99.6 1.8 87 383-469 70-158 (418)
499 COG0661 AarF Predicted unusual 98.4 1.6E-06 3.4E-11 101.7 12.4 139 838-985 129-317 (517)
500 KOG1859 Leucine-rich repeat pr 98.4 7.9E-09 1.7E-13 118.2 -6.8 179 92-277 105-292 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-114 Score=1127.82 Aligned_cols=924 Identities=33% Similarity=0.574 Sum_probs=576.0
Q ss_pred hccccCCCcHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCceeeeeeeecCCCceEEEecCCCcccccCccchhhhccCCc
Q 001226 18 ALSVSSPPSAISLVQFLDSLPKQSQSHLPWNQSVSTSAPCKWSGVSCYNNSSSLKALNLSGFGLSGVLNNSISYICKNQH 97 (1119)
Q Consensus 18 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~~w~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~~~~~~~l~~ 97 (1119)
..+.+.++|+.||++||+++.++.+.+.+|+. ..+||.|.||+|++ .++|+.|+|++++++|.+++. +..+++
T Consensus 22 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~---~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~---~~~l~~ 94 (968)
T PLN00113 22 NFSMLHAEELELLLSFKSSINDPLKYLSNWNS---SADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSA---IFRLPY 94 (968)
T ss_pred HccCCCHHHHHHHHHHHHhCCCCcccCCCCCC---CCCCCcCcceecCC-CCcEEEEEecCCCccccCChH---HhCCCC
Confidence 44555788999999999999766556779964 36799999999985 468888888887777665532 345566
Q ss_pred ccEEEcCCCcccCCCCcccc-cCCCccEEEcccccccccCCccccccCccCEEEccCccccCCCCcccccccccceeeec
Q 001226 98 LLSLDLSGNEFTGSIPKQLG-NCGQLKTLLLNDNRFQGSIPPEIFKLKRLSWLDLGYNSLSGKIPPQVSLCYSLESIGFH 176 (1119)
Q Consensus 98 l~~L~Ls~n~~~~~~~~~l~-~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 176 (1119)
|++|+|++|.++|.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..++++++|++|+++
T Consensus 95 L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~ 172 (968)
T PLN00113 95 IQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLG 172 (968)
T ss_pred CCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECc
Confidence 66666666666665655543 566666666666666555553 335555555555555554444444444444444444
Q ss_pred ccccccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCCCCCcEEEccCCccCCccC
Q 001226 177 NNFLNGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNCRNLVEFSASSNNFGGAIS 256 (1119)
Q Consensus 177 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i~~~~~ 256 (1119)
+|.+.+..|..++++++|++|++++
T Consensus 173 ~n~l~~~~p~~~~~l~~L~~L~L~~------------------------------------------------------- 197 (968)
T PLN00113 173 GNVLVGKIPNSLTNLTSLEFLTLAS------------------------------------------------------- 197 (968)
T ss_pred cCcccccCChhhhhCcCCCeeeccC-------------------------------------------------------
Confidence 4433333333333333333333333
Q ss_pred hhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccCCCCCcEEEccccccccccCcccCCCC
Q 001226 257 PWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISHCNQLQVIALSRNNLVGQIPRSVGNLS 336 (1119)
Q Consensus 257 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 336 (1119)
|++++.+|..+.++++|++|+|++|++++.+|..+..+++|++|++++|.+++.+|..+++++
T Consensus 198 -----------------n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 198 -----------------NQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred -----------------CCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 333333344444444444444444444333333333334444444444444434444444444
Q ss_pred CCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEEee
Q 001226 337 SLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALY 416 (1119)
Q Consensus 337 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 416 (1119)
+|++|++++|++++..|..+.++++|++|++++|.+.+.+|..+.++++|+.|++++|.+++..|..+..+++|+.|+++
T Consensus 261 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~ 340 (968)
T PLN00113 261 NLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLW 340 (968)
T ss_pred CCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECc
Confidence 44444444444444444444444444444444444444444444444444444444444444444334444444444444
Q ss_pred cccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceeeCccCCccccccccceeeccCccccCC
Q 001226 417 NNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGS 496 (1119)
Q Consensus 417 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~ 496 (1119)
+|.+++.+|..+..+++|+.| ++++|++++.+|..++.+.+|+.|++++|++.+.
T Consensus 341 ~n~l~~~~p~~l~~~~~L~~L-------------------------~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~ 395 (968)
T PLN00113 341 SNKFSGEIPKNLGKHNNLTVL-------------------------DLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGE 395 (968)
T ss_pred CCCCcCcCChHHhCCCCCcEE-------------------------ECCCCeeEeeCChhHhCcCCCCEEECcCCEeccc
Confidence 444433333333333333333 3333333333444444444444444444444444
Q ss_pred CCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCc
Q 001226 497 FPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNL 576 (1119)
Q Consensus 497 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 576 (1119)
+|..++.+++|+.|++++|++++ .+|..|..+++|+.|+|++|++++.+|..+..+
T Consensus 396 ~p~~~~~~~~L~~L~L~~n~l~~------------------------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 451 (968)
T PLN00113 396 IPKSLGACRSLRRVRLQDNSFSG------------------------ELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM 451 (968)
T ss_pred CCHHHhCCCCCCEEECcCCEeee------------------------ECChhHhcCCCCCEEECcCCcccCccChhhccC
Confidence 44445555555555555554444 444444445555555555555555555555555
Q ss_pred ccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCCeeEccCccCccCCCccccccccccEeec
Q 001226 577 ENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSGAIPDAFSSVQSLFELQL 656 (1119)
Q Consensus 577 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 656 (1119)
++|+.|+|++|++.+.+|..+ ..++|+.|||++|++++.+|..+..+++|+.|+|++|++++.+|..|.++++|+.
T Consensus 452 ~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~--- 527 (968)
T PLN00113 452 PSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVS--- 527 (968)
T ss_pred CCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCE---
Confidence 566666666666655555544 2466677777777777666766767777777777777777777777766666665
Q ss_pred CCcccCCCccccchhhccccceeeeccccccCCcccccccccccceeeccCceecccCCccccccccceEEecccccccc
Q 001226 657 GSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQILDLSSNSFSGEIPTEVNNMVSLYFVNISFNHFSG 736 (1119)
Q Consensus 657 ~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~l~~l~ls~N~~~g 736 (1119)
|++++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+.+|+.+|+++|+++|
T Consensus 528 ----------------------L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 528 ----------------------LDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred ----------------------EECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 5556666667788888889999999999999999999999999999999999999999
Q ss_pred cCCCccccccccCCccccCCcccccCC------CCCCCCCCcccceeeehhhHHHHHHHHHHHhheeeEEEEeccc---c
Q 001226 737 KLPASWTTLMVSYPGSFLGNSELCRQG------NCGKNGRGHTRGRLAGIIIGVLLSVALLCALIYIMVVRVLRSK---C 807 (1119)
Q Consensus 737 ~~p~~~~~~~~~~~~~~~~n~~~c~~~------~c~~~~~~~~~~~~~~ii~~~~~~v~~~~~~~~~~~~r~~r~~---~ 807 (1119)
.+|+. +.+.++.+.+|.||+.+|+.. .|...++......+++++++++++++++++ +++++|+++.. +
T Consensus 586 ~~p~~-~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 662 (968)
T PLN00113 586 SLPST-GAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAF--GFVFIRGRNNLELKR 662 (968)
T ss_pred eCCCc-chhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHH--HHHHHHhhhcccccc
Confidence 99975 666677889999999999852 453221111111122222222222222222 12222222111 1
Q ss_pred cCCCccccccccccCCCCCCCCHHHH-HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCC
Q 001226 808 FSDPSLLQDVQSRSEDLPRDLRYEDV-IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRH 886 (1119)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h 886 (1119)
........+.........+.++++++ ..+...++||+|+||.||+|.+..+++.||||+++........|++.+++++|
T Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~H 742 (968)
T PLN00113 663 VENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQH 742 (968)
T ss_pred cccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCC
Confidence 11110001111111112233455554 34556689999999999999998889999999997665555678999999999
Q ss_pred CCEEEEeeeeecCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEe
Q 001226 887 RNILRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILL 966 (1119)
Q Consensus 887 ~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill 966 (1119)
||||+++++|.+++..|+||||+++|+|.++++. ++|.++.+++.|+++|++|||+.+.++|+|||+||+||++
T Consensus 743 pnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~ 816 (968)
T PLN00113 743 PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII 816 (968)
T ss_pred CCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE
Confidence 9999999999999999999999999999999963 7899999999999999999997767799999999999999
Q ss_pred CCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCcee
Q 001226 967 DSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIV 1046 (1119)
Q Consensus 967 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 1046 (1119)
+.++.+++. ||.+..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||+...+......
T Consensus 817 ~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~ 889 (968)
T PLN00113 817 DGKDEPHLR-LSLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIV 889 (968)
T ss_pred CCCCceEEE-ecccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHH
Confidence 999888875 665543221 1223678999999999999999999999999999999999999976555555555
Q ss_pred ehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1047 TWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
.|.+..... .....++++.+......+.....++.+++.+||+.+|++||+|+|++++|+++.+...
T Consensus 890 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 890 EWARYCYSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred HHHHHhcCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 555443222 2234455555543333345566688999999999999999999999999999876443
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.7e-61 Score=626.34 Aligned_cols=496 Identities=36% Similarity=0.551 Sum_probs=331.9
Q ss_pred CceEEEecCCCcccccCccchhhhccCCcccEEEcCCCcccCCCCcccccCCCccEEEcccccccccCCccccccCccCE
Q 001226 69 SSLKALNLSGFGLSGVLNNSISYICKNQHLLSLDLSGNEFTGSIPKQLGNCGQLKTLLLNDNRFQGSIPPEIFKLKRLSW 148 (1119)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~~~~~~l~~l~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~ 148 (1119)
.+++.|+|+++.+.|.+|.. .+..+++|++|+|++|.++|.+|. +.+++|++|+|++|.+++.+|..++.+++|++
T Consensus 93 ~~L~~L~Ls~n~~~~~ip~~--~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 168 (968)
T PLN00113 93 PYIQTINLSNNQLSGPIPDD--IFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKV 168 (968)
T ss_pred CCCCEEECCCCccCCcCChH--HhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCE
Confidence 46899999999999888754 244789999999999999998886 57899999999999999999999999999999
Q ss_pred EEccCccccCCCCcccccccccceeeecccccccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccc
Q 001226 149 LDLGYNSLSGKIPPQVSLCYSLESIGFHNNFLNGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFV 228 (1119)
Q Consensus 149 L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~ 228 (1119)
|||++|.+.+.+|..++++++|++|++++|.+++.+|..++++++|++|++++|++++.+|
T Consensus 169 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p------------------- 229 (968)
T PLN00113 169 LDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIP------------------- 229 (968)
T ss_pred EECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCC-------------------
Confidence 9999999999999999999999999999999999999999999999999998887764322
Q ss_pred cCccccccCCCCCcEEEccCCccCCccChhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccc
Q 001226 229 GSLPTSLSNCRNLVEFSASSNNFGGAISPWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQI 308 (1119)
Q Consensus 229 ~~lp~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 308 (1119)
..+.++++|++|++++|++++.+|..+.++++|++|++++|++.+..|..+
T Consensus 230 -----------------------------~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l 280 (968)
T PLN00113 230 -----------------------------YEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSI 280 (968)
T ss_pred -----------------------------hhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhH
Confidence 234456778888888888888888888888888888888888877777777
Q ss_pred cCCCCCcEEEccccccccccCcccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccce
Q 001226 309 SHCNQLQVIALSRNNLVGQIPRSVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEV 388 (1119)
Q Consensus 309 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~ 388 (1119)
..+++|++|+|++|.+.+.+|..+.++++|+.|++++|.+++..|..+..+++|+.|++++|.+++.+|..+..+++|+.
T Consensus 281 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~ 360 (968)
T PLN00113 281 FSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTV 360 (968)
T ss_pred hhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcE
Confidence 77777777777777777667776777777777777777766666666666666666666666666666666666666666
Q ss_pred eeccCccccCCCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccce
Q 001226 389 LYLFNNRIEGAIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNS 468 (1119)
Q Consensus 389 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 468 (1119)
|++++|++++..|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|+++
T Consensus 361 L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~----------------------- 417 (968)
T PLN00113 361 LDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFS----------------------- 417 (968)
T ss_pred EECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEee-----------------------
Confidence 666666666555555555555555555555555555555555555555544444444
Q ss_pred eeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCcc
Q 001226 469 FYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPV 548 (1119)
Q Consensus 469 l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 548 (1119)
+.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+ ..++|+.||+++|++++.+|..
T Consensus 418 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~ 494 (968)
T PLN00113 418 --GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRK 494 (968)
T ss_pred --eECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChh
Confidence 4444444444555555555555555555555555555555555555555444433 2234444444444444444444
Q ss_pred ccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCC
Q 001226 549 FGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQ 628 (1119)
Q Consensus 549 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 628 (1119)
+..+++|++|+|++|++++.+|..++++++|++|+|++|+++|.+|..+..+++|+.|||++|+++|.+|..+..++.|+
T Consensus 495 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 574 (968)
T PLN00113 495 LGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLV 574 (968)
T ss_pred hhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccC
Confidence 44444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred eeEccCccCccCCC
Q 001226 629 SLSLQENNLSGAIP 642 (1119)
Q Consensus 629 ~L~L~~N~l~~~~p 642 (1119)
.|++++|+++|.+|
T Consensus 575 ~l~ls~N~l~~~~p 588 (968)
T PLN00113 575 QVNISHNHLHGSLP 588 (968)
T ss_pred EEeccCCcceeeCC
Confidence 44444444444444
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-44 Score=405.25 Aligned_cols=284 Identities=40% Similarity=0.678 Sum_probs=239.4
Q ss_pred CCCCCCHHHHHHhhCC----ceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeee
Q 001226 824 LPRDLRYEDVIRATEG----RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGS 895 (1119)
Q Consensus 824 ~~~~~~~~~~~~~~~~----~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~ 895 (1119)
..+.|++.++.++|.. +.||+|+||.||+|...+ +..||||++... ..+|.+|+.++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4567899999988854 799999999999999887 489999988542 3569999999999999999999999
Q ss_pred eecCC-ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEE
Q 001226 896 CTKDE-HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKI 974 (1119)
Q Consensus 896 ~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl 974 (1119)
|.+++ +.++|||||++|+|.++++..... .++|..+.+||.++|+||+|||+.+.+.||||||||+|||+|+++++||
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 99998 499999999999999999987644 6899999999999999999999999889999999999999999999999
Q ss_pred EeccccccccCCCCCCccccc-ccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC-CCCCceeehhhhh
Q 001226 975 GDFGMSKLISDSHSSSTRSAI-VGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSF-GEDTDIVTWTRWK 1052 (1119)
Q Consensus 975 ~DfGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~-~~~~~~~~~~~~~ 1052 (1119)
+|||+|+..... ....... .||.+|+|||+...+..+.++|||||||++.|+++|+.|.+... .....++.|....
T Consensus 219 sDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 219 SDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred cCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 999999655431 1111112 79999999999999999999999999999999999999988654 2333467776444
Q ss_pred hcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1053 LQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
... ....+++|+.+............++..++.+|++.+|.+||+|.||+++|+.+...
T Consensus 297 ~~~-~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 297 LEE-GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHC-cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 433 37888999998632222225667799999999999999999999999999776544
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=372.99 Aligned_cols=255 Identities=28% Similarity=0.417 Sum_probs=211.0
Q ss_pred CCCHHHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-----ccccHHHHHHHHhhcCCCCEEEEeeeeecCCc
Q 001226 827 DLRYEDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-----SETNFDVEIRTLSLVRHRNILRIVGSCTKDEH 901 (1119)
Q Consensus 827 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 901 (1119)
.+...|+++ .+.||+|..|+||+++++.+++.+|+|++.. ...++.+|+++++..+||+||+++|+|...+.
T Consensus 75 ~i~~~dle~---~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 75 GISLSDLER---LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE 151 (364)
T ss_pred ccCHHHhhh---hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence 355566644 4679999999999999999999999999932 23567899999999999999999999999984
Q ss_pred -eEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccc
Q 001226 902 -GFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMS 980 (1119)
Q Consensus 902 -~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla 980 (1119)
.+++||||++|+|.+++...+ .+++....+++.++++||.|||+.+ +||||||||+|||+++.|+|||+|||.+
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEecccccc
Confidence 999999999999999998765 4899999999999999999999632 9999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccc
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECI 1060 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1119)
+.+.+. .....+||..|||||.+.+..|+.++||||||++++|+.+|+.||.+......+.... +.
T Consensus 227 ~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L----------l~ 292 (364)
T KOG0581|consen 227 GILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL----------LC 292 (364)
T ss_pred HHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH----------HH
Confidence 887653 4456799999999999999999999999999999999999999997651111121111 11
Q ss_pred ccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 CFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+++...+.... ...+.++..++..|+++||.+||+++|+++|
T Consensus 293 ~Iv~~ppP~lP~--~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 293 AIVDEPPPRLPE--GEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHhcCCCCCCCc--ccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 222211111111 1345678999999999999999999999986
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=387.05 Aligned_cols=254 Identities=36% Similarity=0.517 Sum_probs=207.8
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC-ceEEEEecc
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE-HGFIVTEYM 909 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~~ 909 (1119)
...+.+|+|+||+||+|.++.+ ..||||++... ..+|.+|+.++.+++|||||+++|+|.+.. ..++||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 3445699999999999999862 33999999643 247999999999999999999999999887 799999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEecCCCCCCeEeCCCC-ceEEEeccccccccCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQ-IIHRDIKSDNILLDSEL-EPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlkp~Nill~~~~-~vkl~DfGla~~~~~~~ 987 (1119)
++|+|.++++.. ....+++..+.+++.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 999999999885 234699999999999999999999999 7 99999999999999998 99999999998765422
Q ss_pred CCCcccccccCCCcccccccC--CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAY--STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
...+...||+.|||||++. ...|+.++||||||+++|||+||+.||..... .......... ...+
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~~---------~~Rp 265 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVVG---------GLRP 265 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhc---------CCCC
Confidence 2334478999999999999 66999999999999999999999999976532 1111100000 0001
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
.+ +......+..++.+||+.||++||++.+++..|+.+.....
T Consensus 266 ~~------p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 266 PI------PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CC------CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 11 11145678899999999999999999999999998876544
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-43 Score=371.15 Aligned_cols=248 Identities=27% Similarity=0.379 Sum_probs=208.0
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
.|...+.+|+|+||.|-+|..+.+|+.||||++++. ...+.+|+++|++++|||||+++++|+.++..|
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y 252 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY 252 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence 456679999999999999999999999999998432 223579999999999999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC---CceEEEecccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE---LEPKIGDFGMS 980 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~vkl~DfGla 980 (1119)
+||||++||+|.+.+-.++. +.+...+.+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+|
T Consensus 253 mVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 253 MVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred EEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchh
Confidence 99999999999999988763 77788899999999999999999 99999999999999766 67899999999
Q ss_pred ccccCCCCCCcccccccCCCcccccccCCCC--C-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccc
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAYSTR--L-TEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENH 1057 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1119)
+..+. .......+||+.|.|||++.++. + ..++|+||+|||+|-+++|..||....++.....
T Consensus 327 K~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~e----------- 392 (475)
T KOG0615|consen 327 KVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKE----------- 392 (475)
T ss_pred hcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHH-----------
Confidence 98764 34456789999999999987654 3 3488999999999999999999986544332111
Q ss_pred cccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1058 ECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+...++.+......+.+.+..+++.+||..||++|||++|+++|
T Consensus 393 ---QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 393 ---QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred ---HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 122233333334445667788999999999999999999999875
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-42 Score=385.16 Aligned_cols=245 Identities=26% Similarity=0.403 Sum_probs=209.7
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
.+|..++.||+|||+.||++++.++|+.||+|++.+ ..+.+.+||++-+.++|||||+++++|++...+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 578899999999999999999999999999999853 2355788999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
|+|+.++|.+++++++ .+++.+++.+++||+.|+.|||+. +|+|||||..|++++++.+|||+|||+|..+...
T Consensus 98 ELC~~~sL~el~Krrk---~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK---PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999999654 599999999999999999999999 9999999999999999999999999999988643
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
.......+|||-|.|||++....++..+||||+|||+|-|+.|++||+...-. ..+.+.+ ...+
T Consensus 172 --~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk----ety~~Ik-~~~Y--------- 235 (592)
T KOG0575|consen 172 --GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK----ETYNKIK-LNEY--------- 235 (592)
T ss_pred --ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH----HHHHHHH-hcCc---------
Confidence 23455679999999999999999999999999999999999999999742100 0111111 0111
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+...+....++|.++|+.+|.+|||+++|+.+
T Consensus 236 -----~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 236 -----SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -----ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1122344567899999999999999999999975
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=382.34 Aligned_cols=257 Identities=31% Similarity=0.489 Sum_probs=215.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc---ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR---SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
..+..+.||+|.||.||.|.+.. ...||+|.++. ..++|.+|+.+|++++|++||+++++|..++.+|||||||+.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 33445789999999999999986 45789998864 346799999999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+|++... +..+...+.+.++.|||+||+||+++ ++|||||+++||||+++..|||+|||+|+...+ +.+..
T Consensus 286 GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d-~~Y~~ 360 (468)
T KOG0197|consen 286 GSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGD-DEYTA 360 (468)
T ss_pred CcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCC-Cceee
Confidence 99999999833 33588889999999999999999999 999999999999999999999999999996555 33444
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.....-++.|.|||.+..+.++.+||||||||++|||+| |+.||..+... .+.+.+++..+..
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~----------------ev~~~le~GyRlp 424 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE----------------EVLELLERGYRLP 424 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH----------------HHHHHHhccCcCC
Confidence 445566889999999999999999999999999999997 89998754211 1222222222221
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCCC
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNEG 1115 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 1115 (1119)
.+..++..+.++|..||+.+|++|||++.+...++++....++
T Consensus 425 --~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~~~ 467 (468)
T KOG0197|consen 425 --RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTSTEG 467 (468)
T ss_pred --CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcccC
Confidence 2334567889999999999999999999999999999887654
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-42 Score=364.11 Aligned_cols=197 Identities=32% Similarity=0.501 Sum_probs=178.4
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+.+|...+.||+|+||+||+|+++.++..||||.+... .+....|+.+++.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 34566677899999999999999999999999988544 234678999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC------CceEEEecccc
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE------LEPKIGDFGMS 980 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~------~~vkl~DfGla 980 (1119)
|||.||+|.+|++.++ .+++..++.++.|+|.|+++||++ +||||||||+|||++.. -.+||+|||+|
T Consensus 89 EyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999999876 499999999999999999999999 99999999999999875 45799999999
Q ss_pred ccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPS 1038 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~ 1038 (1119)
+.+.. .......+|++-|||||++...+|+.|+|+||+|+++|++++|+.||+..
T Consensus 163 R~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 163 RFLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hhCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 98864 33445678999999999999999999999999999999999999999743
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-41 Score=393.22 Aligned_cols=256 Identities=29% Similarity=0.456 Sum_probs=217.6
Q ss_pred CceeeecCCccEEEEEeCC-----CceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 839 GRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
.+.||+|+||+||+|+... ....||||.++... .+|++|++.+..++|||||+++|+|.+++..++|+||
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEY 570 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEY 570 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEe
Confidence 3789999999999998543 34679999997543 4699999999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEec
Q 001226 909 MPGGTLFNVLHQNEPR-----------LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDF 977 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~Df 977 (1119)
|..|||.++|+.+.+. ..++..+.+.||.|||.||.||.++ .+|||||+.+|+||.++..|||+||
T Consensus 571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKIsDf 647 (774)
T KOG1026|consen 571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKISDF 647 (774)
T ss_pred cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEeccc
Confidence 9999999999865431 2378889999999999999999999 8999999999999999999999999
Q ss_pred cccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccc
Q 001226 978 GMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQEN 1056 (1119)
Q Consensus 978 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1056 (1119)
|+++.+...+++.......-+++|||||.+..++|+.+|||||||||+||+++ |+-||++...+ ++....+
T Consensus 648 GLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--EVIe~i~------ 719 (774)
T KOG1026|consen 648 GLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--EVIECIR------ 719 (774)
T ss_pred ccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--HHHHHHH------
Confidence 99999888788777767788999999999999999999999999999999996 99999865322 1111111
Q ss_pred ccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCCC
Q 001226 1057 HECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNEG 1115 (1119)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 1115 (1119)
++.+ -+-+...+.++++||.+||+.+|.+||+++||-..|++.-+..++
T Consensus 720 -------~g~l---L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 720 -------AGQL---LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred -------cCCc---ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 1111 123345677899999999999999999999999999998776654
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.5e-41 Score=342.20 Aligned_cols=262 Identities=21% Similarity=0.250 Sum_probs=200.1
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccccc------HHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETN------FDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~------~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|+..-++|+|+||+||+++++++|+.||||++...+++ ..+|++++++++|+|+|.++++|...+..++|+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 455557899999999999999999999999999655442 46899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
|+.. +.+-+.+.+. .++.+.++++++|++.|+.|+|++ ++|||||||+||+++.+|.+|++|||+|+.+.. +
T Consensus 83 ~dhT-vL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--p 154 (396)
T KOG0593|consen 83 CDHT-VLHELERYPN--GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA--P 154 (396)
T ss_pred cchH-HHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC--C
Confidence 9764 4444555443 488999999999999999999999 999999999999999999999999999998864 2
Q ss_pred CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehh----------hhhhcccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWT----------RWKLQENH 1057 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~----------~~~~~~~~ 1057 (1119)
....+..+.|.+|+|||.+.+ .+|+.++||||+||++.||++|..-|.+. .+.+.+.... ........
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~-SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR-SDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc-chHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 334455688999999998887 78999999999999999999999666443 2222111110 00001111
Q ss_pred cccccccccccCCCch---HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1058 ECICFLDREISFWDSD---DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1058 ~~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
-+..+.-+.......- -.....-+.+++.+|++.||++|++-+|++.|
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 1111111111111011 11223468899999999999999999998864
No 12
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.4e-45 Score=382.67 Aligned_cols=488 Identities=28% Similarity=0.385 Sum_probs=332.1
Q ss_pred CCcccEEEcCCCcccCCCCcccccCCCccEEEcccccccccCCccccccCccCEEEccCccccCCCCcccccccccceee
Q 001226 95 NQHLLSLDLSGNEFTGSIPKQLGNCGQLKTLLLNDNRFQGSIPPEIFKLKRLSWLDLGYNSLSGKIPPQVSLCYSLESIG 174 (1119)
Q Consensus 95 l~~l~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 174 (1119)
-..++.|++++|.++ .+-..+.++..|.+|++++|++. ..|++++.+..++.|+.++|+++ ++|..++.+.+|.+|+
T Consensus 44 qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 44 QVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLD 120 (565)
T ss_pred hcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhh
Confidence 357788888888887 66677888889999999999887 67888999999999999999888 7788877777777777
Q ss_pred ecccccccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCCCCCcEEEccCCccCCc
Q 001226 175 FHNNFLNGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNCRNLVEFSASSNNFGGA 254 (1119)
Q Consensus 175 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i~~~ 254 (1119)
+++|.+. +.|.+++.+..|..|+..+|+++ ++|..+.++.+|..+++.+
T Consensus 121 ~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~------------------------slp~~~~~~~~l~~l~~~~------ 169 (565)
T KOG0472|consen 121 CSSNELK-ELPDSIGRLLDLEDLDATNNQIS------------------------SLPEDMVNLSKLSKLDLEG------ 169 (565)
T ss_pred cccccee-ecCchHHHHhhhhhhhccccccc------------------------cCchHHHHHHHHHHhhccc------
Confidence 7777776 56666777777777777777776 3344444444444444444
Q ss_pred cChhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccCCCCCcEEEccccccccccCcccCC
Q 001226 255 ISPWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISHCNQLQVIALSRNNLVGQIPRSVGN 334 (1119)
Q Consensus 255 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 334 (1119)
|+++...|+.+. ++.|++||..+|-++ .+|..++.+.+|..|+|.+|++. ..| .|.+
T Consensus 170 -------------------n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~g 226 (565)
T KOG0472|consen 170 -------------------NKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPG 226 (565)
T ss_pred -------------------cchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCc
Confidence 444433333333 444555555444444 23334444444444444445544 445 5777
Q ss_pred CCCCCeEEccCCcccCCCCCCC-CCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEE
Q 001226 335 LSSLNSLLLFNNRLQGTLPPEL-GNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVEL 413 (1119)
Q Consensus 335 l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 413 (1119)
++.|++|+++.|+|+ .+|... .+++++..|||.+|+++ ..|+.++-+++|++||+++|.|+ ..|..++++ +|+.|
T Consensus 227 cs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L 302 (565)
T KOG0472|consen 227 CSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFL 302 (565)
T ss_pred cHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeeh
Confidence 777777777777777 444443 47777777777777777 77777888888888888888887 455567777 77888
Q ss_pred EeecccccccCCccccCCC---CcCEEE--ccCccCcccchhhhhccCCccceeccccceeeCccCCccccccccceeec
Q 001226 414 ALYNNRLTGRIPPDITRLR---NLQFLS--LAHNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVL 488 (1119)
Q Consensus 414 ~L~~N~l~~~~~~~~~~l~---~L~~L~--L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L 488 (1119)
.+.+|.+.. +-.++-+.. -|++|. +..-.++.. ..-.. ..-++ .. ..-.......+.+.|++
T Consensus 303 ~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~s--e~~~e-----~~~t~----~~-~~~~~~~~~i~tkiL~~ 369 (565)
T KOG0472|consen 303 ALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQS--EGGTE-----TAMTL----PS-ESFPDIYAIITTKILDV 369 (565)
T ss_pred hhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCC--ccccc-----ccCCC----CC-Ccccchhhhhhhhhhcc
Confidence 888887752 222221111 011111 000011100 00000 00000 00 01112234456777888
Q ss_pred cCccccCCCCcccccccc---ccEEEeccCccccCCCccccCCCCccee-eccCcccCCCCCccccccccceEEeccCCc
Q 001226 489 GNNRFNGSFPIEIGKCSS---LRRVILSNNLLQGSLPATLERNPGVSFL-DVRGNLLQGSIPPVFGFWSNLTMLDFSENR 564 (1119)
Q Consensus 489 ~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 564 (1119)
+.-+++ .+|.++..... .+..+++.|++. .+|..+..+..+.+. ++++|.+ +-+|..+..+++|..|+|++|-
T Consensus 370 s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~ 446 (565)
T KOG0472|consen 370 SDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNL 446 (565)
T ss_pred cccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccch
Confidence 888887 56665544433 777888888887 677777777766554 4444444 4788888889999999999999
Q ss_pred ccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCCeeEccCccCccCCCcc
Q 001226 565 LSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSGAIPDA 644 (1119)
Q Consensus 565 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 644 (1119)
+. .+|.+++.+..|++|++|.|+|. .+|..+-.+..++.+-.++|++....|..+.+|.+|..|||.+|.+. ++|..
T Consensus 447 Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~ 523 (565)
T KOG0472|consen 447 LN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPI 523 (565)
T ss_pred hh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChh
Confidence 87 88999999999999999999998 78988888888888888889997555555999999999999999998 78999
Q ss_pred ccccccccEeecCCcccC
Q 001226 645 FSSVQSLFELQLGSNIFD 662 (1119)
Q Consensus 645 ~~~l~~L~~L~L~~N~l~ 662 (1119)
+++|++|++|++.+|+|.
T Consensus 524 LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 524 LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hccccceeEEEecCCccC
Confidence 999999999999999997
No 13
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.1e-44 Score=375.49 Aligned_cols=483 Identities=28% Similarity=0.392 Sum_probs=398.4
Q ss_pred ccCCCCCcEEEccCCccCCccChhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccCCCCC
Q 001226 235 LSNCRNLVEFSASSNNFGGAISPWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISHCNQL 314 (1119)
Q Consensus 235 l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 314 (1119)
...-..|+.+.+++|.+.. ......++..|.+|++.+|++. ..|.+++.+.+++.|+.++|++. ..|..+..+.+|
T Consensus 41 wW~qv~l~~lils~N~l~~--l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l 116 (565)
T KOG0472|consen 41 WWEQVDLQKLILSHNDLEV--LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISL 116 (565)
T ss_pred hhhhcchhhhhhccCchhh--ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhh
Confidence 3444567788888888752 2345678889999999999999 68889999999999999999998 677788999999
Q ss_pred cEEEccccccccccCcccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCc
Q 001226 315 QVIALSRNNLVGQIPRSVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNN 394 (1119)
Q Consensus 315 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N 394 (1119)
+.++.++|.+. ..|+.++.+..|+.|+..+|+++ ..|+.+.++.+|..|++.+|++... |+..-+++.|+.||...|
T Consensus 117 ~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N 193 (565)
T KOG0472|consen 117 VKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSN 193 (565)
T ss_pred hhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchh
Confidence 99999999998 78889999999999999999999 7888999999999999999999955 444445999999999999
Q ss_pred cccCCCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceeeCccC
Q 001226 395 RIEGAIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIP 474 (1119)
Q Consensus 395 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 474 (1119)
-++ .+|..++.+.+|..|+|.+|++. ..| +|.+++.|+.|+++.|+|. .+|.+..++++++..|||..|+++ ..|
T Consensus 194 ~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~P 268 (565)
T KOG0472|consen 194 LLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVP 268 (565)
T ss_pred hhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCc
Confidence 998 67778999999999999999998 667 8999999999999999998 889999999999999999999998 789
Q ss_pred CccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCC--Ccceee-------ccCcc----c
Q 001226 475 ANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNP--GVSFLD-------VRGNL----L 541 (1119)
Q Consensus 475 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~-------l~~N~----l 541 (1119)
+.+|.+.+|..||+|+|.|+ .+|..++++ .|+.|-+.+|++...-.+.+.+-+ -|++|. ++.-+ -
T Consensus 269 de~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~ 346 (565)
T KOG0472|consen 269 DEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTET 346 (565)
T ss_pred hHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccc
Confidence 99999999999999999999 789999999 999999999998632111111100 011111 01000 0
Q ss_pred CCC-CC---ccccccccceEEeccCCcccCCCCCccCCccc---ccEEEcccCcccCcCCcccccCCCCc-EEeccCccc
Q 001226 542 QGS-IP---PVFGFWSNLTMLDFSENRLSGSIPSELGNLEN---LQILRLSANKLDGRIPYELGKCTKMI-KLDLSDNYL 613 (1119)
Q Consensus 542 ~~~-~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l 613 (1119)
.+. .+ .......+.++|+++.-+++ .+|++...-.. .+..+++.|++. ++|..+..+..+. .+++++|.+
T Consensus 347 ~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i 424 (565)
T KOG0472|consen 347 AMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI 424 (565)
T ss_pred cCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc
Confidence 001 11 12234567889999999998 77776544444 788999999998 7888777776654 456666666
Q ss_pred cccCChhhhhcccCCeeEccCccCccCCCccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCcccc
Q 001226 614 AGSIPSEVISLEKMQSLSLQENNLSGAIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPEC 693 (1119)
Q Consensus 614 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~ 693 (1119)
+ .+|..+..+++|..|+|++|.+. .+|..++.+..|+.||++.|.|. .+|..+..+..+. .+-.++|++....|..
T Consensus 425 s-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lE-tllas~nqi~~vd~~~ 500 (565)
T KOG0472|consen 425 S-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLE-TLLASNNQIGSVDPSG 500 (565)
T ss_pred c-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHH-HHHhccccccccChHH
Confidence 5 89999999999999999999887 89999999999999999999997 7887776666554 3557889998666666
Q ss_pred cccccccceeeccCceecccCCccccccccceEEecccccccccCCC
Q 001226 694 LGNLDKLQILDLSSNSFSGEIPTEVNNMVSLYFVNISFNHFSGKLPA 740 (1119)
Q Consensus 694 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~l~~l~ls~N~~~g~~p~ 740 (1119)
+.++.+|..|||.+|-+. .||+.+++|++|+.|++++|+|. .|.
T Consensus 501 l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr--~Pr 544 (565)
T KOG0472|consen 501 LKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR--QPR 544 (565)
T ss_pred hhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC--CCH
Confidence 999999999999999998 89999999999999999999998 554
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-41 Score=339.36 Aligned_cols=258 Identities=24% Similarity=0.341 Sum_probs=206.7
Q ss_pred HHHHhhCCceeeecCCccEEEEEeCCCceEEEEEecc------cccccHHHHHHHHhhcCCCCEEEEee-eeecCCc-eE
Q 001226 832 DVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLN------RSETNFDVEIRTLSLVRHRNILRIVG-SCTKDEH-GF 903 (1119)
Q Consensus 832 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~------~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~ 903 (1119)
.+..|.+.++||+|.||+||++....+|..||.|.++ +..++...|+.+++.++|||||++++ .+.++.. .+
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 3456777789999999999999999999999999884 33456778999999999999999999 4555544 89
Q ss_pred EEEeccCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEecCCCCCCeEeCCCCceEEEeccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVP-QIIHRDIKSDNILLDSELEPKIGDFGMSK 981 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~vkl~DfGla~ 981 (1119)
+|||++.+|+|...++..+ .+..+++..++++..|+++|+.++|+.... .|+||||||.||+++.+|.||++|||+++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 9999999999999987643 345699999999999999999999984221 38999999999999999999999999999
Q ss_pred cccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 982 LISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 982 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
...... ......+|||.||+||.+.+..|++++||||+||++|||+.-+.||.+. ......+...
T Consensus 177 ~l~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~-------- 241 (375)
T KOG0591|consen 177 FLSSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIE-------- 241 (375)
T ss_pred Hhcchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHH--------
Confidence 886432 2334578999999999999999999999999999999999999999753 1111111111
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
..+.+ +-.+.-++.++..++..|+.+||+.||+.-.+++.+..
T Consensus 242 --qgd~~--~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 242 --QGDYP--PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred --cCCCC--CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 11111 11235567889999999999999999995555544443
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=348.92 Aligned_cols=246 Identities=25% Similarity=0.370 Sum_probs=202.7
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
..++...++||+|+||+||+++.+++++.+|+|++++. .+...+|..++.+++||.||++...|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 34556779999999999999999999999999999643 35578899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
+||+.||.|...+.+.+ .+++..++-++..|+.||.|||+. +|||||+||+|||+|++|+++++|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999998765 489999999999999999999999 999999999999999999999999999985433
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
. .......+||+.|||||++.+..|+.++|.||+|+++|||++|..||... +...+.......
T Consensus 178 ~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-----~~~~~~~~I~~~---------- 240 (357)
T KOG0598|consen 178 D--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-----DVKKMYDKILKG---------- 240 (357)
T ss_pred C--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-----cHHHHHHHHhcC----------
Confidence 2 22334579999999999999999999999999999999999999999753 111111111111
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCC----CHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRP----SMREVVG 1104 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP----s~~ell~ 1104 (1119)
+.. ..+.-.+.+..+++.+.++.||++|. ++++|.+
T Consensus 241 k~~---~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 241 KLP---LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred cCC---CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 111 01111244678999999999999996 4555443
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=357.73 Aligned_cols=259 Identities=22% Similarity=0.302 Sum_probs=207.7
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccccc-----cHHHHHHHHhhcC-CCCEEEEeeeeecCC-ceEEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSET-----NFDVEIRTLSLVR-HRNILRIVGSCTKDE-HGFIV 905 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lV 905 (1119)
..+|+..++||.|.||.||+|....++..||||++++.-. .-.+|++.++++. |||||++.+++.+.+ ..|+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4688888999999999999999999999999999975432 2357999999998 999999999999887 89999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||| ..+|++.+++++ ..+++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+.+..
T Consensus 89 fE~M-d~NLYqLmK~R~--r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 89 FEFM-DCNLYQLMKDRN--RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred HHhh-hhhHHHHHhhcC--CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc
Confidence 9999 569999999873 4699999999999999999999999 999999999999999999999999999997754
Q ss_pred CCCCCcccccccCCCcccccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC-----------ceeehhhhhh
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAY-STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT-----------DIVTWTRWKL 1053 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-----------~~~~~~~~~~ 1053 (1119)
. ...+..+.|.+|+|||++. .+.|+.+.||||+|||++|+.+-+.-|.+..+-+. +...|..
T Consensus 163 k---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e--- 236 (538)
T KOG0661|consen 163 K---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE--- 236 (538)
T ss_pred C---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh---
Confidence 3 3344568899999999765 67899999999999999999998877765322111 0111111
Q ss_pred cccccccccccccccCCCchH-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1054 QENHECICFLDREISFWDSDD-----QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....+..+.-+++.....+ ...+.++.+++.+|+++||++||||+|.+++
T Consensus 237 --g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 237 --GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred --HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1122222222222221111 1245678999999999999999999999886
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-40 Score=359.01 Aligned_cols=246 Identities=26% Similarity=0.412 Sum_probs=206.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+|..++.||+|+|++||+|+.+.+++.||||++.+ ...-+.+|-.+|.++ .||.|++++..|.++..+|+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 44557789999999999999999999999999843 234467888899999 7999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++|+|.+++++.+ .+++..++.++.+|+.|++|||++ |||||||||+|||+|+++++||+|||.|+.+.+.
T Consensus 154 e~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 154 EYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999999886 499999999999999999999999 9999999999999999999999999999987643
Q ss_pred CCC---------C--cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcc
Q 001226 987 HSS---------S--TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQE 1055 (1119)
Q Consensus 987 ~~~---------~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1055 (1119)
... . ....++||..|.+||.+.....++.+|+|+|||++|+|+.|..||... .+...+.
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~----NeyliFq------ 297 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA----NEYLIFQ------ 297 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc----cHHHHHH------
Confidence 221 1 125589999999999999999999999999999999999999999753 1121111
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1056 NHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+++-.+.+. ...+..+.+|+.+.+..||.+|++.++|.+|
T Consensus 298 -----kI~~l~y~fp----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 298 -----KIQALDYEFP----EGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -----HHHHhcccCC----CCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1122112111 1123567899999999999999999999987
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.3e-39 Score=323.18 Aligned_cols=260 Identities=22% Similarity=0.309 Sum_probs=202.0
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|...+++|+|.||.||+|++..+|+.||||+++..+ ....+|++.++.++|+||+.++++|.+.+...+|+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 5666688999999999999999999999999986432 2367899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
|+ .+|+..++.... .++..+++.++.++.+|++|+|++ .|+|||+||.|++++++|.+|++|||+|+.+.....
T Consensus 83 m~-tdLe~vIkd~~i--~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 83 MP-TDLEVVIKDKNI--ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred cc-ccHHHHhccccc--ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 95 689999987653 688999999999999999999999 999999999999999999999999999998875443
Q ss_pred CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce------------eehhhhhhcc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI------------VTWTRWKLQE 1055 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~------------~~~~~~~~~~ 1055 (1119)
.. ...+.|.+|+|||.+.+ +.|+..+||||.||++.||+.|..-|.+. .+-+++ ..|..+....
T Consensus 157 ~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-sDidQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 157 IQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred cc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHHcCCCCcccCccccccc
Confidence 33 33488999999998876 56999999999999999999887554332 111111 1121111111
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1056 NHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.......+..... ..--.....+..+++.+|+..||.+|++++|.+++
T Consensus 234 dY~~~~~~P~~~~--~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPL--NNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCcc--ccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0000000000000 00112345567999999999999999999999876
No 19
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-41 Score=375.76 Aligned_cols=251 Identities=29% Similarity=0.440 Sum_probs=212.9
Q ss_pred CceeeecCCccEEEEEeCCCc---eEEEEEeccc-----ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSR---KHWAVKKLNR-----SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~---~~vavK~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.++||.|.||.||+|+.+..+ ..||||.++. ...+|..|+.+|.++.||||+++.|+.......+||.|||+
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyME 713 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYME 713 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhh
Confidence 489999999999999987655 5699999964 45679999999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC-CC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH-SS 989 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~-~~ 989 (1119)
+|+|..+|+.++. .+++.+...+.++||.||+||.+. ++|||||.++|||++.+..+||+|||+++.+.++. ..
T Consensus 714 NGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ 788 (996)
T KOG0196|consen 714 NGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 788 (996)
T ss_pred CCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence 9999999999875 488999999999999999999999 99999999999999999999999999999886543 23
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHH-hCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELL-FRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.+.....-+.+|.|||.+..++++.++||||||+|+||.+ .|++||..+...+ +...++..++
T Consensus 789 ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd----------------VIkaIe~gyR 852 (996)
T KOG0196|consen 789 YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----------------VIKAIEQGYR 852 (996)
T ss_pred ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH----------------HHHHHHhccC
Confidence 3333345578999999999999999999999999999988 5999997653221 1122222222
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
. ..+.+++..+.+||..||++|-.+||.+.+|+.+|.++..+
T Consensus 853 L--PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 853 L--PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred C--CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 2 22344566889999999999999999999999999998754
No 20
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-41 Score=365.67 Aligned_cols=366 Identities=25% Similarity=0.245 Sum_probs=250.1
Q ss_pred ceeeeccccccccCcccccCCCCCcEEEccccccccccCcccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccC
Q 001226 291 QKLVLSANKLNGTISGQISHCNQLQVIALSRNNLVGQIPRSVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHN 370 (1119)
Q Consensus 291 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 370 (1119)
+.|++++|+++.+.+..|.++++|++++|.+|.++ .+|...+...+|+.|+|.+|.|+..-.+.++.++.|+.||||.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 44666666666666666666666666666666666 55654444455666666666666555566666666666666666
Q ss_pred cCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchh
Q 001226 371 FIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVAL 450 (1119)
Q Consensus 371 ~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 450 (1119)
.|+.+.-..|..-.++++|+|++|+|+....+.|..+.+|..|.|++|+++...+..|.++++|+.|+|..|+|. .+..
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-ive~ 238 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR-IVEG 238 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee-eehh
Confidence 666444445555566666666666666666666666666666777777766555555666677777777777665 2323
Q ss_pred hhhccCCccceeccccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCC
Q 001226 451 ELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPG 530 (1119)
Q Consensus 451 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 530 (1119)
--|.++++|+.|.|..|.++..-...|..+.++++|+|+.|+++..-..++.++++|+.|+||+|.|+..-+...+-.++
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftqk 318 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQK 318 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhccc
Confidence 33556666777777777666555566667777777777777777666666777777777777777777777777777777
Q ss_pred cceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCc---ccccCCCCcEEe
Q 001226 531 VSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPY---ELGKCTKMIKLD 607 (1119)
Q Consensus 531 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~ 607 (1119)
|+.|||+.|+++..-+..|..++.|++|.|++|++...-...|.++++|++|||++|.+++.+.+ .|..+++|+.|+
T Consensus 319 L~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~ 398 (873)
T KOG4194|consen 319 LKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR 398 (873)
T ss_pred ceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee
Confidence 77777777777766667777777777777777777765566777777777777777777766543 366677777788
Q ss_pred ccCccccccCChhhhhcccCCeeEccCccCccCCCccccccccccEeecCCc
Q 001226 608 LSDNYLAGSIPSEVISLEKMQSLSLQENNLSGAIPDAFSSVQSLFELQLGSN 659 (1119)
Q Consensus 608 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 659 (1119)
|.+|+|....-.+|..++.|+.|||.+|-|..+-|++|..+ .|++|-+..-
T Consensus 399 l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSS 449 (873)
T ss_pred ecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhccc
Confidence 88887774444567777778888888887777777777777 7777666443
No 21
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=359.87 Aligned_cols=367 Identities=25% Similarity=0.228 Sum_probs=276.2
Q ss_pred CcccEEEcCCCcccCCCCcccccCCCccEEEcccccccccCCccccccCccCEEEccCccccCCCCcccccccccceeee
Q 001226 96 QHLLSLDLSGNEFTGSIPKQLGNCGQLKTLLLNDNRFQGSIPPEIFKLKRLSWLDLGYNSLSGKIPPQVSLCYSLESIGF 175 (1119)
Q Consensus 96 ~~l~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 175 (1119)
+..+.||+++|.+....+..|.++++|+++++.+|.++ .||.......+|+.|+|.+|.|+..-..+++-++.|+.|||
T Consensus 78 ~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred cceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 46678999999998888888899999999999999988 78887777888999999999988777778888888888888
Q ss_pred cccccccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCCCCCcEEEccCCccCCcc
Q 001226 176 HNNFLNGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNCRNLVEFSASSNNFGGAI 255 (1119)
Q Consensus 176 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i~~~~ 255 (1119)
+.|.|+.+....|..-.++++|+|++|+|+.... ..|.++.+|..|.|+.|+++ .+
T Consensus 157 SrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~-----------------------~~F~~lnsL~tlkLsrNrit-tL 212 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKVNIKKLNLASNRITTLET-----------------------GHFDSLNSLLTLKLSRNRIT-TL 212 (873)
T ss_pred hhchhhcccCCCCCCCCCceEEeecccccccccc-----------------------ccccccchheeeecccCccc-cc
Confidence 8888886666677777788888888888874422 35666777888888888886 67
Q ss_pred ChhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccCCCCCcEEEccccccccccCcccCCC
Q 001226 256 SPWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISHCNQLQVIALSRNNLVGQIPRSVGNL 335 (1119)
Q Consensus 256 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 335 (1119)
+...|+.|++|+.|+|..|+|.-.-.-+|.++++|+.|.|.+|.|.....+.|..+.++++|+|+.|++...-..++.++
T Consensus 213 p~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgL 292 (873)
T KOG4194|consen 213 PQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGL 292 (873)
T ss_pred CHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccccccc
Confidence 77788888888888888888875546677788888888888888887777788888888888888888776666677777
Q ss_pred CCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEEe
Q 001226 336 SSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELAL 415 (1119)
Q Consensus 336 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 415 (1119)
++|+.|+||+|.|....++...-+++|++|+|++|+|+...+.+|..+..|++|+|++|+|.......|..+++|+.|||
T Consensus 293 t~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdL 372 (873)
T KOG4194|consen 293 TSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDL 372 (873)
T ss_pred chhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcC
Confidence 88888888888777777777777777777788777777666777777777777777777777666666777777777777
Q ss_pred ecccccccCCc---cccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceeeCccCCccccccccceeecc
Q 001226 416 YNNRLTGRIPP---DITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLG 489 (1119)
Q Consensus 416 ~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~ 489 (1119)
++|.++..+.+ .|.++++|+.|+|.+|+|. .++...+..++.|++|||.+|.|..+-|.+|..+ .|+.|.+.
T Consensus 373 r~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 373 RSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred cCCeEEEEEecchhhhccchhhhheeecCceee-ecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 77777654443 3556666666666666666 5666666666666666666666665555555554 55555443
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=357.82 Aligned_cols=246 Identities=28% Similarity=0.389 Sum_probs=208.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.|+..++||+|+.|.||.|....+++.||||++... ++-+.+|+.+|+..+|+|||.+++.|..++..|+|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 456668899999999999999999999999999532 3447789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
||+|.|.+.... +++.+++.|++++++||+|||.+ ||+|||||.+|||++.+|.+||+|||++..+.... .
T Consensus 354 ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--~ 424 (550)
T KOG0578|consen 354 GGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--S 424 (550)
T ss_pred CCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccccc--C
Confidence 999999998764 89999999999999999999999 99999999999999999999999999998776533 3
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.+...+||+.|||||+.....|++++||||+|++.+||+-|+.||-.. ..-.+. +..+.--.+.+
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE---~PlrAl---------yLIa~ng~P~l--- 489 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE---NPLRAL---------YLIATNGTPKL--- 489 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC---ChHHHH---------HHHhhcCCCCc---
Confidence 566789999999999999999999999999999999999999998632 111010 11111111122
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+...+..+.+++.+||+.||++||+++|+++|
T Consensus 490 -k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 490 -KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 2334556788999999999999999999999986
No 23
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=349.47 Aligned_cols=257 Identities=28% Similarity=0.413 Sum_probs=205.6
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCC--ceEEEEe
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDE--HGFIVTE 907 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~e 907 (1119)
.++..++.||+|+||.||++.+.++|...|||.+... .+.+.+|++++++++|||||+++|...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 3456678999999999999999999999999998765 445799999999999999999999855444 6899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC-CCceEEEeccccccccC-
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS-ELEPKIGDFGMSKLISD- 985 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~vkl~DfGla~~~~~- 985 (1119)
|+++|+|.+++...+. .+++..++.+.+||++|++|||++ |||||||||+|||++. ++.+||+|||.++....
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999998874 499999999999999999999999 9999999999999999 79999999999987653
Q ss_pred CCCCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
...........||+.|||||++..+ ...+++||||+||++.||+||+.||...... ..+.-...... ..
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~----~~~~~~ig~~~------~~ 241 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE----AEALLLIGRED------SL 241 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch----HHHHHHHhccC------CC
Confidence 1222334457899999999999854 3446999999999999999999998642000 00000000000 00
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
+. .+...+.+..+++.+|++.+|++||||+++++|--.-.+
T Consensus 242 P~------ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 242 PE------IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred CC------CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 11 122245577899999999999999999999998655443
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-39 Score=349.41 Aligned_cols=260 Identities=25% Similarity=0.288 Sum_probs=201.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc--c----cHHHHHHHHhhcCCCCEEEEeeeeecC--CceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE--T----NFDVEIRTLSLVRHRNILRIVGSCTKD--EHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~----~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 906 (1119)
.|+..++||+|.||.||+|++..+|+.||+|+++-+. . -..+||.+++++.||||+++.+...+. +..|+|+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 3444478999999999999999999999999986433 2 256899999999999999999998876 6899999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
|||+. +|..++.... ..+++.+++.++.|++.|++|+|++ ||+|||||.+|||+|.+|.+||+|||+|+++...
T Consensus 198 eYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred ecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99965 7877777654 3589999999999999999999999 9999999999999999999999999999987653
Q ss_pred CCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC-----------ceeehhhhhhc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT-----------DIVTWTRWKLQ 1054 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-----------~~~~~~~~~~~ 1054 (1119)
. ....+..+.|.+|+|||.+.+ ..|+.++|+||.|||+.||++|+..|.+..+-+. ....|...+++
T Consensus 272 ~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 272 G-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred C-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence 3 333567789999999998876 5799999999999999999999988765422111 11113221211
Q ss_pred ccccccccccccccCCC---chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1055 ENHECICFLDREISFWD---SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ...+.+...... ......+....+++..+|..||++|.|+.++++.
T Consensus 351 ~----~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 351 H----ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred c----ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 1 011111111000 0011123467899999999999999999998864
No 25
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=354.53 Aligned_cols=255 Identities=33% Similarity=0.502 Sum_probs=205.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+...++.||+|.||+||+|++.+ .||||+++.+ .+.|++|+.++++-||.||+=+.|||..++. .||+.|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred Hhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 34567889999999999999874 6899998643 3569999999999999999999999998877 999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
|+|.+|+.++|..+. .++..+..+||.||++|+.|||.+ +|||||+|..||++.+++.|||+|||++.....-..
T Consensus 469 CeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred ccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence 999999999998764 588999999999999999999999 999999999999999999999999999976544322
Q ss_pred CCcccccccCCCcccccccCC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS---TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
........|...|||||++.. -+|++.+||||||+|+|||++|..||.. ...+-..|....- ++.+
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi---~~~dqIifmVGrG--------~l~p 612 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI---QNRDQIIFMVGRG--------YLMP 612 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC---CChhheEEEeccc--------ccCc
Confidence 222233457789999998864 3689999999999999999999999972 2222222211110 0011
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
+.. ......++++.+|+..||..++++||.+.+|+..|+.+...
T Consensus 613 d~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 613 DLS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred cch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 111 12234566889999999999999999999999988877663
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=336.84 Aligned_cols=259 Identities=26% Similarity=0.375 Sum_probs=208.6
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-----ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-----SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
..|+...+||.|..++||+|+..-+++.||||+++- ..+.+.+|+..|+.++||||++++..|..+...|+||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 456667899999999999999999999999999852 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
|.+|++.++++..-+. .+++..+..|.+++++||.|||.+ |.||||||+.|||++++|.||++|||.+..+.+...
T Consensus 106 Ma~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 9999999999886644 489999999999999999999999 999999999999999999999999999876654331
Q ss_pred -CCcc-cccccCCCcccccccCC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 989 -SSTR-SAIVGSLGYIAPENAYS--TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 989 -~~~~-~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
.... ...+||++|||||++.+ ..|+.|+||||||++..|+.+|..||....+-.. ....+........
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-----Ll~tLqn~pp~~~--- 253 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-----LLLTLQNDPPTLL--- 253 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-----HHHHhcCCCCCcc---
Confidence 1222 56689999999999654 3589999999999999999999999975421110 0011111111000
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...............+.+++..|++.||.+|||+++++++
T Consensus 254 -t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 -TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred -cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0011122334455688999999999999999999999875
No 27
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=322.33 Aligned_cols=234 Identities=26% Similarity=0.368 Sum_probs=199.6
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
+.++...+.+|.|+||.|.+++.+.+|..+|+|++++. .+...+|.++++.+.||.++++.+.+.+.+..|+|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 44556668899999999999999999999999999643 34567899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||++||-|..++++.++ +++..++-+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||.|+....
T Consensus 123 meyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EeccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 999999999999998764 89999999999999999999999 999999999999999999999999999997754
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
.....+|||.|+|||.+....|..++|.|||||++|||+.|..||..... ... ...++..
T Consensus 197 -----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~----~~i-----------Y~KI~~~ 256 (355)
T KOG0616|consen 197 -----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP----IQI-----------YEKILEG 256 (355)
T ss_pred -----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh----HHH-----------HHHHHhC
Confidence 35567899999999999999999999999999999999999999975321 111 1112222
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCC
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMR 1096 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 1096 (1119)
... .+.....++.+++...++.|-.+|
T Consensus 257 ~v~----fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 KVK----FPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ccc----CCcccCHHHHHHHHHHHhhhhHhh
Confidence 222 222234567899999999999988
No 28
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=380.80 Aligned_cols=259 Identities=29% Similarity=0.450 Sum_probs=215.3
Q ss_pred hCCceeeecCCccEEEEEeCCCce-----EEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRK-----HWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~-----~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+..+.||+|+||.||.|...+... .||||.+++. ..+|.+|+.+|+.+.|||||+++|+|.+.+..++++
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence 445889999999999999765433 4999988643 456899999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 907 EYMPGGTLFNVLHQNEP----RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
|||++|+|..++++.++ ...++..+...++.|||+|+.||+++ ++|||||+.+|+|+++...|||+|||+|+.
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLARD 851 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchhHh
Confidence 99999999999998733 23588999999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
+.+.+++.......-+.+|||||.+..+.++.++|||||||++||+++ |..||......+. ...+..
T Consensus 852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v----~~~~~~-------- 919 (1025)
T KOG1095|consen 852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV----LLDVLE-------- 919 (1025)
T ss_pred hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH----HHHHHh--------
Confidence 877666666555566789999999999999999999999999999997 8888864321111 100000
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCCCC
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNEGG 1116 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 1116 (1119)
..++ ..+..++..++++|..||+.+|++||++..|++.+.++.+...+.
T Consensus 920 --ggRL----~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 920 --GGRL----DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred --CCcc----CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 0111 223345667889999999999999999999999999998877654
No 29
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.8e-39 Score=354.99 Aligned_cols=243 Identities=30% Similarity=0.395 Sum_probs=207.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|..++.||.|+-|.|-.|++..+|+.+|||++.+. ...+++|+-+|+.+.||||+++++++++..++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 34568899999999999999999999999999654 45689999999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++|-|++++-+.++ +++.++.+++.||+.|+.|+|+. +|+|||+||+|+++|..+.+||+|||+|.....
T Consensus 94 v~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~--- 164 (786)
T KOG0588|consen 94 VPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP--- 164 (786)
T ss_pred cCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC---
Confidence 999999999988764 89999999999999999999999 999999999999999999999999999986543
Q ss_pred CCcccccccCCCcccccccCCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRL-TEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
.......+|.+.|.|||++.+..| +.++||||+|||+|.|++|+.||+. +.+....... .
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLlKV--------------~ 225 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLLKV--------------Q 225 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHHHH--------------H
Confidence 234455689999999999999888 5799999999999999999999973 1221111111 1
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
++.+..+...+.++.+++.+|+..||++|.|++||.+|-
T Consensus 226 ~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 226 RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 111122233455778999999999999999999999873
No 30
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.2e-39 Score=350.03 Aligned_cols=243 Identities=28% Similarity=0.434 Sum_probs=206.0
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-c-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-E-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|...+.||+|.||.||||+.+.+.+.||+|.+.+. + ..+.+|+++++.++|||||.++++|+...+.++|.||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 344456799999999999999999999999988432 2 2378899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+.| +|+.++...+ .++++.+..++.+++.|+.|||+. +|.|||+||+||+++..|.+|++|||+|+.+.. .
T Consensus 83 a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~ 153 (808)
T KOG0597|consen 83 AVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST--N 153 (808)
T ss_pred hhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc--C
Confidence 976 9999999876 499999999999999999999999 999999999999999999999999999997764 2
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
........|||-|||||...++.|+..+|+||+||++||+++|+.||... .+....+....+
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d------------- 215 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKD------------- 215 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcC-------------
Confidence 34455678999999999999999999999999999999999999999642 111122211111
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....+...+..+..+++..+.+||..|.+..+++.|
T Consensus 216 -~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 216 -PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 111223556678899999999999999999999875
No 31
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-38 Score=354.12 Aligned_cols=250 Identities=26% Similarity=0.373 Sum_probs=205.5
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---------cccHHHHHHHHhhcC-CCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---------ETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---------~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 903 (1119)
.+|..++.||+|.||.|+.|.+..+++.||+|++++. ...+.+|+.++++++ ||||+++++++......|
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ 96 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY 96 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence 3677789999999999999999999999999977543 234668999999999 999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC-CceEEEecccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE-LEPKIGDFGMSKL 982 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~vkl~DfGla~~ 982 (1119)
+||||+.||+|.+++...+ .+.+..+.+++.|++.|++|+|+. ||+||||||+||+++.+ +.+||+|||++..
T Consensus 97 ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 97 IVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999844 388899999999999999999999 99999999999999999 9999999999987
Q ss_pred ccCCCCCCcccccccCCCcccccccCCCC-CC-CcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccc
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYSTR-LT-EKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECI 1060 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1119)
.. .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.. ...............+
T Consensus 171 ~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~~~~l~~ki~~~~~~~- 242 (370)
T KOG0583|consen 171 SP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----NVPNLYRKIRKGEFKI- 242 (370)
T ss_pred cC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----cHHHHHHHHhcCCccC-
Confidence 73 1223455678999999999999877 75 7899999999999999999999752 1111111111111111
Q ss_pred ccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1061 CFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
+.+.. +.++..++.+|+..+|.+|+++.+|+ .-.-++
T Consensus 243 -------p~~~~-----S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 243 -------PSYLL-----SPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred -------CCCcC-----CHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 11110 45778999999999999999999999 444443
No 32
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=344.80 Aligned_cols=244 Identities=30% Similarity=0.495 Sum_probs=204.6
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHHH
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLFN 916 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 916 (1119)
++.+-+|+|+-|.||+|+.+ ++.||||+++.-+ +.+|+-+++++||||+.+.|+|.....+|||||||+.|-|..
T Consensus 127 sELeWlGSGaQGAVF~Grl~--netVAVKKV~elk---ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK---ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhhhhccCcccceeeeecc--CceehhHHHhhhh---hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 44467999999999999988 4899999986543 457889999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccccc
Q 001226 917 VLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIV 996 (1119)
Q Consensus 917 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~ 996 (1119)
+++... .++....+.|..+||.|+.|||.+ .|||||+|.-||||+.+..|||+|||-++...+. .+...++
T Consensus 202 VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFa 272 (904)
T KOG4721|consen 202 VLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFA 272 (904)
T ss_pred HHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhh
Confidence 999866 488889999999999999999999 9999999999999999999999999999877553 4556689
Q ss_pred cCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHH
Q 001226 997 GSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQL 1076 (1119)
Q Consensus 997 gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1119)
||..|||||++...+.++|+||||||||+|||+||+.||... +.....|.... ..... .-+..
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV---dssAIIwGVGs-----NsL~L---------pvPst 335 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV---DSSAIIWGVGS-----NSLHL---------PVPST 335 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc---chheeEEeccC-----Ccccc---------cCccc
Confidence 999999999999999999999999999999999999998642 22222222110 00000 11233
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1077 KALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1077 ~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
++..+.-+++.||+-.|..||++++|+.||+-+..
T Consensus 336 cP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP 370 (904)
T ss_pred CchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence 45567788999999999999999999999986543
No 33
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=344.66 Aligned_cols=256 Identities=29% Similarity=0.413 Sum_probs=213.5
Q ss_pred CCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 838 EGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
.+++||+|.||.|.+++... +..||||.++... .+|..|+++|.+++|||||+++|+|..++.+++|+|||++|
T Consensus 542 ~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnG 620 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENG 620 (807)
T ss_pred hhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence 45899999999999998776 7999999996432 46899999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
+|..++..+.... ...+...+|+.||+.|++||.+. ++||||+.++|+|++.++++||+|||+++-+...+++...
T Consensus 621 DLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq 696 (807)
T KOG1094|consen 621 DLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ 696 (807)
T ss_pred cHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence 9999999886432 45566788999999999999999 9999999999999999999999999999988777777777
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHH--hCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELL--FRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ell--tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
...+-+++|||||.+.-++++.++|||+||+++||++ +.+.||..... ++.++....... ++.....
T Consensus 697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~--e~vven~~~~~~---------~~~~~~~ 765 (807)
T KOG1094|consen 697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD--EQVVENAGEFFR---------DQGRQVV 765 (807)
T ss_pred cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH--HHHHHhhhhhcC---------CCCccee
Confidence 7888999999999999999999999999999999988 48889875422 222221111111 1111112
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
...+...+..+.+++.+||..|.++||+++++..+|.+.
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 233445577889999999999999999999999998764
No 34
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-37 Score=328.47 Aligned_cols=262 Identities=29% Similarity=0.456 Sum_probs=205.5
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEecc-cccccHHHHHHHHh--hcCCCCEEEEeeeeecCC----ceEEEEeccCC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLN-RSETNFDVEIRTLS--LVRHRNILRIVGSCTKDE----HGFIVTEYMPG 911 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~-~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~~~----~~~lV~e~~~~ 911 (1119)
.+.||+|.||.||+|.++ |+.||||++. .++..+.+|.++++ .++|+||..+++.-..+. ..++|++|.+.
T Consensus 216 ~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~ 293 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEH 293 (513)
T ss_pred EEEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccC
Confidence 378999999999999988 6899999995 45566777666665 569999999999876543 46999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYD-----CVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
|||+||+.+. .++.+...+++..+|.||+|||.. .+|.|.|||||+.||||.+++.+.|+|+|+|......
T Consensus 294 GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~ 369 (513)
T KOG2052|consen 294 GSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD 369 (513)
T ss_pred CcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc
Confidence 9999999975 489999999999999999999954 4689999999999999999999999999999877554
Q ss_pred CC--CCcccccccCCCcccccccCCCC------CCCcchHHHHHHHHHHHHhC----------CCCCCCCCCCCCceeeh
Q 001226 987 HS--SSTRSAIVGSLGYIAPENAYSTR------LTEKSDVYSYGVILFELLFR----------KMPVDPSFGEDTDIVTW 1048 (1119)
Q Consensus 987 ~~--~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~vl~elltg----------~~p~~~~~~~~~~~~~~ 1048 (1119)
.. .......+||.+|||||++...- ....+||||||.|+||+..+ +.||+...+.+..+.++
T Consensus 370 t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeM 449 (513)
T KOG2052|consen 370 TDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEM 449 (513)
T ss_pred CCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHH
Confidence 22 23456789999999999876432 23568999999999999854 47777665555444333
Q ss_pred hhhhhcccccccccccccccC-CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1049 TRWKLQENHECICFLDREISF-WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
.+. -+.+-+.+.++. |. .......+.++|+.||..+|..|.|+-.|.+.+.++.+..|
T Consensus 450 rkV------VCv~~~RP~ipnrW~--s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~e 508 (513)
T KOG2052|consen 450 RKV------VCVQKLRPNIPNRWK--SDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSDE 508 (513)
T ss_pred hcc------eeecccCCCCCcccc--cCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcChh
Confidence 221 122223333322 32 23455678999999999999999999999999999886443
No 35
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=320.29 Aligned_cols=262 Identities=23% Similarity=0.254 Sum_probs=203.7
Q ss_pred HHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccccc------cHHHHHHHHhhcCCCCEEEEeeeeecC--Cce
Q 001226 831 EDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSET------NFDVEIRTLSLVRHRNILRIVGSCTKD--EHG 902 (1119)
Q Consensus 831 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 902 (1119)
..+.+|+....|++|.||.||+|+++.+++.||+|+++-+++ ...+||.++..++|||||.+-.+.... +..
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 345667777899999999999999999999999999964432 257899999999999999999887643 568
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
|+|||||+. +|..++...+. .+...+++.++.|+.+|++|||.. .|+|||+||+|+|++..|.+||+|||+|+.
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhh
Confidence 999999965 89999988763 588899999999999999999999 899999999999999999999999999998
Q ss_pred ccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce-----------eehhh
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI-----------VTWTR 1050 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~-----------~~~~~ 1050 (1119)
++.. ....+..+.|.+|+|||.+.+ ..|+.++|+||+|||+.||++++.-|.+...-+.-. ..|..
T Consensus 227 ygsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 227 YGSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred hcCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 8653 344566789999999998876 469999999999999999999998876543222110 11111
Q ss_pred hhhcccc---cc----cccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1051 WKLQENH---EC----ICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1051 ~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....... .+ ...+.+.+.. ......-++++...+..||.+|.|++|.+++
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~-----~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGA-----LSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccc-----cccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1100000 00 0000111110 0023567899999999999999999999875
No 36
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.2e-37 Score=353.16 Aligned_cols=259 Identities=25% Similarity=0.415 Sum_probs=202.1
Q ss_pred HHhhCCceeeecCCccEEEEEeC-----CCceEEEEEecccc-----cccHHHHHHHHhhc-CCCCEEEEeeeeecC-Cc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSN-----NSRKHWAVKKLNRS-----ETNFDVEIRTLSLV-RHRNILRIVGSCTKD-EH 901 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~-----~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 901 (1119)
.+|+..++||+|+||.||+|.+. .+++.||+|+++.. ...+.+|+.+++.+ +||||+++++++... +.
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 36777899999999999999752 34568999998642 23477899999999 899999999988764 45
Q ss_pred eEEEEeccCCCCHHHhhccCCC----------------------------------------------------------
Q 001226 902 GFIVTEYMPGGTLFNVLHQNEP---------------------------------------------------------- 923 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 923 (1119)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 7899999999999999875321
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCCcc
Q 001226 924 -RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYI 1002 (1119)
Q Consensus 924 -~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~ 1002 (1119)
...+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++...............+++.|+
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 243 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM 243 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcccc
Confidence 12477888999999999999999999 99999999999999999999999999998664332222233345678899
Q ss_pred cccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHH
Q 001226 1003 APENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRL 1081 (1119)
Q Consensus 1003 aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1081 (1119)
|||++.+..++.++|||||||++|||++ |..||....... . .... ..... ... .+...+..+
T Consensus 244 aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~---~~~~-~~~~~--------~~~----~~~~~~~~l 306 (338)
T cd05102 244 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-E---FCQR-LKDGT--------RMR----APENATPEI 306 (338)
T ss_pred CcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-H---HHHH-HhcCC--------CCC----CCCCCCHHH
Confidence 9999998899999999999999999997 999986432110 0 0000 00000 000 011223467
Q ss_pred HHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1082 LELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1082 ~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 8999999999999999999999999998765
No 37
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=351.88 Aligned_cols=255 Identities=26% Similarity=0.366 Sum_probs=207.0
Q ss_pred hCCceeeecCCccEEEEEeCCCce---E-EEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRK---H-WAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~---~-vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
+.+++||+|+||.||+|..+..+. . ||||..+.+ ..++.+|+++|+.++|||||+++|++..+.++++|
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 344899999999999999765422 3 899988642 24578899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
||+|+||+|.++++..+. .++..+...++.+.|.||+|||++ +++||||.++|+|++.++.+||+|||+++....
T Consensus 240 mEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ 314 (474)
T ss_pred EEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence 999999999999998875 589999999999999999999999 999999999999999999999999999875431
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
+.........+.+|+|||.+..+.|++++|||||||++||+++ |..||.+.... +. ..+.....
T Consensus 315 --~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v---~~kI~~~~-------- 379 (474)
T KOG0194|consen 315 --YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EV---KAKIVKNG-------- 379 (474)
T ss_pred --eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HH---HHHHHhcC--------
Confidence 1122223357889999999999999999999999999999998 88898764221 11 11110110
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCCC
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNEG 1115 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 1115 (1119)
.+. ..+...+..+..++.+||..+|+.||+|.++.+.++.+....+.
T Consensus 380 --~r~--~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 380 --YRM--PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred --ccC--CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 000 11123456778899999999999999999999999998877654
No 38
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.9e-37 Score=339.11 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=200.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|...++||+|+||.||+|+-+++|..+|+|++++. ...+..|-.+|....+|.||+++..|.+.+.+|+|||
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiME 221 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIME 221 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEE
Confidence 455568999999999999999999999999999653 3457789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC-
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS- 986 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~- 986 (1119)
|+|||++..+|...+ .+++..++.++.+++-|+..+|.. |+|||||||+|+|||..|++|++|||++.-+...
T Consensus 222 ylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 222 YLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred ecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999999999876 599999999999999999999999 9999999999999999999999999998533110
Q ss_pred ---------------------CCCC----cc-------------------cccccCCCcccccccCCCCCCCcchHHHHH
Q 001226 987 ---------------------HSSS----TR-------------------SAIVGSLGYIAPENAYSTRLTEKSDVYSYG 1022 (1119)
Q Consensus 987 ---------------------~~~~----~~-------------------~~~~gt~~y~aPE~~~~~~~~~~sDvwslG 1022 (1119)
+... .. ...+|||.|+|||++.+..|+..+|.||+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0000 00 124899999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCC---H
Q 001226 1023 VILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPS---M 1099 (1119)
Q Consensus 1023 ~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~ 1099 (1119)
||+|||+.|.+||......+. ......|+.. +.+ ......+.+..++|.+|+. ||++|.- +
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T-~rkI~nwr~~------------l~f--P~~~~~s~eA~DLI~rll~-d~~~RLG~~G~ 439 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQET-YRKIVNWRET------------LKF--PEEVDLSDEAKDLITRLLC-DPENRLGSKGA 439 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHH-HHHHHHHhhh------------ccC--CCcCcccHHHHHHHHHHhc-CHHHhcCcccH
Confidence 999999999999975422211 1111122210 111 1112223677899999999 9999985 6
Q ss_pred HHHHHH
Q 001226 1100 REVVGF 1105 (1119)
Q Consensus 1100 ~ell~~ 1105 (1119)
+||.+|
T Consensus 440 ~EIK~H 445 (550)
T KOG0605|consen 440 EEIKKH 445 (550)
T ss_pred HHHhcC
Confidence 666654
No 39
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=336.19 Aligned_cols=244 Identities=27% Similarity=0.414 Sum_probs=205.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|+..+.||+|.||.||+|.+..+++.||+|++.-+ .++++.|+.++..++++||.++++.+..+...+++||||.
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~ 94 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG 94 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence 44457899999999999999999999999999533 3457789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
||++.+.++.... +++..+.-+++++..|+.|+|++ +.+|||||+.||++..+|.||++|||.+........
T Consensus 95 gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~-- 166 (467)
T KOG0201|consen 95 GGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK-- 166 (467)
T ss_pred CcchhhhhccCCC---CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhh--
Confidence 9999999987653 47778888999999999999999 999999999999999999999999999987765332
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.+...+||+.|||||++.+..|+.++||||+|++.+||.+|..|+....+ ...+....+.. .+.+..
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-mrvlflIpk~~-----------PP~L~~- 233 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-MRVLFLIPKSA-----------PPRLDG- 233 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-ceEEEeccCCC-----------CCcccc-
Confidence 33678999999999999998999999999999999999999999976543 11111111111 111111
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+..+.+++..|++.+|+.||+|+++++|
T Consensus 234 -----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 234 -----DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred -----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 234467899999999999999999999876
No 40
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=307.16 Aligned_cols=261 Identities=24% Similarity=0.335 Sum_probs=210.4
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecc----cccccHHHHHHHHhhcCCCCEEEEeeeeecCC-----ceEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLN----RSETNFDVEIRTLSLVRHRNILRIVGSCTKDE-----HGFI 904 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~l 904 (1119)
.||+..+.+|+|||+-||.++.-.+++.||+|++. ++.+...+|++..++++||||++++++...+. ..|+
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 47888899999999999999999999999999883 34456788999999999999999999875443 4899
Q ss_pred EEeccCCCCHHHhhccCCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRL-VLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~-~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+++|...|+|.+.+.....+. .+++.++.+|+.++++|+++||+. .++++||||||.||++++++.+++.|||.++..
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQA 179 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence 999999999999998765433 799999999999999999999988 235999999999999999999999999998765
Q ss_pred cCCCCCC-------cccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhh
Q 001226 984 SDSHSSS-------TRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKL 1053 (1119)
Q Consensus 984 ~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 1053 (1119)
.-.-... .......|..|+|||.+. +...++++||||+||++|+|+.|.-||+..++....+.
T Consensus 180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla------- 252 (302)
T KOG2345|consen 180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA------- 252 (302)
T ss_pred ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE-------
Confidence 3211111 112345889999999664 44578999999999999999999999987544322221
Q ss_pred cccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1054 QENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
.++..+.+..+...+ .+..+.+++.+|++.||.+||++.+++..++.+.
T Consensus 253 ------LAv~n~q~s~P~~~~--yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 253 ------LAVQNAQISIPNSSR--YSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ------EeeeccccccCCCCC--ccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 122233344333332 6778899999999999999999999999998764
No 41
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=331.06 Aligned_cols=267 Identities=27% Similarity=0.389 Sum_probs=201.4
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccc-ccccHHHHHHHHh--hcCCCCEEEEeeeeecCC----ceEEEEeccCC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-SETNFDVEIRTLS--LVRHRNILRIVGSCTKDE----HGFIVTEYMPG 911 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-~~~~~~~E~~~l~--~l~h~niv~l~~~~~~~~----~~~lV~e~~~~ 911 (1119)
.+++|+|+||.||||...+ +.||||++.. .++.|.+|-++++ .++|+||++++++-.... .+++|+||.+.
T Consensus 215 ~eli~~Grfg~V~KaqL~~--~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k 292 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDN--RLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK 292 (534)
T ss_pred HHHhhcCccceeehhhccC--ceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence 4679999999999998875 8999999964 4566777777665 568999999999876544 78999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC------CCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYD------CVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|+|.+|++.+- ++|....+++..|++||+|||+. ++|+|+|||||.+||||.+|+++.|+|||+|..+..
T Consensus 293 GsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p 368 (534)
T KOG3653|consen 293 GSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEP 368 (534)
T ss_pred CcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecC
Confidence 99999999874 99999999999999999999976 457899999999999999999999999999998876
Q ss_pred CCCCCcccccccCCCcccccccCCCC------CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTR------LTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHEC 1059 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1119)
.......-..+||.+|||||++.+.- .-.+.||||+|.|+|||+++..-+++. +..++..-..........+
T Consensus 369 ~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~--~vp~Yqlpfe~evG~hPt~ 446 (534)
T KOG3653|consen 369 GKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPG--PVPEYQLPFEAEVGNHPTL 446 (534)
T ss_pred CCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCC--CCCcccCchhHHhcCCCCH
Confidence 65555555689999999999887542 224689999999999999887655421 1111000000000000010
Q ss_pred c---c-cc----cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1060 I---C-FL----DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1060 ~---~-~~----~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
. + ++ .+.++...... ....-+.+.+..||..||+.|.|+.=+.+.+.++..-++
T Consensus 447 e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 447 EEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 0 0 11 11221111111 345568899999999999999999988888887766554
No 42
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-36 Score=321.64 Aligned_cols=265 Identities=22% Similarity=0.284 Sum_probs=205.5
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCC-EEEEeeeeecCC-----
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRN-ILRIVGSCTKDE----- 900 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 900 (1119)
+..|...++||+|+||+||+|+.+.+|+.||+|+++-.. ....+|+.+++.++|+| ||.+++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 344455567999999999999999999999999985332 23578999999999999 999999998776
Q ss_pred -ceEEEEeccCCCCHHHhhccCCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 901 -HGFIVTEYMPGGTLFNVLHQNEPR-LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 901 -~~~lV~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
..++|+||+ .-+|..++...... ..++...++.+++||++|++|+|++ +|+||||||+||+++++|.+|++|||
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 789999999 56999999887642 3577789999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce-----------e
Q 001226 979 MSKLISDSHSSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI-----------V 1046 (1119)
Q Consensus 979 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~-----------~ 1046 (1119)
+|+...- +.......++|.+|+|||++.+. .|+...||||+||+++||++++.-|.+....+.-. .
T Consensus 166 lAra~~i--p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 166 LARAFSI--PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred hHHHhcC--CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 9996643 23345677899999999998876 78999999999999999999998876543311111 1
Q ss_pred ehhhhhhcccccccccccccccCCCch---H---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcc
Q 001226 1047 TWTRWKLQENHECICFLDREISFWDSD---D---QLKALRLLELALECTRQVADMRPSMREVVGF--LIKL 1109 (1119)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~--L~~~ 1109 (1119)
.|......... +..+..+... . .....+..+++.+|++.+|.+|.|++.+++| +..+
T Consensus 244 ~Wp~v~~~~~~------k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 244 DWPGVSSLPDY------KAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCCCccccccc------cccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 11111110010 0111111100 0 1111367899999999999999999999998 5554
No 43
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=327.09 Aligned_cols=263 Identities=25% Similarity=0.328 Sum_probs=199.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecCC-----ceEEEEecc
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKDE-----HGFIVTEYM 909 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lV~e~~ 909 (1119)
.|+..+++|+|+||.||+|....+++.||||+.-.+..--.+|+.+|++++|||||+++-+|.... ...+|||||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 445568999999999999999999999999999777766678999999999999999999886432 335899999
Q ss_pred CCCCHHHhhccC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC-CceEEEeccccccccCCC
Q 001226 910 PGGTLFNVLHQN-EPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE-LEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 910 ~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~vkl~DfGla~~~~~~~ 987 (1119)
|. +|.++++.. .....++...++-++.||++|++|||+. +|+||||||+|+|+|.+ |.+||+|||.|+.....+
T Consensus 105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 64 898888753 1123578888899999999999999998 99999999999999987 899999999999886644
Q ss_pred CCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc--
Q 001226 988 SSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD-- 1064 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1064 (1119)
+ ......|..|+|||.+.+ ..|+.+.||||.|||+.||+.|+.-|.+..+.+. ++...+.--....+-...+.
T Consensus 181 p---niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ-L~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 181 P---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ-LVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred C---ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH-HHHHHHHhCCCCHHHHhhcCcc
Confidence 3 344578999999998876 4699999999999999999999988865332221 11111110000000001111
Q ss_pred ------ccccC--CCc-hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1065 ------REISF--WDS-DDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1065 ------~~~~~--~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
+.+.. |.. .....+.+..+++.++++.+|.+|.++.|+++|
T Consensus 257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111 101 123345678999999999999999999999865
No 44
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-37 Score=327.73 Aligned_cols=258 Identities=24% Similarity=0.346 Sum_probs=203.8
Q ss_pred HHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------------------ccHHHHHHHHhhcCCCCEEEE
Q 001226 831 EDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------------------TNFDVEIRTLSLVRHRNILRI 892 (1119)
Q Consensus 831 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------------------~~~~~E~~~l~~l~h~niv~l 892 (1119)
..+-+|+..+.||+|.||.|-+|++..+++.||||++.+.+ +.+.+||.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34567888899999999999999999999999999984321 357889999999999999999
Q ss_pred eeeeecC--CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC
Q 001226 893 VGSCTKD--EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL 970 (1119)
Q Consensus 893 ~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 970 (1119)
+++..+. +..|+|+|||..|.+... ......+++.+++++.++++.||+|||.+ |||||||||+|+|++++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 9999774 578999999988866422 12122389999999999999999999999 999999999999999999
Q ss_pred ceEEEeccccccccCCCC---CCcccccccCCCcccccccCCCC----CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 001226 971 EPKIGDFGMSKLISDSHS---SSTRSAIVGSLGYIAPENAYSTR----LTEKSDVYSYGVILFELLFRKMPVDPSFGEDT 1043 (1119)
Q Consensus 971 ~vkl~DfGla~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 1043 (1119)
+|||+|||.+.....+.. .......+|||.|+|||...++. .+.+.||||+||++|.|+.|+.||...+
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~---- 323 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF---- 323 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch----
Confidence 999999999886633211 11223468999999999877632 3578999999999999999999996431
Q ss_pred ceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1044 DIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
.+.. ..+++...+.+. ...+...++.+++.++|.+||++|.+..+|..|....++
T Consensus 324 ~~~l-----------~~KIvn~pL~fP--~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 324 ELEL-----------FDKIVNDPLEFP--ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHH-----------HHHHhcCcccCC--CcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 1111 122233333322 122345578899999999999999999999998776555
No 45
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-37 Score=302.80 Aligned_cols=252 Identities=28% Similarity=0.354 Sum_probs=211.4
Q ss_pred CCHHHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcCCCCEEEEeeeeecCC
Q 001226 828 LRYEDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVRHRNILRIVGSCTKDE 900 (1119)
Q Consensus 828 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 900 (1119)
.+...+.++..++.||+|.||.||.|+.+.++-.||+|++.+ .+.++.+|+++-..++||||++++++|.++.
T Consensus 16 ~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 16 TKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred ccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 334456677889999999999999999999999999999853 3457889999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccc
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMS 980 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla 980 (1119)
..|+++||.+.|.++..+...+. ..+++..+..++.|+|.|+.|+|.. +|+||||||+|+|++..+..|++|||.+
T Consensus 96 riyLilEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred eeEEEEEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCce
Confidence 99999999999999999986543 2488889999999999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccc
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECI 1060 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1119)
.... ...+...+||..|.|||...+..++..+|+|++|+..||++.|..||.....+ .......+.
T Consensus 172 V~~p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-etYkrI~k~--------- 237 (281)
T KOG0580|consen 172 VHAP----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-ETYKRIRKV--------- 237 (281)
T ss_pred eecC----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-HHHHHHHHc---------
Confidence 7543 34556678999999999999999999999999999999999999999754311 111111110
Q ss_pred ccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1061 CFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
+. ..+...+..+.+++.+|+..+|.+|.+..|++++-
T Consensus 238 ~~---------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 238 DL---------KFPSTISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred cc---------cCCcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 01 11123345678999999999999999999999874
No 46
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=336.91 Aligned_cols=257 Identities=24% Similarity=0.372 Sum_probs=216.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.+...+||.|.||.||.|.++...-.||||.++.+ .++|..|+.+|+.++|||+|+++|+|..+...|||+|||..
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 345568999999999999999998899999999765 36789999999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+|++++.. ..++.-..++++.||+.|++||..+ ++||||+..+|+||.++..|||+|||+++.+..+. +..
T Consensus 348 GNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-YTA 422 (1157)
T KOG4278|consen 348 GNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-YTA 422 (1157)
T ss_pred ccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCc-eec
Confidence 999999999874 4577778899999999999999999 99999999999999999999999999999887643 333
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.....-++.|.|||.+.-..++.++|||+|||++||+.| |-.||.+. +.. .+...+.+.++..
T Consensus 423 HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlS-----------qVY~LLEkgyRM~ 486 (1157)
T KOG4278|consen 423 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLS-----------QVYGLLEKGYRMD 486 (1157)
T ss_pred ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHH-----------HHHHHHhcccccc
Confidence 344455789999999998899999999999999999997 88887543 111 1112223333322
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
.+..++..++++|+.||++.|..||+++|+-+.++.+.....
T Consensus 487 --~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sS 528 (1157)
T KOG4278|consen 487 --GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSS 528 (1157)
T ss_pred --CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccc
Confidence 233456688999999999999999999999999999877654
No 47
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-39 Score=370.31 Aligned_cols=448 Identities=27% Similarity=0.310 Sum_probs=332.9
Q ss_pred hccCCcccEEEcCCCcccCCCCcccccCCCccEEEcccccccccCCccccccCccCEEEccCccccCCCCcccccccccc
Q 001226 92 ICKNQHLLSLDLSGNEFTGSIPKQLGNCGQLKTLLLNDNRFQGSIPPEIFKLKRLSWLDLGYNSLSGKIPPQVSLCYSLE 171 (1119)
Q Consensus 92 ~~~l~~l~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 171 (1119)
+....+++.|+++.|.+-...-+.+.+.-+|+.||+++|++. ..|..+..+.+|+.|+++.|.|. ..|.+..++++|+
T Consensus 17 i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~ 94 (1081)
T KOG0618|consen 17 ILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQ 94 (1081)
T ss_pred hccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcch
Confidence 345567899999999776433334455666999999999987 78999999999999999999998 6789999999999
Q ss_pred eeeecccccccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCCCCCcEEEccCCcc
Q 001226 172 SIGFHNNFLNGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNCRNLVEFSASSNNF 251 (1119)
Q Consensus 172 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i 251 (1119)
+|.|.+|.+. ..|..+..+++|++|++++|++. .+|..+..++.++.+..++|..
T Consensus 95 ~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~------------------------~~Pl~i~~lt~~~~~~~s~N~~ 149 (1081)
T KOG0618|consen 95 YLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG------------------------PIPLVIEVLTAEEELAASNNEK 149 (1081)
T ss_pred hheeccchhh-cCchhHHhhhcccccccchhccC------------------------CCchhHHhhhHHHHHhhhcchh
Confidence 9999999987 78999999999999999999987 4566777888888888888822
Q ss_pred CCccChhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccCCCCCcEEEccccccccccCcc
Q 001226 252 GGAISPWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISHCNQLQVIALSRNNLVGQIPRS 331 (1119)
Q Consensus 252 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 331 (1119)
.. .++.. .++.+++..|.+.+.++..+..+++ .|+|++|.+. ...+..+.+|+.|....|+++..
T Consensus 150 ~~-----~lg~~-~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l---- 214 (1081)
T KOG0618|consen 150 IQ-----RLGQT-SIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSEL---- 214 (1081)
T ss_pred hh-----hhccc-cchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceE----
Confidence 11 12222 2888999999999999988888877 8999999987 33577889999999999998732
Q ss_pred cCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcce
Q 001226 332 VGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLV 411 (1119)
Q Consensus 332 ~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 411 (1119)
--..++|+.|+.++|.++...+. .--.+|+++++++|+++ .+|++++.+.+|+.++..+|+++ .+|..+..+++|+
T Consensus 215 ~~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~ 290 (1081)
T KOG0618|consen 215 EISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLV 290 (1081)
T ss_pred EecCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHH
Confidence 23457899999999999833332 22358999999999998 56799999999999999999996 7888899999999
Q ss_pred EEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCc-cceeccccceeeCccCCccccccccceeeccC
Q 001226 412 ELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPY-LSRLDLTGNSFYGPIPANICVGTNLFVLVLGN 490 (1119)
Q Consensus 412 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~ 490 (1119)
.|.+..|.+. -+|+...+++.|++|+|..|+|. ..|..++..... |..|+.+.|++....-..-.....|+.|.+.+
T Consensus 291 ~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lylan 368 (1081)
T KOG0618|consen 291 SLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLAN 368 (1081)
T ss_pred HHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhc
Confidence 9999999999 78888999999999999999998 556566555554 77788888877633322222344566666666
Q ss_pred ccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCccccccccceEEeccCCcccCCCC
Q 001226 491 NRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIP 570 (1119)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (1119)
|++++..-..+.+...|+.|+|++|++.......+.+++.|+.|+||+|+|+ .+|.....+..|++|....|+|. ..|
T Consensus 369 N~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 369 NHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred CcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech
Confidence 6666655555666666666666666665433344455555555555555554 34444444555555555555554 344
Q ss_pred CccCCcccccEEEcccCccc
Q 001226 571 SELGNLENLQILRLSANKLD 590 (1119)
Q Consensus 571 ~~~~~l~~L~~L~Ls~N~l~ 590 (1119)
++..+++|+.+|+|.|+|+
T Consensus 447 -e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 447 -ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred -hhhhcCcceEEecccchhh
Confidence 4444555555555555554
No 48
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=331.18 Aligned_cols=254 Identities=27% Similarity=0.385 Sum_probs=211.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCC----ceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNS----RKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~----~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
..+.+++||+|.||.||+|.+... .-.||||..+.+ .+.|..|+.+|+.++|||||+++|+|.+ ...|+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wiv 468 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIV 468 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEE
Confidence 345568999999999999987543 345899988753 3458899999999999999999999986 477999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
||.++-|.|.+|+..++. .++......++.||+.|++|||+. .+|||||..+||++.+...||++|||+++.+.+
T Consensus 469 mEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 999999999999998865 488889999999999999999999 999999999999999999999999999999987
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHH-hCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELL-FRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
..++.. +...-++.|||||.+.-++++.++|||-|||.+||++ .|..||.+....+.-.......
T Consensus 544 ~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGe------------- 609 (974)
T KOG4257|consen 544 DAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGE------------- 609 (974)
T ss_pred cchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCC-------------
Confidence 655443 3566788999999999999999999999999999998 4999998754333221111111
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
++ ..+..++..+..++.+||+.+|.+||.+.++.+.|..+.+++
T Consensus 610 -Rl----P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee 653 (974)
T KOG4257|consen 610 -RL----PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE 653 (974)
T ss_pred -CC----CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence 11 123345667889999999999999999999999999888743
No 49
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=340.06 Aligned_cols=239 Identities=26% Similarity=0.397 Sum_probs=197.7
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 904 (1119)
+.+++..++||+|.||+|++|..+.+++.+|||+++++. +....|.+++... +||.++.++..|...++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 345566689999999999999999999999999997542 4466788888777 59999999999999999999
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||+.||++..+.+.. .+++..++-++..|+.||.|||++ +|||||||.+|||+|.+|.+||+|||+++.--
T Consensus 447 vmey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 99999999955444432 499999999999999999999999 99999999999999999999999999998543
Q ss_pred CCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
......+..+||+.|||||++.+..|+.++|.|||||++|||+.|..||.+..++ ++ +|
T Consensus 520 --~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe--e~-----------------Fd 578 (694)
T KOG0694|consen 520 --GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE--EV-----------------FD 578 (694)
T ss_pred --CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH--HH-----------------HH
Confidence 2334567789999999999999999999999999999999999999999753211 11 11
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCH
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSM 1099 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 1099 (1119)
.-+......+.-.+.+...|+++++..+|++|.-+
T Consensus 579 sI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 579 SIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11111122333455678899999999999999965
No 50
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=317.90 Aligned_cols=245 Identities=25% Similarity=0.373 Sum_probs=207.1
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
.+|+..+.||+|.||.|-+|.....|+.||||.+++++ -.+.+|+++|..+.||||+.++.+|+..+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 36666788999999999999998999999999886543 23678999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||..+|.|+||+.+++ .+++.+++.+++||++|+.|+|.+ ++||||+|.+||++|.++.+||+|||++-.+.+.
T Consensus 133 EYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 133 EYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 9999999999999877 499999999999999999999999 9999999999999999999999999999887653
Q ss_pred CCCCcccccccCCCcccccccCCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRL-TEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
.....++|++-|.+||.+.+.+| ++.+|-||+||++|-++.|..||++.. .....+..-. .
T Consensus 207 ---kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQIs~----------G 268 (668)
T KOG0611|consen 207 ---KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQISR----------G 268 (668)
T ss_pred ---cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHHHHHHhhc----------c
Confidence 33456789999999999999887 578999999999999999999998631 1111111110 0
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
. ..+...+.+..-+|++|+..+|++|.|+.+|..|..
T Consensus 269 a-----YrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 269 A-----YREPETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred c-----ccCCCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 0 111223345678999999999999999999998864
No 51
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.9e-35 Score=333.20 Aligned_cols=260 Identities=27% Similarity=0.414 Sum_probs=198.6
Q ss_pred HhhCCceeeecCCccEEEEEeCC----------------CceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNN----------------SRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIV 893 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~----------------~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~ 893 (1119)
+|+..++||+|+||.||+|.+.. ++..||+|+++.. ..++.+|+.++++++||||++++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 56677899999999999997543 3457999988643 23578899999999999999999
Q ss_pred eeeecCCceEEEEeccCCCCHHHhhccCCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEec
Q 001226 894 GSCTKDEHGFIVTEYMPGGTLFNVLHQNEP----------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHR 957 (1119)
Q Consensus 894 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 957 (1119)
+++.+.+..++||||+++|+|.+++..... ...+++..+.+++.|++.|++|||+. +|+||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH~ 162 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVHR 162 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccccc
Confidence 999999999999999999999999865321 12467888999999999999999999 99999
Q ss_pred CCCCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh--CCCCC
Q 001226 958 DIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF--RKMPV 1035 (1119)
Q Consensus 958 Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt--g~~p~ 1035 (1119)
||||+||+++.++.+||+|||+++...............++..|+|||++.++.++.++||||||+++|||++ +..||
T Consensus 163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~ 242 (304)
T cd05096 163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPY 242 (304)
T ss_pred CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999999999986644332223334456889999999888889999999999999999986 55666
Q ss_pred CCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1036 DPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
..... ................ . .....+...+..+.+++.+||+.+|++|||+++|.+.|+.
T Consensus 243 ~~~~~--~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 243 GELTD--EQVIENAGEFFRDQGR-------Q--VYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CcCCH--HHHHHHHHHHhhhccc-------c--ccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 53211 1111000000000000 0 0000111224578899999999999999999999998863
No 52
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=314.52 Aligned_cols=250 Identities=22% Similarity=0.315 Sum_probs=206.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
.+...+.||.|.-|+||+++.++++..+|+|++.+.. ...+.|.++++.+.||.++.+++.++.+...|+|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 3444578999999999999999999999999996432 346779999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
||+||+|....++... ..+++..++-++..++-||+|||.. |||+|||||+||||.++|++.++||.++.......
T Consensus 158 yCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred cCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999998887664 4699999999999999999999999 99999999999999999999999999976432100
Q ss_pred -------------------------------C-C----------------------CcccccccCCCcccccccCCCCCC
Q 001226 988 -------------------------------S-S----------------------STRSAIVGSLGYIAPENAYSTRLT 1013 (1119)
Q Consensus 988 -------------------------------~-~----------------------~~~~~~~gt~~y~aPE~~~~~~~~ 1013 (1119)
. . .....++||-+|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0 011235899999999999999999
Q ss_pred CcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCC
Q 001226 1014 EKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVA 1093 (1119)
Q Consensus 1014 ~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 1093 (1119)
.++|.|+|||++|||+.|+.||.+.... ..+..++.+.+.+.. ....+..+.++|++.|.+||
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~---------------~Tl~NIv~~~l~Fp~--~~~vs~~akDLIr~LLvKdP 376 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNK---------------ETLRNIVGQPLKFPE--EPEVSSAAKDLIRKLLVKDP 376 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCch---------------hhHHHHhcCCCcCCC--CCcchhHHHHHHHHHhccCh
Confidence 9999999999999999999999764222 122333333333321 12455678999999999999
Q ss_pred CCCCC----HHHHHHH
Q 001226 1094 DMRPS----MREVVGF 1105 (1119)
Q Consensus 1094 ~~RPs----~~ell~~ 1105 (1119)
.+|.. ++||.+|
T Consensus 377 ~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 377 SKRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhhccccchHHhhcC
Confidence 99998 8888765
No 53
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9.9e-36 Score=344.29 Aligned_cols=256 Identities=25% Similarity=0.426 Sum_probs=200.9
Q ss_pred HHhhCCceeeecCCccEEEEEe-----CCCceEEEEEeccccc-----ccHHHHHHHHhhc-CCCCEEEEeeeeecCCce
Q 001226 834 IRATEGRIIGKGKHGTVYRTLS-----NNSRKHWAVKKLNRSE-----TNFDVEIRTLSLV-RHRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 902 (1119)
.+|+.++.||+|+||.||+|.+ ..++..||||+++... ..+.+|+.+++.+ +||||+++++++.+++..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 3577789999999999999974 3456789999986432 3467899999999 899999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCCC-----------------------------------------------------------
Q 001226 903 FIVTEYMPGGTLFNVLHQNEP----------------------------------------------------------- 923 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 923 (1119)
++||||+++|+|.++++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 999999999999999865321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 924 -------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 924 -------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
...+++..+.+++.||++|++|||+. +|+||||||+||+++.++.+|++|||+++.........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 12478889999999999999999998 99999999999999999999999999998664432222
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||.+.+..++.++|||||||++|||++ |..||....... .. .... ......
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~---~~~~-----------~~~~~~ 336 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KF---YKMI-----------KEGYRM 336 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HH---HHHH-----------HhCccC
Confidence 2223345678999999999999999999999999999997 888886432111 10 0100 000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
. .+...+.++.+++.+||+.||++||+++||++.|++.
T Consensus 337 ~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 L--SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred C--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0 0011234688999999999999999999999999864
No 54
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-37 Score=321.49 Aligned_cols=259 Identities=22% Similarity=0.264 Sum_probs=197.4
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcCCCCEEEEeeeeec-----CCceEEEEe
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVRHRNILRIVGSCTK-----DEHGFIVTE 907 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~~lV~e 907 (1119)
.+.||+|+||.|+.|.++.+|+.||||++.. ......+|++.++.++|+||+.+.+++.. -...|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 4779999999999999999999999999852 23446789999999999999999998865 356799999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
+| +.+|...++..+ .++.+.+..+++|+.+|++|+|+. +|+|||+||.|++++.+..+||+|||+|+......
T Consensus 107 lM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 107 LM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred HH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccccC
Confidence 99 679999998765 389999999999999999999999 99999999999999999999999999999886432
Q ss_pred CCCcccccccCCCcccccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce-e-------ehhhhhhccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAY-STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI-V-------TWTRWKLQENHE 1058 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~-~-------~~~~~~~~~~~~ 1058 (1119)
.....+..+.|.+|+|||.+. ...|+.+.||||.||++.||++|+.-|.+...-+.-. . .......-....
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 233446678999999999765 5679999999999999999999998886542111100 0 000000000000
Q ss_pred ccccccccccCCC-----chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 CICFLDREISFWD-----SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...++. .++... ..-+.......+++++|+..||.+|+|++|.++|
T Consensus 260 ar~yi~-slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 260 ARPYIK-SLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHH-hCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000110 000000 0011234467899999999999999999999886
No 55
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.3e-36 Score=332.16 Aligned_cols=248 Identities=23% Similarity=0.270 Sum_probs=198.6
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|...+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++|++|+++.+++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 34458899999999999999999999999987532 12467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++.......
T Consensus 82 ~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 82 MNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred cCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 999999988865432 2488999999999999999999999 99999999999999999999999999998654321
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......||..|+|||++.+..++.++||||+||++|||++|+.||......... ....... .....
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~----------~~~~~- 222 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDRRV----------KEDQE- 222 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHHHh----------hcccc-
Confidence 223456899999999999999999999999999999999999999753211100 0000000 00000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPS-----MREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ell~~ 1105 (1119)
......+..+.+++.+||+.||++||+ +++++++
T Consensus 223 ---~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 223 ---EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ---cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 011123456789999999999999997 8898875
No 56
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.7e-36 Score=334.39 Aligned_cols=266 Identities=21% Similarity=0.251 Sum_probs=199.8
Q ss_pred HHHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 832 DVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 832 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
++.+|+..++||+|+||.||+|+++.+++.||+|+++.. ...+.+|+.+++.++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 345678889999999999999999999999999988532 235678999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++ +|.+++..... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 83 EYLDS-DLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred eCCCc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 99974 89998876543 478889999999999999999999 9999999999999999999999999998765322
Q ss_pred CCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeeh--------hhhhh-ccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTW--------TRWKL-QEN 1056 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~--------~~~~~-~~~ 1056 (1119)
. .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+...... ..|.. ...
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 157 T--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred C--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence 1 12234567899999998765 568999999999999999999999996532111000000 00000 000
Q ss_pred ccccccccccccCC--CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1057 HECICFLDREISFW--DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1057 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
........+..... .........++.+++.+|++.||.+|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000000 00001123467899999999999999999999865
No 57
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=365.30 Aligned_cols=461 Identities=26% Similarity=0.313 Sum_probs=247.0
Q ss_pred EEcCCCcccCCCCcccccCCCccEEEcccccccccCCccccccCccCEEEccCccccCCCCcccccccccceeeeccccc
Q 001226 101 LDLSGNEFTGSIPKQLGNCGQLKTLLLNDNRFQGSIPPEIFKLKRLSWLDLGYNSLSGKIPPQVSLCYSLESIGFHNNFL 180 (1119)
Q Consensus 101 L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l 180 (1119)
+|.+..+++ .||..+-.-..++.|+++.|-+-...-+.+.+.-+|+.|||++|+++ ..|..+..+++|+.|+++.|.+
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 566666666 66666655555777777777554322233344444777777777766 4555666666666666665555
Q ss_pred ccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCCCCCcEEEccCCccCCccChhhh
Q 001226 181 NGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNCRNLVEFSASSNNFGGAISPWIF 260 (1119)
Q Consensus 181 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i~~~~~~~~~ 260 (1119)
. ..|....++.+|++|.|..|++. .+|.+ +
T Consensus 81 ~-~vp~s~~~~~~l~~lnL~~n~l~------------------------~lP~~-------------------------~ 110 (1081)
T KOG0618|consen 81 R-SVPSSCSNMRNLQYLNLKNNRLQ------------------------SLPAS-------------------------I 110 (1081)
T ss_pred h-hCchhhhhhhcchhheeccchhh------------------------cCchh-------------------------H
Confidence 5 34455555555555555555544 23334 4
Q ss_pred hcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccCCCCCcEEEccccccccccCcccCCCCCCCe
Q 001226 261 KGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISHCNQLQVIALSRNNLVGQIPRSVGNLSSLNS 340 (1119)
Q Consensus 261 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 340 (1119)
..+++|++|+++.|++. .+|..+..++.++.+..++|..... ++... .+.++|..|.+.+.++..+.+++. .
T Consensus 111 ~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ 182 (1081)
T KOG0618|consen 111 SELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--Q 182 (1081)
T ss_pred HhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--e
Confidence 44455555555555555 5666666666666666666621111 11111 556666666666666655555555 5
Q ss_pred EEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEEeecccc
Q 001226 341 LLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALYNNRL 420 (1119)
Q Consensus 341 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 420 (1119)
|+|.+|.+. . ..+..+++|+.|....|++.... -..++|+.|+.++|.++...+ -..-.+|+++++++|++
T Consensus 183 ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l 253 (1081)
T KOG0618|consen 183 LDLRYNEME-V--LDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNL 253 (1081)
T ss_pred eecccchhh-h--hhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecc--ccccccceeeecchhhh
Confidence 666666665 1 23555666666666666665221 123556666666666663222 12234666777777776
Q ss_pred cccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceeeCccCCccccccccceeeccCccccCCCCcc
Q 001226 421 TGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIE 500 (1119)
Q Consensus 421 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~ 500 (1119)
+ .+|+++..+.+|+.++..+|+|+ .+|...+. ..+|+.|....|.+ . .+|..
T Consensus 254 ~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~-~~~L~~l~~~~nel------------------------~-yip~~ 305 (1081)
T KOG0618|consen 254 S-NLPEWIGACANLEALNANHNRLV-ALPLRISR-ITSLVSLSAAYNEL------------------------E-YIPPF 305 (1081)
T ss_pred h-cchHHHHhcccceEecccchhHH-hhHHHHhh-hhhHHHHHhhhhhh------------------------h-hCCCc
Confidence 6 45566667777777777777664 34444332 33444444444444 3 33444
Q ss_pred ccccccccEEEeccCccccCCCccccCCCC-cceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCcccc
Q 001226 501 IGKCSSLRRVILSNNLLQGSLPATLERNPG-VSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENL 579 (1119)
Q Consensus 501 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 579 (1119)
...+++|+.|+|..|+|....+..+..... |..|+.+.|.+.....-.-..++.|+.|+|.+|.++...-..+.+.++|
T Consensus 306 le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hL 385 (1081)
T KOG0618|consen 306 LEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHL 385 (1081)
T ss_pred ccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccce
Confidence 444445555555555544322222222222 4444444444442221111233445555555555555544555555556
Q ss_pred cEEEcccCcccCcCCc-ccccCCCCcEEeccCccccccCChhhhhcccCCeeEccCccCccCCCccccccccccEeecCC
Q 001226 580 QILRLSANKLDGRIPY-ELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSGAIPDAFSSVQSLFELQLGS 658 (1119)
Q Consensus 580 ~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 658 (1119)
+.|+|++|+|. .+|. .+.++..|++|+||+|+|+ .+|..+..+..|++|...+|+|. ..| .+..++.|+.+|++.
T Consensus 386 KVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~ 461 (1081)
T KOG0618|consen 386 KVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSC 461 (1081)
T ss_pred eeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEeccc
Confidence 66666666554 3443 3455555566666666655 45555555555666666555555 444 555555555555555
Q ss_pred cccC
Q 001226 659 NIFD 662 (1119)
Q Consensus 659 N~l~ 662 (1119)
|+++
T Consensus 462 N~L~ 465 (1081)
T KOG0618|consen 462 NNLS 465 (1081)
T ss_pred chhh
Confidence 5443
No 58
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.7e-36 Score=340.59 Aligned_cols=239 Identities=25% Similarity=0.345 Sum_probs=195.9
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+.||+|+||.||+|.++.+++.||+|+++.. ...+.+|+.+++.++||||+++++++..++..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999999999999999988642 134667999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
+|.+++...+ .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~ 152 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATM 152 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCcc
Confidence 9999998654 488999999999999999999999 9999999999999999999999999998753221 1223
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ........ ....
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~~~~~~~----------~~~~---- 213 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILM----------EEIR---- 213 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-----HHHHHHHc----------CCCC----
Confidence 3457999999999999999999999999999999999999999642110 00000000 0000
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
.+...+.++.+++.+||+.||++|| +++++++|
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 0112345678999999999999999 89999875
No 59
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.4e-36 Score=336.62 Aligned_cols=241 Identities=26% Similarity=0.358 Sum_probs=198.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 356678999999999999999999999999998532 2347789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 82 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 82 YVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 999999999998654 488899999999999999999999 9999999999999999999999999998865431
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
.....|++.|+|||.+.+..++.++||||+||++|||++|+.||...... . .... ......
T Consensus 155 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~---~~~~----------i~~~~~ 215 (291)
T cd05612 155 ----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--G---IYEK----------ILAGKL 215 (291)
T ss_pred ----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--H---HHHH----------HHhCCc
Confidence 22346899999999998888999999999999999999999998643110 0 0000 000111
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPS-----MREVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ell~~ 1105 (1119)
.. +......+.+++.+|++.||.+||+ ++|+++|
T Consensus 216 ~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 EF----PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred CC----CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 10 1112346789999999999999995 9998877
No 60
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=329.77 Aligned_cols=255 Identities=21% Similarity=0.297 Sum_probs=200.2
Q ss_pred CCCHHHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeec-
Q 001226 827 DLRYEDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTK- 898 (1119)
Q Consensus 827 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~- 898 (1119)
.+..+++.. .....||+|++|.||+|.+. ++.||||+++.. .+.+.+|+.++++++||||+++++++.+
T Consensus 14 ~i~~~~i~~-~~~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 14 CIESDDIDK-YTSVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI 90 (283)
T ss_pred ecCHHHcCC-CCCeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec
Confidence 344455522 22368999999999999884 789999998643 1346699999999999999999999876
Q ss_pred ---CCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEE
Q 001226 899 ---DEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIG 975 (1119)
Q Consensus 899 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~ 975 (1119)
....++||||+++|+|.++++..+ .+++..+.+++.+++.|+.|+|+.. +++||||||+||++++++.+|++
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~ 165 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKII 165 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEc
Confidence 346789999999999999998754 4889999999999999999999742 78899999999999999999999
Q ss_pred eccccccccCCCCCCcccccccCCCcccccccCC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhh
Q 001226 976 DFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYS--TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKL 1053 (1119)
Q Consensus 976 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 1053 (1119)
|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... .+. .....
T Consensus 166 dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~---~~~i~ 235 (283)
T PHA02988 166 CHGLEKILSSP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEI---YDLII 235 (283)
T ss_pred ccchHhhhccc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHH---HHHHH
Confidence 99998865432 123467899999998875 6889999999999999999999999974311 111 01000
Q ss_pred cccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1054 QENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
... .... .+...+..+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 236 ~~~--------~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 236 NKN--------NSLK----LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred hcC--------CCCC----CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 000 0000 111234568899999999999999999999999998754
No 61
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-35 Score=343.54 Aligned_cols=257 Identities=24% Similarity=0.416 Sum_probs=201.1
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-----CceEEEEEeccccc-----ccHHHHHHHHhhc-CCCCEEEEeeeeecCCce
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRSE-----TNFDVEIRTLSLV-RHRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-----~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 902 (1119)
.+|..++.||+|+||.||+|.+.. ++..||+|+++... ..+.+|+.+++.+ +||||+++++++..++..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 467778999999999999998643 33579999986432 3467899999999 899999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCCC-----------------------------------------------------------
Q 001226 903 FIVTEYMPGGTLFNVLHQNEP----------------------------------------------------------- 923 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 923 (1119)
++||||+++|+|.++++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 999999999999999864311
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCccccc
Q 001226 924 --------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAI 995 (1119)
Q Consensus 924 --------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~ 995 (1119)
...+++..+.+++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++..............
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 12477888999999999999999999 9999999999999999999999999999765433222222233
Q ss_pred ccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 996 VGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 996 ~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
.++..|+|||++.+..++.++||||+||++|||++ |+.||....... . .... .... ......
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~---~~~~-~~~~------~~~~~~------ 337 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-K---FYKM-VKRG------YQMSRP------ 337 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-H---HHHH-HHcc------cCccCC------
Confidence 45678999999988899999999999999999997 999986432111 0 0000 0000 000000
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1075 QLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
...+.++.+++.+||+.||++|||+.+|++.|+++.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 112357789999999999999999999999999864
No 62
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=341.78 Aligned_cols=252 Identities=25% Similarity=0.410 Sum_probs=211.1
Q ss_pred hCCceeeecCCccEEEEEeCCCc----eEEEEEeccc-----ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSR----KHWAVKKLNR-----SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~----~~vavK~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
...++||+|+||+||+|.+--.| .+||||++.. ...++..|+..|..++|||+++++++|..+. ..+|++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 34589999999999999875444 4689998843 3456889999999999999999999998765 789999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|||.|+|.+|++.++. .+-.+..+.|..|||+||.|||++ ++|||||..+||||.+...+||.|||+++......
T Consensus 778 ~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred hcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999998764 578889999999999999999999 99999999999999999999999999999887766
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
..........++.|||-|.+....|+.++|||||||++||++| |..||+....++. .+.+...
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI----------------~dlle~g 916 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI----------------PDLLEKG 916 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh----------------hHHHhcc
Confidence 6666566677889999999999999999999999999999996 9999976422211 1111111
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
-+ -..++..+.+++.++.+||..|++.||+++++...+.++-..
T Consensus 917 eR--LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 917 ER--LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred cc--CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 11 123445677899999999999999999999999999987654
No 63
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5e-36 Score=341.10 Aligned_cols=243 Identities=23% Similarity=0.337 Sum_probs=200.4
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
+.+|+..+.||+|+||.||+|+++.+++.||+|+++.. ...+.+|+.++++++||||+++++++.+++..|+|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 45677789999999999999999999999999988532 23577899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999998754 478889999999999999999999 999999999999999999999999999986643
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
. .....||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ...+ ... ...
T Consensus 171 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~~~~-~~i----------~~~ 230 (329)
T PTZ00263 171 R-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----FRIY-EKI----------LAG 230 (329)
T ss_pred C-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----HHHH-HHH----------hcC
Confidence 2 1234689999999999998899999999999999999999999864211 0000 000 001
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPS-----MREVVGF 1105 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ell~~ 1105 (1119)
.... +...+..+.+++.+||+.||++||+ ++++++|
T Consensus 231 ~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 231 RLKF----PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CcCC----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1110 0012345789999999999999997 7888876
No 64
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=346.15 Aligned_cols=256 Identities=25% Similarity=0.396 Sum_probs=206.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcC-CCCEEEEeeee-ec---C---Cce
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVR-HRNILRIVGSC-TK---D---EHG 902 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~-h~niv~l~~~~-~~---~---~~~ 902 (1119)
++++.++|.+|||+.||.|.+...|..||+|++-.. -..+.+||.+|+.++ |+|||.+++.. .. . -.+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345568899999999999999998899999988432 234788999999998 99999999932 21 1 246
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
++.||||+||.|-|++..+.... +++.++++|+.|+++|+++||.. +++|||||||-+|||++.++..||||||.|.-
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 89999999999999999766443 99999999999999999999976 67899999999999999999999999999875
Q ss_pred ccCCCCCC-------cccccccCCCccccccc---CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhh
Q 001226 983 ISDSHSSS-------TRSAIVGSLGYIAPENA---YSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWK 1052 (1119)
Q Consensus 983 ~~~~~~~~-------~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 1052 (1119)
........ ..-....|+.|+|||.+ .+..+++|+||||+||++|-|+....||+... .
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg----~-------- 263 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG----K-------- 263 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc----c--------
Confidence 43322111 01123689999999965 46678999999999999999999999997431 1
Q ss_pred hcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1053 LQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
..+++..+.+ .....+...+.+||..||+++|++||++.+|+..+.++..+.
T Consensus 264 -------laIlng~Y~~--P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 264 -------LAILNGNYSF--PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred -------eeEEeccccC--CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 1222322222 122467788999999999999999999999999999987764
No 65
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-36 Score=300.46 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=205.5
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------c------ccHHHHHHHHhhc-CCCCEEEEeeeeecCC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------E------TNFDVEIRTLSLV-RHRNILRIVGSCTKDE 900 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~------~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 900 (1119)
.+|...+.+|+|..++|-++.++.+++.+|+|++... + +....|+.+++++ .||+|+++.++++.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 3566778899999999999999999999999988421 1 2345689999987 5999999999999999
Q ss_pred ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccc
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMS 980 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla 980 (1119)
..++|+|.|+.|.|+||+...- .+++++..+|++|+.+|++|||.. .|||||+||+||+++++.++||+|||+|
T Consensus 97 F~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred hhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecccee
Confidence 9999999999999999998754 599999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccCCCcccccccC------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhc
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAY------STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQ 1054 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1054 (1119)
+.+..+ ......+|||+|+|||.+. ...|+..+|+||+||++|-++.|..||+.. .+..
T Consensus 171 ~~l~~G---ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR------------kQml 235 (411)
T KOG0599|consen 171 CQLEPG---EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR------------KQML 235 (411)
T ss_pred eccCCc---hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH------------HHHH
Confidence 987553 3445578999999999764 345788999999999999999999999631 1110
Q ss_pred ccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1055 ENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. +..++.....+...+....+....+++.+|++.||.+|.|++|.++|
T Consensus 236 M---LR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 236 M---LRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred H---HHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 0 11223333433333445566778999999999999999999999976
No 66
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-35 Score=335.46 Aligned_cols=261 Identities=24% Similarity=0.332 Sum_probs=201.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
+|+..+.||+|+||.||++.+..++..||+|+++.. ...+.+|+++++.++||||+++++++..++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (331)
T cd06649 6 DFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 85 (331)
T ss_pred cceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecC
Confidence 566678899999999999999999999999988543 245788999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++.... .+++..+..++.|++.|+.|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 157 (331)
T cd06649 86 DGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (331)
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc---
Confidence 9999999998654 3889999999999999999999863 6999999999999999999999999998765432
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhh-cccc-----------
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKL-QENH----------- 1057 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~----------- 1057 (1119)
......|++.|+|||++.+..++.++||||+||++|||++|+.||......+ ......... ....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCcccc
Confidence 2233468999999999998899999999999999999999999996432110 000000000 0000
Q ss_pred ----c-------------cccccccccc--CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1058 ----E-------------CICFLDREIS--FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1058 ----~-------------~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
. .....+.... ...........++.+++.+||+.||++|||++|++++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 0000000000 00000112345789999999999999999999999874
No 67
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-37 Score=302.16 Aligned_cols=246 Identities=24% Similarity=0.360 Sum_probs=198.0
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecc------cccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLN------RSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|...++||+|+|+.||++.++.+|+.+|+|.++ .+.+++++|+++-+.++|||||++.+.+.+++..|+|+|+|
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m 92 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 92 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence 344467999999999999999999999999774 24466889999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC---CCceEEEeccccccccCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS---ELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~vkl~DfGla~~~~~~ 986 (1119)
.|++|..-+-.+ ...++..+-..++||.+++.|.|.+ +|||||+||+|+++-+ ..-+|++|||+|....+
T Consensus 93 ~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~- 165 (355)
T KOG0033|consen 93 TGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND- 165 (355)
T ss_pred cchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeCC-
Confidence 999986444332 3477888889999999999999999 9999999999999954 34589999999998863
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
...-..++|||+|||||++...+|+.++|||+.||++|-++.|+.||++. +.. ....... ...+|-.
T Consensus 166 --g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~---~~~--rlye~I~------~g~yd~~ 232 (355)
T KOG0033|consen 166 --GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE---DQH--RLYEQIK------AGAYDYP 232 (355)
T ss_pred --ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc---cHH--HHHHHHh------ccccCCC
Confidence 33445678999999999999999999999999999999999999999752 111 1111111 1112222
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
-+.|. ..+....+++++|+..||.+|.|+.|.+.|
T Consensus 233 ~~~w~----~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 233 SPEWD----TVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CcccC----cCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 22232 234456899999999999999999998765
No 68
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.8e-35 Score=326.46 Aligned_cols=255 Identities=27% Similarity=0.458 Sum_probs=205.2
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCc-----eEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSR-----KHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~-----~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
.+++..+.||+|+||.||+|.....+ ..||+|.++... ..+.+|+..++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 45566788999999999999876544 679999886432 34788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC
Q 001226 904 IVTEYMPGGTLFNVLHQNEPR-------------LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL 970 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~-------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 970 (1119)
++|||+++++|.+++...... ..+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 999999999999999764321 3478889999999999999999999 999999999999999999
Q ss_pred ceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehh
Q 001226 971 EPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWT 1049 (1119)
Q Consensus 971 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 1049 (1119)
.++|+|||+++...............+++.|+|||.+.+..++.++||||+||++|||++ |..||...... +....
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~- 238 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEM- 238 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH-
Confidence 999999999986544333333344567889999999988899999999999999999998 99998653211 11000
Q ss_pred hhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1050 RWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
. ..+... ..+...+.++.+++.+||+.+|++||+++||+++|+++
T Consensus 239 ---i---------~~~~~~---~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 239 ---I---------RSRQLL---PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ---H---------HcCCcC---CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 0 000000 11223456789999999999999999999999999864
No 69
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.5e-35 Score=331.23 Aligned_cols=263 Identities=19% Similarity=0.223 Sum_probs=198.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|+..+.||+|+||.||+|+++.+++.||+|+++.. ...+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 456678999999999999999999999999988532 23467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++++.+..+.... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 154 (287)
T cd07848 82 VEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS- 154 (287)
T ss_pred CCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccccc-
Confidence 9987776554332 2488999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhh---------hhhc-cccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTR---------WKLQ-ENHE 1058 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~---------~~~~-~~~~ 1058 (1119)
........+++.|+|||++.+..++.++||||+||++|||++|+.||......+. ...... +... ....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhccch
Confidence 1222345689999999999888899999999999999999999999965321110 000000 0000 0000
Q ss_pred ccccccccccCCCc----hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 CICFLDREISFWDS----DDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+....... .....+..+.+++.+|++.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000000000 001234568999999999999999999999874
No 70
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.4e-35 Score=323.35 Aligned_cols=252 Identities=25% Similarity=0.354 Sum_probs=200.3
Q ss_pred HHhhCCceeeecCCccEEEEEeC---CCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSN---NSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
.+|+..+.||+|+||.||+|.++ ..+..||+|.++... ..+.+|+..++.++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45677789999999999999865 346789999986432 3577899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.....
T Consensus 85 ~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 85 TEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999986542 488999999999999999999999 999999999999999999999999998765432
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
.. ........++..|+|||.+.+..++.++||||+||++||+++ |+.||...... . ..... ....
T Consensus 160 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~---~~~~~-~~~~------- 225 (266)
T cd05064 160 EA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--D---VIKAV-EDGF------- 225 (266)
T ss_pred cc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--H---HHHHH-HCCC-------
Confidence 11 111122345678999999988999999999999999999775 99998643211 0 00000 0000
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
.. ..+...+..+.+++.+||+.+|++||++++|.+.|+++
T Consensus 226 -~~----~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 -RL----PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -CC----CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00 01122345678999999999999999999999999875
No 71
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.8e-35 Score=339.08 Aligned_cols=261 Identities=21% Similarity=0.265 Sum_probs=199.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|+... ..+.+|+.++++++||||+++++++..+...++|+|++. ++|
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L 169 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDL 169 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCH
Confidence 46677899999999999999999999999997643 457889999999999999999999999999999999995 788
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ......
T Consensus 170 ~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~ 242 (391)
T PHA03212 170 YCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-ANKYYG 242 (391)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccc-cccccc
Confidence 88887654 488999999999999999999999 99999999999999999999999999997543221 122234
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce------eehhhhh--------hccccccc
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI------VTWTRWK--------LQENHECI 1060 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~------~~~~~~~--------~~~~~~~~ 1060 (1119)
..||+.|+|||++.+..++.++||||+||++|||++|+.||....+.+... ....... ........
T Consensus 243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 579999999999988899999999999999999999998875432211110 0000000 00000000
Q ss_pred ccc----c---cc--ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 CFL----D---RE--ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 ~~~----~---~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+ . .. .+.........+.++.+++.+||+.||++|||++|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000 0 00 000001112345578899999999999999999999964
No 72
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=337.69 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=199.3
Q ss_pred HHHHhhCCceeeecCCccEEEEEeCCCc-eEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 832 DVIRATEGRIIGKGKHGTVYRTLSNNSR-KHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 832 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~-~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
++.+|+..+.||+|+||.||+|.++.++ ..||+|++... ...+.+|+.+++.++||||+++++++.+++..|
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 4567888899999999999999876654 68999988432 234678999999999999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||+++|+|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+|++|||++...
T Consensus 108 lv~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999999998765 488999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...+.. . .
T Consensus 182 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~-i----------~ 241 (340)
T PTZ00426 182 DTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP----LLIYQK-I----------L 241 (340)
T ss_pred CCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH----HHHHHH-H----------h
Confidence 331 2345689999999999888899999999999999999999999964311 000000 0 0
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
...... +...+..+.+++.+|++.+|++|+ +++++++|
T Consensus 242 ~~~~~~----p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 242 EGIIYF----PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred cCCCCC----CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 000000 111234568999999999999995 89999876
No 73
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.4e-35 Score=335.10 Aligned_cols=239 Identities=26% Similarity=0.358 Sum_probs=195.4
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+.||+|+||.||++.+..+++.||+|++++. ...+.+|+++++.++||||+++.+++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999999999999999998532 234677999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
+|.+++.... .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~ 152 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATM 152 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc--cccc
Confidence 9999987654 488999999999999999999999 9999999999999999999999999998753221 1122
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ......... +..+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~~~~~~--------~~~~----- 214 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILME--------DIKF----- 214 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHHHhccC--------CccC-----
Confidence 3456899999999999889999999999999999999999999643110 000000000 0001
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
+...+.++.+++.+|++.||++|| +++|++++
T Consensus 215 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 215 -PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 112234678999999999999997 89999876
No 74
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.3e-35 Score=334.72 Aligned_cols=239 Identities=25% Similarity=0.357 Sum_probs=194.7
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+.||+|+||.||++.+..+++.||+|+++.. ...+.+|+++++.++||||+++++++..++..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999999999999999998542 234567999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... ....
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~ 152 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATM 152 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCC--CCcc
Confidence 9999887654 488999999999999999999999 9999999999999999999999999998753221 1122
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... .. . ... ......
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~--~-~~~----------~~~~~~---- 213 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RL--F-ELI----------LMEEIR---- 213 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HH--H-HHH----------hcCCCC----
Confidence 3456899999999999889999999999999999999999998643111 00 0 000 000000
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
.+...+..+.+++.+||+.||++|| ++++++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 0112245678999999999999998 89998875
No 75
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.5e-35 Score=333.03 Aligned_cols=237 Identities=24% Similarity=0.333 Sum_probs=192.6
Q ss_pred eeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
||+|+||.||+|.+..+++.||+|+++.. ...+.+|+.+++.++||||+++++++.+++..|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999988532 23466799999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 152 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNT 152 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccc
Confidence 99997654 488999999999999999999999 99999999999999999999999999987543221 12234
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
..||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ........ ...... +
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~~~----------~~~~~~----~ 213 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRKIL----------QEPLRF----P 213 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHHHH----------cCCCCC----C
Confidence 5789999999999998999999999999999999999999964211 11111111 011111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRPS---MREVVGF 1105 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs---~~ell~~ 1105 (1119)
...+..+.+++.+||+.||++||+ ++|++.|
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 123346789999999999999975 6677654
No 76
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.2e-35 Score=336.93 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=201.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||+|++..+++.||+|+++.. ...+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 356678999999999999999999999999998532 2346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 82 YVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999997654 488899999999999999999999 999999999999999999999999999976533
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
......||+.|+|||.+.+..++.++||||+||++|||++|+.||......+. ......+.. .+...
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~--------~~~~~- 220 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-WENLKYWKE--------TLQRP- 220 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-HHHHHhccc--------cccCC-
Confidence 22345689999999999988999999999999999999999999964321110 000000000 00000
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.........+.++.+++.+|++.+|++||++++++++
T Consensus 221 -~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 221 -VYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -CCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000011234577899999999999999999999987
No 77
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.9e-36 Score=329.03 Aligned_cols=248 Identities=26% Similarity=0.359 Sum_probs=209.7
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCc-eEEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEH-GFIVT 906 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lV~ 906 (1119)
..|...+++|+|+||.++.++++..+..|++|.+.- .......|+.++.+++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 456667899999999999999999999999998842 22356789999999999999999999999988 89999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
+|++||++.+.+.+.+ ...++++.+.+|+.|++.|+.|||+. .|+|||||+.||+++.++.||++|||+|+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998876 34689999999999999999999988 9999999999999999999999999999988654
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
. ......+||+.|++||.+.+.+|..++||||+||++|||++-+.+|..... .. ...... ...+
T Consensus 160 ~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--~~---Li~ki~------~~~~--- 223 (426)
T KOG0589|consen 160 D--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--SE---LILKIN------RGLY--- 223 (426)
T ss_pred h--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--HH---HHHHHh------hccC---
Confidence 3 244567999999999999999999999999999999999999999975311 11 110000 0011
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...+..+..++..++..|++.+|+.||++.+++.+
T Consensus 224 ----~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 ----SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ----CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 12234456788999999999999999999999976
No 78
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-35 Score=329.26 Aligned_cols=247 Identities=24% Similarity=0.340 Sum_probs=209.7
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 905 (1119)
..|+.++.||+|.||.||+++.+.+|+.+|+|++.+.. ..+.+|+.+|+.+. |||||.+.++|++....++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 46777899999999999999999999999999985432 47889999999998 99999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC----CceEEEeccccc
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE----LEPKIGDFGMSK 981 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~----~~vkl~DfGla~ 981 (1119)
||++.||.|.+.+... .+++..+..++.|++.+++|+|+. ||+|||+||+|+++... +.+|++|||++.
T Consensus 115 mEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 9999999999999876 289999999999999999999998 99999999999999644 479999999999
Q ss_pred cccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 982 LISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 982 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
.... .......+||+.|+|||++....|+.++||||+||++|.|++|..||.......... .
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~---------------~ 249 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL---------------A 249 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH---------------H
Confidence 8755 345566799999999999999999999999999999999999999997542211111 1
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
+....+.+........+..+.+++..|+..||.+|+|+.++++|
T Consensus 250 i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 250 ILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 12222222222233446678899999999999999999999998
No 79
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.8e-35 Score=338.34 Aligned_cols=258 Identities=25% Similarity=0.413 Sum_probs=202.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCCC-----ceEEEEEecccc-----cccHHHHHHHHhhcC-CCCEEEEeeeeecCCce
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNS-----RKHWAVKKLNRS-----ETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~-----~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 902 (1119)
.+|+.+++||+|+||.||+|.+... +..||||+++.. .+.+.+|+.+++.+. ||||+++++++.+.+..
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI 116 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence 3667789999999999999986432 346999998532 235778999999996 99999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCCC-----------------------------------------------------------
Q 001226 903 FIVTEYMPGGTLFNVLHQNEP----------------------------------------------------------- 923 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 923 (1119)
|+||||+++|+|.++++....
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE 196 (400)
T ss_pred EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence 999999999999999865321
Q ss_pred ----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC
Q 001226 924 ----------------------------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE 969 (1119)
Q Consensus 924 ----------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 969 (1119)
...+++..+..++.|+++|++|||+. +|+||||||+||+++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~ 273 (400)
T cd05105 197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCC
Confidence 12377888899999999999999998 99999999999999999
Q ss_pred CceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeeh
Q 001226 970 LEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTW 1048 (1119)
Q Consensus 970 ~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 1048 (1119)
+.+|++|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||......... +
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~---~ 350 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF---Y 350 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH---H
Confidence 9999999999986644322222333457788999999988889999999999999999996 99998643211110 0
Q ss_pred hhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1049 TRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
. ..... ... ..+...+.++.+++.+||+.+|++||++.+|.++|+++.+
T Consensus 351 ~--~~~~~----------~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 N--KIKSG----------YRM--AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred H--HHhcC----------CCC--CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 0 00000 000 0111234578899999999999999999999999998754
No 80
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.3e-34 Score=316.96 Aligned_cols=246 Identities=28% Similarity=0.410 Sum_probs=196.7
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
+.||+|+||.||+|.+..+++.||+|.+... ...+.+|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999999988999999987532 24578899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++..... .+++..+..++.|+++|+.|||+. +++||||||+||+++.++.+|++|||++..............
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 81 LTFLRTEGP--RLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 999976442 478999999999999999999999 999999999999999999999999999876543221111122
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCch
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSD 1073 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1119)
...+..|+|||.+.++.++.++||||+||++|||++ |..||....... ..... ....... .
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~------~~~~~----------~~~~~~~--~ 217 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ------TREAI----------EQGVRLP--C 217 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH------HHHHH----------HcCCCCC--C
Confidence 234567999999988889999999999999999997 888886431110 00000 0000000 0
Q ss_pred HHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1074 DQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1074 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
+...+..+.+++.+|++.+|++|||++++.+.|++
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 11224578899999999999999999999999864
No 81
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8.5e-35 Score=331.55 Aligned_cols=258 Identities=26% Similarity=0.440 Sum_probs=201.5
Q ss_pred HhhCCceeeecCCccEEEEEeCC-----CceEEEEEeccccc-----ccHHHHHHHHhhc-CCCCEEEEeeeeec-CCce
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRSE-----TNFDVEIRTLSLV-RHRNILRIVGSCTK-DEHG 902 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-----~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~~~ 902 (1119)
+|...++||+|+||.||+|.... +++.||+|+++... ..+..|+.+++++ +|+||+++++++.. +...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 67778999999999999997543 35789999986422 2456799999999 79999999998865 4567
Q ss_pred EEEEeccCCCCHHHhhccCCC----------------------------------------------------------C
Q 001226 903 FIVTEYMPGGTLFNVLHQNEP----------------------------------------------------------R 924 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------~ 924 (1119)
++||||+++++|.+++..... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 899999999999999864321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCCcccc
Q 001226 925 LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAP 1004 (1119)
Q Consensus 925 ~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aP 1004 (1119)
..+++..+.+++.||+.|++|||+. +|+||||||+||+++.++.++|+|||+++...............++..|+||
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 244 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 244 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence 2578999999999999999999999 9999999999999999999999999999876443322233344567789999
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHH
Q 001226 1005 ENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLE 1083 (1119)
Q Consensus 1005 E~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1083 (1119)
|++.+..++.++||||+||++|||++ |+.||......+. +... .... ... ..+...+.++.+
T Consensus 245 E~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~----~~~~-~~~~----------~~~--~~~~~~~~~~~~ 307 (337)
T cd05054 245 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE----FCRR-LKEG----------TRM--RAPEYATPEIYS 307 (337)
T ss_pred HHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH----HHHH-Hhcc----------CCC--CCCccCCHHHHH
Confidence 99999999999999999999999997 9999864321110 0000 0000 000 001122356789
Q ss_pred HHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1084 LALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1084 l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
++.+||+.+|++||+++|++++|+++.+.
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999998764
No 82
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.4e-34 Score=318.92 Aligned_cols=252 Identities=24% Similarity=0.386 Sum_probs=203.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc---ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+++..+.||+|+||.||+|.++.+++.||+|+++... .++.+|++++++++||||+++++++..++..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 86 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCC
Confidence 4566788999999999999999889999999986543 3577899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++..... ..+++..+..++.|+++|++|||+. +++||||||+||++++++.+|++|||.+........ ..
T Consensus 87 ~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-~~ 161 (263)
T cd05052 87 GNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-TA 161 (263)
T ss_pred CcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee-ec
Confidence 999999976542 3588999999999999999999998 999999999999999999999999999986644221 11
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.....++..|+|||...+..++.++|||||||++|||++ |..||.....+ .. +.. .... ...
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~--~~~--~~~~------~~~----- 224 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QV--YEL--LEKG------YRM----- 224 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HH--HHH--HHCC------CCC-----
Confidence 122334678999999988899999999999999999998 89888642111 00 000 0000 000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
..+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 225 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 -ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 01112245688999999999999999999999999875
No 83
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-34 Score=328.22 Aligned_cols=196 Identities=28% Similarity=0.422 Sum_probs=172.8
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
.+|+..++||+|+||.||+|.+..++..||+|.+... ...+.+|+++++.++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 3577778999999999999999999999999987543 23578899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++...+ .+++..+..++.|++.|+.|||+.+ +++||||||+||+++.++.+|++|||++......
T Consensus 85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 85 MDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 99999999998654 3788899999999999999999752 7999999999999999999999999998765332
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPS 1038 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~ 1038 (1119)
......++..|+|||.+.+..++.++||||+||++|||++|+.||...
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 122346889999999998888999999999999999999999999753
No 84
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.8e-35 Score=334.79 Aligned_cols=264 Identities=24% Similarity=0.286 Sum_probs=194.8
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC-----CceE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD-----EHGF 903 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 903 (1119)
+|+..++||+|+||.||+|.+..+++.||||+++.. ...+.+|+++++.++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 366778999999999999999999999999987532 23477899999999999999999987543 2479
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||++ ++|.+++.... .+++..+..++.|+++|+.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 68999887654 388999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCC-CCcccccccCCCcccccccCC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCc-----------eeehh
Q 001226 984 SDSHS-SSTRSAIVGSLGYIAPENAYS--TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTD-----------IVTWT 1049 (1119)
Q Consensus 984 ~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~-----------~~~~~ 1049 (1119)
..... ........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......... ...+.
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 33221 112234578999999998765 67899999999999999999999998643210000 00000
Q ss_pred hhhhcccccccccccccccCCC-chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1050 RWKLQENHECICFLDREISFWD-SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.............+.+...... .........+.+++.+||+.+|++|||++|++++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000000000000000000 0001123467899999999999999999999976
No 85
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-34 Score=328.31 Aligned_cols=257 Identities=23% Similarity=0.396 Sum_probs=202.3
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCce----EEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRK----HWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~----~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 904 (1119)
.+|+..+.||+|+||.||+|.+..++. .||+|+++.. ..++.+|+.+++.++||||+++++++..+ ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 356777899999999999998765544 4899998532 23577899999999999999999998765 5679
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
|+||+++|+|.+++..... .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999987643 478899999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
............++..|+|||.+.+..++.++|||||||++|||++ |+.||...... . +.... ...
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~---~~~~~-~~~------- 227 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--E---ISSIL-EKG------- 227 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--H---HHHHH-hCC-------
Confidence 4322222222335678999999999999999999999999999997 99998643111 0 10000 000
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
.... .+...+.++.+++.+||+.+|++||++.++++.+.++..+..
T Consensus 228 -~~~~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 228 -ERLP----QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred -CCCC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 0000 011123467899999999999999999999999998877654
No 86
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1e-34 Score=345.98 Aligned_cols=249 Identities=23% Similarity=0.293 Sum_probs=200.4
Q ss_pred hhCCceeeecCCccEEEEEeCCC-ceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNS-RKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~-~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|...+.||+|+||.||+|....+ ++.||+|++... ...+.+|+.+++.++||||+++++++..++..|+||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 66678999999999999998777 788999976432 2346779999999999999999999999999999999999
Q ss_pred CCCHHHhhccC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 911 GGTLFNVLHQN-EPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 911 ~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
+|+|.++++.. .....+++..+..++.|++.|+.|+|+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 99999988653 2233588999999999999999999999 9999999999999999999999999999876543322
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... . ...... ......
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--~---~~~~~~----------~~~~~~- 289 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--R---EIMQQV----------LYGKYD- 289 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--H---HHHHHH----------HhCCCC-
Confidence 333456799999999999988999999999999999999999999864211 0 000000 000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+...+..+.+++.+||+.+|++||++++++++
T Consensus 290 --~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 290 --PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred --CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 0011234568899999999999999999998754
No 87
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.8e-34 Score=316.79 Aligned_cols=248 Identities=25% Similarity=0.440 Sum_probs=198.6
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+++..+.||+|+||.||+|..+. +..+|+|.++.. ..++.+|+.++++++||||+++++++.+++..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 456677899999999999998865 567999987543 3568889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+|+|.++++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++....... .
T Consensus 83 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~ 156 (256)
T cd05114 83 NGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-T 156 (256)
T ss_pred CCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce-e
Confidence 9999999976542 488999999999999999999999 999999999999999999999999999886543221 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||...+..++.++||||+|+++|||++ |+.||...... .. ....... .. .
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~---~~~i~~~-~~---~------- 220 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EV---VEMISRG-FR---L------- 220 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HH---HHHHHCC-CC---C-------
Confidence 1222345678999999988889999999999999999999 89998643111 00 0100000 00 0
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
..+...+..+.+++.+||+.+|++||+++++++.|
T Consensus 221 --~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 221 --YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 00111234678999999999999999999999886
No 88
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.3e-34 Score=326.23 Aligned_cols=263 Identities=22% Similarity=0.240 Sum_probs=196.4
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
.+|+..+.||+|+||.||+|.++.+++.||+|+++... ..+.+|+.+++.++||||+++++++.++...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 35667789999999999999999889999999985322 3467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++ +++.+++..... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 156 (303)
T cd07869 85 VH-TDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP-- 156 (303)
T ss_pred CC-cCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC--
Confidence 95 688888776532 478889999999999999999999 9999999999999999999999999998754321
Q ss_pred CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccc--------ccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQEN--------HEC 1059 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~ 1059 (1119)
........+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||............. ....... ...
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI-FLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH-HHHhCCCChhhccchhhc
Confidence 122234568899999998765 457889999999999999999999997532111100000 0000000 000
Q ss_pred cccccccccCCCchH-------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1060 ICFLDREISFWDSDD-------QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1060 ~~~~~~~~~~~~~~~-------~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
............... ......+.+++.+|++.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 000000000000000 0112457799999999999999999999874
No 89
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.6e-35 Score=336.78 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=199.3
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
..+|+..+.||+|+||.||+|.+..+++.||+|++++. ...+.+|+.+++.++||||+++++++.++...|+|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 45677889999999999999999999999999998532 23366899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++|+|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999998754 377888899999999999999999 999999999999999999999999999986543
Q ss_pred CCCCCcccccccCCCcccccccCCC----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYST----RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
.. ........||+.|+|||.+.+. .++.++||||+||++|||++|+.||...... ..+..
T Consensus 195 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~~~----------- 258 (370)
T cd05596 195 NG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSK----------- 258 (370)
T ss_pred CC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH----HHHHH-----------
Confidence 21 1122345799999999987643 4789999999999999999999999743110 00100
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADM--RPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ell~~ 1105 (1119)
.++.............+..+.+++.+|++.+|++ ||+++|+++|
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 259 IMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0010000000111123457789999999999998 9999999876
No 90
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2e-37 Score=339.01 Aligned_cols=364 Identities=27% Similarity=0.395 Sum_probs=221.1
Q ss_pred CCcEEEccccccc-cccCcccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeec
Q 001226 313 QLQVIALSRNNLV-GQIPRSVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYL 391 (1119)
Q Consensus 313 ~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L 391 (1119)
-.+-+|+++|.++ +..|.....+++++.|.|...++. .+|+.++.|.+|++|.++||++. .+-..+..++.|+.+.+
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 3444566666665 345666666666666666666665 56666666666666666666665 33445556666666666
Q ss_pred cCccccC-CCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceee
Q 001226 392 FNNRIEG-AIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFY 470 (1119)
Q Consensus 392 ~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1119)
.+|++.. -+|..+-.+..|+.||||+|+++ +.|..+..-+++-+|+||+|+|. .+|..++-+
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfin--------------- 148 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFIN--------------- 148 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHh---------------
Confidence 6666642 23444555666666666666666 56666666666666666666665 455544444
Q ss_pred CccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccC-CCCCccc
Q 001226 471 GPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQ-GSIPPVF 549 (1119)
Q Consensus 471 ~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~ 549 (1119)
++.|-.||||+|++. .+|..+..+..|+.|.|++|++.-.--..+..+++|+.|.+++.+-+ .-+|.++
T Consensus 149 ---------LtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsl 218 (1255)
T KOG0444|consen 149 ---------LTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSL 218 (1255)
T ss_pred ---------hHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCch
Confidence 444555555555554 55556666666666666666654332233444555555555554422 2466667
Q ss_pred cccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCCe
Q 001226 550 GFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQS 629 (1119)
Q Consensus 550 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 629 (1119)
..+.+|..+|||.|.+. .+|+.+.++++|+.|+||+|+|+ .+....+...+|++|+||+|+++ .+|+.+..|++|+.
T Consensus 219 d~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k 295 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK 295 (1255)
T ss_pred hhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH
Confidence 77777777777777776 67777777777777777777776 55555666667777777777776 57777777777777
Q ss_pred eEccCccCc-cCCCccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCcccccccccccceeeccCc
Q 001226 630 LSLQENNLS-GAIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQILDLSSN 708 (1119)
Q Consensus 630 L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 708 (1119)
|++.+|+|+ .-||+.++++.+|+.+..++|.+. -+|+.++.+..|+.|.|++|
T Consensus 296 Ly~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE--------------------------lVPEglcRC~kL~kL~L~~N 349 (1255)
T KOG0444|consen 296 LYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE--------------------------LVPEGLCRCVKLQKLKLDHN 349 (1255)
T ss_pred HHhccCcccccCCccchhhhhhhHHHHhhccccc--------------------------cCchhhhhhHHHHHhccccc
Confidence 777777766 235666777766666555555554 44555555555555555555
Q ss_pred eecccCCccccccccceEEeccccccc
Q 001226 709 SFSGEIPTEVNNMVSLYFVNISFNHFS 735 (1119)
Q Consensus 709 ~l~g~ip~~~~~~~~l~~l~ls~N~~~ 735 (1119)
++- ++|+.|.-++.|..||+..|+--
T Consensus 350 rLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 350 RLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred cee-echhhhhhcCCcceeeccCCcCc
Confidence 554 44555555555555555555433
No 91
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.4e-34 Score=321.78 Aligned_cols=244 Identities=23% Similarity=0.293 Sum_probs=195.1
Q ss_pred eeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
||+|+||+||++.++.+++.||+|++.... ..+..|+++++.++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999999999999999985321 3456799999999999999999999999999999999999999
Q ss_pred HHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCccc
Q 001226 915 FNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRS 993 (1119)
Q Consensus 915 ~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~ 993 (1119)
.+++.... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||.+........ ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 98875432 223589999999999999999999999 999999999999999999999999999976543221 223
Q ss_pred ccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCch
Q 001226 994 AIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSD 1073 (1119)
Q Consensus 994 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1119)
...||+.|+|||.+.+..++.++||||+||++|||++|+.||......... ..... ....... ..
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~-~~~~~----------~~~~~~~----~~ 220 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQ----------RILNDSV----TY 220 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH-HHHHH----------hhcccCC----CC
Confidence 356899999999999999999999999999999999999999643211110 00000 0001111 11
Q ss_pred HHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1074 DQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1074 ~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
+...+..+.+++.+|++.||++|| +++++++|
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 221 PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 122345678999999999999999 77888875
No 92
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.4e-34 Score=332.80 Aligned_cols=245 Identities=24% Similarity=0.397 Sum_probs=191.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
.+|+..++||+|+||.||+|.+..+++.||||++... ...+.+|+++++.++|+||+++++++.+++..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 4455668899999999999999988999999998533 23577899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+.. ..++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 9999986432 245677889999999999999999 99999999999999999999999999998664321
Q ss_pred CCcccccccCCCcccccccCC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS-----TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
.......||..|+|||.+.. ...+.++|||||||++|||++|+.||..... .+ |........ .
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~---~~~~~~~~~------~ 290 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GD---WASLMCAIC------M 290 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--cc---HHHHHHHHh------c
Confidence 12234578999999997643 2345689999999999999999999973211 11 111000000 0
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
... .........++.+++.+||+.||++||+++|++++
T Consensus 291 ~~~----~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 291 SQP----PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred cCC----CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00111234568899999999999999999999987
No 93
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.3e-34 Score=319.83 Aligned_cols=254 Identities=24% Similarity=0.412 Sum_probs=199.7
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-----CceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
.+|+..+.||+|+||.||+|.++. ++..||+|+++... .++.+|+.+++.++||||+++++++.++...+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~ 85 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 85 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE
Confidence 467778999999999999998653 35679999885422 34778999999999999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEe
Q 001226 904 IVTEYMPGGTLFNVLHQNEP-------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGD 976 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~D 976 (1119)
+||||+++++|.+++..... ....++..+..++.|++.|++|||+. +++||||||+||++++++.++++|
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEECC
Confidence 99999999999999875332 12467888999999999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcc
Q 001226 977 FGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQE 1055 (1119)
Q Consensus 977 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1055 (1119)
||+++...............+++.|+|||.+.++.++.++|||||||++|||++ |..||...... ........
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~- 236 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----QVLRFVME- 236 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHc-
Confidence 999876544332222223455788999999988889999999999999999998 68887543111 11111000
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1056 NHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
.... ..+...+..+.+++.+|++.+|++|||+.|+++++++
T Consensus 237 ---------~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 237 ---------GGLL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ---------CCcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 0000 0011123467899999999999999999999999864
No 94
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.6e-35 Score=328.98 Aligned_cols=238 Identities=27% Similarity=0.396 Sum_probs=189.1
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhh-cCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSL-VRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||.||+|.+..+++.||+|+++... .....|..++.. .+||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999886421 233456666654 4799999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~ 152 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GK 152 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cc
Confidence 99999987654 388999999999999999999998 99999999999999999999999999997543222 22
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||..... .. ........ .+.+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--~~---~~~~i~~~--------~~~~---- 215 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--DE---LFDSILND--------RPHF---- 215 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--HH---HHHHHHcC--------CCCC----
Confidence 3345789999999999988899999999999999999999999964311 00 00000000 0001
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMR-EVVG 1104 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ell~ 1104 (1119)
+...+.++.+++.+||+.+|++||++. ++++
T Consensus 216 --~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 216 --PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred --CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111234668999999999999999875 5544
No 95
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=4.2e-37 Score=336.45 Aligned_cols=367 Identities=30% Similarity=0.378 Sum_probs=225.6
Q ss_pred CCCCcEEEccCCccCCccChhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccCCCCCcEE
Q 001226 238 CRNLVEFSASSNNFGGAISPWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISHCNQLQVI 317 (1119)
Q Consensus 238 l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 317 (1119)
++-.+-.++++|.++|.-.|.....+++++.|.|...++. .+|+.++.+.+|++|.+++|++.. +-+.++.++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHH
Confidence 3445667888888888777888888888888888888888 788888888888888888888873 34456666666666
Q ss_pred Ecccccccc-ccCcccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccc
Q 001226 318 ALSRNNLVG-QIPRSVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRI 396 (1119)
Q Consensus 318 ~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l 396 (1119)
++.+|++.. -+|..+..+..|+.||||+|+++ ..|..+..-+++-.|+||+|+|.
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie----------------------- 139 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE----------------------- 139 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-----------------------
Confidence 666666652 24445555555555555555555 44545555555555555555554
Q ss_pred cCCCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceee-CccCC
Q 001226 397 EGAIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFY-GPIPA 475 (1119)
Q Consensus 397 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~ 475 (1119)
.++...|.+++.|-.||||+|++. ..|+.+.++..|++|.|++|.+... ...-...+.+|+.|.+++.+=+ .-+|.
T Consensus 140 -tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hf-QLrQLPsmtsL~vLhms~TqRTl~N~Pt 216 (1255)
T KOG0444|consen 140 -TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHF-QLRQLPSMTSLSVLHMSNTQRTLDNIPT 216 (1255)
T ss_pred -cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHH-HHhcCccchhhhhhhcccccchhhcCCC
Confidence 333333444444444444444444 3444455555555555555544310 0000011223333333332211 13455
Q ss_pred ccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCccccccccc
Q 001226 476 NICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNL 555 (1119)
Q Consensus 476 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 555 (1119)
++..+.||..+|+|.|.+. .+|..+-++.+|++|+||+|+|+ ++....+.|.+|
T Consensus 217 sld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-------------------------eL~~~~~~W~~l 270 (1255)
T KOG0444|consen 217 SLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-------------------------ELNMTEGEWENL 270 (1255)
T ss_pred chhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-------------------------eeeccHHHHhhh
Confidence 5555555555555555555 45555555555555555555554 344455666777
Q ss_pred eEEeccCCcccCCCCCccCCcccccEEEcccCccc-CcCCcccccCCCCcEEeccCccccccCChhhhhcccCCeeEccC
Q 001226 556 TMLDFSENRLSGSIPSELGNLENLQILRLSANKLD-GRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQE 634 (1119)
Q Consensus 556 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 634 (1119)
++|+||+|+++ .+|+.++.|+.|+.|.+.+|+++ .-+|..++++.+|+.+..++|.+. .+|+.++.+..|+.|.|++
T Consensus 271 EtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~ 348 (1255)
T KOG0444|consen 271 ETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDH 348 (1255)
T ss_pred hhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccc
Confidence 77777777776 67777777777777777777764 236777777777777777777776 6777777777777777777
Q ss_pred ccCccCCCccccccccccEeecCCcccC
Q 001226 635 NNLSGAIPDAFSSVQSLFELQLGSNIFD 662 (1119)
Q Consensus 635 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 662 (1119)
|+|. ++|+++.-++-|+.|||..|.-.
T Consensus 349 NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 349 NRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred ccee-echhhhhhcCCcceeeccCCcCc
Confidence 7776 67777777777777777777654
No 96
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.3e-34 Score=320.89 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=200.6
Q ss_pred HHhhCCceeeecCCccEEEEEeC----CCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSN----NSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 904 (1119)
.+++..+.||+|+||.||+|... ..+..||+|.++... ..+.+|+.++++++||||+++++++..+...|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 44566788999999999999853 346789999986422 357789999999999999999999999999999
Q ss_pred EEeccCCCCHHHhhccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC
Q 001226 905 VTEYMPGGTLFNVLHQNEP--------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL 970 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 970 (1119)
||||+++++|.+++..... ...+++.++..++.|++.|++|||+. +++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999864321 23478889999999999999999999 999999999999999999
Q ss_pred ceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehh
Q 001226 971 EPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWT 1049 (1119)
Q Consensus 971 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 1049 (1119)
.+|++|||+++...............++..|+|||+..+..++.++||||+||++|||++ |..||..... .......
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~ 239 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMV 239 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 999999999986644332223334456778999999988889999999999999999998 8888864211 0100000
Q ss_pred hhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1050 RWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
. ... ... .+...+..+.+++.+|++.+|++||++.+|.++|++.
T Consensus 240 ~----~~~--------~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05090 240 R----KRQ--------LLP----CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW 283 (283)
T ss_pred H----cCC--------cCC----CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence 0 000 000 0111234678999999999999999999999998763
No 97
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.9e-34 Score=328.08 Aligned_cols=245 Identities=23% Similarity=0.350 Sum_probs=194.5
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
++||+|+||.||+|.+..+++.||+|++++. ...+.+|..+++.+ +||||+++++++.++...|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999999999999999998642 12366788888888 699999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++...+ .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++.... ....
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~--~~~~ 152 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR--PGDT 152 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccccc--CCCc
Confidence 99999887654 489999999999999999999999 999999999999999999999999999874321 1122
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC---ceeehhhhhhccccccccccccccc
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT---DIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||+.....+. ....+... ........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 223 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ---------VILEKQIR 223 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH---------HHHcCCCC
Confidence 3345789999999999999999999999999999999999999974321111 00011000 00111111
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPS------MREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~ell~~ 1105 (1119)
. +...+..+.+++.+|++.||.+||+ ++++++|
T Consensus 224 ~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 224 I----PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred C----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 0 1112346789999999999999997 6788765
No 98
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1e-34 Score=337.29 Aligned_cols=249 Identities=23% Similarity=0.376 Sum_probs=194.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..+.||+|+||+||+|.+..+++.||+|+++.. ...+.+|+.+++.++||||+++++++.+++..|+||||
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~ 82 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEec
Confidence 45568899999999999999999999999998532 23467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.......
T Consensus 83 ~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 83 IPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999998754 488889999999999999999998 999999999999999999999999999754311000
Q ss_pred ---------------------------------------------CCcccccccCCCcccccccCCCCCCCcchHHHHHH
Q 001226 989 ---------------------------------------------SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGV 1023 (1119)
Q Consensus 989 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~ 1023 (1119)
........||+.|+|||.+.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 00012347999999999998888999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHH--ccccCCCCCCCHHH
Q 001226 1024 ILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALE--CTRQVADMRPSMRE 1101 (1119)
Q Consensus 1024 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP~~RPs~~e 1101 (1119)
++|||++|+.||.......... ....+ ...... ......+.++.+++.+ |+..+|..||+++|
T Consensus 237 il~elltG~~Pf~~~~~~~~~~-~i~~~------------~~~~~~--~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQL-KVINW------------ENTLHI--PPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHHH-HHHcc------------ccccCC--CCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 9999999999997532111100 00000 000000 0001123456788877 55666667999999
Q ss_pred HHHH
Q 001226 1102 VVGF 1105 (1119)
Q Consensus 1102 ll~~ 1105 (1119)
+++|
T Consensus 302 ~l~h 305 (381)
T cd05626 302 IKAH 305 (381)
T ss_pred HhcC
Confidence 9986
No 99
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.6e-35 Score=329.60 Aligned_cols=239 Identities=27% Similarity=0.366 Sum_probs=192.0
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||.||+|+++.+++.||+|++++. ...+..|..+++.. +||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999998532 12355677788766 699999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--~~~ 152 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--GKT 152 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--CCc
Confidence 99999987654 488999999999999999999999 9999999999999999999999999998753221 122
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ....... .....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~----------~~~~~--- 214 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAIL----------NDEVV--- 214 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHh----------cCCCC---
Confidence 33457899999999999889999999999999999999999999643110 0011110 00000
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCH------HHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSM------REVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~ell~~ 1105 (1119)
.+...+.++.+++.+|++.||++||++ +++++|
T Consensus 215 -~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 215 -YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred -CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 011123467899999999999999998 666654
No 100
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=302.86 Aligned_cols=246 Identities=22% Similarity=0.319 Sum_probs=207.9
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccc--ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR--SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
.+..++|+|.||.||+|.++.+|+.||||++.. +-+++..|+.+|++++.|+||+++|.+......++|||||..|+.
T Consensus 36 Di~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSi 115 (502)
T KOG0574|consen 36 DIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSI 115 (502)
T ss_pred HHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcH
Confidence 344789999999999999999999999999854 446788999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+.++.+.. ++++.++..+.+.-++|++|||.. .-+|||||+.||+++.+|.+|++|||.|..+.+.. ..+..
T Consensus 116 SDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--AKRNT 188 (502)
T KOG0574|consen 116 SDIMRARRK--PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--AKRNT 188 (502)
T ss_pred HHHHHHhcC--CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH--HhhCc
Confidence 999987653 699999999999999999999998 88999999999999999999999999998776522 23456
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
..||+.|||||++..-.|..++||||+|++..||..|+.||....+- +.+.- +.-..+.-+..+
T Consensus 189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-RAIFM---------------IPT~PPPTF~KP 252 (502)
T KOG0574|consen 189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-RAIFM---------------IPTKPPPTFKKP 252 (502)
T ss_pred cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-ceeEe---------------ccCCCCCCCCCh
Confidence 78999999999999989999999999999999999999998753221 11111 000111111234
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..-+.++.++++.|+-..|++|.|+.++.+|
T Consensus 253 E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 253 EEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 4456788999999999999999999999887
No 101
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2e-34 Score=327.83 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=193.4
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||.||+|.+..+++.||+|++++.. ..+.+|+.++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999986421 2356788888766 799999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--~~~ 152 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDT 152 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCC--CCc
Confidence 99999887654 489999999999999999999999 9999999999999999999999999998753221 112
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...............+.. ..........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~------~~i~~~~~~~-- 224 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF------QVILEKQIRI-- 224 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHH------HHHhcCCCCC--
Confidence 23457899999999999999999999999999999999999999643211111100000000 0000111111
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPS------MREVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~ell~~ 1105 (1119)
+...+..+.+++.+||+.||++||+ ++++++|
T Consensus 225 --p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 225 --PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred --CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 1122346789999999999999998 5677665
No 102
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=325.76 Aligned_cols=244 Identities=27% Similarity=0.396 Sum_probs=203.2
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccc----ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNR----SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLF 915 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 915 (1119)
-++|+|.||+||-|++.++...+|||.+.. ..+...+|+..-+.++|.|||+++|.+.+++..-+.||-+|||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 479999999999999999999999998853 3345788999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC-CCCceEEEeccccccccCCCCCCcccc
Q 001226 916 NVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD-SELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 916 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
+.++..=....-.+.++..+.+||.+|+.|||+. .|||||||-+||+++ -.|.+||+|||-++..... ......
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--nP~TET 735 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--NPCTET 735 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC--Cccccc
Confidence 9998754333347788889999999999999999 999999999999996 4689999999999877543 334456
Q ss_pred cccCCCcccccccCCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 995 IVGSLGYIAPENAYST--RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
+.||..|||||++..+ .|+.++|||||||++.||.||++||............... +..-+.
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGm----------------yKvHP~ 799 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGM----------------YKVHPP 799 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcc----------------eecCCC
Confidence 7899999999998765 4889999999999999999999999765333222221111 112223
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRPSMREVVG 1104 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~ 1104 (1119)
.+...+.++..++.+|+.+||..||+++++++
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 45566778899999999999999999999986
No 103
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.1e-34 Score=334.45 Aligned_cols=249 Identities=24% Similarity=0.326 Sum_probs=197.0
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
.+|+..+.||+|+||.||+|.+..+++.||+|++.+ ....+.+|+.+++.++||||+++++++.++...|+||
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM 122 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 467778999999999999999999999999998853 1234678999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++|+|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 123 Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 123 EYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred cCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 999999999999754 378889999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCcccccccCCCcccccccCCC----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYST----RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
. ........||+.|+|||.+.+. .++.++||||+||++|||++|+.||...... ..+. ..
T Consensus 196 ~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~----~~~~-----------~i 259 (370)
T cd05621 196 G-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----GTYS-----------KI 259 (370)
T ss_pred C-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH----HHHH-----------HH
Confidence 2 1122345799999999987653 3788999999999999999999999643110 0010 01
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADM--RPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ell~~ 1105 (1119)
++.............+..+.+++.+|++.+|.+ ||+++|+++|
T Consensus 260 ~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 260 MDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 110000000111223456778899999865554 8999999998
No 104
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.3e-34 Score=334.24 Aligned_cols=197 Identities=26% Similarity=0.416 Sum_probs=172.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||+||+|.+..+++.||+|++++. ...+.+|+.+++.++||+|+++++.+.++...|+|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 356678999999999999999999999999998542 1346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 82 FLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999998754 489999999999999999999999 99999999999999999999999999987543211
Q ss_pred CC---------------------------------CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCC
Q 001226 988 SS---------------------------------STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMP 1034 (1119)
Q Consensus 988 ~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p 1034 (1119)
.. ......+||+.|+|||.+.+..++.++||||+||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 00 001235799999999999988999999999999999999999999
Q ss_pred CCC
Q 001226 1035 VDP 1037 (1119)
Q Consensus 1035 ~~~ 1037 (1119)
|..
T Consensus 236 f~~ 238 (363)
T cd05628 236 FCS 238 (363)
T ss_pred CCC
Confidence 964
No 105
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.3e-34 Score=316.55 Aligned_cols=253 Identities=28% Similarity=0.424 Sum_probs=202.5
Q ss_pred HHhhCCceeeecCCccEEEEEeCCC---ceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNS---RKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
.+|+..+.||+|+||.||+|....+ ...||||..+.. ..++.+|+..++.++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 3567789999999999999988643 457999988543 23567899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++++|.+++..... .+++..+.+++.|++.|++|||+. +|+||||||+||++++++.++++|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999987543 588999999999999999999998 999999999999999999999999999987752
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
...........++..|+|||...+..++.++||||+|+++|||++ |..||...... .. ..... ...
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~---~~~~~-~~~------- 225 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DV---IKAVE-DGY------- 225 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HH---HHHHH-cCC-------
Confidence 222222223345678999999988889999999999999999997 99998543111 00 00000 000
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
.. ..+...+..+.+++.+|++.+|++||+++||+++|+++
T Consensus 226 ---~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 ---RL--PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---CC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 00112345678999999999999999999999999876
No 106
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.3e-35 Score=332.45 Aligned_cols=239 Identities=25% Similarity=0.359 Sum_probs=194.0
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+.||+|+||.||++.+..+++.||+|+++.. ...+.+|+++++.++||||+++.+++..++..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999999999999999998542 234567889999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHY-DCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
+|.+++.... .+++..+..++.|++.|++|||+ . +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 152 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--AT 152 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cc
Confidence 9999887654 48999999999999999999997 6 99999999999999999999999999987532211 12
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||.....+ ........ .....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-----~~~~~i~~----------~~~~~-- 215 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILM----------EEIRF-- 215 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-----HHHHHHhc----------CCCCC--
Confidence 23356899999999999889999999999999999999999999643111 00000000 00000
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
+...+.++.+++.+|++.||++|+ ++++++++
T Consensus 216 --p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 --PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred --CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 111234678999999999999996 89999876
No 107
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-34 Score=328.88 Aligned_cols=239 Identities=23% Similarity=0.374 Sum_probs=192.5
Q ss_pred ceeeecCCccEEEEEeC---CCceEEEEEecccc--------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 840 RIIGKGKHGTVYRTLSN---NSRKHWAVKKLNRS--------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+.||+|+||.||+++.. .+++.||+|+++.. ...+.+|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999863 46789999988532 13456899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 154 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG- 154 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-
Confidence 99999999997654 378888999999999999999999 99999999999999999999999999987543211
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||...... .... ........
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~----------~~~~~~~~ 218 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTID----------KILKGKLN 218 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHH----------HHHcCCCC
Confidence 1223356899999999998888999999999999999999999999643110 0000 00011111
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
. +...+..+.+++.+|++.+|++|| ++++++++
T Consensus 219 ~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 219 L----PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred C----CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 0 111234678999999999999999 88988775
No 108
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.4e-34 Score=320.31 Aligned_cols=254 Identities=26% Similarity=0.438 Sum_probs=202.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-----CceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
.+|+..+.||+|+||.||+|.... +++.||+|+++.. ...+.+|+++++.++||||+++++++..+...+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 346666889999999999998753 3578999998542 346788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCce
Q 001226 904 IVTEYMPGGTLFNVLHQNEP-----------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEP 972 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~v 972 (1119)
+||||+++++|.++++..+. ...+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 99999999999999976432 23578889999999999999999999 99999999999999999999
Q ss_pred EEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhh
Q 001226 973 KIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRW 1051 (1119)
Q Consensus 973 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 1051 (1119)
|++|||+++...............+++.|+|||.+.+..++.++||||+||++|||++ |+.||...... ... ..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~---~~ 236 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVI---EC 236 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHH---HH
Confidence 9999999976543322222334456789999999999999999999999999999998 99998643211 111 00
Q ss_pred hhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1052 KLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
.. ..... ..+...+..+.+++.+||+.+|++||+++|+++.|++
T Consensus 237 ~~----------~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 237 IT----------QGRLL---QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HH----------cCCcC---CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 00 00000 0011234567899999999999999999999999864
No 109
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2e-34 Score=321.41 Aligned_cols=248 Identities=24% Similarity=0.298 Sum_probs=199.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..++||+|+||+||++.+..+++.||+|++... ...+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 45568899999999999999988999999988532 13456799999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++|+|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||++++++.++++|||++.......
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 82 MNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred cCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 99999998886543 23589999999999999999999999 99999999999999999999999999987653321
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......|+..|+|||.+.+..++.++||||+||++|||++|+.||........ ...... .+....
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-~~~~~~-----------~~~~~~- 221 (285)
T cd05605 157 --TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-REEVER-----------RVKEDQ- 221 (285)
T ss_pred --ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-HHHHHH-----------Hhhhcc-
Confidence 12234689999999999888899999999999999999999999974321100 000000 000000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
...+...+..+.+++.+||+.||++|| ++++++++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 --EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred --cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 011122345678999999999999999 89999776
No 110
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8.8e-35 Score=342.33 Aligned_cols=263 Identities=20% Similarity=0.245 Sum_probs=193.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecC--------CceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKD--------EHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~~~~lV~ 906 (1119)
+|+.+++||+|+||.||+|.+..+++.||||++........+|+.+++.++||||+++++++... ...++||
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 57778999999999999999999999999999876666677899999999999999999876432 2357899
Q ss_pred eccCCCCHHHhhccC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-ceEEEecccccccc
Q 001226 907 EYMPGGTLFNVLHQN-EPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-EPKIGDFGMSKLIS 984 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~vkl~DfGla~~~~ 984 (1119)
||+++ ++.+++... .....+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+|+...
T Consensus 147 E~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~ 222 (440)
T PTZ00036 147 EFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL 222 (440)
T ss_pred ecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence 99974 777776542 1233588999999999999999999999 999999999999999765 69999999998664
Q ss_pred CCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ...................+
T Consensus 223 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~~~~~~~~ 298 (440)
T PTZ00036 223 AGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPTEDQLKEM 298 (440)
T ss_pred CCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHh
Confidence 322 2223568999999998765 468999999999999999999999996532111 00000000000000000000
Q ss_pred cc-----cccCCCch------HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1064 DR-----EISFWDSD------DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1064 ~~-----~~~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+ .+...... +...+.++.+++.+||+.||.+|||+.|+++|
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 299 NPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred chhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00 00000000 01124578899999999999999999999966
No 111
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.9e-35 Score=336.97 Aligned_cols=249 Identities=27% Similarity=0.412 Sum_probs=201.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||+||+|++..+++.||||+++.. ...+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 456678999999999999999999999999998532 2357789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 82 YMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999998763 488999999999999999999998 99999999999999999999999999998664422
Q ss_pred ---------------------------CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 001226 988 ---------------------------SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFG 1040 (1119)
Q Consensus 988 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~ 1040 (1119)
.........||+.|+|||.+.+..++.++||||+||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 01122345789999999999999999999999999999999999999975321
Q ss_pred CCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 001226 1041 EDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPS-MREVVGF 1105 (1119)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ell~~ 1105 (1119)
. ..+.. ... . ....... .....+..+.+++.+|++ +|++||+ +++++++
T Consensus 236 ~----~~~~~--i~~------~-~~~~~~p--~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 Q----ETYNK--IIN------W-KESLRFP--PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred H----HHHHH--Hhc------c-CCcccCC--CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 1 00000 000 0 0000000 001134567899999997 9999999 9999986
No 112
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.5e-34 Score=315.47 Aligned_cols=252 Identities=27% Similarity=0.437 Sum_probs=201.5
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+|+..++||+|+||.||+|.... +..||+|.+... .+.+.+|+.+++.++|+||+++++++.+++..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 456777999999999999998765 577999988543 3467889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+........ .
T Consensus 85 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 159 (261)
T cd05072 85 KGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-T 159 (261)
T ss_pred CCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCce-e
Confidence 999999997653 23578889999999999999999998 999999999999999999999999999987654221 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||+.....++.++||||+||++|||++ |+.||...... ... .. ..... ...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~---~~-~~~~~--------~~~- 224 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVM---SA-LQRGY--------RMP- 224 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHH---HH-HHcCC--------CCC-
Confidence 1223345778999999988889999999999999999998 99998642111 100 00 00000 000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
.....+.++.+++.+|++.+|++||+++++.+.|+++
T Consensus 225 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 225 ---RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0011234678999999999999999999999999874
No 113
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2e-34 Score=322.61 Aligned_cols=262 Identities=22% Similarity=0.260 Sum_probs=192.2
Q ss_pred HhhCCceeeecCCccEEEEEeCC-CceEEEEEecccc------cccHHHHHHHHhhc---CCCCEEEEeeeee-----cC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNN-SRKHWAVKKLNRS------ETNFDVEIRTLSLV---RHRNILRIVGSCT-----KD 899 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~~vavK~~~~~------~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~~ 899 (1119)
+|+..+.||+|+||.||+|++.. +++.||+|+++.. ...+.+|+.+++.+ +||||+++++++. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 46677899999999999999854 4688999987532 12456677777765 6999999999885 24
Q ss_pred CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccc
Q 001226 900 EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGM 979 (1119)
Q Consensus 900 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGl 979 (1119)
...++||||++ ++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 56799999996 689999876542 2488999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhh-hccccc
Q 001226 980 SKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWK-LQENHE 1058 (1119)
Q Consensus 980 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 1058 (1119)
++..... .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||......+. ........ ......
T Consensus 157 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~-~~~i~~~~~~~~~~~ 232 (290)
T cd07862 157 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEED 232 (290)
T ss_pred eEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHHhCCCChhh
Confidence 9765432 223345689999999999888899999999999999999999999975321110 00000000 000000
Q ss_pred ccc---cccccccCCCc-----hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 CIC---FLDREISFWDS-----DDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~---~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
... .....+..... .....+..+.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000 00000000000 001234467899999999999999999999864
No 114
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.2e-34 Score=328.97 Aligned_cols=239 Identities=24% Similarity=0.341 Sum_probs=192.9
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
++||+|+||.||+|++..+++.||+|+++.. ...+..|.++++.+ +||||+++++++.+++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999999999999999998642 12355688888765 799999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~ 152 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VT 152 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC--cc
Confidence 99999987654 488899999999999999999999 99999999999999999999999999987543211 22
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... . ......... ...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--~---~~~~i~~~~--------~~~p--- 216 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--D---LFESILHDD--------VLYP--- 216 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--H---HHHHHHcCC--------CCCC---
Confidence 23456899999999999889999999999999999999999999743111 0 000000000 0001
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCC-------CHHHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRP-------SMREVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RP-------s~~ell~~ 1105 (1119)
...+.++.+++.+|++.||++|| ++++++++
T Consensus 217 ---~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 217 ---VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred ---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 11234678999999999999999 88888866
No 115
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=325.27 Aligned_cols=251 Identities=22% Similarity=0.361 Sum_probs=205.8
Q ss_pred HHHHHHhhCCceeeecCCccEEEEEeCCC---ceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCc
Q 001226 830 YEDVIRATEGRIIGKGKHGTVYRTLSNNS---RKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEH 901 (1119)
Q Consensus 830 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 901 (1119)
.+++..| ++||+|.||+|++|.+... ...||||.++.+ .++|.+|+.+|.+++|||+++++|++.+ ..
T Consensus 109 ee~i~l~---e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp 184 (1039)
T KOG0199|consen 109 EEQIKLY---ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QP 184 (1039)
T ss_pred HHHHHHH---HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence 3444444 6799999999999998753 246899998643 4679999999999999999999999987 77
Q ss_pred eEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccc
Q 001226 902 GFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSK 981 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~ 981 (1119)
..+|||.++.|+|.+.+++ ..+..+.......++.|||.||.||.++ ++||||+..+|+++-....|||+|||+.+
T Consensus 185 ~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmR 260 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMR 260 (1039)
T ss_pred hhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeeccccee
Confidence 8899999999999999998 3355688889999999999999999999 99999999999999999999999999999
Q ss_pred cccCCCCCC-cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccc
Q 001226 982 LISDSHSSS-TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHEC 1059 (1119)
Q Consensus 982 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1119)
-++..+..+ .......++.|+|||.+....++.++|||+|||++|||++ |+.||-+..+. .+
T Consensus 261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~----------------qI 324 (1039)
T KOG0199|consen 261 ALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI----------------QI 324 (1039)
T ss_pred ccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH----------------HH
Confidence 887664444 3345667889999999999999999999999999999996 88888654221 11
Q ss_pred cccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1060 ICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
.+.+|..-+. ..+..++.++++++..||..+|++|||+.+|.+.+
T Consensus 325 L~~iD~~erL--pRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 325 LKNIDAGERL--PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHhccccccC--CCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 1122211111 22344577899999999999999999999998544
No 116
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.7e-34 Score=328.14 Aligned_cols=241 Identities=25% Similarity=0.372 Sum_probs=191.5
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHH---hhcCCCCEEEEeeeeecCCceEEEE
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTL---SLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+..+.||+|+||.||+|.+..+++.||||+++.. ...+..|++++ +.++||||+++++++..++..|+||
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~ 81 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM 81 (324)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence 3457899999999999999999999999998532 12355566554 4567999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++++|..+++.. .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 82 E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 82 EYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred cCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999888643 489999999999999999999999 9999999999999999999999999998743221
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
........|++.|+|||.+.+..++.++||||+||++|||++|+.||...... . ..... ....
T Consensus 155 --~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--~---~~~~i----------~~~~ 217 (324)
T cd05589 155 --GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--E---VFDSI----------VNDE 217 (324)
T ss_pred --CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--H---HHHHH----------HhCC
Confidence 12233457899999999999889999999999999999999999998643111 0 00000 0000
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
.. .+...+..+.+++.+||+.||++|| ++++++++
T Consensus 218 ~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 218 VR----YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CC----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 00 0111245678999999999999999 57777765
No 117
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.8e-34 Score=326.25 Aligned_cols=238 Identities=26% Similarity=0.393 Sum_probs=190.3
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhh-cCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSL-VRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||.||+|++..+++.||+|+++.. ......|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999988643 2234567777765 4899999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AK 152 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--Cc
Confidence 99999997654 378899999999999999999999 99999999999999999999999999987532211 12
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..... ......
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~---~~i~~--------~~~~~~--- 216 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELF---QSIRM--------DNPCYP--- 216 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHH---HHHHh--------CCCCCC---
Confidence 2345689999999999988999999999999999999999999964311 0000 00000 001111
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMR-EVVG 1104 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ell~ 1104 (1119)
.....++.+++.+|++.+|++||++. ++.+
T Consensus 217 ---~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 217 ---RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred ---ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 11234678999999999999999997 6654
No 118
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.6e-34 Score=319.25 Aligned_cols=258 Identities=26% Similarity=0.430 Sum_probs=204.6
Q ss_pred HhhCCceeeecCCccEEEEEeC-----CCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSN-----NSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
.|...+.||+|+||.||++... .++..||+|.+... ...+.+|+.++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 85 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 4567788999999999999852 34567999988643 23578899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEE
Q 001226 906 TEYMPGGTLFNVLHQNEP----------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIG 975 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~ 975 (1119)
|||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++++
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl~ 162 (288)
T cd05093 86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIG 162 (288)
T ss_pred EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEec
Confidence 999999999999975431 22489999999999999999999998 99999999999999999999999
Q ss_pred eccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhc
Q 001226 976 DFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQ 1054 (1119)
Q Consensus 976 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1054 (1119)
|||.++...............++..|+|||.+.+..++.++|||||||++|||++ |..||...... .. .....
T Consensus 163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--~~---~~~i~- 236 (288)
T cd05093 163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EV---IECIT- 236 (288)
T ss_pred cCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HH---HHHHH-
Confidence 9999986643322222333445778999999988889999999999999999998 89888643211 00 00000
Q ss_pred ccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1055 ENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
. ..... .....+..+.+++.+||+.+|.+|||++++.+.|+++.++.
T Consensus 237 ~---------~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 237 Q---------GRVLQ---RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred c---------CCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 0 00000 00112346899999999999999999999999999998754
No 119
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.3e-34 Score=317.04 Aligned_cols=255 Identities=22% Similarity=0.386 Sum_probs=199.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCce----EEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRK----HWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
++...+.||+|+||+||+|.+..+++ +|++|.+.... .++..|+..++.+.||||+++++++.. ...++|
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 45566889999999999999876655 47888774321 345667778889999999999998764 457889
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
+||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||.++....
T Consensus 87 ~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 87 TQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999986543 489999999999999999999998 999999999999999999999999999986644
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
...........++..|+|||...+..++.++|||||||++||+++ |+.||....... .... .....
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~----~~~~~------- 228 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDL----LEKGE------- 228 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH----HHCCC-------
Confidence 332223334457789999999988899999999999999999998 999986432110 0000 00000
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
.... +...+.++.+++.+||..+|++|||+.|+++.|+++.++.
T Consensus 229 -~~~~----~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 229 -RLAQ----PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred -cCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 0000 0012345678999999999999999999999999987765
No 120
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.6e-34 Score=315.62 Aligned_cols=256 Identities=22% Similarity=0.330 Sum_probs=204.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||+|++..+++.||||.++.. ...+.+|+.+++.++||||+++++++.+.+..++|+|
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence 466778999999999999999989999999976421 2347789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 908 YMPGGTLFNVLHQNEP-RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
|+++++|.+++..... ...+++..+..++.|+++|++|||+. +++|+||||+||+++.++.++++|||.+......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 9999999998864322 23478889999999999999999998 9999999999999999999999999998865432
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
. .......+++.|+|||...+..++.++|+||+|+++|||++|+.||..... +...+..... . ..
T Consensus 160 ~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---~~~~~~~~~~-~---------~~ 224 (267)
T cd08228 160 T--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLFSLCQKIE-Q---------CD 224 (267)
T ss_pred h--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc---cHHHHHHHHh-c---------CC
Confidence 1 111234678899999999888899999999999999999999999854211 1111111100 0 00
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
. ........+..+.+++.+||+.+|++||+++++++.+++++
T Consensus 225 ~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 225 Y--PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred C--CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0 00111233457889999999999999999999999999864
No 121
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.2e-34 Score=347.74 Aligned_cols=259 Identities=24% Similarity=0.317 Sum_probs=203.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..++||+|+||.||+|.+..+++.||+|+++.. ...+.+|+++++.++||||+++++++.+++..++|||
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME 82 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP 82 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence 567779999999999999999999999999998542 2357789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccc
Q 001226 908 YMPGGTLFNVLHQNEP--------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGM 979 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGl 979 (1119)
|++||+|.+++..... ....++..+..++.||++|++|||+. +|+||||||+||+++.++.++++|||+
T Consensus 83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCc
Confidence 9999999999864211 12356778899999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC----------------CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 001226 980 SKLISDSHS----------------SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT 1043 (1119)
Q Consensus 980 a~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 1043 (1119)
++....... ........||+.|+|||.+.+..++.++||||+||++|||++|+.||........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 986621110 0111235699999999999999999999999999999999999999965211110
Q ss_pred ceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHccccc
Q 001226 1044 DIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRP-SMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ell~~L~~~~~~ 1112 (1119)
. ... ...... .. ......+..+.+++.+|++.||++|| +++++.+.++.+.+.
T Consensus 240 --~-~~~-~i~~P~--------~~----~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 240 --S-YRD-VILSPI--------EV----APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred --h-hhh-hccChh--------hc----cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 000 000000 00 00112345678999999999999995 678888888877554
No 122
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.3e-34 Score=326.63 Aligned_cols=193 Identities=30% Similarity=0.371 Sum_probs=170.8
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc---ccHHHHHHHHhhcC-C-----CCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---TNFDVEIRTLSLVR-H-----RNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~lV 905 (1119)
+|++.+.||+|.||.|.+|.+..+++.||||+++... .+-..|++++..++ | -|+|+++++|...++.|+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 6778899999999999999999999999999997654 35567999999886 3 3899999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC--ceEEEeccccccc
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL--EPKIGDFGMSKLI 983 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~--~vkl~DfGla~~~ 983 (1119)
+|.. ..+|+++++.+..+ .++...++.++.||+.||..||+. +|||+||||+|||+...+ .|||+|||.|+..
T Consensus 267 fELL-~~NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 267 FELL-STNLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred ehhh-hhhHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999 67999999988754 599999999999999999999999 999999999999997654 6999999999977
Q ss_pred cCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDP 1037 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 1037 (1119)
..... ..+.+..|+|||++.+.+|+.+.||||||||++||++|..-|.+
T Consensus 342 ~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 342 SQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred CCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 55322 45668899999999999999999999999999999999766543
No 123
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=310.34 Aligned_cols=240 Identities=23% Similarity=0.349 Sum_probs=204.2
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
.+.||+|.|++|-+|++.-+|++||||++.+.+ ..+..|++.|+.++|||||+++++.......|+|+|.-++|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~G 102 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG 102 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCc
Confidence 467999999999999999999999999996543 34678999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC-CCCceEEEeccccccccCCCCCCc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD-SELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
+|+||+.++.. .+.+.-+.+++.||+.|+.|+|.. .+||||+||+||.+- .-|-||+.|||++-.+.. ...
T Consensus 103 Dl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P---G~k 174 (864)
T KOG4717|consen 103 DLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP---GKK 174 (864)
T ss_pred hHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC---cch
Confidence 99999998865 488999999999999999999998 899999999998764 568999999999977644 344
Q ss_pred ccccccCCCcccccccCCCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLT-EKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
....+|...|-|||.+.+..|+ +++||||+||++|.+++|+.||...... +.+..++|=..
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS---------------ETLTmImDCKY--- 236 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS---------------ETLTMIMDCKY--- 236 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch---------------hhhhhhhcccc---
Confidence 5567899999999999999886 6899999999999999999999743211 12222333222
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.-+...+.++.++|..|+..||.+|.+.+||+.+
T Consensus 237 -tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 237 -TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred -cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 2344567789999999999999999999999865
No 124
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.9e-35 Score=319.26 Aligned_cols=246 Identities=35% Similarity=0.533 Sum_probs=190.4
Q ss_pred CceeeecCCccEEEEEeC----CCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 839 GRIIGKGKHGTVYRTLSN----NSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~----~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
.+.||+|+||.||+|.+. ..+..|+||.++.. ...+.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 468999999999999988 44678999999532 356888999999999999999999999888899999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++|+|.++++... ...+++..+..++.|+++|+.|||+. +++|+||+++||++++++.+||+|||++.........
T Consensus 84 ~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 84 PGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccc-cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999999999872 22489999999999999999999999 9999999999999999999999999999876332222
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
...........|+|||.+....++.++||||||+++||+++ |+.||.... ..+ ..... ..... ..
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~--~~~---~~~~~-~~~~~--------~~ 225 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD--NEE---IIEKL-KQGQR--------LP 225 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC--HHH---HHHHH-HTTEE--------TT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--ccc---ccccc-ccccc--------ce
Confidence 33344557789999999988889999999999999999999 678875431 111 11000 00000 00
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
.+...+..+.+++.+||+.+|++||+++++++.|
T Consensus 226 ----~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ----IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0111245678999999999999999999999876
No 125
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.2e-34 Score=342.75 Aligned_cols=251 Identities=24% Similarity=0.299 Sum_probs=200.3
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC-------
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE------- 900 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 900 (1119)
.+|+..+.||+|+||+||+|.+..+++.||||+++.. ...+.+|+..+..++|+|++++.+.+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 3777889999999999999999999999999998532 234678999999999999999988765432
Q ss_pred -ceEEEEeccCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 901 -HGFIVTEYMPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 901 -~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
..++||||+++|+|.++++... ....+++..+..++.|++.|+.|+|+. +|+||||||+||+++.++.+||+|||
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecc
Confidence 3589999999999999987543 223588999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccc
Q 001226 979 MSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHE 1058 (1119)
Q Consensus 979 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1119)
+++...............||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ........
T Consensus 189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-----~~~~~~~~----- 258 (496)
T PTZ00283 189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-----EEVMHKTL----- 258 (496)
T ss_pred cCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHh-----
Confidence 99876543323333456799999999999999999999999999999999999999964211 00100000
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..... ..+...+.++.+++.+||+.+|++||++.+++++
T Consensus 259 -----~~~~~---~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 -----AGRYD---PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -----cCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 00000 0111234568899999999999999999999875
No 126
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.2e-34 Score=335.51 Aligned_cols=249 Identities=24% Similarity=0.366 Sum_probs=196.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||+||+|++..+++.||||+++.. ...+.+|+.+++.++||||+++++++.++...|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 355678999999999999999999999999998642 1346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++.......
T Consensus 82 ~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 82 YLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999998654 489999999999999999999999 99999999999999999999999999987543211
Q ss_pred CCC------------------------------------cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhC
Q 001226 988 SSS------------------------------------TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFR 1031 (1119)
Q Consensus 988 ~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg 1031 (1119)
... .....+||+.|+|||++.+..++.++||||+||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 000 01124689999999999888999999999999999999999
Q ss_pred CCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 001226 1032 KMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPS---MREVVGF 1105 (1119)
Q Consensus 1032 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ell~~ 1105 (1119)
+.||....... ......... ..+.. ......+..+.+++.+|+. +|.+|++ ++|++++
T Consensus 236 ~~Pf~~~~~~~-----~~~~i~~~~--------~~~~~--~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 236 YPPFCSDNPQE-----TYRKIINWK--------ETLQF--PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCHHH-----HHHHHHcCC--------CccCC--CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99996432110 000000000 00000 0001123466789999996 9999998 9998875
No 127
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6e-35 Score=333.02 Aligned_cols=249 Identities=22% Similarity=0.354 Sum_probs=198.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|...+.||+|+||.||+|.+..+++.||+|+++.. ...+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 355668999999999999999999999999998642 2347789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++..... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 82 YQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999987632 488999999999999999999999 99999999999999999999999999998664322
Q ss_pred CCCcccccccCCCcccccccC------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAY------STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
.. ......||+.|+|||.+. ...++.++||||+||++|||++|+.||...... ..+.. ....
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~----~~~~~--i~~~----- 224 (330)
T cd05601 157 MV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA----KTYNN--IMNF----- 224 (330)
T ss_pred ce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH----HHHHH--HHcC-----
Confidence 21 223346899999999876 456789999999999999999999999643111 00000 0000
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+.... ......+..+.+++.+|++ +|++||++++++++
T Consensus 225 --~~~~~~--~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 225 --QRFLKF--PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred --CCccCC--CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000000 0111234567899999998 99999999999875
No 128
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.1e-34 Score=318.76 Aligned_cols=258 Identities=26% Similarity=0.433 Sum_probs=205.5
Q ss_pred HhhCCceeeecCCccEEEEEeCC-----CceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
+|...+.||+|+||.||+|.... ++..|++|.++... ..+.+|+..+++++||||+++++++..+...++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 45666889999999999998543 35678999986432 4588899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCce
Q 001226 906 TEYMPGGTLFNVLHQNEP-------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEP 972 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~v 972 (1119)
|||+++++|.+++..... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcE
Confidence 999999999999976432 23478999999999999999999999 99999999999999999999
Q ss_pred EEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhh
Q 001226 973 KIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRW 1051 (1119)
Q Consensus 973 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 1051 (1119)
+++|||++................++..|+|||.+.+..++.++||||+||++|||++ |+.||....... . + ..
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~--~-~~ 237 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--V--I-EC 237 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H--H-HH
Confidence 9999999976544322223334556789999999988899999999999999999998 999986432110 0 0 00
Q ss_pred hhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1052 KLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
.. ..... ......+..+.+++.+||+.+|++||++++|++.|+++....
T Consensus 238 ~~----------~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 238 IT----------QGRVL---ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred Hh----------CCCCC---CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 00 00000 001122456789999999999999999999999999986543
No 129
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.2e-34 Score=325.64 Aligned_cols=238 Identities=26% Similarity=0.380 Sum_probs=189.9
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhh-cCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSL-VRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
++||+|+||.||+|+++.+++.||+|+++.. ......|..++.. .+||+|+++++++.+++..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999999999999999998642 2235567777765 4899999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||+++..... ...
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNR 152 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCc
Confidence 99999987654 488899999999999999999999 9999999999999999999999999998743221 112
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ... +.... .. .+....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~--~~~~~-~~--------~~~~~~-- 217 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DEL--FESIR-VD--------TPHYPR-- 217 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHH--HHHHH-hC--------CCCCCC--
Confidence 2345689999999999999999999999999999999999999964311 100 00000 00 011111
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMR-EVVG 1104 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ell~ 1104 (1119)
....++.+++.+|++.||++||++. ++.+
T Consensus 218 ----~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 218 ----WITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred ----CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1234678999999999999999985 5653
No 130
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5e-34 Score=316.77 Aligned_cols=243 Identities=24% Similarity=0.310 Sum_probs=192.6
Q ss_pred eeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
||+|+||.||+++.+.+++.||+|++... ......|+.+++.++||||+++.+++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999988532 22345699999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~ 153 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQ 153 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeec
Confidence 988865442 3488999999999999999999999 99999999999999999999999999987654321 2223
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
..++..|+|||++.+..++.++||||+||++|||++|+.||........ ........ ....... ..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~~~----------~~~~~~~---~~ 219 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKRRT----------LEDEVKF---EH 219 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHHHh----------hcccccc---cc
Confidence 4689999999999888899999999999999999999999864321111 00000000 0001100 01
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...+.++.+++.+||+.||++||+++|+++.
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 1234467899999999999999999766543
No 131
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.7e-34 Score=329.54 Aligned_cols=248 Identities=24% Similarity=0.317 Sum_probs=194.6
Q ss_pred hhCCceeeecCCccEEEEEeC---CCceEEEEEecccc--------cccHHHHHHHHhhcC-CCCEEEEeeeeecCCceE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSN---NSRKHWAVKKLNRS--------ETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~--------~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 903 (1119)
|+..+.||+|+||.||+++.. .+++.||+|++++. ...+..|+.+++.++ ||+|+++++++..++..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 556789999999999998764 46889999988532 134667999999994 999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 82 lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 82 LILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999997654 488999999999999999999999 9999999999999999999999999999765
Q ss_pred cCCCCCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
..... .......||+.|+|||.+.+. .++.++||||+||++|||++|+.||......... .........
T Consensus 156 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-~~~~~~~~~-------- 225 (332)
T cd05614 156 LSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ-SEVSRRILK-------- 225 (332)
T ss_pred cccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH-HHHHHHHhc--------
Confidence 33221 122345789999999988765 4788999999999999999999999643211110 011110000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
.+..+ +...+..+.+++.+|++.||++|| ++++++++
T Consensus 226 ~~~~~------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 226 CDPPF------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCCC------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 01111 112244678999999999999999 78888875
No 132
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.7e-34 Score=319.53 Aligned_cols=256 Identities=25% Similarity=0.436 Sum_probs=202.2
Q ss_pred HHhhCCceeeecCCccEEEEEeCCC-----ceEEEEEeccccc-----ccHHHHHHHHhhc-CCCCEEEEeeeeecCCce
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNS-----RKHWAVKKLNRSE-----TNFDVEIRTLSLV-RHRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~-----~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 902 (1119)
.+|+..+.||+|+||.||++..... ...||+|.+.... ..+.+|+.+++++ +||||+++++++..++..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 3566778999999999999987643 3789999886432 2467899999999 799999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC
Q 001226 903 FIVTEYMPGGTLFNVLHQNE-------------PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE 969 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 969 (1119)
++||||+++|+|.++++... ....+++..+.+++.|++.|++|||+. +|+||||||+||+++.+
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTED 168 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCC
Confidence 99999999999999997532 234588999999999999999999998 99999999999999999
Q ss_pred CceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeeh
Q 001226 970 LEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTW 1048 (1119)
Q Consensus 970 ~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 1048 (1119)
+.+|++|||.++...............++..|+|||...+..++.++|||||||++||+++ |..||...... ...
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~-- 244 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--ELF-- 244 (293)
T ss_pred CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--HHH--
Confidence 9999999999987654332222223345678999999888889999999999999999997 88888543111 000
Q ss_pred hhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1049 TRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
... ...... ..+...+..+.+++.+|++.+|++|||++|+++.|+++.
T Consensus 245 -~~~-----------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 -KLL-----------KEGYRM--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -HHH-----------HcCCcC--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 000 000000 011122446789999999999999999999999999875
No 133
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.3e-34 Score=325.97 Aligned_cols=239 Identities=28% Similarity=0.369 Sum_probs=193.4
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||+||+|.++.+++.||+|++++. ...+..|+.+++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999998642 23356788888877 699999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VT 152 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--Cc
Confidence 99999987654 489999999999999999999999 99999999999999999999999999986432211 12
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....|++.|+|||.+.+..++.++||||+||++|||++|+.||..... . ....... .....
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~---~~~~~i~----------~~~~~--- 214 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--D---ELFQSIL----------EDEVR--- 214 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--H---HHHHHHH----------cCCCC---
Confidence 2334689999999999999999999999999999999999999964311 0 0000000 00000
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSM-----REVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ell~~ 1105 (1119)
.+...+..+.+++.+||+.||++||++ .+++++
T Consensus 215 -~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 215 -YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred -CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 011224567899999999999999999 888765
No 134
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.4e-34 Score=336.02 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=194.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..++||+|+||.||+|.+..+++.||||++... ...+.+|+++++.++||||+++++++.++...|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 356678999999999999999999999999988532 2346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 82 FLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999997654 488889999999999999999999 99999999999999999999999999986432110
Q ss_pred CC------------C---------------------------------cccccccCCCcccccccCCCCCCCcchHHHHH
Q 001226 988 SS------------S---------------------------------TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYG 1022 (1119)
Q Consensus 988 ~~------------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG 1022 (1119)
.. . .....+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 0 00124699999999999888999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCC---CCCH
Q 001226 1023 VILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADM---RPSM 1099 (1119)
Q Consensus 1023 ~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~---RPs~ 1099 (1119)
|++|||++|+.||......+. ......+. ..+.. ......+..+.+++.+|++ +|.+ |+++
T Consensus 236 vil~elltG~~Pf~~~~~~~~-~~~i~~~~------------~~~~~--p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHET-YRKIINWR------------ETLYF--PDDIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHH-HHHHHccC------------CccCC--CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 999999999999964321100 00000000 00000 0011123467799999997 6666 4699
Q ss_pred HHHHHH
Q 001226 1100 REVVGF 1105 (1119)
Q Consensus 1100 ~ell~~ 1105 (1119)
+|++++
T Consensus 300 ~~~l~h 305 (377)
T cd05629 300 HEIKSH 305 (377)
T ss_pred HHHhcC
Confidence 999886
No 135
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.5e-34 Score=313.86 Aligned_cols=251 Identities=27% Similarity=0.456 Sum_probs=204.1
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
.+|+..++||+|+||.||+|.+.. ++.||+|++... ..++.+|+.+++.++||||+++++++.+....++||||+
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 356777899999999999999988 889999998643 346788999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.++++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||.+.........
T Consensus 85 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 85 EKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred ccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 99999999987542 3589999999999999999999998 9999999999999999999999999999866442211
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.....++..|+|||......++.++||||+|+++|+|++ |+.||...... .... ... ....
T Consensus 161 --~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~--~~~------------~~~~ 222 (261)
T cd05148 161 --SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYD--QIT------------AGYR 222 (261)
T ss_pred --ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHH--HHH------------hCCc
Confidence 223446778999999988889999999999999999998 89998643210 0000 000 0000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
. ..+...+..+.+++.+||+.+|++|||++++.+.|+.+
T Consensus 223 ~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 M--PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred C--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0 01122345678999999999999999999999999864
No 136
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.6e-34 Score=336.10 Aligned_cols=248 Identities=23% Similarity=0.361 Sum_probs=193.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..++||+|+||+||+|++..+++.||+|++... ...+.+|+.+++.++||||+++++++.+++..|+||||
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~ 82 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 82 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence 55668999999999999999999999999998542 23577899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++|+|.+++.+.+ .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 83 IPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999997654 478889999999999999999999 999999999999999999999999999753210000
Q ss_pred ---------------------------------------------CCcccccccCCCcccccccCCCCCCCcchHHHHHH
Q 001226 989 ---------------------------------------------SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGV 1023 (1119)
Q Consensus 989 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~ 1023 (1119)
.......+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00012346899999999999889999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCC---HH
Q 001226 1024 ILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPS---MR 1100 (1119)
Q Consensus 1024 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ 1100 (1119)
++|||++|+.||........ ......+ ...... ......+.++.+++.+|+ .+|++|++ ++
T Consensus 237 il~elltG~~Pf~~~~~~~~-~~~i~~~------------~~~~~~--p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLET-QMKVINW------------QTSLHI--PPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHH-HHHHHcc------------CCCcCC--CCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 99999999999964321100 0000000 000000 001112345567777765 59999997 88
Q ss_pred HHHHH
Q 001226 1101 EVVGF 1105 (1119)
Q Consensus 1101 ell~~ 1105 (1119)
++++|
T Consensus 301 ei~~h 305 (382)
T cd05625 301 EIKAH 305 (382)
T ss_pred HHhcC
Confidence 88765
No 137
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.7e-34 Score=311.65 Aligned_cols=248 Identities=24% Similarity=0.431 Sum_probs=198.6
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+++..+.||+|+||.||+|.++. +..+|+|++... ..++.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 456777889999999999998864 668999988643 3467889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++...+... .
T Consensus 83 ~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-~ 156 (256)
T cd05059 83 NGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-T 156 (256)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc-c
Confidence 9999999986543 489999999999999999999999 999999999999999999999999999876543211 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||...+..++.++||||+|+++||+++ |+.||...... .. ... .... .. .
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~--~~~--~~~~------~~--~-- 220 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EV--VES--VSAG------YR--L-- 220 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HH--HHH--HHcC------Cc--C--
Confidence 1112234568999999988899999999999999999998 89988643111 10 000 0000 00 0
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
..+...+..+.+++.+||+.+|++|||++|+++.|
T Consensus 221 --~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 221 --YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 01112345788999999999999999999999986
No 138
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.3e-34 Score=314.54 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=195.0
Q ss_pred hCCceeeecCCccEEEEEeCCCce--EEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC------Cce
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRK--HWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD------EHG 902 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~--~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 902 (1119)
..+++||+|+||.||+|.+...+. .||+|.++.. ...+.+|+.+++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 346889999999999999877664 6899987532 24577899999999999999999987432 246
Q ss_pred EEEEeccCCCCHHHhhccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNE---PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGM 979 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGl 979 (1119)
++||||+++|+|.+++.... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 89999999999998874321 123488999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccc
Q 001226 980 SKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHE 1058 (1119)
Q Consensus 980 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1119)
++...............+++.|+|||...+..++.++||||+|+++|||++ |+.||..... ... +.. .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~--~~~--~~~~~- 231 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEI--YDY--LRQGN- 231 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHH--HHH--HHcCC-
Confidence 987654332222233456778999999998899999999999999999998 7888854211 110 000 00000
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
.... ....+..+.+++.+||+.+|++|||++++++.|+++
T Consensus 232 -------~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 -------RLKQ----PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -------CCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000 011234578999999999999999999999999875
No 139
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1e-33 Score=327.76 Aligned_cols=257 Identities=25% Similarity=0.420 Sum_probs=200.8
Q ss_pred HHhhCCceeeecCCccEEEEEeC-----CCceEEEEEeccccc-----ccHHHHHHHHhhcC-CCCEEEEeeeeecCCce
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSN-----NSRKHWAVKKLNRSE-----TNFDVEIRTLSLVR-HRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 902 (1119)
.++..++.||+|+||.||+|.++ ..++.||+|+++... ..+..|++++.++. ||||+++++++...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 35667789999999999999864 345689999996432 24678999999997 99999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCCC-----------------------------------------------------------
Q 001226 903 FIVTEYMPGGTLFNVLHQNEP----------------------------------------------------------- 923 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 923 (1119)
++||||+++|+|.++++..+.
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 999999999999999975421
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC
Q 001226 924 ------------------------------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD 967 (1119)
Q Consensus 924 ------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 967 (1119)
...+++..+.+++.|++.|++|||+. +++||||||+||+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEe
Confidence 12367778899999999999999998 999999999999999
Q ss_pred CCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCcee
Q 001226 968 SELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIV 1046 (1119)
Q Consensus 968 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~ 1046 (1119)
+++.+|++|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||......+. .
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-~- 351 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-F- 351 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-H-
Confidence 999999999999986543222122223456889999999988889999999999999999998 8889854311100 0
Q ss_pred ehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1047 TWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
.... .+..+. ..+...+.++.+++.+||+.+|++||+++||++.|+++.
T Consensus 352 ---~~~~----------~~~~~~--~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 ---YNAI----------KRGYRM--AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ---HHHH----------HcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0000 000000 001112457889999999999999999999999999864
No 140
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.7e-34 Score=316.06 Aligned_cols=254 Identities=27% Similarity=0.410 Sum_probs=200.1
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-----CceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
..|+..+.||+|+||.||+|.+.. ++..||+|.+... ...+.+|+.+++.++|+||+++++++.+.+..+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence 346667899999999999999877 6788999988532 235788999999999999999999999888999
Q ss_pred EEEeccCCCCHHHhhccCCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC---ceEEEe
Q 001226 904 IVTEYMPGGTLFNVLHQNEP----RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL---EPKIGD 976 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~vkl~D 976 (1119)
+||||+++++|.++++.... ...+++..+.+++.||+.|++|||+. +++||||||+||+++.++ .+|++|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEecc
Confidence 99999999999999976542 12588999999999999999999999 999999999999998764 589999
Q ss_pred ccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcc
Q 001226 977 FGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQE 1055 (1119)
Q Consensus 977 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1055 (1119)
||+++................+..|+|||++.+..++.++||||+||++|||++ |+.||...... ... ...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~---~~~--- 234 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVM---EFV--- 234 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHH---HHH---
Confidence 999987643222222222334568999999998899999999999999999996 99998643111 100 000
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1056 NHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
...... ..+...+..+.+++.+|++.+|++||++.+|+++|+.
T Consensus 235 --------~~~~~~--~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 235 --------TGGGRL--DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred --------HcCCcC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 000000 0011224567899999999999999999999999863
No 141
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9.3e-34 Score=314.30 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=197.5
Q ss_pred hCCceeeecCCccEEEEEeCCC---ceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCc------
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNS---RKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEH------ 901 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 901 (1119)
..++.||+|+||.||+|..... +..||+|+++.. ...+.+|+..++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 4568899999999999987643 478999988633 2357789999999999999999998866544
Q ss_pred eEEEEeccCCCCHHHhhccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 902 GFIVTEYMPGGTLFNVLHQNE---PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
.++||||+++|+|.+++.... ....+++..+..++.|++.|++|+|+. +++||||||+||++++++.+|++|||
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCcc
Confidence 699999999999999985432 223589999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccc
Q 001226 979 MSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENH 1057 (1119)
Q Consensus 979 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1119)
+++................+..|+|||......++.++||||+||++|||++ |..||...... .. .......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~---~~~~~~~-- 231 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EI---YDYLRHG-- 231 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HH---HHHHHcC--
Confidence 9987654332222223345678999999988889999999999999999998 88887542111 11 0100000
Q ss_pred cccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1058 ECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
... ..+...+..+.+++.+||+.||++||++.|++++|+++
T Consensus 232 -------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 -------NRL----KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -------CCC----CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 01112345788999999999999999999999999875
No 142
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.2e-33 Score=311.27 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=201.0
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+++..+.||+|+||.||+|.+.. ++.||+|.++.. ..++.+|+.++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred heeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 46667899999999999998765 578999998643 34678899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||++++++.++++|||+++....... ..
T Consensus 86 ~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~ 160 (261)
T cd05068 86 GSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY-EA 160 (261)
T ss_pred CcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-cc
Confidence 99999997654 23589999999999999999999999 999999999999999999999999999987653221 11
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
......+..|+|||+..+..++.++||||+|+++|||++ |+.||...... ...... .+....
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~------------~~~~~~- 223 (261)
T cd05068 161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA----EVLQQV------------DQGYRM- 223 (261)
T ss_pred cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHHH------------HcCCCC-
Confidence 112223468999999988889999999999999999999 99998643110 000000 000000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
......+..+.+++.+|++.+|++||+++++++.|+.+
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 -PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred -CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 01112345788999999999999999999999999864
No 143
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.3e-34 Score=318.06 Aligned_cols=255 Identities=22% Similarity=0.323 Sum_probs=199.6
Q ss_pred HHhhCCceeeecCCccEEEEEeCCC-----ceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNS-----RKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
.+|...+.||+|+||.||+|.+..+ ++.||+|+++... ..+.+|+.+++.++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 3455567899999999999987543 5789999986432 34778999999999999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC
Q 001226 904 IVTEYMPGGTLFNVLHQNE-------------PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL 970 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 970 (1119)
+++||+++++|.+++.... ....+++..+..++.|++.|++|+|+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 9999999999999985321 123478888999999999999999999 999999999999999999
Q ss_pred ceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehh
Q 001226 971 EPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWT 1049 (1119)
Q Consensus 971 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 1049 (1119)
.+|++|||+++...............+++.|+|||.+.++.++.++||||+||++|||++ |..||..... .+ ..
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~---~~ 236 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QD---VI 236 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--HH---HH
Confidence 999999999886644332222233456789999999988889999999999999999998 8888754211 11 11
Q ss_pred hhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1050 RWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
.... +..... .+...+..+.+++.+||+.+|++||++++|++.|+.+
T Consensus 237 ~~i~----------~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 283 (283)
T cd05091 237 EMIR----------NRQVLP---CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRTW 283 (283)
T ss_pred HHHH----------cCCcCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhCC
Confidence 1100 000000 0112345678999999999999999999999998753
No 144
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.2e-34 Score=336.54 Aligned_cols=248 Identities=24% Similarity=0.364 Sum_probs=194.5
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..+.||+|+||.||+|++..+++.||+|++... ...+.+|+.+++.++||||+++++.+.+++..|+||||
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~ 82 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeC
Confidence 56678999999999999999999999999998532 23477899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC-
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH- 987 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~- 987 (1119)
+++|+|.+++...+ .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 83 IPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 99999999997754 478889999999999999999999 99999999999999999999999999975321000
Q ss_pred ----------------------------------------CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHH
Q 001226 988 ----------------------------------------SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFE 1027 (1119)
Q Consensus 988 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~e 1027 (1119)
.........||+.|+|||++.+..++.++||||+||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 0000123479999999999999899999999999999999
Q ss_pred HHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCC---CHHHHHH
Q 001226 1028 LLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRP---SMREVVG 1104 (1119)
Q Consensus 1028 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---s~~ell~ 1104 (1119)
|++|+.||......+.. .....+.. . ..... ....+..+.+++.+|+ .+|.+|+ ++.|+++
T Consensus 237 ll~G~~Pf~~~~~~~~~-~~i~~~~~----~------~~~~~----~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 237 MLVGQPPFLADTPAETQ-LKVINWET----T------LHIPS----QAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhhCCCCCCCCCHHHHH-HHHhccCc----c------ccCCC----CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 99999999753211100 00000000 0 00000 0112345667788876 5999999 8999987
Q ss_pred H
Q 001226 1105 F 1105 (1119)
Q Consensus 1105 ~ 1105 (1119)
+
T Consensus 301 h 301 (376)
T cd05598 301 H 301 (376)
T ss_pred C
Confidence 7
No 145
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2e-34 Score=327.36 Aligned_cols=234 Identities=26% Similarity=0.363 Sum_probs=186.9
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHH-HHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIR-TLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||+||+|.+..+++.||+|++.... ..+..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999999999999999985321 22334443 45778999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SKT 152 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CCc
Confidence 99999987654 488899999999999999999999 9999999999999999999999999998753221 122
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||..... ...... ........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~----------i~~~~~~~-- 215 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDN----------ILNKPLRL-- 215 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHH----------HHcCCCCC--
Confidence 3345689999999999998999999999999999999999999964311 000000 00111111
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMR 1100 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 1100 (1119)
....+..+.+++.+|++.||++||+++
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 --KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred --CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 111245678999999999999999984
No 146
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.7e-34 Score=317.42 Aligned_cols=256 Identities=25% Similarity=0.413 Sum_probs=201.1
Q ss_pred hhCCceeeecCCccEEEEEeCC-----CceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
|+..+.||+|+||.||+|.... ....||+|.+.... .++.+|+.+++.++||||+++++.+..++..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 4556889999999999998653 23568999875432 3577899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 001226 906 TEYMPGGTLFNVLHQNE---------------------PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNI 964 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 964 (1119)
+||+++++|.+++.... ....+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ni 158 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNV 158 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheE
Confidence 99999999999986432 113478899999999999999999998 999999999999
Q ss_pred EeCCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCC
Q 001226 965 LLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDT 1043 (1119)
Q Consensus 965 ll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~ 1043 (1119)
++++++.+|++|||+++...............++..|+|||...+..++.++||||||+++|||++ |+.||......
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-- 236 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE-- 236 (290)
T ss_pred EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH--
Confidence 999999999999999986543322222233345778999999888889999999999999999998 99998643111
Q ss_pred ceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1044 DIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
.... .+.+.... ..+...+.++.+++.+|++.+|++||+++++++.|+++..+
T Consensus 237 ~~~~--------------~~~~~~~~--~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 237 RLFN--------------LLKTGYRM--ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred HHHH--------------HHhCCCCC--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 0000 00000000 01112345788999999999999999999999999988654
No 147
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-35 Score=320.08 Aligned_cols=243 Identities=26% Similarity=0.372 Sum_probs=198.2
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..+.||.|.||.||-|++..+.+.||||++.. ...++..|++.++.++|||+|.+-|+|..+...|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4445789999999999999999999999999942 234678899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
| -|+-.|++.-++. ++.+.++..|..+.++|++|||+. +.||||||+.||++++.|.||++|||.|....+
T Consensus 108 C-lGSAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 108 C-LGSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred H-hccHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 9 5677777766543 578889999999999999999999 999999999999999999999999999986643
Q ss_pred CCcccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
...++|||.|||||++. .+.|+-++||||+|++..|+..+++|+..+..-. .+ + .++.--.+
T Consensus 179 ---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-AL--Y---------HIAQNesP 243 (948)
T KOG0577|consen 179 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-AL--Y---------HIAQNESP 243 (948)
T ss_pred ---hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HH--H---------HHHhcCCC
Confidence 34578999999999875 5889999999999999999999999976431100 00 0 00000011
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
.+. ...-+..+..++..|++.-|.+|||.+++++|-=
T Consensus 244 tLq-----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 244 TLQ-----SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRF 280 (948)
T ss_pred CCC-----CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcch
Confidence 111 1122556789999999999999999999998743
No 148
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=8.1e-34 Score=311.36 Aligned_cols=249 Identities=24% Similarity=0.426 Sum_probs=199.0
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+|+..+.||+|+||+||+|.... +..||+|.++.. .+++.+|+.++++++||||+++++++.+....++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 466777899999999999998765 456999988643 3467889999999999999999999998889999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++..... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+|++|||.++....... .
T Consensus 83 ~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~ 156 (256)
T cd05113 83 NGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-T 156 (256)
T ss_pred CCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce-e
Confidence 9999999976543 489999999999999999999999 999999999999999999999999999876544221 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||...+..++.++|||||||++|||++ |+.||...... .... ..... ...
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~---~~~~~-----------~~~ 220 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVE---KVSQG-----------LRL 220 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHH---HHhcC-----------CCC
Confidence 1122345678999999988889999999999999999998 99998643211 0000 00000 000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
......+..+.+++.+||+.+|++||++.++++.++
T Consensus 221 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 --YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 001112457789999999999999999999998864
No 149
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.6e-34 Score=325.43 Aligned_cols=243 Identities=26% Similarity=0.344 Sum_probs=193.2
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCC-CCEEEEeeeeecCCceEEEEe
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRH-RNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e 907 (1119)
|+..+.||+|+||.||+|.+..+++.||+|+++.. ...+..|+++++.++| ++|+++++++.+.+..|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 45568899999999999999999999999988532 2345678888888876 568889999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 82 YVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred CCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 999999999987654 378899999999999999999999 9999999999999999999999999998643211
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ..... .....
T Consensus 155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~---~~~~i----------~~~~~ 218 (324)
T cd05587 155 -GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--E---LFQSI----------MEHNV 218 (324)
T ss_pred -CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--H---HHHHH----------HcCCC
Confidence 11223456899999999999989999999999999999999999999643111 0 00000 00000
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSM-----REVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ell~~ 1105 (1119)
.. +...+..+.+++.+|++.+|.+|++. +++.++
T Consensus 219 ~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 219 SY----PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CC----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00 11123467899999999999999976 676654
No 150
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.7e-34 Score=324.57 Aligned_cols=265 Identities=20% Similarity=0.254 Sum_probs=198.1
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+.+|+..+.||+|+||.||+|+++.+++.||+|+++.. ...+.+|+.++++++||||+++++++..++..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 34577789999999999999999998999999988532 2346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++ ++.+++..... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 85 YLDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 9974 88888876543 478889999999999999999999 99999999999999999999999999987543321
Q ss_pred CCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccc------ccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENH------ECI 1060 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~ 1060 (1119)
.......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+............... ...
T Consensus 159 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 159 --KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred --cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 12233467899999998765 568899999999999999999999996532111100000000000000 000
Q ss_pred ccccccccCCC-----chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 CFLDREISFWD-----SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 ~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...+....... ......+.++.+++.+|++.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000000000 0011234567899999999999999999999874
No 151
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.2e-34 Score=320.25 Aligned_cols=261 Identities=25% Similarity=0.405 Sum_probs=204.4
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-------CceEEEEEeccccc-----ccHHHHHHHHhhc-CCCCEEEEeeeeecCC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-------SRKHWAVKKLNRSE-----TNFDVEIRTLSLV-RHRNILRIVGSCTKDE 900 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~~-----~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 900 (1119)
.+|..++.||+|+||.||+|.+.. +...||+|.++... .++..|+.+++.+ +||||+++++++..++
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 478888999999999999998643 23569999986432 2466799999999 7999999999999999
Q ss_pred ceEEEEeccCCCCHHHhhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEP-------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD 967 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 967 (1119)
..|+||||+++|+|.+++....+ ...+++.++.+++.|++.|++|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 99999999999999999976532 12488999999999999999999998 999999999999999
Q ss_pred CCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCcee
Q 001226 968 SELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIV 1046 (1119)
Q Consensus 968 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~ 1046 (1119)
.++.+|++|||.++...............+++.|+|||...+..++.++||||+||++|||++ |..||..... .
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-----~ 249 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----E 249 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----H
Confidence 999999999999876543221111222234568999999988889999999999999999998 8888753211 0
Q ss_pred ehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCCC
Q 001226 1047 TWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNEG 1115 (1119)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 1115 (1119)
..... ... .... ..+...+.++.+++.+|++.+|++||++.++++.|+++.+....
T Consensus 250 ~~~~~-~~~----------~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~~ 305 (307)
T cd05098 250 ELFKL-LKE----------GHRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSN 305 (307)
T ss_pred HHHHH-HHc----------CCCC--CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhhc
Confidence 00000 000 0000 01112345778999999999999999999999999998776544
No 152
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1e-33 Score=314.69 Aligned_cols=254 Identities=26% Similarity=0.433 Sum_probs=202.0
Q ss_pred HHhhCCceeeecCCccEEEEEeCCC-----ceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNS-----RKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
.+|+..+.||+|+||.||+|.++.. +..||+|.+.... ..+.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 4667779999999999999987653 3789999985432 35778999999999999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEe
Q 001226 904 IVTEYMPGGTLFNVLHQNEP-------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGD 976 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~D 976 (1119)
+||||+++++|.+++..... ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+|++|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECC
Confidence 99999999999999975432 22478889999999999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcc
Q 001226 977 FGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQE 1055 (1119)
Q Consensus 977 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1055 (1119)
||+++...............++..|+|||...++.++.++|||||||++||+++ |+.||...... ... .... .
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~---~~~~-~ 236 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVL---KFVI-D 236 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHH---HHHh-c
Confidence 999986654332223334456789999999988889999999999999999998 89888542111 110 0000 0
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1056 NHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
. . .... +...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 237 ~-~-----~~~~------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 237 G-G-----HLDL------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred C-C-----CCCC------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 0 0 0000 11124578899999999999999999999999864
No 153
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-33 Score=312.85 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=199.6
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
.+|+..+.||+|+||.||+|.+..+++.||+|+.... ...+.+|+.++++++||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4677889999999999999999988999999988532 234678999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.++++... .+++..+..++.|++.|+.|||+. +|+|||++|+||+++.++.++++|||++.......
T Consensus 89 ~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 89 GGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 9999999987654 478999999999999999999998 99999999999999999999999999998654321
Q ss_pred CcccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
.......++..|+|||.+. ...++.++||||+||++|||++|+.||......... ..+..... ..+.
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~~~~~~---------~~~~ 230 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMSKSNF---------QPPK 230 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eeeecCCC---------CCCC
Confidence 1223346888999999874 345788999999999999999999998643221111 11000000 0000
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
.. .....+..+.+++.+||+.+|++||+++++++++
T Consensus 231 ~~----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LK----DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred Cc----cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00 0112235678999999999999999999999864
No 154
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.3e-33 Score=314.77 Aligned_cols=264 Identities=27% Similarity=0.424 Sum_probs=199.1
Q ss_pred hCCceeeecCCccEEEEE----eCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecC--CceEEE
Q 001226 837 TEGRIIGKGKHGTVYRTL----SNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGFIV 905 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~----~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV 905 (1119)
...+.||+|+||+||++. ...+++.||+|.++.. ...+.+|+.+++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 566889999999998765 3346788999988643 23567899999999999999999987653 457899
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++++|.+++... .+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++++|||+++....
T Consensus 87 ~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 87 MEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 9999999999999764 389999999999999999999999 999999999999999999999999999986654
Q ss_pred CCCC-CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSS-STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
.... .......++..|+|||...+..++.++||||+|+++|||++|+.||........+........ ..........+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 238 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQ-MTVVRLIELLE 238 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccc-cchhhhhhhhh
Confidence 2221 112223456679999999888899999999999999999999999864322111111100000 00000111111
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
..... ..+...+..+.+++.+||+.+|++|||++++++.|+++.
T Consensus 239 ~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 239 RGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11110 011223457899999999999999999999999999874
No 155
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-33 Score=318.05 Aligned_cols=261 Identities=23% Similarity=0.405 Sum_probs=205.1
Q ss_pred HHHhhCCceeeecCCccEEEEEeC-------CCceEEEEEecccc-----cccHHHHHHHHhhc-CCCCEEEEeeeeecC
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSN-------NSRKHWAVKKLNRS-----ETNFDVEIRTLSLV-RHRNILRIVGSCTKD 899 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~~~vavK~~~~~-----~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 899 (1119)
..+|+.++.||+|+||.||+|++. ..+..||+|.++.. ..++.+|+.+++.+ +||||+++++++..+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 356778899999999999999753 23457999988642 23577899999999 899999999999999
Q ss_pred CceEEEEeccCCCCHHHhhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEe
Q 001226 900 EHGFIVTEYMPGGTLFNVLHQNEP-------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILL 966 (1119)
Q Consensus 900 ~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill 966 (1119)
+..++||||+++|+|.+++..... ...+++.++..++.|+++|+.|||+. +++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 999999999999999999976432 23578889999999999999999999 99999999999999
Q ss_pred CCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCce
Q 001226 967 DSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDI 1045 (1119)
Q Consensus 967 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~ 1045 (1119)
+.++.+|++|||.++...............+++.|+|||...+..++.++||||+|+++||+++ |..||.....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----- 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----
Confidence 9999999999999987654332222233446778999999988889999999999999999998 7888753211
Q ss_pred eehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1046 VTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
...... ...... . ..+...+..+.+++.+||+.+|++||++.|+++.|+++.+-..
T Consensus 246 ~~~~~~-~~~~~~--------~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~ 301 (304)
T cd05101 246 EELFKL-LKEGHR--------M----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT 301 (304)
T ss_pred HHHHHH-HHcCCc--------C----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence 011100 000000 0 0011234567899999999999999999999999999876543
No 156
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-33 Score=318.44 Aligned_cols=263 Identities=26% Similarity=0.430 Sum_probs=204.4
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-------CceEEEEEeccccc-----ccHHHHHHHHhhc-CCCCEEEEeeeeecCC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-------SRKHWAVKKLNRSE-----TNFDVEIRTLSLV-RHRNILRIVGSCTKDE 900 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~~-----~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 900 (1119)
.+|..+++||+|+||.||+|.+.. ....||+|.++... ..+..|+.+++.+ +||||+++++++.+++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 467788999999999999997532 34579999886432 3467899999999 6999999999999999
Q ss_pred ceEEEEeccCCCCHHHhhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEP-------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD 967 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 967 (1119)
..++||||+++|+|.+++..... ...+++.++..++.|++.|+.|||+. |++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 99999999999999999976431 13488999999999999999999998 999999999999999
Q ss_pred CCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCcee
Q 001226 968 SELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIV 1046 (1119)
Q Consensus 968 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~ 1046 (1119)
.++.+|++|||.++...............++..|+|||.+.+..++.++||||+||++|||++ |+.||...... ...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~ 246 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--ELF 246 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--HHH
Confidence 999999999999986644322222222234567999999988889999999999999999998 88888542110 000
Q ss_pred ehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCCCCC
Q 001226 1047 TWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNEGGM 1117 (1119)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~ 1117 (1119)
.... ... ... .....+.++.+++.+|++.+|++||++.|+++.|+++....+.+|
T Consensus 247 ---~~~~-~~~--------~~~----~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 301 (314)
T cd05099 247 ---KLLR-EGH--------RMD----KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEY 301 (314)
T ss_pred ---HHHH-cCC--------CCC----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCc
Confidence 0000 000 000 011223467899999999999999999999999999886555443
No 157
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.5e-34 Score=322.92 Aligned_cols=245 Identities=22% Similarity=0.328 Sum_probs=193.4
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||.||+|.+..+++.||+|+++.. ...+.+|+.++.++ +||+|+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999998642 12366788888887 699999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--GDT 152 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC--CCc
Confidence 99999887654 489999999999999999999999 9999999999999999999999999998753221 122
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC-ceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT-DIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ......... ........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~---------~~~~~~~~- 222 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV---------ILEKPIRI- 222 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH---------HHhCCCCC-
Confidence 2345789999999999999999999999999999999999999964322111 110000000 00111110
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPS------MREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~ell~~ 1105 (1119)
+...+..+.+++.+|++.||++||+ ++++++|
T Consensus 223 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 223 ---PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred ---CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 1112345689999999999999998 4577655
No 158
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.1e-33 Score=313.86 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=203.0
Q ss_pred HHHhhCCceeeecCCccEEEEEeCC-----CceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCce
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 902 (1119)
..+|+..++||+|+||.||+|..++ .+..||+|.++... ..+.+|+..++.++||||+++++++.+....
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 3577888999999999999997653 35689999875332 2467799999999999999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEE
Q 001226 903 FIVTEYMPGGTLFNVLHQNEP-------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIG 975 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~ 975 (1119)
++||||+++|+|.++++.... ....++..+..++.|++.|++|||+. +|+||||||+||++++++.++++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 999999999999999975321 23456778899999999999999999 99999999999999999999999
Q ss_pred eccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhc
Q 001226 976 DFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQ 1054 (1119)
Q Consensus 976 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1054 (1119)
|||+++...............++..|+|||...++.++.++||||+||++|||++ |+.||.....+ .......
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~~- 235 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVLKFVM- 235 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH-
Confidence 9999886544332222333345778999999988889999999999999999998 78887542111 1111100
Q ss_pred ccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1055 ENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
+..... .+...+..+.+++.+|++.+|++|||+.++++.+++....+
T Consensus 236 ---------~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~ 282 (288)
T cd05061 236 ---------DGGYLD---QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 282 (288)
T ss_pred ---------cCCCCC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCC
Confidence 000000 01112357899999999999999999999999998865443
No 159
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.4e-34 Score=323.86 Aligned_cols=243 Identities=25% Similarity=0.343 Sum_probs=193.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEe
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
|+..+.||+|+||.||+|++..+++.||+|++++.. ..+..|..++... +|++|+++++++.+.+..|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 455688999999999999999999999999886421 2345577777766 58999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~- 154 (323)
T cd05616 82 YVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD- 154 (323)
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC-
Confidence 999999999987654 388999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. .... .....
T Consensus 155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~---~~~i----------~~~~~ 218 (323)
T cd05616 155 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--EL---FQSI----------MEHNV 218 (323)
T ss_pred -CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HH---HHHH----------HhCCC
Confidence 11223456899999999999999999999999999999999999999643111 00 0000 01111
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSM-----REVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ell~~ 1105 (1119)
. .+...+.++.+++.+|++.+|++|++. +++.++
T Consensus 219 ~----~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 219 A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred C----CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 1 011234567899999999999999984 666654
No 160
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-33 Score=328.80 Aligned_cols=262 Identities=21% Similarity=0.253 Sum_probs=198.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
.|...+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++|+|||++++++..++..++|||++ .++|
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~~~L 246 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-RSDL 246 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-CCCH
Confidence 4666789999999999999999999999999643 335678999999999999999999999999999999999 4789
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++..... .+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 247 ~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 247 YTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred HHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 888876432 589999999999999999999999 999999999999999999999999999986643222222334
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC------ceeehhhhhhccccccccc------
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT------DIVTWTRWKLQENHECICF------ 1062 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------ 1062 (1119)
..||+.|+|||++.+..++.++|||||||++|||++|..|+........ .+.................
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~ 401 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence 5799999999999999999999999999999999998876543221110 0000000000000000000
Q ss_pred ---cc---c----cc--cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 ---LD---R----EI--SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ---~~---~----~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.. . .. ..| .........+.+++.+||+.||.+|||++|++++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 402 SQYRHRAARNRRPAYTRPAW-TRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHhhhhcccCCccCCcch-hhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 0 00 001 0001223467899999999999999999999986
No 161
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-33 Score=320.98 Aligned_cols=196 Identities=23% Similarity=0.411 Sum_probs=161.8
Q ss_pred CceeeecCCccEEEEEeCC--CceEEEEEecccc--cccHHHHHHHHhhcCCCCEEEEeeeeec--CCceEEEEeccCCC
Q 001226 839 GRIIGKGKHGTVYRTLSNN--SRKHWAVKKLNRS--ETNFDVEIRTLSLVRHRNILRIVGSCTK--DEHGFIVTEYMPGG 912 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~g 912 (1119)
+++||+|+||+||+|.++. +++.||+|+++.. .....+|+.++++++||||+++++++.. +...++||||++ +
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-H 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-C
Confidence 5789999999999999653 5688999998643 3457789999999999999999998854 456789999995 5
Q ss_pred CHHHhhccCC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEe----CCCCceEEEecccccc
Q 001226 913 TLFNVLHQNE------PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILL----DSELEPKIGDFGMSKL 982 (1119)
Q Consensus 913 sL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~vkl~DfGla~~ 982 (1119)
++.+++.... ....+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 8888875432 122588999999999999999999999 99999999999999 4567899999999987
Q ss_pred ccCCCC-CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001226 983 ISDSHS-SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPS 1038 (1119)
Q Consensus 983 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~ 1038 (1119)
...... ........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 643221 122334678999999998876 45899999999999999999999999754
No 162
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.1e-34 Score=313.28 Aligned_cols=256 Identities=21% Similarity=0.316 Sum_probs=204.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||+|....+++.||||.+.. ...++.+|+.+++.++||||+++++++.+++..++|||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 45666889999999999999988899999997743 12457789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 908 YMPGGTLFNVLHQNEP-RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
|+++++|.+++..... ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||.+......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 9999999999875322 33589999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
.. ......++..|+|||...+..++.++|+||+|+++|||++|..||.....+ ......... ....+.
T Consensus 160 ~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~-------~~~~~~ 227 (267)
T cd08229 160 TT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIE-------QCDYPP 227 (267)
T ss_pred Cc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhhh-------cCCCCC
Confidence 21 122346888999999998888999999999999999999999998643111 111110000 000000
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
. .....+..+.+++.+||+.+|++|||+++|+++++++-
T Consensus 228 ~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 228 L-----PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred C-----CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 11123457889999999999999999999999999874
No 163
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.7e-33 Score=310.38 Aligned_cols=247 Identities=28% Similarity=0.386 Sum_probs=198.5
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc---------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
|..++.||+|++|.||+|.+..++++||+|++... ...+.+|+.++++++||||+++++++.+++..++|+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 83 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM 83 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence 55678999999999999999988999999987432 134778999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.++.....
T Consensus 84 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 84 EYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 9999999999988654 378889999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCCc-ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 987 HSSST-RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 987 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
..... .....++..|+|||...+..++.++||||+|+++|||++|+.||...... ..... ..... ...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~-~~~~~------~~~ 226 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFK-IATQP------TNP 226 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHH-HhccC------CCC
Confidence 11111 12345788999999999888999999999999999999999998642110 00000 00000 000
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+......+.+++.+||+.+|++|||++|++++
T Consensus 227 ------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 227 ------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1112234567899999999999999999999876
No 164
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.9e-33 Score=315.83 Aligned_cols=261 Identities=28% Similarity=0.393 Sum_probs=201.1
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCc----------------eEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSR----------------KHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRI 892 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~----------------~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l 892 (1119)
.+|+..+.||+|+||.||+|.+...+ ..||+|++... ...+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 35677789999999999998876533 56899998643 3457789999999999999999
Q ss_pred eeeeecCCceEEEEeccCCCCHHHhhccCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 001226 893 VGSCTKDEHGFIVTEYMPGGTLFNVLHQNEP--------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNI 964 (1119)
Q Consensus 893 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 964 (1119)
++++..++..++||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhce
Confidence 9999999999999999999999999976541 12488999999999999999999998 999999999999
Q ss_pred EeCCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh--CCCCCCCCCCCC
Q 001226 965 LLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF--RKMPVDPSFGED 1042 (1119)
Q Consensus 965 ll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt--g~~p~~~~~~~~ 1042 (1119)
+++.++.++++|||.++...............+++.|+|||...+..++.++|||||||++|||++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-- 239 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-- 239 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh--
Confidence 999999999999999876544332223334456789999999888889999999999999999998 6777753211
Q ss_pred CceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1043 TDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
... +..... ......... ........+.++.+++.+|++.+|++|||++||++.|++
T Consensus 240 ~~~--~~~~~~-----~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 QQV--IENAGH-----FFRDDGRQI--YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHH--HHHHHh-----ccccccccc--cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 110 000000 000000000 000111233578999999999999999999999998864
No 165
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.2e-33 Score=310.44 Aligned_cols=251 Identities=29% Similarity=0.368 Sum_probs=189.7
Q ss_pred ceeeecCCccEEEEEeCC--CceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNN--SRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+.||+|+||.||+|.... ++..+|+|.++... ..+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 468999999999998643 45679999886432 35778999999999999999999999989999999999999
Q ss_pred CHHHhhccCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 913 TLFNVLHQNEP--RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 913 sL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+|.++++.... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999976432 22466778889999999999999999 99999999999999999999999999987654332222
Q ss_pred cccccccCCCcccccccCCC-------CCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 991 TRSAIVGSLGYIAPENAYST-------RLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
......++..|+|||++... .++.++||||||+++|||++ |+.||......+ .... ... ......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~---~~~--~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTY---TVR--EQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHH---Hhh--cccCCC
Confidence 23344578899999987532 35789999999999999996 999986432111 1000 000 000001
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
.++... ......+.+++..|+ .+|++|||++||++.|+
T Consensus 231 ~~~~~~------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLK------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccC------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111111 112335678999999 68999999999998874
No 166
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.5e-33 Score=316.88 Aligned_cols=255 Identities=23% Similarity=0.403 Sum_probs=201.7
Q ss_pred HHhhCCceeeecCCccEEEEEe-----CCCceEEEEEeccccc-----ccHHHHHHHHhhc-CCCCEEEEeeeeecCCce
Q 001226 834 IRATEGRIIGKGKHGTVYRTLS-----NNSRKHWAVKKLNRSE-----TNFDVEIRTLSLV-RHRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 902 (1119)
.++...+.||+|+||.||+|.+ ..++..||+|.++... ..+.+|+.+++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 3677789999999999999975 3345689999886432 3477899999999 799999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
++||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||+++.
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999999976442 2389999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
..............++..|+|||.+.+..++.++||||+||++|||++ |..||....... ......
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~----~~~~~~--------- 257 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS----KFYKLI--------- 257 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH----HHHHHH---------
Confidence 543222112223346788999999998889999999999999999998 999986432110 000000
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
...... ..+...+..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 258 --~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 258 --KEGYRM--AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --HcCCcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 000000 00111234688999999999999999999999999875
No 167
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-33 Score=314.28 Aligned_cols=257 Identities=24% Similarity=0.402 Sum_probs=201.3
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCce----EEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRK----HWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~----~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 904 (1119)
.+++..++||+|+||+||+|.+..+++ +||+|+++.. ...+.+|+..++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence 355667899999999999998766555 5899988532 23567899999999999999999998754 5679
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
++||+++|+|.++++.... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 ~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999986542 488999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
............+++.|+|||...+..++.++|||||||++|||++ |..||..... .....+.. ...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~----~~~------ 228 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLE----KGE------ 228 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH----CCC------
Confidence 3222212222345678999999988889999999999999999998 8888864311 11110000 000
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
.. ..+...+.++.+++.+||+.||++||++.++++.++++..+.+
T Consensus 229 --~~----~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05109 229 --RL----PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPS 273 (279)
T ss_pred --cC----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCc
Confidence 00 0011234567899999999999999999999999999877664
No 168
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.9e-34 Score=328.68 Aligned_cols=250 Identities=24% Similarity=0.343 Sum_probs=196.5
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
.+|+..+.||+|+||.||+|+++.+++.||+|++.+. ...+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 122 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 5778889999999999999999999999999998531 234668999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++|+|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 123 Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 123 EYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred cCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 999999999998754 378888999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCcccccccCCCcccccccCCC----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYST----RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
. ........||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+.... ...
T Consensus 196 ~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~----~~~~~~i~-~~~------ 263 (371)
T cd05622 196 G-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----VGTYSKIM-NHK------ 263 (371)
T ss_pred C-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH----HHHHHHHH-cCC------
Confidence 2 1122345799999999987643 378999999999999999999999964311 00111100 000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADM--RPSMREVVGFL 1106 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ell~~L 1106 (1119)
..+.. ......+..+.+++.+|++..+.+ ||+++|++++.
T Consensus 264 --~~~~~--~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 264 --NSLTF--PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred --CcccC--CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 00000 111123456788999999844443 78999999874
No 169
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.2e-33 Score=308.23 Aligned_cols=246 Identities=25% Similarity=0.410 Sum_probs=195.3
Q ss_pred ceeeecCCccEEEEEeCCCc---eEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSR---KHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~---~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
++||+|+||.||+|.+..++ ..||+|.+.... .++.+|+.+++.+.||||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999876544 789999986433 35778999999999999999999876 4567999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC-
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS- 990 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~- 990 (1119)
++|.+++.... .+++..+..++.|++.|++|||.. +++||||||+||+++.++.+|++|||.++.........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 99999998765 488999999999999999999998 99999999999999999999999999998664432211
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||...+..++.++||||||+++|||++ |+.||....+ .... ...... .. .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~---~~~~~~-~~--------~-- 217 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVI---AMLESG-ER--------L-- 217 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHH---HHHHcC-Cc--------C--
Confidence 1112234568999999988889999999999999999997 9999864321 1111 111000 00 0
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
..+...+..+.+++.+|++.+|++||++.++++.|+++.
T Consensus 218 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 --PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 001122356789999999999999999999999999864
No 170
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=9.1e-34 Score=324.54 Aligned_cols=259 Identities=26% Similarity=0.412 Sum_probs=199.3
Q ss_pred HHhhCCceeeecCCccEEEEEeC-----CCceEEEEEeccccc-----ccHHHHHHHHhhc-CCCCEEEEeeeeecC-Cc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSN-----NSRKHWAVKKLNRSE-----TNFDVEIRTLSLV-RHRNILRIVGSCTKD-EH 901 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~~-----~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 901 (1119)
.+|...+.||+|+||.||+|.+. .+++.||||+++... ..+.+|+.++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 36777899999999999999843 457889999986422 3466899999999 689999999988654 56
Q ss_pred eEEEEeccCCCCHHHhhccCCC----------------------------------------------------------
Q 001226 902 GFIVTEYMPGGTLFNVLHQNEP---------------------------------------------------------- 923 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 923 (1119)
.++||||+++|+|.++++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999999865321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCccccccc
Q 001226 924 ------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVG 997 (1119)
Q Consensus 924 ------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~g 997 (1119)
...+++..+.+++.|+++|++|||+. +|+||||||+||+++.++.+|++|||++................+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 12367888899999999999999999 999999999999999999999999999986543222222223345
Q ss_pred CCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHH
Q 001226 998 SLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQL 1076 (1119)
Q Consensus 998 t~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1119)
++.|+|||...+..++.++||||+|+++|||++ |..||....... . ... ...... ...... .
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~---~~~-~~~~~~------~~~~~~------~ 306 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E---FCR-RLKEGT------RMRAPD------Y 306 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-H---HHH-HHhccC------CCCCCC------C
Confidence 678999999988889999999999999999996 898886431110 0 000 000000 000000 1
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1077 KALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1077 ~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
.+.++.+++.+||+.+|++|||+.||+++|+++.++
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 224678999999999999999999999999998765
No 171
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.5e-34 Score=319.24 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=201.0
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCce--EEEEEecccc-----cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRK--HWAVKKLNRS-----ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~--~vavK~~~~~-----~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 904 (1119)
+.+|+..+.||+|+||.||+|.++.++. .+|+|.++.. ...+.+|+.++.++ +||||+++++++.+++..|+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 3456777899999999999999877664 4688876532 23577899999999 89999999999999999999
Q ss_pred EEeccCCCCHHHhhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCc
Q 001226 905 VTEYMPGGTLFNVLHQNEP-------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELE 971 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 971 (1119)
||||+++++|.++++.... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 9999999999999975431 12578999999999999999999998 9999999999999999999
Q ss_pred eEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhh
Q 001226 972 PKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTR 1050 (1119)
Q Consensus 972 vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 1050 (1119)
+|++|||++..... ........++..|+|||...+..++.++|||||||++|||++ |..||...... +. ..
T Consensus 163 ~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~---~~ 234 (303)
T cd05088 163 AKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--EL---YE 234 (303)
T ss_pred EEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HH---HH
Confidence 99999999864321 111112234678999999888889999999999999999998 99998643211 10 00
Q ss_pred hhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1051 WKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
. ..... ... .....+..+.+++.+||+.+|++||++++++++++++.....
T Consensus 235 ~-~~~~~--------~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 235 K-LPQGY--------RLE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred H-HhcCC--------cCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 0 00000 000 011123467899999999999999999999999998776654
No 172
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-33 Score=314.73 Aligned_cols=269 Identities=27% Similarity=0.374 Sum_probs=197.5
Q ss_pred HhhCCceeeecCCccEEEEEe----CCCceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEEeeeeec--CCceEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLS----NNSRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRIVGSCTK--DEHGFI 904 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 904 (1119)
+++..+.||+|+||.||++.. ..+++.||+|++.... ..+.+|+.+++.++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 345568899999999999974 4467899999986432 357889999999999999999998743 346799
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++...
T Consensus 85 v~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 85 VMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999976532 488999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCC-cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 985 DSHSSS-TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 985 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
...... ......++..|+|||...+..++.++||||+||++|||++|..|+.........................+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 432211 1112234556999999988889999999999999999999887654321100000000000000000000111
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
...... ......+..+.+++.+||+.+|++|||++||++.|++++
T Consensus 240 ~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 240 KNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 111110 011123456889999999999999999999999999764
No 173
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.8e-33 Score=309.75 Aligned_cols=252 Identities=27% Similarity=0.419 Sum_probs=199.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+|+..++||+|+||.||+|.+..+ ..||+|+++.. ...+.+|+.++++++||||+++++++.+ ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 4678889999999999999988765 46999998643 2457889999999999999999998754 56799999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+|+|.+++..... ..+++..+..++.|++.|++|+|+. +++||||||+||+++.++.++++|||.++....... .
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~ 158 (262)
T cd05071 84 KGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 158 (262)
T ss_pred CCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc-c
Confidence 9999999986432 2478999999999999999999999 999999999999999999999999999976644221 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||+..+..++.++||||+|+++|||++ |+.||...... . ... .... ....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--~--~~~--~~~~----------~~~~ 222 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--E--VLD--QVER----------GYRM 222 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--H--HHH--HHhc----------CCCC
Confidence 2223346778999999888889999999999999999999 88887543111 0 000 0000 0000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
......+..+.+++.+|++.+|++||+++++.+.|+.+.
T Consensus 223 --~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 223 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred --CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 011233457789999999999999999999999998753
No 174
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.7e-35 Score=296.16 Aligned_cols=277 Identities=22% Similarity=0.328 Sum_probs=205.7
Q ss_pred CCCCHHHHHHhhCCceeeecCCccEEEEEeCCCc----eEEEEEecccccc------cHHHHHHHHhhcCCCCEEEEeee
Q 001226 826 RDLRYEDVIRATEGRIIGKGKHGTVYRTLSNNSR----KHWAVKKLNRSET------NFDVEIRTLSLVRHRNILRIVGS 895 (1119)
Q Consensus 826 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~----~~vavK~~~~~~~------~~~~E~~~l~~l~h~niv~l~~~ 895 (1119)
++.+.+++..|.....||+|.||.||+|..+++. +.+|||+++..++ ...+|+..++.++||||+.++.+
T Consensus 16 er~rve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~V 95 (438)
T KOG0666|consen 16 ERERVEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKV 95 (438)
T ss_pred hhhhHHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHH
Confidence 3456688899999999999999999999765543 3789999976532 35789999999999999999999
Q ss_pred eec-CCceEEEEeccCCCCHHHhhccCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC---
Q 001226 896 CTK-DEHGFIVTEYMPGGTLFNVLHQNEP--RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE--- 969 (1119)
Q Consensus 896 ~~~-~~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~--- 969 (1119)
+.. +...++++||.+. +|.++++.+.. ...++...++.++.||+.|+.|||++ =|+|||+||.|||+..+
T Consensus 96 fl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgpe 171 (438)
T KOG0666|consen 96 FLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPE 171 (438)
T ss_pred HhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCc
Confidence 977 8889999999965 78888875432 34688889999999999999999999 69999999999999887
Q ss_pred -CceEEEeccccccccCC-CCCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCc--
Q 001226 970 -LEPKIGDFGMSKLISDS-HSSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTD-- 1044 (1119)
Q Consensus 970 -~~vkl~DfGla~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~-- 1044 (1119)
|.|||+|+|+++.+... .+.......+.|.+|+|||.+.+. .|+.+.||||+||++.||+|-+.-|.........
T Consensus 172 rG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~ 251 (438)
T KOG0666|consen 172 RGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKN 251 (438)
T ss_pred cCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCC
Confidence 89999999999988654 233355678899999999988764 6899999999999999999987666432111110
Q ss_pred ------------------eeehhhhhhcccc-ccccccccc------ccCCCchHHHHHHHHHHHHHHccccCCCCCCCH
Q 001226 1045 ------------------IVTWTRWKLQENH-ECICFLDRE------ISFWDSDDQLKALRLLELALECTRQVADMRPSM 1099 (1119)
Q Consensus 1045 ------------------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 1099 (1119)
...|...+..... .....+... +..|.......+....+++.++++.||.+|.|+
T Consensus 252 Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta 331 (438)
T KOG0666|consen 252 PFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITA 331 (438)
T ss_pred CchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccH
Confidence 0112111111111 000000000 000000011112237899999999999999999
Q ss_pred HHHHHHH
Q 001226 1100 REVVGFL 1106 (1119)
Q Consensus 1100 ~ell~~L 1106 (1119)
++.+++-
T Consensus 332 ~qAleh~ 338 (438)
T KOG0666|consen 332 EQALEHP 338 (438)
T ss_pred HHHhccc
Confidence 9998763
No 175
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-33 Score=325.77 Aligned_cols=258 Identities=26% Similarity=0.337 Sum_probs=195.4
Q ss_pred HHHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC-----
Q 001226 832 DVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE----- 900 (1119)
Q Consensus 832 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 900 (1119)
-+.+|+..+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 356888889999999999999999999999999998532 234678999999999999999999886543
Q ss_pred -ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccc
Q 001226 901 -HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGM 979 (1119)
Q Consensus 901 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGl 979 (1119)
..|+||||+++ ++.+.++. .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 46999999965 56666542 377888999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccc--
Q 001226 980 SKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENH-- 1057 (1119)
Q Consensus 980 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 1057 (1119)
++..... .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||......+ .+.........
T Consensus 170 a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~----~~~~~~~~~~~~~ 242 (359)
T cd07876 170 ARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID----QWNKVIEQLGTPS 242 (359)
T ss_pred ccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCc
Confidence 9754321 22234578999999999999999999999999999999999999997532110 00000000000
Q ss_pred ---------ccccccc-----------ccccCC-----CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1058 ---------ECICFLD-----------REISFW-----DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1058 ---------~~~~~~~-----------~~~~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....+.. .....+ ..........+.+++.+|++.||++|||++|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 000000 00111224567899999999999999999999987
No 176
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.9e-33 Score=308.70 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=192.9
Q ss_pred eeeecCCccEEEEEe--CCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 841 IIGKGKHGTVYRTLS--NNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 841 ~lG~G~fg~Vy~~~~--~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
.||+|+||.||+|.+ ..++..||+|+++.. .+++.+|+.+++.++||||+++++++. ++..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999965 455788999988533 235778999999999999999999885 45678999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC-c
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS-T 991 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~-~ 991 (1119)
+|.+++.... .+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+|++|||.+.......... .
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 9999997654 488999999999999999999998 99999999999999999999999999998764432211 1
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.....++..|+|||......++.++|+|||||++|||++ |+.||...... .... . ...... ...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~---~-i~~~~~------~~~--- 219 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQ---M-IESGER------MEC--- 219 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH---H-HHCCCC------CCC---
Confidence 122334678999999888888999999999999999998 99998643111 1110 0 000000 000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
+...+.++.+++.+||+.||++||++++|++.|+.+
T Consensus 220 ---~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 ---PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ---CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 112345678999999999999999999999999875
No 177
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-33 Score=315.28 Aligned_cols=260 Identities=24% Similarity=0.259 Sum_probs=192.7
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhc---CCCCEEEEeeeeec-----CCc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLV---RHRNILRIVGSCTK-----DEH 901 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~~ 901 (1119)
|+..+.||+|+||+||+|.++.+++.||+|.++.. ...+.+|+.+++.+ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 56678999999999999999999999999988532 12456777777665 69999999998764 245
Q ss_pred eEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccc
Q 001226 902 GFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSK 981 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~ 981 (1119)
.++||||++ ++|.+++..... ..+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+|++|||+++
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 799999997 589888876542 3489999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehh---------hhh
Q 001226 982 LISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWT---------RWK 1052 (1119)
Q Consensus 982 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~---------~~~ 1052 (1119)
...... ......+|..|+|||++.+..++.++||||+||++|||++|+.||......+. ..... .|.
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH-HHHHHHHhCCCChhhCc
Confidence 664321 22334678999999999888899999999999999999999999864321110 00000 000
Q ss_pred hccccccccccccc-ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1053 LQENHECICFLDRE-ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1053 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...... ...+.+. ...........+..+.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLP-RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccc-ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 0000000 000000001234567899999999999999999999864
No 178
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.4e-33 Score=313.90 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=198.9
Q ss_pred HhhCCceeeecCCccEEEEEeC-----CCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSN-----NSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~-----~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
++...++||+|+||.||++... .++..||+|..+.. ...+.+|++.++.++|+||+++++++.+.+..++|
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV 85 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence 4455688999999999999743 34668999988643 34688899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCC------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceE
Q 001226 906 TEYMPGGTLFNVLHQNEPR------------LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPK 973 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vk 973 (1119)
|||+++++|.++++...+. ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCEE
Confidence 9999999999999865421 2478899999999999999999998 999999999999999999999
Q ss_pred EEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhh
Q 001226 974 IGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWK 1052 (1119)
Q Consensus 974 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1052 (1119)
++|||++................+++.|+|||...+..++.++|||||||++|||++ |+.||......+ .. ...
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~---~~~ 237 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AI---ECI 237 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HH---HHH
Confidence 999999876543222222233345788999999988899999999999999999998 898885431110 00 000
Q ss_pred hcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1053 LQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
.... .. ..+...+..+.+++.+||+.||++||+++||.+.|++
T Consensus 238 ----------~~~~-~~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 238 ----------TQGR-EL--ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ----------HcCc-cC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 0000 00 0011223467899999999999999999999999874
No 179
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.3e-34 Score=326.20 Aligned_cols=235 Identities=24% Similarity=0.370 Sum_probs=189.3
Q ss_pred ceeeecCCccEEEEEe---CCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 840 RIIGKGKHGTVYRTLS---NNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~---~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+.||+|+||.||++++ ..+++.||+|+++.. ...+..|++++++++||||+++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999876 356899999998642 2345679999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+|+|.+++.... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~ 153 (318)
T cd05582 82 GGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--K 153 (318)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--C
Confidence 999999997654 489999999999999999999999 99999999999999999999999999987654321 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
......|++.|+|||.+.+..++.++||||+||++|||++|+.||...... ....... .....
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~~~~i~----------~~~~~-- 216 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ETMTMIL----------KAKLG-- 216 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HHHHHHH----------cCCCC--
Confidence 223456899999999998888999999999999999999999998643110 0000000 00000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMRE 1101 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 1101 (1119)
.+...+..+.+++.+||+.||++||++.+
T Consensus 217 --~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 --MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 01122346789999999999999999544
No 180
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.3e-34 Score=324.94 Aligned_cols=237 Identities=25% Similarity=0.343 Sum_probs=187.5
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHH-HHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEI-RTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||+||+|++..+++.||+|++.... ..+..|. .+++.++||||+++++++.+++..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999985321 1233333 346778999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.||++|+.|||+. ||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--~~~ 152 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGT 152 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC--CCC
Confidence 99999997654 377888889999999999999999 9999999999999999999999999998754321 122
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...... .......
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~i----------~~~~~~~-- 215 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EMYDNI----------LNKPLQL-- 215 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-----HHHHHH----------HhCCcCC--
Confidence 33457899999999999999999999999999999999999999642110 000000 0011110
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMREVV 1103 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell 1103 (1119)
....+..+.+++.+|++.+|.+||++++.+
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 216 --KPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred --CCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 112244678999999999999999987433
No 181
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.2e-33 Score=312.50 Aligned_cols=258 Identities=25% Similarity=0.325 Sum_probs=204.0
Q ss_pred HHhhCCceeeecCCccEEEEEeCC----CceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeec-CCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN----SRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTK-DEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~ 903 (1119)
.+|+..+.||+|+||.||+|.+.. ++..||+|+++.. ...+.+|+.++++++||||+++++++.. +...+
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 85 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF 85 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence 456777899999999999999876 3578999988643 2346789999999999999999998766 46789
Q ss_pred EEEeccCCCCHHHhhccCCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPR-----LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
+++||+++++|.+++...... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCC
Confidence 999999999999999765322 4589999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccc
Q 001226 979 MSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENH 1057 (1119)
Q Consensus 979 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1119)
+++.+.............++..|+|||++.+..++.++||||+||++||+++ |+.||..... . .+...... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~---~~~~~~~~-~~ 236 (280)
T cd05043 163 LSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--F---EMAAYLKD-GY 236 (280)
T ss_pred CcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--H---HHHHHHHc-CC
Confidence 9986644322222223346778999999988889999999999999999998 9999864311 1 11111100 00
Q ss_pred cccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1058 ECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
... .....+..+.+++.+||+.+|++|||+.++++.|+.+.++
T Consensus 237 --------~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 237 --------RLA----QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred --------CCC----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 000 0111234678999999999999999999999999988754
No 182
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.4e-34 Score=325.84 Aligned_cols=235 Identities=26% Similarity=0.352 Sum_probs=187.0
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHH-HHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIR-TLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||+||+|.+..+++.||+|++... ...+..|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999999999999999998532 123344444 46778999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~ 152 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDT 152 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCC
Confidence 99999887654 488999999999999999999999 9999999999999999999999999998753221 122
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ..... .........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~----------~~~~~~~~~- 216 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMYDN----------ILHKPLVLR- 216 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHHHH----------HHcCCccCC-
Confidence 23457899999999999999999999999999999999999998643110 00000 001111110
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMRE 1101 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 1101 (1119)
...+..+.+++.+|++.+|++||++++
T Consensus 217 ---~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 217 ---PGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred ---CCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 112346779999999999999998863
No 183
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.8e-33 Score=309.55 Aligned_cols=252 Identities=28% Similarity=0.447 Sum_probs=199.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCce---EEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRK---HWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~---~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+|+..+.||+|+||.||+|....++. .||+|..+.. ...+..|+++++.++|||++++.+++.+.+..++||
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT 85 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence 45667899999999999999876544 7999988643 235778999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++++|.+++..... .+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+|++|||++......
T Consensus 86 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 86 EYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999976532 488999999999999999999999 9999999999999999999999999998766432
Q ss_pred CCCC-cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 987 HSSS-TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 987 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
.... .......+..|+|||++....++.++||||+||++||+++ |+.||...... . ...... .
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~---~~~~i~-~--------- 225 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--E---VMKAIN-D--------- 225 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--H---HHHHHh-c---------
Confidence 2111 1112233567999999988889999999999999999997 99998643111 0 111000 0
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
.... ......+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 226 -~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 -GFRL--PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -CCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000 00112345678999999999999999999999999876
No 184
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.7e-34 Score=324.19 Aligned_cols=234 Identities=25% Similarity=0.362 Sum_probs=185.8
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHH-HHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIR-TLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
++||+|+||.||+|++..+++.||+|++.+.. ..+..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999985321 22334443 57788999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|..++.... .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (321)
T cd05603 81 GELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EET 152 (321)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCc
Confidence 99998887643 478889999999999999999998 9999999999999999999999999998753221 122
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||.... ........ .......
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i----------~~~~~~~-- 215 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNI----------LHKPLQL-- 215 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHH----------hcCCCCC--
Confidence 334578999999999988889999999999999999999999996431 10110100 0111110
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMR 1100 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 1100 (1119)
+......+.+++.+|++.+|.+||++.
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 --PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred --CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 111234678999999999999999764
No 185
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.9e-33 Score=313.92 Aligned_cols=260 Identities=27% Similarity=0.407 Sum_probs=198.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCC--------------ceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeee
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNS--------------RKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGS 895 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~--------------~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~ 895 (1119)
+|...+.||+|+||.||++.+... ...||+|+++.. ...+.+|++++++++|||+++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 566778899999999999887542 235899988643 2357789999999999999999999
Q ss_pred eecCCceEEEEeccCCCCHHHhhccCCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEe
Q 001226 896 CTKDEHGFIVTEYMPGGTLFNVLHQNEP---------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILL 966 (1119)
Q Consensus 896 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill 966 (1119)
+..+...++||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nill 162 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCLV 162 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEEE
Confidence 9999999999999999999999865421 12368889999999999999999999 99999999999999
Q ss_pred CCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh--CCCCCCCCCCCCCc
Q 001226 967 DSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF--RKMPVDPSFGEDTD 1044 (1119)
Q Consensus 967 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt--g~~p~~~~~~~~~~ 1044 (1119)
+.++.+|++|||++................++..|+|||....+.++.++|||||||++|||++ |..||...... .
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~--~ 240 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE--Q 240 (295)
T ss_pred cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH--H
Confidence 9999999999999976543322222333455779999999988889999999999999999998 56676542111 1
Q ss_pred eeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1045 IVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
............ .... ........+..+.+++.+|++.+|++||++++|++.|++
T Consensus 241 ~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 241 VIENTGEFFRNQ-------GRQI--YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHhhhhc-------cccc--cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 000000000000 0000 000011124578999999999999999999999999864
No 186
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-33 Score=328.63 Aligned_cols=263 Identities=20% Similarity=0.253 Sum_probs=199.2
Q ss_pred HhhCCceeeecCCccEEEEEeCC--CceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNN--SRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+|...+.||+|+||.||++...+ .++.||+|.+... ....+|+++++.++||||+++++++..+...++|||++. +
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 170 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-C 170 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-C
Confidence 57777999999999999997643 4678999988654 356789999999999999999999999999999999995 6
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
+|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||+++...........
T Consensus 171 ~l~~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~ 244 (392)
T PHA03207 171 DLFTYVDRSG---PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQC 244 (392)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcccccccc
Confidence 8888885433 489999999999999999999999 9999999999999999999999999999866543333333
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCc--eeehhhhhhccccccc--------cc
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTD--IVTWTRWKLQENHECI--------CF 1062 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~ 1062 (1119)
....||+.|+|||++.+..++.++||||+||++|||++|+.||......... +....+.......... ..
T Consensus 245 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 324 (392)
T PHA03207 245 YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKH 324 (392)
T ss_pred cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHH
Confidence 4567999999999999889999999999999999999999999754322110 0000000000000000 00
Q ss_pred ---ccccccCCCch-----HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 ---LDREISFWDSD-----DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ---~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
+....+..... ......++.+++.+|++.||++|||+.|++.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 325 FKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000000 01123467789999999999999999999987
No 187
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.5e-34 Score=315.16 Aligned_cols=250 Identities=34% Similarity=0.498 Sum_probs=198.4
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccccc------cHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSET------NFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+.++.||+|+||+||++.+..+++.||+|++..... ...+|+..++.++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 4556899999999999999999999999999965432 1234899999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++.... .+++..+..++.|+++|+++||+. +++|+||||+||++++++.++++|||.+.... ...
T Consensus 81 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENN 152 (260)
T ss_dssp TTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST--STT
T ss_pred ccccccccccccc---cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc--ccc
Confidence 9999999998433 489999999999999999999999 99999999999999999999999999987642 122
Q ss_pred CcccccccCCCcccccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAY-STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.......++..|+|||... +..++.++||||+|+++|+|++|..||...... ...... .....+...
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-~~~~~~-----------~~~~~~~~~ 220 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-DQLEII-----------EKILKRPLP 220 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-HHHHHH-----------HHHHHTHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccch-hhhhhh-----------hhccccccc
Confidence 3344567899999999988 788999999999999999999999998753000 000000 000000000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
............+.+++.+|++.||++||++++++++
T Consensus 221 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 221 SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000001112678999999999999999999999864
No 188
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-33 Score=315.82 Aligned_cols=247 Identities=26% Similarity=0.377 Sum_probs=199.8
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
.+|+..+.||+|+||.||+|.+..+++.||+|.+... ...+.+|+.+++.++||||+++++.+..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 3667778999999999999999888999999988532 245778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.++++.. .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++++|||.+.......
T Consensus 100 ~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-- 170 (296)
T cd06654 100 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (296)
T ss_pred CCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccc--
Confidence 999999998653 378889999999999999999999 99999999999999999999999999987654322
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
.......+++.|+|||...+..++.++|||||||++|||++|+.||........ +..... .. .+..
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~----~~~~~~-~~-------~~~~-- 236 (296)
T cd06654 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----LYLIAT-NG-------TPEL-- 236 (296)
T ss_pred cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh----HHHHhc-CC-------CCCC--
Confidence 112234688999999999888889999999999999999999999964321110 000000 00 0000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+......+.+++.+||+.+|++||+++|++++
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 --QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0112234567899999999999999999999985
No 189
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-33 Score=319.61 Aligned_cols=260 Identities=25% Similarity=0.398 Sum_probs=203.8
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-------CceEEEEEecccc-----cccHHHHHHHHhhc-CCCCEEEEeeeeecCC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-------SRKHWAVKKLNRS-----ETNFDVEIRTLSLV-RHRNILRIVGSCTKDE 900 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~-----~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 900 (1119)
.+|+.++.||+|+||.||+|.+.. .+..||+|..+.. ..++.+|+.+++++ +||||+++++++.+++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 367888999999999999998643 2346899988642 23577899999999 7999999999999999
Q ss_pred ceEEEEeccCCCCHHHhhccCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNE-------------PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD 967 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 967 (1119)
..++||||+++|+|.+++.... +...+++.++..++.|++.|++|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 9999999999999999997642 123578899999999999999999998 999999999999999
Q ss_pred CCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCcee
Q 001226 968 SELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIV 1046 (1119)
Q Consensus 968 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~ 1046 (1119)
.++.+||+|||+++...............++..|+|||...+..++.++||||+|+++|||++ |..||..... .
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~ 243 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-----E 243 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-----H
Confidence 999999999999986644322222222334568999999998899999999999999999998 8888754211 1
Q ss_pred ehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1047 TWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
.+..... .. ... ..+...+..+.+++.+|++.+|++||++.|+++.|+++.....
T Consensus 244 ~~~~~~~-~~----------~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 244 ELFKLLK-EG----------HRM--DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred HHHHHHH-cC----------CCC--CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 1111000 00 000 0011223467899999999999999999999999999985543
No 190
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.1e-33 Score=315.23 Aligned_cols=257 Identities=25% Similarity=0.400 Sum_probs=200.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCce--EEEEEecccc-----cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRK--HWAVKKLNRS-----ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~--~vavK~~~~~-----~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+|+..+.||+|+||.||+|..+.++. .+++|.++.. ...+.+|+.+++++ +||||+++++++.+.+..++||
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 82 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence 45667889999999999999877654 4788887632 23577899999999 7999999999999999999999
Q ss_pred eccCCCCHHHhhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceE
Q 001226 907 EYMPGGTLFNVLHQNEP-------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPK 973 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vk 973 (1119)
||+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEE
Confidence 99999999999976431 12488899999999999999999998 999999999999999999999
Q ss_pred EEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhh
Q 001226 974 IGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWK 1052 (1119)
Q Consensus 974 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1052 (1119)
++|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||....... . +...
T Consensus 160 l~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--~--~~~~- 231 (297)
T cd05089 160 IADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--L--YEKL- 231 (297)
T ss_pred ECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--H--HHHH-
Confidence 9999998643211 11111233567999999988889999999999999999997 999986432110 0 0000
Q ss_pred hcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCCC
Q 001226 1053 LQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNEG 1115 (1119)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 1115 (1119)
.+.... ..+...+..+.+++.+||+.+|.+||+++++++.|+++.++...
T Consensus 232 -----------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 232 -----------PQGYRM--EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred -----------hcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 000000 00112234678999999999999999999999999998876643
No 191
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.5e-33 Score=309.71 Aligned_cols=246 Identities=25% Similarity=0.403 Sum_probs=195.2
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|...++||+|+||.||+|.+..+++.||+|++... ...+.+|+.++++++||||+++++++..++..++||||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 34557899999999999999999999999988533 2347789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
++++..+. .+++..+..++.|++.|+.|||+. +|+|+||||+||+++.++.++++|||++......
T Consensus 83 ~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 83 GGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred CCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 99996542 367888899999999999999999 9999999999999999999999999998765432
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
......++..|+|||++.+..++.++||||+||++|||++|+.||................. ...++.....
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 220 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQ--------CIVDEDPPVL 220 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHH--------HHhccCCCCC
Confidence 22335689999999999988899999999999999999999999975432222111100000 0000000000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.....+.++.+++.+|++.+|++||+++|++++
T Consensus 221 --~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 --PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred --CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011123467899999999999999999999886
No 192
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.9e-33 Score=313.07 Aligned_cols=260 Identities=28% Similarity=0.441 Sum_probs=198.5
Q ss_pred HhhCCceeeecCCccEEEEEeCC----------------CceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNN----------------SRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIV 893 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~----------------~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~ 893 (1119)
+|+..++||+|+||.||++.+.. ++..||+|+++... .++.+|+.+++.++|+||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 56778899999999999986432 34568999986432 3578899999999999999999
Q ss_pred eeeecCCceEEEEeccCCCCHHHhhccCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeE
Q 001226 894 GSCTKDEHGFIVTEYMPGGTLFNVLHQNEP--------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNIL 965 (1119)
Q Consensus 894 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 965 (1119)
+++..++..++||||+++++|.+++..... ...+++.++..++.|++.|++|||+. +++||||||+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Nil 162 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNCL 162 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheEE
Confidence 999999999999999999999999976432 12477889999999999999999999 9999999999999
Q ss_pred eCCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh--CCCCCCCCCCCCC
Q 001226 966 LDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF--RKMPVDPSFGEDT 1043 (1119)
Q Consensus 966 l~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt--g~~p~~~~~~~~~ 1043 (1119)
++.++.++++|||+++...............++..|+|||....+.++.++||||+||++|||++ |..||......
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~-- 240 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE-- 240 (296)
T ss_pred EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH--
Confidence 99999999999999986543322222223345678999998888889999999999999999998 67787543111
Q ss_pred ceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1044 DIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
............ ...... . ..+...+..+.+++.+||+.||++||++++|.+.|++
T Consensus 241 ~~~~~~~~~~~~-~~~~~~----~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 QVIENTGEFFRD-QGRQVY----L----PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHHhh-cccccc----C----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 110000000000 000000 0 0011223577899999999999999999999999874
No 193
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.5e-33 Score=307.03 Aligned_cols=256 Identities=21% Similarity=0.343 Sum_probs=205.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||+|....+++.||+|.++. ....+.+|++++++++|++++++++++.+++..++|||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 45667889999999999999998899999998742 13457789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 908 YMPGGTLFNVLHQNEP-RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
|+++++|.+++..... ...+++.++..++.++++|++|||+. +++||||+|+||+++.++.++++|||.+......
T Consensus 83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 9999999999875322 33588999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
. .......++..|+|||...+..++.++||||+||++|||++|+.||.... ........... ...
T Consensus 160 ~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~----------~~~ 224 (267)
T cd08224 160 T--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIE----------KCD 224 (267)
T ss_pred C--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhh----------cCC
Confidence 1 11223457889999999988889999999999999999999999986431 11111100000 000
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
.. .......+..+.+++.+||+.+|++||++.+|++.++.+.
T Consensus 225 ~~--~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 YP--PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CC--CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00 0111133457889999999999999999999999999875
No 194
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.5e-33 Score=307.63 Aligned_cols=246 Identities=28% Similarity=0.392 Sum_probs=200.7
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||+|....+++.|++|.+.. ....+.+|+++++.++|||++++++++.+++..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 4456789999999999999999999999998742 2345778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.++++... ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++........
T Consensus 82 ~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 82 ENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 9999999998753 23588999999999999999999998 999999999999999999999999999886654221
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......+++.|+|||+..+..++.++|+||+||++|||++|+.||..... .. ..... ......
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~---~~~~~----------~~~~~~- 219 (256)
T cd08529 157 -FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GA---LILKI----------IRGVFP- 219 (256)
T ss_pred -hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HH---HHHHH----------HcCCCC-
Confidence 12234678899999999988899999999999999999999999864321 00 00000 000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+..+.+++.+||+.+|++||++.+++++
T Consensus 220 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 --PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 0111334578999999999999999999999875
No 195
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4e-33 Score=308.09 Aligned_cols=253 Identities=28% Similarity=0.413 Sum_probs=200.4
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCc---eEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSR---KHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~---~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
.+|...+.||+|+||.||+|.+..++ ..||+|.++.. ...+.+|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 45677899999999999999876433 47999988643 23578899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.....
T Consensus 84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999986543 478999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCC-cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 986 SHSSS-TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 986 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
..... ......++..|+|||++.+..++.++|+||+|+++||+++ |+.||...... +.. .... ...
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~---~~~~-~~~------ 226 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVI---KAIE-EGY------ 226 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHH---HHHh-CCC------
Confidence 22111 1122234568999999988889999999999999999886 99998643211 110 0000 000
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
... .....+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 227 --~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 --RLP----APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --cCC----CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000 0112244678999999999999999999999999875
No 196
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.3e-33 Score=309.17 Aligned_cols=253 Identities=28% Similarity=0.426 Sum_probs=199.7
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCce---EEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRK---HWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~---~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
..|...+.||+|+||.||+|..+.+++ .||||.++.. ..++..|+..++.++||||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 345667899999999999999876554 6999998643 23577899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.....
T Consensus 84 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 84 TEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999999986543 488999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCCcccc-c--ccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 986 SHSSSTRSA-I--VGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 986 ~~~~~~~~~-~--~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
......... . ..+..|+|||.+.+..++.++||||+||++||+++ |..||...... .. ..... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~---~~~i~-~~~---- 228 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DV---INAIE-QDY---- 228 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HH---HHHHH-cCC----
Confidence 222111111 1 12457999999988899999999999999999886 99998643111 11 11100 000
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
... .....+..+.+++.+||+.+|++||+++++++.|+++
T Consensus 229 ----~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 ----RLP----PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ----cCC----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 0112244678999999999999999999999999875
No 197
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.2e-34 Score=329.97 Aligned_cols=260 Identities=23% Similarity=0.274 Sum_probs=194.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC-----ceEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE-----HGFI 904 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~l 904 (1119)
++..++||+|+||.||+|.+..+++.||||++... ...+.+|+.+++.++||||+++++++.... ..|+
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 45568899999999999999988999999988532 234678999999999999999999998766 7899
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||++ ++|.+++.... .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 82 v~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 82 VTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred Eeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 999996 67888776543 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccc-------
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQEN------- 1056 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------- 1056 (1119)
... ........+++.|+|||.+.+. .++.++||||+||++|||++|+.||........ ...........
T Consensus 155 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 155 PDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ--LDLITDLLGTPSLEAMRS 231 (372)
T ss_pred cCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHcCCCCHHHHHH
Confidence 322 1222344678999999988764 578999999999999999999999965321100 00000000000
Q ss_pred --ccccccc-cccccCC-----CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1057 --HECICFL-DREISFW-----DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1057 --~~~~~~~-~~~~~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+ ....... ..........+.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000 0000000 00001124567899999999999999999999986
No 198
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.9e-33 Score=308.26 Aligned_cols=246 Identities=30% Similarity=0.436 Sum_probs=198.4
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------------ccHHHHHHHHhhcCCCCEEEEeeeeecCCce
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 902 (1119)
|+.++.||+|+||.||+|.+..+++.||+|.+.... ..+.+|+.++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 566789999999999999998889999999874321 3467899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||.++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999997754 378889999999999999999998 999999999999999999999999999887
Q ss_pred ccCCCCC----CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccc
Q 001226 983 ISDSHSS----STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHE 1058 (1119)
Q Consensus 983 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1119)
....... .......++..|+|||...+..++.++|+||+||++|||++|+.||....... ... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~--~~----- 224 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ----AIF--KI----- 224 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH----HHH--HH-----
Confidence 6532111 11123457889999999988889999999999999999999999996431100 000 00
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.....+.. +...+..+.+++.+||+.+|++||++.|++++
T Consensus 225 -~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 225 -GENASPEI------PSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred -hccCCCcC------CcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 00001111 11234567899999999999999999999874
No 199
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.3e-33 Score=311.46 Aligned_cols=248 Identities=24% Similarity=0.299 Sum_probs=197.6
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..+.||+|+||.||++.+..+++.||+|.+... ...+.+|+.+++.++|++++++++.+.+++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 34557899999999999999999999999987532 12356799999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++++|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred cCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999999865442 3488999999999999999999998 99999999999999999999999999987553321
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......|+..|+|||.+.+..++.++||||+||++|||++|+.||........ +..... .........
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~----~~~~~~-----~~~~~~~~~- 224 (285)
T cd05630 157 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVER-----LVKEVQEEY- 224 (285)
T ss_pred --cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch----HHHHHh-----hhhhhhhhc-
Confidence 12234689999999999988999999999999999999999999975321100 000000 000000000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPS-----MREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ell~~ 1105 (1119)
.......+.+++.+||+.||++||| ++|+++|
T Consensus 225 -----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 225 -----SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred -----CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 0112345789999999999999999 8899874
No 200
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.4e-33 Score=304.92 Aligned_cols=245 Identities=23% Similarity=0.375 Sum_probs=192.1
Q ss_pred eeeecCCccEEEEEeC--CCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCC
Q 001226 841 IIGKGKHGTVYRTLSN--NSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGT 913 (1119)
Q Consensus 841 ~lG~G~fg~Vy~~~~~--~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 913 (1119)
.||+|+||.||+|.++ ..+..||+|+..... ..+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999765 445679999885432 34778999999999999999999885 457799999999999
Q ss_pred HHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC-cc
Q 001226 914 LFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS-TR 992 (1119)
Q Consensus 914 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~-~~ 992 (1119)
|.+++..... .+++..+.+++.|++.|++|||++ +++||||||+||+++.++.+|++|||++.......... ..
T Consensus 81 L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 81 LNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 9999875432 489999999999999999999998 99999999999999999999999999997654322211 12
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
....++..|+|||......++.++|||||||++||+++ |+.||...... .. .... .... +.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~---~~~~-~~~~----------~~-- 217 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EV---MSFI-EQGK----------RL-- 217 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HH---HHHH-HCCC----------CC--
Confidence 22234678999999888889999999999999999996 99998643211 00 0000 0000 00
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
..+...+.++.+++.+||+.+|++||++.+|.+.|+++
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 00112245778999999999999999999999999875
No 201
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.1e-33 Score=312.63 Aligned_cols=254 Identities=26% Similarity=0.409 Sum_probs=199.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-----CceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
.+|+..+.||+|+||.||+|.+.. ++..||+|++... ..++.+|+.++++++||||+++++++.++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 356667889999999999998743 5788999988643 245778999999999999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 001226 904 IVTEYMPGGTLFNVLHQNEP-------------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNI 964 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~-------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 964 (1119)
+||||+++++|.+++..... ...+++..+..++.|++.|++|+|+. +++||||||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ni 161 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNC 161 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhhe
Confidence 99999999999999975321 12477888999999999999999998 999999999999
Q ss_pred EeCCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCC
Q 001226 965 LLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDT 1043 (1119)
Q Consensus 965 ll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~ 1043 (1119)
+++.++.++++|||.+.................+..|+|||...+..++.++|||||||++|||++ |..||......
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-- 239 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-- 239 (288)
T ss_pred EecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999999876543222222223345678999999888899999999999999999997 88887543111
Q ss_pred ceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1044 DIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
...... .+..... .+...+..+.+++.+|++.+|++|||++|+++.|++
T Consensus 240 ---~~~~~~----------~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 ---EVIYYV----------RDGNVLS---CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ---HHHHHH----------hcCCCCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 011100 0000000 011224578899999999999999999999999875
No 202
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.8e-33 Score=312.97 Aligned_cols=247 Identities=27% Similarity=0.373 Sum_probs=200.5
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
.+|+..+.||+|+||.||+|.+..+++.||+|.+... ...+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 5778889999999999999999888999999988532 234678999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++... .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++++|||.+........
T Consensus 99 ~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~- 170 (297)
T cd06656 99 AGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (297)
T ss_pred CCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc-
Confidence 999999998653 378889999999999999999998 999999999999999999999999999876543221
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......+++.|+|||...+..++.++|+||+||++|++++|+.||............. ... .+..
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~-~~~-----------~~~~-- 235 (297)
T cd06656 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNG-----------TPEL-- 235 (297)
T ss_pred -CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeec-cCC-----------CCCC--
Confidence 1233468889999999988889999999999999999999999996432111111000 000 0000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+...+..+.+++.+||+.+|++||++++++++
T Consensus 236 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 236 --QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred --CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112234457899999999999999999999984
No 203
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.5e-33 Score=319.86 Aligned_cols=242 Identities=26% Similarity=0.351 Sum_probs=191.9
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEec
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+..+.||+|+||+||+|.++.+++.||+|++++. ...+..|+.+++.+. |++|+++.+++.+++..|+||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey 82 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY 82 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence 4457899999999999999999999999988542 123566888888775 67788899999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 83 VNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 99999999987654 488999999999999999999999 99999999999999999999999999987543211
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ... .......
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~---~~~----------i~~~~~~ 219 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--EL---FQS----------IMEHNVS 219 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HH---HHH----------HHhCCCC
Confidence 1223456899999999998888999999999999999999999999643110 00 000 0011110
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSM-----REVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ell~~ 1105 (1119)
.+...+.++.+++.+|++.+|.+|++. +++.++
T Consensus 220 ----~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 220 ----YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred ----CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 011123467899999999999999974 555554
No 204
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-33 Score=322.58 Aligned_cols=190 Identities=24% Similarity=0.357 Sum_probs=165.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
.|+..+.||+|+||.||+|.+..+++.||+|+.... ....|+.++++++||||+++++++.++...++|||++. ++|
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 143 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDL 143 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcH
Confidence 477779999999999999999998999999986433 34679999999999999999999999999999999994 688
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++..... .+++..+..++.||+.|+.|||+. +|+||||||+||+++.++.+||+|||.++..... .....
T Consensus 144 ~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~ 215 (357)
T PHA03209 144 YTYLTKRSR--PLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---PAFLG 215 (357)
T ss_pred HHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC---ccccc
Confidence 888876432 489999999999999999999999 9999999999999999999999999998754321 12233
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCC
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPV 1035 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~ 1035 (1119)
..||+.|+|||++.+..++.++||||+||++|||+++..|+
T Consensus 216 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 216 LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 56899999999999999999999999999999999865554
No 205
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.9e-33 Score=310.34 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=198.6
Q ss_pred hhCCceeeecCCccEEEEEe----CCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecC--CceEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLS----NNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGFI 904 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~----~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 904 (1119)
|+..+.||+|+||.||++.. ..+++.||+|.++.. ...+.+|+.+++.++|||++++++++.+. ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 45568899999999999974 456788999998532 24578899999999999999999998775 56799
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||+++++|.+++..... .+++..+..++.|++.|++|+|+. +++||||||+||+++.++.++++|||+++...
T Consensus 86 v~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 86 IMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccc
Confidence 9999999999999976532 489999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCC-CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 985 DSHSS-STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 985 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
..... .......++..|+|||+..+..++.++||||+||++|||++++.|.................... .......+
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMT-VTRLVRVL 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhccccccccc-HHHHHHHH
Confidence 32211 11223456778999999888889999999999999999999887653321100000000000000 00000000
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
..... .......+..+.+++.+|++.+|++||+++++++.++++
T Consensus 240 ~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKR--LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCcc--CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00000 001112345789999999999999999999999999875
No 206
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2e-33 Score=313.70 Aligned_cols=263 Identities=21% Similarity=0.239 Sum_probs=197.0
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||+|.+..+++.||+|+++.. ...+.+|+.+++.++||||+++++++.++...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 55668899999999999999988999999988532 235778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
+ ++|.+++........+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||++.......
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-- 155 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc--
Confidence 7 68988887655444689999999999999999999999 99999999999999999999999999987554321
Q ss_pred CcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhc------cccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQ------ENHECICF 1062 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 1062 (1119)
.......+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+........+... .......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD- 234 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH-
Confidence 122234568899999987654 57889999999999999999999986432111000000000000 0000000
Q ss_pred ccccccCCCc-----hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWDS-----DDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.......+.. .....+.++.+++.+||+.||++|||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000000 001124567899999999999999999999864
No 207
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.4e-33 Score=314.26 Aligned_cols=259 Identities=25% Similarity=0.353 Sum_probs=199.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|+..+.||+|+||.||++.+..++..||+|.++.. ..++.+|++++++++||||+++++++.+++..++||||++
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~ 82 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD 82 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence 55668899999999999999999999999988543 2347789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.++++..+ .+++..+..++.|+++|+.|||+.+ +++||||||+||+++.++.+|++|||++......
T Consensus 83 ~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 153 (308)
T cd06615 83 GGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 153 (308)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc----
Confidence 999999998754 4889999999999999999999732 8999999999999999999999999998755332
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccc-------------
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENH------------- 1057 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------------- 1057 (1119)
......++..|+|||...+..++.++|+||+|+++|||++|+.||...... ....+.........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCCCC
Confidence 123346889999999988888999999999999999999999998643211 10000000000000
Q ss_pred ------cccccccccccCC--CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1058 ------ECICFLDREISFW--DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1058 ------~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+...... .......+.++.+++.+|++.+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000000 00001134568899999999999999999999998
No 208
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9.7e-33 Score=313.34 Aligned_cols=197 Identities=24% Similarity=0.422 Sum_probs=161.3
Q ss_pred CCceeeecCCccEEEEEeCC--CceEEEEEeccccc--ccHHHHHHHHhhcCCCCEEEEeeeeec--CCceEEEEeccCC
Q 001226 838 EGRIIGKGKHGTVYRTLSNN--SRKHWAVKKLNRSE--TNFDVEIRTLSLVRHRNILRIVGSCTK--DEHGFIVTEYMPG 911 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~ 911 (1119)
++++||+|+||.||+|..+. ++..||+|.++... ..+.+|+.+++.++||||+++++++.. +...++||||++
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 34789999999999999654 56789999886532 357789999999999999999998853 456799999986
Q ss_pred CCHHHhhccCC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEe----CCCCceEEEeccccc
Q 001226 912 GTLFNVLHQNE------PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILL----DSELEPKIGDFGMSK 981 (1119)
Q Consensus 912 gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~vkl~DfGla~ 981 (1119)
+++.+++.... ....+++..+..++.|++.|+.|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 57877775321 123588899999999999999999999 99999999999999 566789999999998
Q ss_pred cccCCCCC-CcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001226 982 LISDSHSS-STRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPS 1038 (1119)
Q Consensus 982 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~ 1038 (1119)
........ .......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 76543211 12234578999999998876 45789999999999999999999999653
No 209
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.8e-33 Score=312.21 Aligned_cols=248 Identities=22% Similarity=0.266 Sum_probs=197.7
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..+.||+|+||+||+|.+..+++.||+|++... ...+.+|+.+++.++|++++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 34557899999999999999999999999988532 12367799999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++++|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999988876442 2589999999999999999999998 99999999999999999999999999987653321
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......|+..|+|||.+.+..++.++|+||+||++|||++|+.||........ ....... .. .....
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~~-~~---------~~~~~ 223 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDRR-VL---------ETEEV 223 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHh-hh---------ccccc
Confidence 12334689999999999888899999999999999999999999964311100 0000000 00 00000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPS-----MREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ell~~ 1105 (1119)
.....+..+.+++.+|++.+|++||+ +++++++
T Consensus 224 ----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 224 ----YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ----cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 01112345689999999999999999 7788876
No 210
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.6e-33 Score=305.04 Aligned_cols=250 Identities=30% Similarity=0.454 Sum_probs=197.7
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+|+..++||+|+||.||+|.... +..||+|.++.. .+.+.+|+.++++++|++++++++++. +...++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 356777899999999999998765 567999988642 356889999999999999999999875 456789999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.++++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||.+........ .
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05070 84 KGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc-c
Confidence 9999999976542 2478999999999999999999999 999999999999999999999999999976543221 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||...+..++.++||||||+++|||++ |+.||...... + ..... ......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~---~~~~~-----------~~~~~~ 222 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--E---VLEQV-----------ERGYRM 222 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--H---HHHHH-----------HcCCCC
Confidence 1122345678999999888889999999999999999999 88888642111 0 00000 000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
..+...+..+.+++.+|++.+|++|||++++.+.|+.
T Consensus 223 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 --PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111234568899999999999999999999999875
No 211
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.5e-33 Score=334.17 Aligned_cols=260 Identities=20% Similarity=0.289 Sum_probs=190.3
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCC------CCEEEEeeeeecC-CceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRH------RNILRIVGSCTKD-EHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h------~niv~l~~~~~~~-~~~~ 903 (1119)
.+|...++||+|+||+||+|.+..+++.||||+++.. ..+...|+.+++.++| .+++++++++..+ +..+
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~ 208 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC 208 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence 3577778999999999999999998999999998542 2345668888777754 4589999988764 5688
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-------------
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL------------- 970 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~------------- 970 (1119)
+|||++ +++|.+++...+ .+++..+..++.||+.||+|||+++ +||||||||+||+++.++
T Consensus 209 iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 209 IVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred EEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCcccccccccccCC
Confidence 999988 788999887654 4899999999999999999999732 999999999999998765
Q ss_pred ---ceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceee
Q 001226 971 ---EPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVT 1047 (1119)
Q Consensus 971 ---~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 1047 (1119)
.+||+|||.+..... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||+..... .....
T Consensus 283 ~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~ 356 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL-EHLHL 356 (467)
T ss_pred CCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHH
Confidence 499999998764322 233467899999999999999999999999999999999999999753211 00000
Q ss_pred hhh--------hhhcc-ccccccccccc--ccC-------------CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 001226 1048 WTR--------WKLQE-NHECICFLDRE--ISF-------------WDSDDQLKALRLLELALECTRQVADMRPSMREVV 1103 (1119)
Q Consensus 1048 ~~~--------~~~~~-~~~~~~~~~~~--~~~-------------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell 1103 (1119)
... |.... ......+++.. +.. ...........+.+++.+||+.||++|||++|++
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 000 00000 00000000000 000 0000111234577999999999999999999999
Q ss_pred HH
Q 001226 1104 GF 1105 (1119)
Q Consensus 1104 ~~ 1105 (1119)
+|
T Consensus 437 ~H 438 (467)
T PTZ00284 437 TH 438 (467)
T ss_pred cC
Confidence 84
No 212
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.6e-33 Score=304.89 Aligned_cols=248 Identities=25% Similarity=0.347 Sum_probs=202.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc--cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS--ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+|+..+.||+|+||.||+|....+++.||+|.++.. .+++.+|+++++.++||||+++++++.++...|+++||++++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~ 83 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAG 83 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCC
Confidence 456668899999999999999988899999998643 457889999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
+|.+++..... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++....... ...
T Consensus 84 ~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--~~~ 156 (256)
T cd06612 84 SVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--AKR 156 (256)
T ss_pred cHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc--ccc
Confidence 99999976442 589999999999999999999999 99999999999999999999999999988664422 122
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
....++..|+|||.+.+..++.++||||+|+++|||++|+.||.......... .. .........
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-~~---------------~~~~~~~~~ 220 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-MI---------------PNKPPPTLS 220 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-hh---------------ccCCCCCCC
Confidence 33457889999999988889999999999999999999999986432111000 00 000000001
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+......+.+++.+|++.+|++|||++|++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 122334578899999999999999999999874
No 213
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.6e-34 Score=327.25 Aligned_cols=248 Identities=23% Similarity=0.372 Sum_probs=193.4
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..+.||+|+||.||+|.++.+++.||+|+++.. ...+.+|+.++..++||+|+++++++.+++..|+||||
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~ 82 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEF 82 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence 45568899999999999999999999999998532 23467799999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++|+|.+++...+ .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 83 LPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred CCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 99999999997654 488999999999999999999999 999999999999999999999999999875432110
Q ss_pred C---------------------------------CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCC
Q 001226 989 S---------------------------------STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPV 1035 (1119)
Q Consensus 989 ~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~ 1035 (1119)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0 0011347999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 001226 1036 DPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPS---MREVVGF 1105 (1119)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ell~~ 1105 (1119)
....... .+... ... ...+.. ......+.++.+++.+|+ .+|++|++ ++|+++|
T Consensus 237 ~~~~~~~----~~~~i--~~~-------~~~~~~--p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 237 CSETPQE----TYRKV--MNW-------KETLVF--PPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCHHH----HHHHH--HcC-------CCceec--CCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 6432110 00000 000 000000 000112345677888876 49999985 6777766
No 214
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.4e-33 Score=308.58 Aligned_cols=256 Identities=23% Similarity=0.389 Sum_probs=202.6
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCce----EEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRK----HWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 904 (1119)
.+|...+.||+|+||.||+|..+.+++ .||+|..+... ..+.+|+..+++++|||++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 456777899999999999999766554 68999886432 357789999999999999999999887 78899
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++...
T Consensus 86 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 9999999999999987543 489999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
............++..|+|||......++.++|+||+|+++||+++ |+.||...... + +..... ...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~---~~~~~~-~~~------ 228 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--E---IPDLLE-KGE------ 228 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--H---HHHHHh-CCC------
Confidence 3322222222334678999999888889999999999999999998 99998643111 1 111000 000
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
.. ..+...+..+.+++.+||..+|++||++.++++.|+++..+.
T Consensus 229 --~~----~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 229 --RL----PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred --CC----CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 00 001112346789999999999999999999999999986654
No 215
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.7e-33 Score=306.39 Aligned_cols=247 Identities=29% Similarity=0.511 Sum_probs=201.4
Q ss_pred ceeeecCCccEEEEEeCCC---ceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNS---RKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||.||+|..... +..||+|.++.. ...+.+|++.++.++|+|++++++++..+...++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 4699999999999999866 889999998643 34677899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCC------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 912 GTLFNVLHQNEP------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 912 gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
++|.+++..... ...+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++++|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999987621 13589999999999999999999998 999999999999999999999999999987765
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
...........++..|+|||......++.++||||+|+++|||++ |+.||..... ... ..... ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~---~~~~~-~~-------- 223 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEV---LEYLR-KG-------- 223 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHH---HHHHH-cC--------
Confidence 432233344567889999999888889999999999999999998 6999865311 110 00000 00
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
... ..+...+.++.+++.+|++.+|++|||++|++++|+
T Consensus 224 ~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 YRL----PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCC----CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000 111222567889999999999999999999999874
No 216
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=9.9e-33 Score=303.61 Aligned_cols=251 Identities=28% Similarity=0.417 Sum_probs=197.8
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc---ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+|...+.||+|+||.||+|.+..+ ..||+|...... ..+.+|++++++++|||++++++++. ++..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 3566778999999999999988764 468999875432 45788999999999999999999875 456789999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.++++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||.+........ .
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05069 84 KGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc-c
Confidence 9999999976542 3478999999999999999999998 999999999999999999999999999976643221 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||...+..++.++||||+|+++|||++ |+.||...... . .+ .... . ....
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~--~~-~~~~-~----------~~~~ 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--E--VL-EQVE-R----------GYRM 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H--HH-HHHH-c----------CCCC
Confidence 1222345678999999988889999999999999999999 89898643111 0 00 0000 0 0000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
..+...+..+.+++.+||+.+|++||+++++++.|+++
T Consensus 223 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 260 (260)
T cd05069 223 --PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY 260 (260)
T ss_pred --CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 00112345788999999999999999999999999863
No 217
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.2e-33 Score=302.84 Aligned_cols=244 Identities=28% Similarity=0.428 Sum_probs=194.2
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
++||+|+||.||+|... ++..||+|.++... ..+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 36999999999999865 47889999885432 3477899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++..... .+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++........ .....
T Consensus 80 ~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~ 153 (250)
T cd05085 80 LSFLRKKKD--ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGL 153 (250)
T ss_pred HHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccc-ccCCC
Confidence 999876542 478999999999999999999998 999999999999999999999999999875543211 11122
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCch
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSD 1073 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1119)
..++..|+|||+..+..++.++||||+|+++||+++ |..||....... . ......... .. .
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~----~~~~~~~~~--------~~----~ 215 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--A----REQVEKGYR--------MS----C 215 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--H----HHHHHcCCC--------CC----C
Confidence 344678999999988889999999999999999998 999986431110 0 000000000 00 0
Q ss_pred HHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1074 DQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1074 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
+...+..+.+++.+|++.+|++||++.|+++.|++
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 250 (250)
T cd05085 216 PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELAA 250 (250)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhcC
Confidence 11124578899999999999999999999998863
No 218
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.8e-33 Score=304.94 Aligned_cols=250 Identities=27% Similarity=0.448 Sum_probs=198.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc---ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
.|...++||+|+||.||+|..+. ++.||+|.+.... .++.+|+.++++++|||++++++++. ++..++||||+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMEN 84 (260)
T ss_pred HceeeeeeccCccceEEeeecCC-CceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCC
Confidence 45667899999999999998765 6789999886433 46888999999999999999999874 4568999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+........ ..
T Consensus 85 ~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~ 159 (260)
T cd05067 85 GSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-TA 159 (260)
T ss_pred CCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-cc
Confidence 999999876542 3588999999999999999999998 999999999999999999999999999876643221 11
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.....++..|+|||+.....++.++||||+|+++||+++ |+.||..... ...... . ......
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~--~------------~~~~~~- 222 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--PEVIQN--L------------ERGYRM- 222 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--HHHHHH--H------------HcCCCC-
Confidence 223345778999999988889999999999999999998 9999864321 111000 0 000000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
......+.++.+++.+|++.+|++||+++++.+.|+.+
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 223 -PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 00011234688999999999999999999999999864
No 219
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.5e-33 Score=315.47 Aligned_cols=265 Identities=20% Similarity=0.226 Sum_probs=198.5
Q ss_pred HHHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 832 DVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 832 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
.+.+|+..+.||+|+||.||+|.++.+++.||+|.++.. ...+.+|+..++.++||||+++++++..++..++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 345678889999999999999999998999999988532 234678999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||++ ++|.+++..... .+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||++......
T Consensus 84 e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 84 EYLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred eccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9997 589988876543 478899999999999999999999 9999999999999999999999999998754332
Q ss_pred CCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhh-hccccccccc--
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWK-LQENHECICF-- 1062 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-- 1062 (1119)
. .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+. ........ ..........
T Consensus 158 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 158 T--KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ-LHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred C--CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCChhhchhhhc
Confidence 1 12223457889999998765 4578899999999999999999999965321100 00000000 0000000000
Q ss_pred ----ccccccCCC-----chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 ----LDREISFWD-----SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ----~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......... ......+..+.+++.+|++.||.+|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000000 0001224467899999999999999999999974
No 220
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.6e-33 Score=306.19 Aligned_cols=246 Identities=26% Similarity=0.367 Sum_probs=198.5
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccc-----ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-----SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|+..+.||+|+||.||++.+..+++.||+|.++. ..+.+.+|+.+++.++||||+++++.+.+++..|+||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 4566899999999999999999999999998743 22457789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
++++.+++..... ..+++..+..++.|++.|+.|||+. +++|+||||+||++++++.++++|||.+....... .
T Consensus 82 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--~ 155 (255)
T cd08219 82 GGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--A 155 (255)
T ss_pred CCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc--c
Confidence 9999998875432 2478899999999999999999998 99999999999999999999999999987654322 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
......+++.|+|||+..+..++.++|+||+|+++|+|++|+.||..... ..... .... ....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~-~~~~---------~~~~-- 218 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLIL-KVCQ---------GSYK-- 218 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHH-HHhc---------CCCC--
Confidence 22335688899999999888899999999999999999999999864211 00000 0000 0000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+...+..+.+++.+||+.+|++||++++++..
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 -PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0011223467899999999999999999999864
No 221
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.8e-33 Score=324.17 Aligned_cols=262 Identities=24% Similarity=0.283 Sum_probs=195.5
Q ss_pred HHHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC------
Q 001226 832 DVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD------ 899 (1119)
Q Consensus 832 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 899 (1119)
-+.+|+..+.||+|+||.||+|.+..+++.||||++... ...+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 346788889999999999999999989999999988642 13456799999999999999999988643
Q ss_pred CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccc
Q 001226 900 EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGM 979 (1119)
Q Consensus 900 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGl 979 (1119)
...|+||||+++ ++.+++.. .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcc
Confidence 346999999965 66666643 378889999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce----------eeh-
Q 001226 980 SKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI----------VTW- 1048 (1119)
Q Consensus 980 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~----------~~~- 1048 (1119)
++..... .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||......+... ..+
T Consensus 166 ~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 166 ARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred cccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9865432 22234578999999999988899999999999999999999999996432110000 000
Q ss_pred h------hhhhccccccc-----ccc-cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1049 T------RWKLQENHECI-----CFL-DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1049 ~------~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ........... ... +.............+..+.+++.+|++.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0 00000000000 000 000000001111234567899999999999999999999997
No 222
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.6e-33 Score=308.54 Aligned_cols=247 Identities=23% Similarity=0.352 Sum_probs=194.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhc-CCCCEEEEeeeeecC------CceEEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLV-RHRNILRIVGSCTKD------EHGFIV 905 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~~~~lV 905 (1119)
|+..+.||+|+||.||+|....+++.||+|++... ...+..|+.+++++ +||||+++++++... ...|+|
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 87 (272)
T cd06637 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 87 (272)
T ss_pred hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence 45557899999999999999999999999998543 34578899999988 699999999998653 357899
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+|||+||+||++++++.++++|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 88 MEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 163 (272)
T ss_pred EEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceeccc
Confidence 999999999999986442 3588999999999999999999999 999999999999999999999999999876533
Q ss_pred CCCCCcccccccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECI 1060 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1119)
.. .......|+..|+|||++. +..++.++||||+||++|||++|+.||....... ... .... .
T Consensus 164 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~--~~~~-~--- 231 (272)
T cd06637 164 TV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALF--LIPR-N--- 231 (272)
T ss_pred cc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHH--HHhc-C---
Confidence 21 2233456889999999875 3457889999999999999999999986431110 000 0000 0
Q ss_pred ccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 CFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+... ....+..+.+++.+||+.+|++|||+++++++
T Consensus 232 --~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 --PAPRLK-----SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred --CCCCCC-----CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 000000 01123467899999999999999999999874
No 223
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7.3e-33 Score=306.45 Aligned_cols=247 Identities=26% Similarity=0.424 Sum_probs=193.3
Q ss_pred ceeeecCCccEEEEEeCCCce--EEEEEecccc-----cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRK--HWAVKKLNRS-----ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~--~vavK~~~~~-----~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||.||+|....++. .+|+|.++.. ...+.+|+.+++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999887665 4688887632 23577899999999 799999999999999999999999999
Q ss_pred CCHHHhhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 912 GTLFNVLHQNEP-------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 912 gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
|+|.++++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999976431 12478999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccc
Q 001226 979 MSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENH 1057 (1119)
Q Consensus 979 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1119)
++..... .........+..|+|||+.....++.++|||||||++|||++ |..||...... .. + .. .....
T Consensus 158 l~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~--~-~~-~~~~~ 228 (270)
T cd05047 158 LSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--EL--Y-EK-LPQGY 228 (270)
T ss_pred Cccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--HH--H-HH-HhCCC
Confidence 9863221 111112234567999999988889999999999999999997 99998643111 00 0 00 00000
Q ss_pred cccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1058 ECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
... .....+..+.+++.+|++.+|.+|||++++++.|+++.
T Consensus 229 --------~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 --------RLE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred --------CCC----CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 00112346789999999999999999999999998864
No 224
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=9.6e-33 Score=303.01 Aligned_cols=247 Identities=25% Similarity=0.433 Sum_probs=200.2
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc---ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+|+..+.||+|+||.||+|... ++.||+|+++... .++.+|+.+++.++|+||+++++++.++...++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 35566789999999999999875 6889999997554 367889999999999999999999998899999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++++|||.++.......
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 84 KGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9999999986542 2589999999999999999999999 999999999999999999999999999986633211
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
....+..|+|||+...+.++.++||||+|+++||+++ |+.||...... +... .. ......
T Consensus 158 ---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~---~~-----------~~~~~~ 218 (256)
T cd05039 158 ---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVP---HV-----------EKGYRM 218 (256)
T ss_pred ---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH---HH-----------hcCCCC
Confidence 2234668999999988889999999999999999997 99998643111 1000 00 000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
..+...+..+.+++.+|++.+|++||+++|++++|+++
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 --EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00112245788999999999999999999999999764
No 225
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.7e-33 Score=304.22 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=197.2
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc--ccHHHHHHHHhhcCCCCEEEEeeeee-cCCceEEEEecc
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE--TNFDVEIRTLSLVRHRNILRIVGSCT-KDEHGFIVTEYM 909 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e~~ 909 (1119)
..+|+..+.||+|+||.||++... +..||+|..+... ..+.+|+.++++++|+|++++++++. +++..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 456777899999999999999765 6789999886433 35788999999999999999999764 456789999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.++++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++.......
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 83 AKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999999986543 3488999999999999999999998 99999999999999999999999999987543321
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
....++..|+|||+..+..++.++||||+||++|||++ |+.||.... ......... ... ...
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~~~-~~~------~~~-- 219 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVE-KGY------KMD-- 219 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHh-cCC------CCC--
Confidence 12234668999999988889999999999999999997 999985321 111111000 000 000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
.....+..+.+++.+|++.+|++|||++++++.|+++
T Consensus 220 ----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 220 ----APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0112245678999999999999999999999999864
No 226
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=317.59 Aligned_cols=266 Identities=23% Similarity=0.297 Sum_probs=209.5
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccc-----ccccHHHHHHHHhhcCCCCEEEEeeeeecCC------ceEEEEe
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-----SETNFDVEIRTLSLVRHRNILRIVGSCTKDE------HGFIVTE 907 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~lV~e 907 (1119)
.+.||+||||.||+|+++.+|+.||||.++. ..+...+|++++++++|||||+++++-.+.. ...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 3679999999999999999999999999854 4456788999999999999999999866543 4589999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC--CCCc--eEEEeccccccc
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD--SELE--PKIGDFGMSKLI 983 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~~--vkl~DfGla~~~ 983 (1119)
||.||||..++.+......+++.+...+..+++.|+.|||++ +||||||||.||++- ++|+ -|++|||.|+..
T Consensus 98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 999999999999988888899999999999999999999998 999999999999983 4454 599999999988
Q ss_pred cCCCCCCcccccccCCCcccccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAY-STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
.+.. .....+||..|.+||... ++.|+..+|.|||||++||.+||..||.+..+...............+......
T Consensus 175 ~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~ 251 (732)
T KOG4250|consen 175 DDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIG 251 (732)
T ss_pred CCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEe
Confidence 6643 556789999999999887 588999999999999999999999999886655433322222222222222222
Q ss_pred ccccc----------cCCCchHHHHHHHHHHHHHHccccCCCCCC--CHHHHHHHHHccc
Q 001226 1063 LDREI----------SFWDSDDQLKALRLLELALECTRQVADMRP--SMREVVGFLIKLN 1110 (1119)
Q Consensus 1063 ~~~~~----------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP--s~~ell~~L~~~~ 1110 (1119)
.++.. +............+-+.+..++..+|++|. ...+..+.+..+.
T Consensus 252 ~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 252 AQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred eecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence 22221 111122344555678888899999999999 6666555555443
No 227
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5e-33 Score=307.69 Aligned_cols=248 Identities=26% Similarity=0.446 Sum_probs=196.1
Q ss_pred ceeeecCCccEEEEEeCCCc------eEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 840 RIIGKGKHGTVYRTLSNNSR------KHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~------~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+.||+|+||.||+|...... +.||+|.+... ...+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 46899999999999876533 67999987532 34577899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-----ceEEEeccc
Q 001226 909 MPGGTLFNVLHQNE----PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-----EPKIGDFGM 979 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-----~vkl~DfGl 979 (1119)
+++++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 123478899999999999999999998 999999999999999887 899999999
Q ss_pred cccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccc
Q 001226 980 SKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHE 1058 (1119)
Q Consensus 980 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1119)
+................++..|+|||++.++.++.++|||||||++|||++ |+.||..... ..... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~---~------- 225 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQ---H------- 225 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHH---H-------
Confidence 976644332222333456788999999998999999999999999999998 9999863211 01000 0
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
+...... ......+..+.+++.+||+.+|++||+++++.+.|++
T Consensus 226 ----~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 226 ----VTAGGRL--QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ----HhcCCcc--CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0000000 0112234578899999999999999999999999864
No 228
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.4e-33 Score=312.83 Aligned_cols=256 Identities=24% Similarity=0.418 Sum_probs=200.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCce----EEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRK----HWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~----~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
+++..+.||+|+||.||+|.+..+++ .||+|.+.... ..+.+|+.+++.++||||+++++++... ..++|
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v 86 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLV 86 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceee
Confidence 44556889999999999999876665 57888875432 2567899999999999999999998654 46799
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
+||+++|+|.+++..... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++....
T Consensus 87 ~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 87 TQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred ehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccC
Confidence 999999999999876542 478899999999999999999999 999999999999999999999999999986643
Q ss_pred CCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
...........++..|+|||.+.+..++.++|||||||++||+++ |+.||..... .....+.. ..
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~----~~-------- 227 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLE----KG-------- 227 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH----CC--------
Confidence 322222223445778999999988889999999999999999997 8999864311 11111100 00
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
..... +...+.++.+++.+||..+|++||+++++++.++++..+.+
T Consensus 228 ~~~~~----~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 228 ERLPQ----PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred CCCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 00000 01123467899999999999999999999999999866554
No 229
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=7.1e-33 Score=304.26 Aligned_cols=246 Identities=26% Similarity=0.394 Sum_probs=196.2
Q ss_pred ceeeecCCccEEEEEeCC-Cc--eEEEEEecccccc-----cHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNN-SR--KHWAVKKLNRSET-----NFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~-~~--~~vavK~~~~~~~-----~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
++||+|++|.||+|.+.. .+ ..||+|.++.... .+.+|+..+++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998755 23 3699999865433 57789999999999999999999988 888999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC-C
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS-S 990 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~-~ 990 (1119)
++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++......... .
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 999999987653 3589999999999999999999999 9999999999999999999999999999876542211 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||...+..++.++||||+||++|||++ |+.||......+ ......... ...
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~--------~~~-- 220 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-----ILKKIDKEG--------ERL-- 220 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHhcC--------CcC--
Confidence 2223457789999999988889999999999999999998 999986431110 000000000 000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
..+...+..+.+++.+|++.+|++||+++++++.|.
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 --ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 001123457889999999999999999999999875
No 230
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.6e-33 Score=307.28 Aligned_cols=251 Identities=27% Similarity=0.358 Sum_probs=186.6
Q ss_pred ceeeecCCccEEEEEeCC--CceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNN--SRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+.||+|+||.||+|.... ....||+|.+... ...+.+|+..++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 358999999999996543 3457899977532 234678999999999999999999999999999999999999
Q ss_pred CHHHhhccCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 913 TLFNVLHQNEP--RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 913 sL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+|.+++..... ....++..+..++.||+.|++|||+. +|+||||||+||+++.++.+|++|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999987543 12356778899999999999999999 99999999999999999999999999987543322222
Q ss_pred cccccccCCCcccccccC-------CCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 991 TRSAIVGSLGYIAPENAY-------STRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
......++..|+|||+.. ...++.++||||+||++|||++ |..||......+ .......... ...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~~~~~~~~~~---~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ----VLKQVVREQD---IKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH----HHHHHhhccC---ccC
Confidence 223345677899999754 3456889999999999999998 778875431110 0000000000 000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
..+. .+...+..+.+++..|+ .||++|||+++|++.+.
T Consensus 231 ~~~~------~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQ------LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCc------ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0010 11123345677888898 59999999999999873
No 231
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.4e-33 Score=304.43 Aligned_cols=252 Identities=29% Similarity=0.467 Sum_probs=201.8
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+|+..++||+|+||.||+|...+ ++.||||.+... ..++.+|+..+++++|||++++++++..+...++||||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 467778999999999999999765 578999988643 3468899999999999999999999998889999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||||+||++++++.++++|||.+....... ..
T Consensus 85 ~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~~ 159 (261)
T cd05034 85 KGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-YT 159 (261)
T ss_pred CCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchh-hh
Confidence 9999999987542 3589999999999999999999999 99999999999999999999999999987664321 11
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||...+..++.++||||+|+++||+++ |+.||...... . ...... .....
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~--~~~~~~------------~~~~~ 223 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--E--VLEQVE------------RGYRM 223 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--H--HHHHHH------------cCCCC
Confidence 1122334678999999988889999999999999999998 99998543110 0 000000 00000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
..+...+..+.+++.+|++.+|++||+++++.+.|+.+
T Consensus 224 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 224 --PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred --CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 00111245688999999999999999999999999864
No 232
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8.1e-33 Score=314.90 Aligned_cols=266 Identities=18% Similarity=0.215 Sum_probs=195.2
Q ss_pred ceeeec--CCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKG--KHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G--~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
++||+| +|++||++.++.+++.||+|+++... ..+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 579999 67899999999999999999986432 3467799999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC--
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS-- 989 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~-- 989 (1119)
|+|.+++..+.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 84 GSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 999999976532 2488999999999999999999998 9999999999999999999999999865443221110
Q ss_pred ---CcccccccCCCcccccccCC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhc----------
Q 001226 990 ---STRSAIVGSLGYIAPENAYS--TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQ---------- 1054 (1119)
Q Consensus 990 ---~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~---------- 1054 (1119)
.......++..|+|||++.+ ..++.++||||+||++|||++|+.||.......... ........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 238 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPCLLDTTTIPA 238 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHhcCCccccccccchhh
Confidence 01122356778999998875 458899999999999999999999997432111000 00000000
Q ss_pred -----------ccccccc--ccccccc-----CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHccc
Q 001226 1055 -----------ENHECIC--FLDREIS-----FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF--LIKLN 1110 (1119)
Q Consensus 1055 -----------~~~~~~~--~~~~~~~-----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~--L~~~~ 1110 (1119)
....... ...+... ............+.+++.+||+.||++|||++|++++ +++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 0000000 0000000 0000112234578899999999999999999999985 44443
No 233
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.7e-33 Score=318.98 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=193.8
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||+||++.+..+++.||+|++++ ....+.+|+.+++.++|+||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 45667899999999999999999999999999853 12346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++..... .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 82 YYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred cCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 9999999999976432 488999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCcccccccCCCcccccccCC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYS-----TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
. .......||+.|+|||++.. ..++.++||||+||++|||++|+.||...... ..+.. ....
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~----~~~~~-i~~~------- 223 (331)
T cd05597 157 T-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGK-IMNH------- 223 (331)
T ss_pred C-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH----HHHHH-HHcC-------
Confidence 1 12223468999999998763 45788999999999999999999998642110 00000 0000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCC--CCCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVAD--MRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~--~RPs~~ell~~ 1105 (1119)
....... ......+..+.+++.+|+..+++ .||++++++++
T Consensus 224 -~~~~~~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 224 -KEHFQFP-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -CCcccCC-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0000000 00111344667888887765444 38899999987
No 234
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.3e-33 Score=321.34 Aligned_cols=257 Identities=25% Similarity=0.295 Sum_probs=195.1
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC------C
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD------E 900 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 900 (1119)
+.+|+..+.||+|+||.||+|.+..+++.||||++... ...+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 46788889999999999999999999999999998542 23466899999999999999999987543 3
Q ss_pred ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccc
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMS 980 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla 980 (1119)
..|+||||+++ ++.+++.. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 56999999965 67777643 377889999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhc------
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQ------ 1054 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 1054 (1119)
+..... .......+|+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+......
T Consensus 174 ~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~~ 246 (364)
T cd07875 174 RTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI----DQWNKVIEQLGTPCP 246 (364)
T ss_pred cccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCCH
Confidence 865432 1223456899999999999999999999999999999999999999643211 000000000
Q ss_pred ---------------ccc-----ccccccccc-ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1055 ---------------ENH-----ECICFLDRE-ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1055 ---------------~~~-----~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
... ......... ..............+.+++.+|++.||++|||++|+++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 000000000 000000011123467899999999999999999999987
No 235
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-33 Score=340.50 Aligned_cols=250 Identities=23% Similarity=0.355 Sum_probs=194.5
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeec--CCceEEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTK--DEHGFIV 905 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV 905 (1119)
.+|+..+.||+|+||+||+|.+..++..||+|++... ...+..|+.+++.++|||||+++++|.+ ....|+|
T Consensus 13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence 4677789999999999999999999999999988532 2457789999999999999999998854 3568999
Q ss_pred EeccCCCCHHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCC----CCeEecCCCCCCeEeCC------------
Q 001226 906 TEYMPGGTLFNVLHQNEP-RLVLDWNTRYHIALGIAQGLSYLHYDCV----PQIIHRDIKSDNILLDS------------ 968 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~ivH~Dlkp~Nill~~------------ 968 (1119)
|||+++|+|.+++..... ...+++..++.|+.||+.||.|||+... .+||||||||+|||++.
T Consensus 93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~ 172 (1021)
T PTZ00266 93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA 172 (1021)
T ss_pred EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence 999999999999976422 2358999999999999999999998521 25999999999999964
Q ss_pred -----CCceEEEeccccccccCCCCCCcccccccCCCcccccccCC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC
Q 001226 969 -----ELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYS--TRLTEKSDVYSYGVILFELLFRKMPVDPSFGE 1041 (1119)
Q Consensus 969 -----~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~ 1041 (1119)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 173 ~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-- 247 (1021)
T PTZ00266 173 NNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-- 247 (1021)
T ss_pred cccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC--
Confidence 2458999999998664321 2234578999999998754 458899999999999999999999996421
Q ss_pred CCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 001226 1042 DTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVG 1104 (1119)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~ 1104 (1119)
........ .... +.+. ....+..+.+++..||+.+|++||++.|+++
T Consensus 248 --~~~qli~~-lk~~--------p~lp-----i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 --NFSQLISE-LKRG--------PDLP-----IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred --cHHHHHHH-HhcC--------CCCC-----cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 11111000 0000 0010 0112456789999999999999999999985
No 236
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.9e-33 Score=310.62 Aligned_cols=246 Identities=26% Similarity=0.389 Sum_probs=199.1
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+|+..+.||.|+||.||+|.+..+++.||+|.+... ...+.+|+..++.++|||++++++++..++..++|+||++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 99 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLA 99 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecC
Confidence 566778999999999999999999999999988532 2456789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++........
T Consensus 100 ~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-- 170 (296)
T cd06655 100 GGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-- 170 (296)
T ss_pred CCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc--
Confidence 99999988653 378999999999999999999999 999999999999999999999999999876543221
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
......++..|+|||.+.+..++.++||||+||++|+|++|+.||........ ..... .... +..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~----~~~~~-~~~~-------~~~--- 235 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIA-TNGT-------PEL--- 235 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHH-hcCC-------ccc---
Confidence 12334688899999999888899999999999999999999999865321100 00000 0000 000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+..+.+++.+||+.+|++||++++++++
T Consensus 236 -~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 236 -QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred -CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0111223467899999999999999999999865
No 237
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.2e-32 Score=304.91 Aligned_cols=254 Identities=27% Similarity=0.404 Sum_probs=200.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCC---ceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNS---RKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+++..+.||+|+||.||+|.+... ...||||...... +.+.+|+.+++.++||||+++++++.+ ...++||
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~ 85 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM 85 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence 466678999999999999987543 4568999875432 357889999999999999999998875 4578999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++.....
T Consensus 86 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 86 ELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 99999999999976543 489999999999999999999998 9999999999999999999999999998766443
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
... ......++..|+|||......++.++||||+|+++||+++ |+.||......+ ... ... ...
T Consensus 161 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~--~~~--~~~-------- 225 (270)
T cd05056 161 SYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIG--RIE--NGE-------- 225 (270)
T ss_pred cce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHH--HHH--cCC--------
Confidence 211 1222334568999999888889999999999999999986 999986542111 000 000 000
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
... .+...+..+.+++.+|+..+|++|||+.++++.|+++..+.
T Consensus 226 ~~~----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 226 RLP----MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred cCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 000 01122457889999999999999999999999999988764
No 238
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=8.8e-33 Score=308.38 Aligned_cols=267 Identities=25% Similarity=0.388 Sum_probs=202.4
Q ss_pred hhCCceeeecCCccEEEEEeCC----CceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeec--CCceEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNN----SRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTK--DEHGFI 904 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~----~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 904 (1119)
++..+.||+|+||.||+|.... ++..||||+++... ..+.+|+..++.++||||+++++++.. +...++
T Consensus 6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05038 6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRL 85 (284)
T ss_pred chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEE
Confidence 4445889999999999998653 47889999986433 368899999999999999999999877 557899
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 86 v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 86 IMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999999987653 489999999999999999999998 99999999999999999999999999998775
Q ss_pred CCCCC-CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 985 DSHSS-STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 985 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
..... .......++..|+|||...+..++.++||||+|+++|||++|+.|+............... ...........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 239 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQ-GQMIVTRLLELL 239 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccc-ccccHHHHHHHH
Confidence 32221 1112234566799999998888999999999999999999999998653221111000000 000000000111
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
...... ..+...+.++.+++.+||+.+|++||+++||+++|+++.
T Consensus 240 ~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 240 KEGERL--PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HcCCcC--CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 111110 011123357889999999999999999999999999863
No 239
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.1e-32 Score=303.72 Aligned_cols=249 Identities=30% Similarity=0.466 Sum_probs=190.4
Q ss_pred ceeeecCCccEEEEEeCC---CceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeee-cCCceEEEEeccC
Q 001226 840 RIIGKGKHGTVYRTLSNN---SRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCT-KDEHGFIVTEYMP 910 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e~~~ 910 (1119)
+.||+|+||.||+|.+.. ....||+|.+... ...+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998643 3467999988532 235678999999999999999999775 4556799999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC-
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS- 989 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~- 989 (1119)
+++|.+++..... ..++..+..++.|+++|++|||+. +++||||||+||++++++.+|++|||+++........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 9999999976543 367788899999999999999998 9999999999999999999999999998765432111
Q ss_pred -CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCC-CCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 990 -STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRK-MPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 990 -~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
.......++..|+|||...+..++.++|||||||++|||++|. .||.... ... ........ ...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~---~~~~~~~~---------~~~ 221 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFD---ITVYLLQG---------RRL 221 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHH---HHHHHhcC---------CCC
Confidence 1112334577899999988888999999999999999999965 4443211 001 11100000 000
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
. .+...+..+.+++.+||+.+|++||++.|+++.++++..
T Consensus 222 ~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 L----QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred C----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0 011123467899999999999999999999999998754
No 240
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.2e-32 Score=304.23 Aligned_cols=255 Identities=24% Similarity=0.373 Sum_probs=203.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
+|+..+.||.|+||+||+|....++..||+|++... ...+.+|+..++.++|+|++++++.+..++..++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 466778999999999999999888999999988532 245788999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.++++...+...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||++.........
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 9999999998754434589999999999999999999998 9999999999999999999999999998776543222
Q ss_pred C--cccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 990 S--TRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 990 ~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
. ......++..|+|||.+... .++.++|+||+||++|||++|+.||....... ......... ...
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~----~~~~~~~~~--------~~~ 226 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK----VLMLTLQND--------PPS 226 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh----hHHHHhcCC--------CCC
Confidence 1 23345688999999988776 78999999999999999999999986432110 011100000 000
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.... ......+..+.+++.+|++.+|++||++++++++
T Consensus 227 ~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 227 LETG-ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cCCc-cccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1000 0011234567899999999999999999999875
No 241
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.7e-32 Score=300.04 Aligned_cols=245 Identities=28% Similarity=0.443 Sum_probs=195.8
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
++||+|+||.||+|.+.. ++.||+|.++.. ...+.+|+.+++.++||||+++++++.+....++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 469999999999999888 899999988643 23578899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++..... .+++..+..++.+++.|++|||+. +++||||+|+||+++.++.++++|||.+..............
T Consensus 80 ~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 80 LTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 999976532 478889999999999999999999 999999999999999999999999999976543221111122
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCch
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSD 1073 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1119)
...+..|+|||.+.++.++.++|+||+||++|||++ |..||...... ... .. ..... .. ..
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~---~~-~~~~~--------~~----~~ 216 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTR---ER-IESGY--------RM----PA 216 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHH---HH-HhcCC--------CC----CC
Confidence 334667999999888889999999999999999998 88887543211 000 00 00000 00 01
Q ss_pred HHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1074 DQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1074 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
+...+..+.+++.+|++.+|++||+++|+++.|++
T Consensus 217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 11234578899999999999999999999998863
No 242
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.2e-32 Score=302.39 Aligned_cols=248 Identities=27% Similarity=0.371 Sum_probs=201.8
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|+..+.||.|+||.||.++...+++.|++|.+... ..++.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 356678999999999999999999999999987432 23577899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++.... ...+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999998754 23588999999999999999999998 999999999999999999999999999886644221
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......+++.|+|||...+..++.++||||+|+++|||++|+.||...... ..... .......
T Consensus 157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~~~~----------~~~~~~~ 219 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-----NLVVK----------IVQGNYT 219 (256)
T ss_pred --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH----------HHcCCCC
Confidence 223456899999999998888899999999999999999999998642110 00000 0001111
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
......+.++.+++.+||+.+|++||++++++++.
T Consensus 220 ---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 220 ---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ---CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 01122345688999999999999999999999863
No 243
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.1e-32 Score=302.62 Aligned_cols=248 Identities=23% Similarity=0.419 Sum_probs=198.0
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+++..+.||+|+||.||+|.+.. ++.+|+|.++.. ..++.+|++++++++||+++++++++......++||||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 45666889999999999998864 678999988643 35688999999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++..... .++++.+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+........ ..
T Consensus 84 ~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~ 157 (256)
T cd05112 84 GCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TS 157 (256)
T ss_pred CcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc-cc
Confidence 999999976542 478899999999999999999999 999999999999999999999999999876543211 11
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.....++.+|+|||...++.++.++||||+|+++|||++ |+.||..... .. .... .... .....
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~---~~~~-~~~~---~~~~~------ 222 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--SE---VVET-INAG---FRLYK------ 222 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--HH---HHHH-HhCC---CCCCC------
Confidence 222345678999999988889999999999999999998 9999864211 00 0000 0000 00000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
+...+..+.+++.+||+.+|++||+++|+++.|+
T Consensus 223 ---~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 ---PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 0112357889999999999999999999999873
No 244
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3e-33 Score=320.87 Aligned_cols=257 Identities=25% Similarity=0.321 Sum_probs=193.1
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecC------Cc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKD------EH 901 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 901 (1119)
.+|+..+.||+|+||.||+|.+..+++.||||++.... ..+.+|+.+++.++||||+++++++... ..
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 46777899999999999999999999999999986432 3466799999999999999999987543 34
Q ss_pred eEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccc
Q 001226 902 GFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSK 981 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~ 981 (1119)
.|+++|++ +++|.+++... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 95 ~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 95 VYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLAR 166 (343)
T ss_pred EEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccce
Confidence 68999988 78998887643 388999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccc--
Q 001226 982 LISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHE-- 1058 (1119)
Q Consensus 982 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1058 (1119)
..... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ ....+..........
T Consensus 167 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (343)
T cd07878 167 QADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVVGTPSPEVL 240 (343)
T ss_pred ecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 65432 223468999999998876 568899999999999999999999986431110 000000000000000
Q ss_pred -------ccccccccccCCCchH-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 -------CICFLDREISFWDSDD-----QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 -------~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....+ ..+....... ......+.+++.+|++.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 241 KKISSEHARKYI-QSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HhcchhhHHHHh-hccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000000000 0112346799999999999999999999987
No 245
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.2e-32 Score=306.85 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=195.6
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
|+..+.||+|+||.||+|.+..++..+|+|.+... ...+.+|+.+++.++|||++++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 44557899999999999999999999999988532 23577899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++.... ..+++..+..++.|+++|+.|||+. +++||||||+||+++.++.+|++|||++....... ..
T Consensus 87 ~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~ 159 (282)
T cd06643 87 GAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QR 159 (282)
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc--cc
Confidence 99998886533 2489999999999999999999999 99999999999999999999999999987653321 12
Q ss_pred ccccccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 992 RSAIVGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
.....++..|+|||.+. +..++.++||||+||++|||++|+.||...... ........ . . ...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~-~--~-----~~~ 227 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM----RVLLKIAK-S--E-----PPT 227 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH----HHHHHHhh-c--C-----CCC
Confidence 23456889999999873 345788999999999999999999998642110 00000000 0 0 000
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ..+...+..+.+++.+||+.+|++||++++++++
T Consensus 228 ~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 228 L----AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred C----CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0111224567899999999999999999999875
No 246
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.4e-32 Score=304.64 Aligned_cols=252 Identities=29% Similarity=0.413 Sum_probs=197.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc--------------cccHHHHHHHHhhcCCCCEEEEeeeeecCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS--------------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE 900 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 900 (1119)
+|...+.||+|+||.||+|....+++.||+|.++.. .+.+..|+.+++.++|||++++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 456678999999999999999888999999987421 124677999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccc
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMS 980 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla 980 (1119)
..++||||+++++|.++++... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999998764 488899999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCCcccccccCCCcccccccCCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccc
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAYSTR--LTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHE 1058 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1119)
+...............++..|+|||...... ++.++|+||+|+++||+++|..||..... ...... .... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~--~~~~-~ 228 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMFK--LGNK-R 228 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHHH--hhcc-c
Confidence 7654322222223345788999999877654 78999999999999999999999853211 000000 0000 0
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....+.. ......+..+.+++.+|++.+|++||++++++++
T Consensus 229 ~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 229 SAPPIPP------DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCcCCc------cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0000000 1111234578899999999999999999999875
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.9e-32 Score=302.95 Aligned_cols=244 Identities=26% Similarity=0.396 Sum_probs=199.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
.|+..+.||.|+||.||+|.+..++..||+|+++... ..+.+|+.+++.+.||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3455678999999999999999889999999886432 35778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++... .+++..+..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06640 85 GGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence 999999998753 378889999999999999999998 99999999999999999999999999997664322
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
.......++..|+|||.+.+..++.++|+|||||++|||++|..||......... . ......
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-----~-----------~~~~~~-- 217 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-----F-----------LIPKNN-- 217 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-----h-----------hhhcCC--
Confidence 1222346788999999998888999999999999999999999998643211000 0 000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
........+..+.+++.+||+.+|++||++++++++
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 001122345678899999999999999999999887
No 248
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.3e-32 Score=302.76 Aligned_cols=236 Identities=24% Similarity=0.394 Sum_probs=184.3
Q ss_pred ceeeecCCccEEEEEeCC------------CceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 840 RIIGKGKHGTVYRTLSNN------------SRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~------------~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
+.||+|+||.||+|.... ....||+|++.... ..+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 23468999875432 34677889999999999999999999988999
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCc-------eEEEe
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELE-------PKIGD 976 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-------vkl~D 976 (1119)
+||||+++++|..+++.... .+++..+.+++.||++|++|||+. +|+||||||+||+++.++. ++++|
T Consensus 81 lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 99999999999988875432 488999999999999999999999 9999999999999987664 89999
Q ss_pred ccccccccCCCCCCcccccccCCCcccccccC-CCCCCCcchHHHHHHHHHHHH-hCCCCCCCCCCCCCceeehhhhhhc
Q 001226 977 FGMSKLISDSHSSSTRSAIVGSLGYIAPENAY-STRLTEKSDVYSYGVILFELL-FRKMPVDPSFGEDTDIVTWTRWKLQ 1054 (1119)
Q Consensus 977 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~ 1054 (1119)
||.+..... .....++..|+|||.+. +..++.++|||||||++|||+ +|+.||......+ ....
T Consensus 156 ~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----~~~~--- 221 (262)
T cd05077 156 PGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE-----KERF--- 221 (262)
T ss_pred CCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH-----HHHH---
Confidence 998865432 22345788999999876 466899999999999999998 5888875321110 0000
Q ss_pred ccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1055 ENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
........ ......+.+++.+||+.||++||++++|++++
T Consensus 222 --------~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 --------YEGQCMLV----TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --------HhcCccCC----CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00000000 01124678999999999999999999999876
No 249
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.4e-33 Score=305.56 Aligned_cols=249 Identities=24% Similarity=0.330 Sum_probs=197.1
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|+++... ..+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 5566688999999999999999999999999885432 346789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++...+ .+++.++..++.|++.|+.|||+. +++|+||||+||+++.++.++++|||.+...... ..
T Consensus 90 ~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--~~ 161 (267)
T cd06645 90 GGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--IA 161 (267)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc--cc
Confidence 999999987654 488999999999999999999999 9999999999999999999999999998765432 12
Q ss_pred cccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 991 TRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
......|+..|+|||.+. ...++.++|+||+||++|||++|+.||....... ........ ....+..
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-~~~~~~~~---------~~~~~~~ 231 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-ALFLMTKS---------NFQPPKL 231 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-hHHhhhcc---------CCCCCcc
Confidence 223456899999999874 4567889999999999999999999985432111 00000000 0000000
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. .....+..+.+++.+|++.+|++||++++++++
T Consensus 232 ~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 232 K----DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred c----ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0 001123457899999999999999999999875
No 250
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=9e-33 Score=308.30 Aligned_cols=261 Identities=21% Similarity=0.255 Sum_probs=195.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||+|.+..+|+.||+|+++.. ...+.+|+.+++.++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 55668899999999999999999999999988532 235678999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
+ +++.+++..... .+++..+..++.||++|+.|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 82 ~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 82 D-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred C-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 6 588888765432 489999999999999999999999 99999999999999999999999999987654321
Q ss_pred CcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCcee------------ehhhhhhccc
Q 001226 990 STRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIV------------TWTRWKLQEN 1056 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~------------~~~~~~~~~~ 1056 (1119)
.......++..|+|||.+.+. .++.++||||+||++|||++|+.|+........... .|........
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 122234578899999987664 478999999999999999999999754322111000 0000000000
Q ss_pred ccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1057 HECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......... ...+.........++.+++.+||+.||++|||+++++++
T Consensus 234 ~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 234 YKPYPMYPA-TTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred ccccCCCCC-cchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000000000 000000111234577899999999999999999999875
No 251
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.3e-34 Score=316.71 Aligned_cols=240 Identities=25% Similarity=0.399 Sum_probs=193.2
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEec------cccc--ccHHHHHHHHhhcCCCCEEEEeeeeecCCc--eEEEEecc
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKL------NRSE--TNFDVEIRTLSLVRHRNILRIVGSCTKDEH--GFIVTEYM 909 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~------~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lV~e~~ 909 (1119)
.+||+|+|-+||+|.+..+|..||--.+ +... +.+..|+.+++.++|||||++++++.+... .-+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 4599999999999999999998875433 2222 568899999999999999999999987654 67899999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC-CceEEEeccccccccCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE-LEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~vkl~DfGla~~~~~~~~ 988 (1119)
..|+|..|.++++. ++.+..+.|++||.+||.|||++ .|+|+|||||-+||+|+.+ |.|||+|.|+|......
T Consensus 126 TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s-- 199 (632)
T KOG0584|consen 126 TSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS-- 199 (632)
T ss_pred cCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc--
Confidence 99999999999874 88899999999999999999997 6799999999999999865 89999999999987543
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.....+|||.|||||... ..|++.+||||||+.+.||+|+.+||........-+....... .+..+..+
T Consensus 200 --~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi--KP~sl~kV------ 268 (632)
T KOG0584|consen 200 --HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI--KPAALSKV------ 268 (632)
T ss_pred --ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC--CHHHhhcc------
Confidence 223478999999999665 8899999999999999999999999975432211110000000 01111111
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...++.++|.+|+.. ..+|||+.|++++
T Consensus 269 --------~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 269 --------KDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred --------CCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 123678999999999 8899999999874
No 252
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.7e-32 Score=302.85 Aligned_cols=247 Identities=26% Similarity=0.397 Sum_probs=192.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---------cccHHHHHHHHhhcCCCCEEEEeeeeec--CCceE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---------ETNFDVEIRTLSLVRHRNILRIVGSCTK--DEHGF 903 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 903 (1119)
.|+.++.||+|+||.||+|.+..+++.||+|+++.. ...+.+|+.+++.++||||+++++++.+ +...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 356678999999999999999999999999987422 1346789999999999999999998865 35678
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+++||+++++|.+++.... .+++.....++.|++.|++|||+. +++||||+|+||+++.++.++++|||+++..
T Consensus 83 l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 9999999999999997654 378889999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCC-CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 984 SDSHS-SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 984 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
..... ........++..|+|||.+.+..++.++||||+||++||+++|+.||..... ...... .. ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~--~~-----~~~ 225 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFK--IA-----TQP 225 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHH--Hh-----cCC
Confidence 32111 1112234578899999999888899999999999999999999999864211 000000 00 000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+. .+......+.+++ +||..+|++||+++||++|
T Consensus 226 ~~~~------~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 226 TNPQ------LPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CCCC------CchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 0011 1122233455666 6888999999999999864
No 253
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.4e-33 Score=316.17 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=194.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..++||+|+||.||+++++.+++.||+|++.+. ...+.+|+.++..++|++|+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 355678999999999999999999999999998531 2236788999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++++... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 y~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 82 YYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred ccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999986432 488889999999999999999999 99999999999999999999999999987553321
Q ss_pred CCCcccccccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
........||+.|+|||++. ...++.++||||+||++|||++|+.||...... ..... ....
T Consensus 157 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~----~~~~~-i~~~------- 223 (332)
T cd05623 157 -TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGK-IMNH------- 223 (332)
T ss_pred -cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH----HHHHH-HhCC-------
Confidence 12223457899999999875 346789999999999999999999999643110 00000 0000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADM--RPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ell~~ 1105 (1119)
...... .......+..+.+++.+|+..+|++ |++++|+++|
T Consensus 224 -~~~~~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 224 -KERFQF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -CccccC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 000000 0111123456788899988665544 7899999988
No 254
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2e-32 Score=302.75 Aligned_cols=245 Identities=27% Similarity=0.382 Sum_probs=192.5
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLF 915 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 915 (1119)
..||+|+||.||+|.+..++..||+|.+... ...+.+|+.+++.++|+||+++++++..++..++|+||+++++|.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 5799999999999999988999999987543 345788999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC-CCceEEEeccccccccCCCCCCcccc
Q 001226 916 NVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS-ELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 916 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
+++.........++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++++|||.+....... .....
T Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~--~~~~~ 168 (268)
T cd06624 94 ALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN--PCTET 168 (268)
T ss_pred HHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCC--Ccccc
Confidence 9998653222237888899999999999999998 9999999999999986 6789999999987654321 11223
Q ss_pred cccCCCcccccccCCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 995 IVGSLGYIAPENAYST--RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
..+++.|+|||+.... .++.++||||+|+++|||++|+.||........ ..+...... ..+.
T Consensus 169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~~~~--------~~~~------ 232 (268)
T cd06624 169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVGMFK--------IHPE------ 232 (268)
T ss_pred CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhhhhc--------cCCC------
Confidence 4578999999987654 378899999999999999999999864311110 000000000 0000
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+.....++.+++.+||+.+|++|||++|++++
T Consensus 233 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 233 IPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 111234567899999999999999999999875
No 255
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.6e-32 Score=303.00 Aligned_cols=247 Identities=26% Similarity=0.392 Sum_probs=195.9
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc----------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE----------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
|+.++.||+|+||.||+|... +++.||+|.++... ..+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred ccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 567789999999999999864 57899999875321 3477899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
|||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||.+.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997654 378899999999999999999998 999999999999999999999999999876532
Q ss_pred CC----CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 986 SH----SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 986 ~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
.. .........++..|+|||+..+..++.++||||+||++|||++|+.||....... .... ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~-~~~~~~---- 225 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA----AMFY-IGAHRG---- 225 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH----HHHH-hhhccC----
Confidence 11 1111223468899999999988889999999999999999999999986431100 0000 000000
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+.. +...+..+.+++++||+.+|++||++.+++++
T Consensus 226 -~~~~~------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 226 -LMPRL------PDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred -CCCCC------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00011 11234567899999999999999999999863
No 256
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.7e-32 Score=304.36 Aligned_cols=245 Identities=29% Similarity=0.401 Sum_probs=199.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
+|+..+.||.|+||.||+|.+..+++.||+|.+.... ..+.+|+.+++.++|+|++++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 4556688999999999999999999999999885432 35778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.++......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 82 GGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 999999999865 488999999999999999999998 99999999999999999999999999998775432
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
.......+++.|+|||...+..++.++||||+|+++|||++|+.||....... .. ..... ...+....
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-----~~-~~~~~------~~~~~~~~ 220 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-----VL-FLIPK------NNPPSLEG 220 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-----HH-HHhhh------cCCCCCcc
Confidence 12233467889999999988889999999999999999999999986432100 00 00000 00000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...+..+.+++.+|++.+|++||++++++++
T Consensus 221 -----~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 221 -----NKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -----cccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0134467899999999999999999999875
No 257
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5e-33 Score=316.76 Aligned_cols=251 Identities=21% Similarity=0.293 Sum_probs=194.8
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||++++..+++.||+|++.+. ...+.+|+.+++.++|++|+++++++.+++..|+|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 356678999999999999999999999999988532 2336778999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++|+|.+++..... .+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 y~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 82 YYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred CCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999986432 488899999999999999999999 99999999999999999999999999997664322
Q ss_pred CCCcccccccCCCcccccccCC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYS-----TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
. .......||+.|+|||++.+ +.++.++||||+||++|||++|+.||...... ..+.. ....
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~----~~~~~-i~~~------- 223 (331)
T cd05624 157 T-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGK-IMNH------- 223 (331)
T ss_pred c-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH----HHHHH-HHcC-------
Confidence 1 12233568999999998765 46788999999999999999999999643110 00000 0000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADM--RPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ell~~ 1105 (1119)
...... .......+.++.+++.+|+...+.+ |+++++++++
T Consensus 224 -~~~~~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 224 -EERFQF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -CCcccC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 000000 0000112456788999999876654 5689988876
No 258
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-32 Score=306.07 Aligned_cols=243 Identities=28% Similarity=0.425 Sum_probs=197.2
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|+..+.||+|+||.||+|.+..+++.||+|.++... ..+.+|+.+++.++||||+++++++..+...++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 445577999999999999998889999999886332 357889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++... .+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++++|||++....... .
T Consensus 86 ~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~ 156 (277)
T cd06642 86 GGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--I 156 (277)
T ss_pred CCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc--h
Confidence 99999998643 378899999999999999999998 99999999999999999999999999987654321 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
......++..|+|||...+..++.++|||||||++|||++|+.||........ ... .... ..+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~-~~~~------~~~----- 219 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFL-IPKN------SPP----- 219 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----Hhh-hhcC------CCC-----
Confidence 22234578899999999888899999999999999999999999864321110 000 0000 000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+..+.+++.+||+.+|++||++.+++++
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 220 -TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0111234567899999999999999999999985
No 259
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.9e-32 Score=301.23 Aligned_cols=236 Identities=22% Similarity=0.355 Sum_probs=188.5
Q ss_pred ceeeecCCccEEEEEeCCCc----------eEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 840 RIIGKGKHGTVYRTLSNNSR----------KHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~----------~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+.||+|+||.||+|.+..++ ..|++|.+... ...+.+|+.+++.++||||+++++++.. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46999999999999998766 45888877543 3467889999999999999999999988 7789999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-------ceEEEeccc
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-------EPKIGDFGM 979 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-------~vkl~DfGl 979 (1119)
||+++|+|.+++..... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++ .+|++|||+
T Consensus 80 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 80 EYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 99999999999987653 488999999999999999999998 999999999999999887 799999999
Q ss_pred cccccCCCCCCcccccccCCCcccccccCCC--CCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccc
Q 001226 980 SKLISDSHSSSTRSAIVGSLGYIAPENAYST--RLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQEN 1056 (1119)
Q Consensus 980 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1056 (1119)
+..... .....++..|+|||++.+. .++.++||||+||++||+++ |..||...... .+..... ..
T Consensus 155 a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-----~~~~~~~-~~ 222 (259)
T cd05037 155 PITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-----EKERFYQ-DQ 222 (259)
T ss_pred cccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-----hHHHHHh-cC
Confidence 886533 2234567789999988776 78999999999999999999 57776543111 0101000 00
Q ss_pred ccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1057 HECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
...... ....+.+++.+||+.+|++||++.++++.|+
T Consensus 223 --------~~~~~~------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 --------HRLPMP------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --------CCCCCC------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000000 0157789999999999999999999998763
No 260
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.8e-32 Score=301.55 Aligned_cols=251 Identities=24% Similarity=0.423 Sum_probs=198.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.+|...++||+|+||.||+|.+.. +..||+|.+... .+.+.+|+.++++++|+|++++.+++.+ ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecC-CccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 356677899999999999998654 567999988643 3467889999999999999999999887 77899999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++..... ...++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||.+........ .
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 158 (260)
T cd05073 84 KGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-T 158 (260)
T ss_pred CCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc-c
Confidence 9999999976542 3578889999999999999999998 999999999999999999999999999876543221 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||++....++.++|+||+||++||+++ |+.||..... .+.. .... ... ..
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~---~~~~-~~~--------~~-- 222 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVI---RALE-RGY--------RM-- 222 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHH---HHHh-CCC--------CC--
Confidence 2222345678999999988889999999999999999998 8999864311 1110 0000 000 00
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
......+..+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 223 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 223 --PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred --CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 00112345688999999999999999999999999863
No 261
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.7e-32 Score=303.80 Aligned_cols=236 Identities=22% Similarity=0.326 Sum_probs=183.4
Q ss_pred eeeecCCccEEEEEeCC------------------------CceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEE
Q 001226 841 IIGKGKHGTVYRTLSNN------------------------SRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRI 892 (1119)
Q Consensus 841 ~lG~G~fg~Vy~~~~~~------------------------~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l 892 (1119)
.||+|+||.||+|.... ....||+|+++... ..+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999987432 12458999886432 356778899999999999999
Q ss_pred eeeeecCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC--
Q 001226 893 VGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-- 970 (1119)
Q Consensus 893 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-- 970 (1119)
++++.++...++||||+++|+|.+++..... .+++..+..++.|+++|++|||+. +|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcc
Confidence 9999999999999999999999999876432 478999999999999999999998 999999999999997643
Q ss_pred -----ceEEEeccccccccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHH-hCCCCCCCCCCCCC
Q 001226 971 -----EPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELL-FRKMPVDPSFGEDT 1043 (1119)
Q Consensus 971 -----~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~ell-tg~~p~~~~~~~~~ 1043 (1119)
.+|++|||.+..... .....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||........
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALS------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred cCccceeeecCCcccccccc------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 479999998764322 122356788999998865 56899999999999999995 78988864321110
Q ss_pred ceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1044 DIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
..+ ........ .....++.+++.+||+.+|++||++++|++.|+
T Consensus 231 --~~~--------------~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 --ERF--------------YEKKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred --HHH--------------HHhccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 000 00000000 011235789999999999999999999999873
No 262
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.3e-32 Score=305.41 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=194.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhc-CCCCEEEEeeeee-----cCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLV-RHRNILRIVGSCT-----KDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~-----~~~~~~lV 905 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|+.+.. ..++.+|+.+++.+ +||||+++++++. .++..++|
T Consensus 19 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv 98 (286)
T cd06638 19 TWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLV 98 (286)
T ss_pred ceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEE
Confidence 556668899999999999999999999999987542 24577899999999 6999999999874 34568999
Q ss_pred EeccCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 906 TEYMPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
|||+++++|.++++... ....+++..+..++.|+++|+.|||+. +++||||||+||+++.++.++++|||+++...
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 175 (286)
T cd06638 99 LELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 175 (286)
T ss_pred EeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence 99999999999876432 223578889999999999999999998 99999999999999999999999999987664
Q ss_pred CCCCCCcccccccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHEC 1059 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1119)
... .......+++.|+|||++. +..++.++||||+||++|||++|+.||...... ........ ...
T Consensus 176 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-~~~~~~~~------~~~ 246 (286)
T cd06638 176 STR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-RALFKIPR------NPP 246 (286)
T ss_pred cCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-HHHhhccc------cCC
Confidence 321 1223346899999999875 345788999999999999999999998643111 00000000 000
Q ss_pred cccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1060 ICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
....+ +...+..+.+++.+||+.+|++|||++|++++.
T Consensus 247 ~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 247 PTLHQ---------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CcccC---------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00000 011234678999999999999999999999864
No 263
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.2e-32 Score=305.04 Aligned_cols=248 Identities=23% Similarity=0.352 Sum_probs=195.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.|+..++||+|+||.||+|.+..+++.||+|.+.... ..+.+|+.+++.++||||+++++.+..++..++||||++
T Consensus 13 ~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (292)
T cd06644 13 VWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCP 92 (292)
T ss_pred hhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCC
Confidence 4556688999999999999999999999999986432 346779999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
++++..++.+... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+...... ..
T Consensus 93 ~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~ 165 (292)
T cd06644 93 GGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--LQ 165 (292)
T ss_pred CCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc--cc
Confidence 9999888765432 488999999999999999999998 9999999999999999999999999988754321 11
Q ss_pred cccccccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 991 TRSAIVGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
......+++.|+|||++. ...++.++||||+||++|||++|+.||...... . ...... .. . .+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~---~~~~~~--~~-~-----~~ 233 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-R---VLLKIA--KS-E-----PP 233 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-H---HHHHHh--cC-C-----Cc
Confidence 223346788999999874 345788999999999999999999998642110 0 000000 00 0 00
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.. ..+...+.++.+++.+||+.+|++||++++++++
T Consensus 234 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 234 TL----SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cC----CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00 0111233467899999999999999999999874
No 264
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.7e-33 Score=319.31 Aligned_cols=238 Identities=25% Similarity=0.318 Sum_probs=185.6
Q ss_pred eeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhc---CCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLV---RHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
||+|+||+||+|++..+++.||+|++.... .....|..++... +||+|+++++++.++...|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999999999999999985321 1233455666554 699999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.+++.... .+++..+..++.||++|++|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~ 152 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KT 152 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CC
Confidence 99999987654 488999999999999999999999 99999999999999999999999999987543211 12
Q ss_pred ccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 992 RSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.....||+.|+|||.+.+. .++.++||||+||++|||++|+.||..... .......... ...+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~--------~~~~~-- 217 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFG--------KVRFP-- 217 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcC--------CCCCC--
Confidence 2345689999999988754 478999999999999999999999864311 0000000000 00011
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCC----CHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRP----SMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RP----s~~ell~~ 1105 (1119)
....+..+.+++.+||+.||++|| ++++++++
T Consensus 218 ---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 218 ---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred ---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 011234667999999999999998 57777664
No 265
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.6e-32 Score=303.41 Aligned_cols=250 Identities=25% Similarity=0.422 Sum_probs=199.2
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc----------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
|+.++.||+|+||.||+|.+..+++.||+|++... ...+.+|++++++++|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 56678899999999999999999999999988532 24577899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-ceEEEecccccccc
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-EPKIGDFGMSKLIS 984 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~vkl~DfGla~~~~ 984 (1119)
|||+++++|.+++.+.+ .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++ .++++|||.+....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 82 VEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999997654 478899999999999999999999 999999999999998876 58999999987665
Q ss_pred CCCCC--CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 985 DSHSS--STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 985 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
..... .......++..|+|||...+..++.++||||+|+++|||++|+.||........ ..... .... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~-~~~~-----~- 226 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH--LALIF-KIAS-----A- 226 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch--HHHHH-HHhc-----c-
Confidence 42111 112234678899999998888899999999999999999999999863211100 00000 0000 0
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+.....++.+++.+|++.+|++||++.+++++
T Consensus 227 -----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 227 -----TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -----CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00011122345678899999999999999999999864
No 266
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-33 Score=305.23 Aligned_cols=246 Identities=23% Similarity=0.365 Sum_probs=193.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e 907 (1119)
.|+..++||+||.+.||++...+. +.||+|++.. ..+.|..|+..+.+++ |.+||++++|-..++..|+|||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 466668999999999999988774 4556665531 2345889999999996 9999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|- ..+|..+++..... ...| .++.+..||+.|+.++|.+ ||||.||||.|+++- .|.+|++|||.|..+....
T Consensus 441 ~G-d~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred cc-cccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCccc
Confidence 86 67999999887642 2334 7788999999999999999 999999999999884 5689999999999888766
Q ss_pred CCCcccccccCCCcccccccCCC-----------CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYST-----------RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQEN 1056 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1056 (1119)
........+||+-||+||.+... ..++++||||+||++|+|+.|+.||..... .|.
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~a------- 580 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QIA------- 580 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HHH-------
Confidence 66677788999999999976532 256899999999999999999999863210 111
Q ss_pred ccccccccccc--cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1057 HECICFLDREI--SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1057 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+..+.++.- .+.... ...++.++|+.||++||.+||+..+++++
T Consensus 581 -Kl~aI~~P~~~Iefp~~~---~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 581 -KLHAITDPNHEIEFPDIP---ENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred -HHHhhcCCCccccccCCC---CchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 1223334322 221111 11237899999999999999999999875
No 267
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.5e-32 Score=303.22 Aligned_cols=254 Identities=24% Similarity=0.392 Sum_probs=199.6
Q ss_pred HHhhCCceeeecCCccEEEEEeCC-----CceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNN-----SRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
.+|...+.||+|+||.||+|+.+. ..+.||+|.+.... ..+.+|++++++++||||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 345667889999999999999653 34679999885433 35888999999999999999999999989999
Q ss_pred EEEeccCCCCHHHhhccCCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEec
Q 001226 904 IVTEYMPGGTLFNVLHQNEPR------LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDF 977 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~Df 977 (1119)
+||||+++|+|.+++...... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999865522 1489999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccc
Q 001226 978 GMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQEN 1056 (1119)
Q Consensus 978 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1056 (1119)
|++....... ........++..|+|||...+..++.++||||+|+++||+++ |..||..... ..... ...
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--~~~~~---~~~--- 232 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--EEVLN---RLQ--- 232 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--HHHHH---HHH---
Confidence 9987543221 222233456778999999888888999999999999999998 7888853211 11111 000
Q ss_pred ccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1057 HECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
...... ......+..+.+++.+|++.+|++||++.|++++|.+
T Consensus 233 -------~~~~~~--~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 233 -------AGKLEL--PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -------cCCcCC--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 000000 0011223478899999999999999999999998864
No 268
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.4e-32 Score=300.09 Aligned_cols=246 Identities=25% Similarity=0.375 Sum_probs=197.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeec-CCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTK-DEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV~e~ 908 (1119)
|+..+.||+|++|.||++.++.+++.||+|++... ...+.+|+.++++++|+|++++++.+.. +...++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 56678999999999999999988999999988432 2357789999999999999999998764 4467899999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++..... ..+++.++..++.+++.|++++|+. +++||||||+||+++.++.++++|||++.......
T Consensus 82 ~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 82 CEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred cCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 999999999986432 3489999999999999999999999 99999999999999999999999999987664321
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.......+++.|+|||...+..++.++||||+|+++|||++|+.||..... ..... ... .....
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~-~~~---------~~~~~ 220 (257)
T cd08223 157 -DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVY-RII---------EGKLP 220 (257)
T ss_pred -CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHH-HHH---------hcCCC
Confidence 122344678999999999988999999999999999999999999864211 00000 000 00000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+...+..+.+++.+|++.+|++||++.+++++
T Consensus 221 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 ---PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0112234568899999999999999999999875
No 269
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-32 Score=306.15 Aligned_cols=250 Identities=22% Similarity=0.368 Sum_probs=197.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|.++.. ...+.+|+.++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 455668899999999999999988999999987542 235778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++........+++..+..++.|+++|+.|||+.+ +++||||||+||+++.++.++++|||.+......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 156 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--- 156 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence 99999999876533335899999999999999999999642 8999999999999999999999999998765332
Q ss_pred CcccccccCCCcccccccCCC------CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYST------RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
......+++.|+|||.+.+. .++.++|+||+||++|||++|+.||..... ... +... ....
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~--~~~~--------~~~~ 223 (286)
T cd06622 157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--ANI--FAQL--------SAIV 223 (286)
T ss_pred -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--hhH--HHHH--------HHHh
Confidence 12234578899999987543 357899999999999999999999864211 000 0000 0000
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
+.... ..+.....++.+++.+|++.+|++||++++++++
T Consensus 224 ~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 224 DGDPP---TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred hcCCC---CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 10000 0111245577899999999999999999999986
No 270
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.5e-32 Score=305.82 Aligned_cols=248 Identities=24% Similarity=0.323 Sum_probs=198.0
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+|+..+.||+|+||.||+|.+..++..||+|+++.. ...+.+|+.+++.++||||+++++++..+...++||||++
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCD 85 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccC
Confidence 466678899999999999999888999999998543 2357789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++...+. .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||.+....... .
T Consensus 86 ~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--~ 158 (280)
T cd06611 86 GGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--Q 158 (280)
T ss_pred CCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc--c
Confidence 9999999876543 489999999999999999999999 99999999999999999999999999887553321 1
Q ss_pred cccccccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 991 TRSAIVGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
......+++.|+|||.+. ...++.++|+||+|+++|||++|+.||...... .......... .+
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~--------~~ 226 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVLLKILKSE--------PP 226 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHHHHHhcCC--------CC
Confidence 223456889999999764 345678999999999999999999998643111 0000000000 00
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+ ..+...+..+.+++.+||+.+|++||++++++++
T Consensus 227 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 TL----DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred Cc----CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00 0111223467899999999999999999999887
No 271
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.9e-32 Score=306.07 Aligned_cols=262 Identities=21% Similarity=0.235 Sum_probs=197.1
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|+..+.||+|+||.||+|.++.+++.||+|++.... ..+.+|+.+++.++|||++++++++..+...++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 4566688999999999999999889999999874321 3467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++++.+..+..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||++........
T Consensus 82 ~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 82 CDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred cCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99988888766543 489999999999999999999998 999999999999999999999999999987654221
Q ss_pred CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhc---c---cccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQ---E---NHECIC 1061 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~---~~~~~~ 1061 (1119)
......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+. .......... . ......
T Consensus 156 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 156 --DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred --cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHhhhccccc
Confidence 1223457889999998765 5678999999999999999999999964322111 0000000000 0 000000
Q ss_pred cc----cccccCCCch---HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1062 FL----DREISFWDSD---DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~----~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
++ .+........ ....+..+.+++.+||+.+|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00 0000000000 01224568899999999999999999999864
No 272
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.4e-32 Score=300.18 Aligned_cols=244 Identities=27% Similarity=0.434 Sum_probs=197.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc---------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
|+..+.||+|+||.||+|....+++.|++|.+... ...+.+|+.+++.++||||+++++++.++...++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 56678899999999999999888999999987432 235778999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+......
T Consensus 82 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 82 ELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999997654 378899999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCCcccccccCCCcccccccCCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTR-LTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
. ......++..|+|||...... ++.++|+||+|+++|+|++|+.||..... .... .........
T Consensus 156 ~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~--~~~~~~~~~------ 220 (258)
T cd06632 156 S---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAV--FKIGRSKEL------ 220 (258)
T ss_pred c---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHH--HHHHhcccC------
Confidence 2 223456888999999887666 89999999999999999999999864321 0000 000000000
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ..+......+.+++.+||+.+|++||++++++++
T Consensus 221 --~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 221 --P---PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred --C---CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0 0011123567889999999999999999999864
No 273
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.8e-33 Score=303.99 Aligned_cols=237 Identities=21% Similarity=0.374 Sum_probs=185.7
Q ss_pred ceeeecCCccEEEEEeCCCce-------EEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 840 RIIGKGKHGTVYRTLSNNSRK-------HWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~-------~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+.||+|+||.||+|..+..+. +||+|.+... .+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999998765443 4888887543 24577899999999999999999999998899999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCc--------eEEEecccc
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELE--------PKIGDFGMS 980 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--------vkl~DfGla 980 (1119)
+++|+|.++++..+. .+++..+..++.||+.|++|||+. +|+||||||+||+++.++. ++++|||.+
T Consensus 81 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 81 VKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred CCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 999999999987653 478999999999999999999999 9999999999999987765 699999988
Q ss_pred ccccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCC-CCCCCCCCCCCceeehhhhhhccccc
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRK-MPVDPSFGEDTDIVTWTRWKLQENHE 1058 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1119)
..... .....++..|+|||++.+ ..++.++||||+||++|||++|. .||...... . ...
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-~----~~~-------- 216 (258)
T cd05078 156 ITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-K----KLQ-------- 216 (258)
T ss_pred cccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-H----HHH--------
Confidence 65432 223457889999998876 45789999999999999999985 454321100 0 000
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
........ +.....++.+++.+||+.+|++|||++++++.|+
T Consensus 217 ---~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 217 ---FYEDRHQL----PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---HHHccccC----CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00000000 0111246789999999999999999999999863
No 274
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-32 Score=305.46 Aligned_cols=257 Identities=23% Similarity=0.283 Sum_probs=200.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
+|+..+.||+|+||+||++.+..+++.||+|++... ...+.+|+.+++.++||||+++++++......++||||+
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFM 85 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecC
Confidence 455668899999999999999988999999987432 245778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++...+ .+++..+..++.+++.|+.|||+.+ +++||||+|+||+++.++.++++|||++......
T Consensus 86 ~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--- 157 (284)
T cd06620 86 DCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--- 157 (284)
T ss_pred CCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh---
Confidence 9999999987654 4889999999999999999999742 8999999999999999999999999998654321
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......++..|+|||++.+..++.++|+||+||++||+++|+.||................. .............
T Consensus 158 -~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 232 (284)
T cd06620 158 -IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGIL----DLLQQIVQEPPPR 232 (284)
T ss_pred -ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHH----HHHHHHhhccCCC
Confidence 11234689999999998888899999999999999999999999975432211000000000 0000000000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
. .....+..+.+++.+|++.||++||+++|++++.
T Consensus 233 ~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 233 L--PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred C--CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0 0112345688999999999999999999999874
No 275
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.6e-32 Score=299.59 Aligned_cols=250 Identities=24% Similarity=0.322 Sum_probs=200.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+|+..+.+|+|+||.||+|.+..+++.+|+|++... ...+.+|+.+++.++||||+++++++.+++..+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 456678899999999999999888899999988543 3457889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||.+....... .
T Consensus 84 ~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 156 (262)
T cd06613 84 GGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--A 156 (262)
T ss_pred CCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh--h
Confidence 999999987652 2488999999999999999999998 99999999999999999999999999987654321 1
Q ss_pred cccccccCCCcccccccCCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 991 TRSAIVGSLGYIAPENAYST---RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
......++..|+|||...+. .++.++||||+||++|||++|+.||........ ... ... . .+.+.
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~---~~~---~----~~~~~- 224 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFL---ISK---S----NFPPP- 224 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHH---HHh---c----cCCCc-
Confidence 22334678899999988766 788999999999999999999999864321100 000 000 0 00000
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
........+..+.+++.+||+.+|++|||+++|+.+
T Consensus 225 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 225 --KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred --cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 001123345678999999999999999999999864
No 276
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.2e-32 Score=300.12 Aligned_cols=247 Identities=22% Similarity=0.369 Sum_probs=199.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|+..+.||+|+||.||++....+++.||+|.+.. ...++.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 35667899999999999999998899999998742 223578899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++..... ..+++..+.+++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~- 155 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV- 155 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-
Confidence 999999999876432 2478899999999999999999998 99999999999999999999999999987654321
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.......+++.|+|||+..+..++.++|+||+||++|||++|+.||..... . ...... ......
T Consensus 156 -~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--~---~~~~~~----------~~~~~~ 219 (256)
T cd08218 156 -ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--K---NLVLKI----------IRGSYP 219 (256)
T ss_pred -hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--H---HHHHHH----------hcCCCC
Confidence 112234578899999999888899999999999999999999999863210 0 000000 000000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+...+.++.+++.+||+.+|++||++++|+++
T Consensus 220 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 220 ---PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ---CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0112234568899999999999999999999975
No 277
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.8e-32 Score=304.70 Aligned_cols=260 Identities=22% Similarity=0.255 Sum_probs=198.0
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.++++++|||++++++++..+...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 56678899999999999999988999999988533 245788999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
+++|.+++.... ..+++..+..++.|+++|++|||+. +++|+||||+||+++.++.++++|||.+........
T Consensus 82 -~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 82 -PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred -CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 999999987654 2589999999999999999999999 999999999999999999999999999987654321
Q ss_pred CcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehh---------hhhhcccccc
Q 001226 990 STRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWT---------RWKLQENHEC 1059 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~---------~~~~~~~~~~ 1059 (1119)
.......++..|+|||.+.+. .++.++||||+|+++|||++|..||...... ....... .|.. ....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~ 231 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPG--LTSL 231 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhh--ccCc
Confidence 222345688999999987654 4689999999999999999997777532110 0000000 0000 0000
Q ss_pred cccccccccCCC-----chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1060 ICFLDREISFWD-----SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1060 ~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
............ .........+.+++.+|++.+|++||+++++++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000000 0001224678999999999999999999999875
No 278
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.5e-32 Score=305.82 Aligned_cols=265 Identities=21% Similarity=0.245 Sum_probs=196.4
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+.+|+..+.||+|+||.||+|.++.+++.||+|.+... ...+.+|+.+++.++||||+++++++.++...++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 35677778999999999999999988999999988532 2346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++ +|.+++..... .+++..+..++.|+++|+.|||+. +++||||||+||+++.++.+|++|||.++......
T Consensus 84 ~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 84 YLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred cCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 9974 99999876543 588999999999999999999999 99999999999999999999999999987543211
Q ss_pred CCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceee-hhhhhhccc------ccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVT-WTRWKLQEN------HEC 1059 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~------~~~ 1059 (1119)
.......++..|+|||...+ ..++.++||||+|+++|||++|+.||............ +........ ...
T Consensus 158 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred --ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 11222346889999998765 45789999999999999999999998643211000000 000000000 000
Q ss_pred cccccccccCCCch-------HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1060 ICFLDREISFWDSD-------DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1060 ~~~~~~~~~~~~~~-------~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.............. .......+.+++.+|++.+|++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000000000 00112567899999999999999999998864
No 279
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7e-33 Score=280.48 Aligned_cols=253 Identities=22% Similarity=0.313 Sum_probs=201.6
Q ss_pred HHhhCC-ceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhc-CCCCEEEEeeeeec----CCceEEEEe
Q 001226 834 IRATEG-RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLV-RHRNILRIVGSCTK----DEHGFIVTE 907 (1119)
Q Consensus 834 ~~~~~~-~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~~lV~e 907 (1119)
++|+.. ++||-|-.|.|..+.++.+++++|+|++.... ...+|++.--+. .|||||.++++|.. .....+|||
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE 139 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVME 139 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeee
Confidence 344433 78999999999999999999999999986433 335677664444 59999999999864 356689999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC---CceEEEecccccccc
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE---LEPKIGDFGMSKLIS 984 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~vkl~DfGla~~~~ 984 (1119)
.|+||.|+..+.+++. ..+++.++..|+.||..|+.|||+. .|.||||||+|+|.+.. ..+|++|||+|+...
T Consensus 140 ~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 140 CMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred cccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccC
Confidence 9999999999998774 4699999999999999999999999 99999999999999754 468999999998654
Q ss_pred CCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
. .......+-|+.|.|||++...+|+...|+||+||++|-|++|..||+...+. .+..-.+.+ +..
T Consensus 216 ~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--aispgMk~r---------I~~ 281 (400)
T KOG0604|consen 216 E---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISPGMKRR---------IRT 281 (400)
T ss_pred C---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--cCChhHHhH---------hhc
Confidence 3 23334456799999999999999999999999999999999999999876442 111111111 111
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+.+...+....+.+..++++.++..+|++|.|+.+++.+
T Consensus 282 gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 282 GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 22233334446677888999999999999999999999875
No 280
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.6e-32 Score=300.46 Aligned_cols=251 Identities=24% Similarity=0.306 Sum_probs=184.8
Q ss_pred ceeeecCCccEEEEEeCCC--ceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNNS--RKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~--~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+.||+|+||.||+|..... ...+++|.++.. ...+.+|+..++.++||||+++++.+.+....|+||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3599999999999975432 345677766432 245788999999999999999999999999999999999999
Q ss_pred CHHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 913 TLFNVLHQNEP-RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 913 sL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
+|.++++.... ....++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||++...........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999986532 22466777889999999999999998 999999999999999999999999999864322221122
Q ss_pred ccccccCCCcccccccCC-------CCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 992 RSAIVGSLGYIAPENAYS-------TRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
.....++..|+|||+... ..++.++|||||||++|||++ |..||..... .. .+..... .......
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~--~~~~~~~---~~~~~~~ 230 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--RE--VLNHVIK---DQQVKLF 230 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--HH--HHHHHHh---hcccccC
Confidence 234567889999998643 345789999999999999997 5667653211 00 0000000 0001111
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
++.+. ......+.+++..|| .+|++||++++|++.|.
T Consensus 231 ~~~~~------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLE------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccC------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11111 112346678999999 67999999999998874
No 281
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.5e-32 Score=300.80 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=194.7
Q ss_pred hCCceeeecCCccEEEEEeCC---CceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC------c
Q 001226 837 TEGRIIGKGKHGTVYRTLSNN---SRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE------H 901 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 901 (1119)
+..+.||+|+||.||+|..+. +++.||||++... .+++.+|+.++++++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 446789999999999998643 5789999988643 234778999999999999999999886532 2
Q ss_pred eEEEEeccCCCCHHHhhccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 902 GFIVTEYMPGGTLFNVLHQNE---PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
.++++||+++|+|.+++.... ....+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+|++|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECccc
Confidence 378999999999998875321 123478899999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccc
Q 001226 979 MSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENH 1057 (1119)
Q Consensus 979 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1119)
.++...............+++.|++||......++.++||||+||++|||++ |+.||..... ... ....... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~---~~~~~~~-~ 232 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEI---YNYLIKG-N 232 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHH---HHHHHcC-C
Confidence 9986644332222333456678999999988889999999999999999998 8888753211 110 0100000 0
Q ss_pred cccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1058 ECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
... .....+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 233 --------~~~----~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 --------RLK----QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --------cCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 0011234788999999999999999999999999876
No 282
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-32 Score=308.02 Aligned_cols=242 Identities=24% Similarity=0.338 Sum_probs=195.6
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
...||+|+||.||++.+..++..||||++... ...+.+|+..++.++||||+++++.+..++..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 46799999999999999888999999987532 23577899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||++....... .....
T Consensus 107 ~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~ 177 (292)
T cd06658 107 TDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKS 177 (292)
T ss_pred HHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCce
Confidence 9988543 378899999999999999999999 99999999999999999999999999987554322 12233
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
..++..|+|||...+..++.++||||+|+++|||++|+.||...... ...... ...+..... ..
T Consensus 178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~--------~~~~~~~~~----~~ 241 (292)
T cd06658 178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL----QAMRRI--------RDNLPPRVK----DS 241 (292)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH--------HhcCCCccc----cc
Confidence 56889999999998888999999999999999999999998642110 000000 000111111 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...+..+.+++.+|++.+|.+|||++|++++
T Consensus 242 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 242 HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1234467899999999999999999999986
No 283
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.4e-32 Score=298.23 Aligned_cols=246 Identities=25% Similarity=0.399 Sum_probs=196.3
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc--cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS--ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+.+|+..+.||+|+||.||++.. +++.||+|.++.. ...+.+|+.+++.++|||++++++++..+ ..++||||++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 46788889999999999999864 4678999988643 34678899999999999999999998765 4689999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++..... ..+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||.+......
T Consensus 82 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---- 153 (254)
T cd05083 82 KGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---- 153 (254)
T ss_pred CCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence 9999999986542 3478999999999999999999998 9999999999999999999999999998754321
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......+..|+|||.+.+..++.++|+||+||++|||++ |+.||...... ...... ......
T Consensus 154 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~-----------~~~~~~ 216 (254)
T cd05083 154 -VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----EVKECV-----------EKGYRM 216 (254)
T ss_pred -CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHHH-----------hCCCCC
Confidence 112234568999999988889999999999999999997 99998643111 111100 000000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
. .....+..+.+++.+||+.+|++||+++++++.|++
T Consensus 217 ~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 217 E--PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred C--CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 011234567899999999999999999999998864
No 284
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.98 E-value=6.4e-32 Score=296.74 Aligned_cols=247 Identities=31% Similarity=0.526 Sum_probs=197.9
Q ss_pred hCCceeeecCCccEEEEEeCCCc----eEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSR----KHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~----~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+..+.||+|+||.||++.+...+ ..||+|+++... ..+..|+..++.++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 34578999999999999998766 889999986433 367889999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++++|.+++...... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+.......
T Consensus 82 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 82 YMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred ccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 99999999999865432 289999999999999999999999 99999999999999999999999999998765532
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
..... ...+++.|+|||...+..++.++||||+|+++|||++ |+.||..... .... .... . ..
T Consensus 158 ~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~---~~~~-~---------~~ 221 (258)
T smart00219 158 YYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVL---EYLK-K---------GY 221 (258)
T ss_pred ccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHH---HHHh-c---------CC
Confidence 22211 2337789999999888889999999999999999998 7888754211 0000 0000 0 00
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
.. ......+.++.+++.+|++.+|++|||++|+++.|
T Consensus 222 -~~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 -RL--PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CC--CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00 00111355788999999999999999999998764
No 285
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.98 E-value=5.1e-32 Score=298.93 Aligned_cols=247 Identities=26% Similarity=0.354 Sum_probs=193.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---------cccHHHHHHHHhhcCCCCEEEEeeeeecC--CceE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---------ETNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGF 903 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 903 (1119)
.|+.++.||+|+||.||+|.+..+++.||+|++... ...+.+|+.++++++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 356678999999999999999999999999987421 12467799999999999999999988764 4578
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||+++++|.+++.... .+++..+.+++.|++.|++|||+. +++|+||||+||+++.++.++++|||.++..
T Consensus 83 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 83 IFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 9999999999999987654 378888999999999999999999 9999999999999999999999999998765
Q ss_pred cCCCCC-CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 984 SDSHSS-STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 984 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
...... .......++..|+|||...+..++.++|||||||++|||++|+.||..... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~~~---------- 222 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAAIFKIA---------- 222 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHHHHHHh----------
Confidence 321111 112234588899999998888899999999999999999999999863210 00000000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+. ....+......+.+++.+|+. +|++||+++|++++
T Consensus 223 ~~~~---~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 223 TQPT---NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred cCCC---CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0000 001122344567889999994 99999999999875
No 286
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.4e-33 Score=285.79 Aligned_cols=240 Identities=25% Similarity=0.362 Sum_probs=197.8
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
.+++|+|.||.|-+++.+.+++.||+|++++.. .....|-++++..+||.+..+...|...++.|+||||+.|
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanG 252 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANG 252 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccC
Confidence 478999999999999999999999999986542 2345688999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|.|+-.+.+.+ .+++..++.+...|+.|+.|||+. +||.||+|.+|.|+|.+|++||+|||+++.- ......
T Consensus 253 GeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~--I~~g~t 324 (516)
T KOG0690|consen 253 GELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE--IKYGDT 324 (516)
T ss_pred ceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc--ccccce
Confidence 99988877654 588889999999999999999999 9999999999999999999999999998742 234456
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
....+|||.|+|||++....|+.++|.|.+|||+|||++|+.||+....+ .+. .-++-..+++
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--kLF-------------eLIl~ed~kF-- 387 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--KLF-------------ELILMEDLKF-- 387 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--HHH-------------HHHHhhhccC--
Confidence 67889999999999999999999999999999999999999999753111 110 0111122221
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
+...+.+...++...+..||.+|. .++||.++
T Consensus 388 --Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 388 --PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred --CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 222344667889999999999997 56666654
No 287
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.98 E-value=3.1e-32 Score=298.94 Aligned_cols=245 Identities=28% Similarity=0.396 Sum_probs=197.9
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||+|....+++.||+|.+... ...+.+|+.++++++|||++++++.+..++..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 55668899999999999999999999999987532 235778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-ceEEEeccccccccCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-EPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~vkl~DfGla~~~~~~~~ 988 (1119)
++++|.+++..... ..+++..+.+++.++++|++|||++ +++|+||+|+||+++.++ .+|++|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 82 PGGTLAEYIQKRCN-SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999986542 3478999999999999999999999 999999999999998654 57999999998764422
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ......... ....
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~~----------~~~~ 219 (256)
T cd08220 157 --KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIMS----------GTFA 219 (256)
T ss_pred --cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHHh----------cCCC
Confidence 22234678899999999888899999999999999999999999864311 111111100 0000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+..+.+++.+||+.+|++|||++|++++
T Consensus 220 ---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 ---PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ---CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0011134567899999999999999999999875
No 288
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.98 E-value=5.1e-32 Score=303.23 Aligned_cols=247 Identities=26% Similarity=0.371 Sum_probs=200.0
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
.+|...+.||+|+||.||++....+++.||+|.+... .+.+.+|+.+++.++||||+++++++..++..|+|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 4667778999999999999999888999999988532 245778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++.+. .+++..+..++.|++.|+.|||+. +++|||++|+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~- 170 (293)
T cd06647 99 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (293)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-
Confidence 999999998754 378889999999999999999999 999999999999999999999999998875543221
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
......+++.|+|||......++.++|||||||++||+++|+.||....... ........ +. ..
T Consensus 171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~-~~~~~~~~-------------~~-~~ 234 (293)
T cd06647 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-ALYLIATN-------------GT-PE 234 (293)
T ss_pred -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh-heeehhcC-------------CC-CC
Confidence 2233468889999999888889999999999999999999999996432111 11110000 00 00
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ......+..+.+++.+||+.+|++||++++++.+
T Consensus 235 ~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 235 L-QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred C-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0111234467899999999999999999999987
No 289
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.6e-33 Score=306.97 Aligned_cols=243 Identities=22% Similarity=0.360 Sum_probs=196.9
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLF 915 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 915 (1119)
-.||.|+||.||+|..+.++...|-|++... -+++..||.++..+.||+||++++.|..++..+++.|||+||-..
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD 117 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD 117 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence 4689999999999999998888889988532 356888999999999999999999999999999999999999998
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCccccc
Q 001226 916 NVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAI 995 (1119)
Q Consensus 916 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~ 995 (1119)
.++-.-+. .+++.++..+++|++.|+.|||++ .|||||+|+.|||++-+|.++++|||.+..... ....+..+
T Consensus 118 aimlEL~r--~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~qkRDsF 190 (1187)
T KOG0579|consen 118 AIMLELGR--VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQKRDSF 190 (1187)
T ss_pred HHHHHhcc--ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh--HHhhhccc
Confidence 88876553 599999999999999999999999 999999999999999999999999999865432 22345678
Q ss_pred ccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 996 VGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 996 ~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
.|||+|||||+.. ..+|++++||||||+++.||..+.+|...... .....+.. . ......+.+
T Consensus 191 IGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp----MRVllKia--K-SePPTLlqP----- 258 (1187)
T KOG0579|consen 191 IGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP----MRVLLKIA--K-SEPPTLLQP----- 258 (1187)
T ss_pred cCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch----HHHHHHHh--h-cCCCcccCc-----
Confidence 9999999999654 56899999999999999999999988653211 00011100 0 001111111
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..-+..+.+++.+|+..+|+.||+++++++|
T Consensus 259 ----S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 259 ----SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred ----chhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 1224467899999999999999999999876
No 290
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=4.9e-33 Score=277.84 Aligned_cols=244 Identities=23% Similarity=0.315 Sum_probs=189.4
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccccc--c---cHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE--T---NFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~---~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
...+|+|..|+||+++.+.++..+|||.+.+.. + .+...+.++..-+ .|+||+.+|+|..+...++.||.| ..
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~ 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-ST 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HH
Confidence 356999999999999999999999999996532 2 2333444444333 799999999999999999999998 44
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
.....+++-.. ++++.-+-++...++.||.||.++| +|+|||+||+|||+|+.|.+|++|||.+..+.++ ...
T Consensus 176 C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS---kAh 248 (391)
T KOG0983|consen 176 CAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS---KAH 248 (391)
T ss_pred HHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc---ccc
Confidence 55666665443 4888888899999999999999887 9999999999999999999999999999877653 344
Q ss_pred cccccCCCcccccccCC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 993 SAIVGSLGYIAPENAYS---TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
+...|.+.|||||.+.. ..|+-++||||||+.++|+.||+.||.... .+.....+.-... .+.++.
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~---tdFe~ltkvln~e--------PP~L~~ 317 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK---TDFEVLTKVLNEE--------PPLLPG 317 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC---ccHHHHHHHHhcC--------CCCCCc
Confidence 55678999999997754 468899999999999999999999997642 2222211111111 111211
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ...+..+.+++..|++.|+.+||...++++|
T Consensus 318 ~----~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 318 H----MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred c----cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 1 1135577899999999999999999999875
No 291
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.98 E-value=2.2e-32 Score=306.63 Aligned_cols=242 Identities=24% Similarity=0.361 Sum_probs=194.7
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccc----ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR----SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
...||+|+||.||+|.+..+++.||+|+++. ....+.+|+..++.++|||++++++++..++..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 4579999999999999988899999999843 223577899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++....... .....
T Consensus 106 ~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~ 176 (297)
T cd06659 106 TDIVSQT----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKS 176 (297)
T ss_pred HHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc--ccccc
Confidence 9887543 378999999999999999999999 99999999999999999999999999987554321 12233
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
..++..|+|||++.+..++.++||||+||++|||++|+.||...... . ...... .. . .... ...
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~--~~~~~~--~~-~-----~~~~----~~~ 240 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--Q--AMKRLR--DS-P-----PPKL----KNA 240 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--H--HHHHHh--cc-C-----CCCc----ccc
Confidence 56889999999998888999999999999999999999998642110 0 000000 00 0 0000 001
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...+..+.+++.+|++.+|++||++++++++
T Consensus 241 ~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 241 HKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1123467899999999999999999999985
No 292
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.98 E-value=1.2e-31 Score=299.66 Aligned_cols=256 Identities=23% Similarity=0.321 Sum_probs=197.6
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecC--CceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e~ 908 (1119)
|...+.||.|++|.||++.+..+++.||+|.+... ..++.+|+++++.++||||+++++++.+. +..++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 34457899999999999999988999999988643 24578899999999999999999988653 467999999
Q ss_pred cCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 909 MPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
+++++|.+++.... ....+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 99999998876422 223578889999999999999999999 99999999999999999999999999987553321
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
.....++..|+|||...+..++.++||||+||++|||++|+.||...............+..... . ..+
T Consensus 160 ----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~-----~~~ 228 (287)
T cd06621 160 ----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP--N-----PEL 228 (287)
T ss_pred ----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC--c-----hhh
Confidence 12345788999999998889999999999999999999999999754221111111111111100 0 000
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..........+..+.+++.+||+.+|++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 229 KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00001111234568899999999999999999999984
No 293
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.98 E-value=4e-32 Score=303.92 Aligned_cols=241 Identities=25% Similarity=0.363 Sum_probs=198.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||++.+..+++.||+|++... ...+.+|++++++++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 356678999999999999999988999999988532 2457789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||++......
T Consensus 82 ~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 82 YVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred cCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999998764 488999999999999999999998 9999999999999999999999999998866442
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
.....+++.|+|||...+..++.++||||+|+++|+|++|+.||..... .... ... .....
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~-~~~----------~~~~~ 215 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP----IQIY-EKI----------LEGKV 215 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH----HHHH-HHH----------hcCCc
Confidence 2334688999999998888889999999999999999999999864321 0000 000 00000
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
. .+...+..+.+++.+||+.+|++|| +++|++++
T Consensus 216 ~----~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 216 R----FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred c----CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 0 0111245678999999999999999 88888765
No 294
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.98 E-value=6e-32 Score=303.92 Aligned_cols=261 Identities=22% Similarity=0.265 Sum_probs=195.7
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc---------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
|+..+.||+|+||.||+|.+..+++.||+|+++... ..+..|+.++++++|+||+++++++.++...++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 455678999999999999999889999999985432 23567999999999999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+ +++|.+++.... ..+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||+++.....
T Consensus 82 e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 82 EFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred ccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 999 899999997654 2489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhh-------hhccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRW-------KLQENHE 1058 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~ 1058 (1119)
.. ......+++.|+|||.+.+ ..++.++||||+||++|||++|..||......+ ........ .......
T Consensus 156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T cd07841 156 NR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGTPTEENWPGVTS 232 (298)
T ss_pred Cc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCCCchhhhhhccc
Confidence 21 1223356788999998754 457899999999999999999977765322110 00000000 0000000
Q ss_pred ccccccccccCC---CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 CICFLDREISFW---DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
............ .......+..+.+++.+||+.+|++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000 00011224578899999999999999999999986
No 295
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.98 E-value=7.7e-32 Score=297.31 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=198.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|...+.||+|+||.||+|....+++.||+|+++.. ...+..|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 356678999999999999999888999999998533 23577899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++.... .+++..+..++.++++|+.|||+. +++|+||+|+||++++++.+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999999998654 378889999999999999999999 999999999999999999999999999887654322
Q ss_pred CCc--ccccccCCCcccccccCCCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 989 SST--RSAIVGSLGYIAPENAYSTR---LTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 989 ~~~--~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
... .....+++.|+|||.+.+.. ++.++||||||+++||+++|+.||........ ... ... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~----~~~-~~~------~~~ 223 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ----IMF-HVG------AGH 223 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH----HHH-HHh------cCC
Confidence 111 12346788999999887765 88999999999999999999999964321100 000 000 000
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+.++. ....+..+.+++.+|++.+|++||+++|++.+
T Consensus 224 ~~~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 224 KPPIPD----SLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCCCCc----ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 011111 11124466799999999999999999998764
No 296
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.98 E-value=2.3e-32 Score=301.69 Aligned_cols=248 Identities=27% Similarity=0.381 Sum_probs=198.7
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+..+.||+|+||.||+|.++.+++.||+|.+... ..++.+|+..+++++||||+++++++..+...++|+||+++
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDG 83 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCC
Confidence 3446799999999999999988999999988543 23577899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHY-DCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
++|.+++.... ..+++..+..++.|++.|++|+|+ . +++|+||||+||+++.++.++++|||.+........
T Consensus 84 ~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 156 (265)
T cd06605 84 GSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA-- 156 (265)
T ss_pred CcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--
Confidence 99999998763 258889999999999999999999 7 999999999999999999999999999876533211
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
....++..|+|||...+..++.++||||+|+++|+|++|+.||................. ........
T Consensus 157 --~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 224 (265)
T cd06605 157 --KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI----------VNEPPPRL 224 (265)
T ss_pred --hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHH----------hcCCCCCC
Confidence 115678899999999888999999999999999999999999865422111111111100 00000000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.....+..+.+++.+||..+|++|||+.+++++
T Consensus 225 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 225 --PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred --ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 011145568899999999999999999999875
No 297
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.98 E-value=5.4e-32 Score=305.14 Aligned_cols=251 Identities=25% Similarity=0.316 Sum_probs=195.2
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|...+.||+|+||.||++.+..+++.||+|.+... ...+.+|+.+++.++||||+++++.+..++..++||||
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY 82 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence 44568899999999999999999999999988532 23466899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++...+ .+++..+..++.|+++|++|+|+. +++||||||+||+++.++.++++|||.++.......
T Consensus 83 ~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 83 VEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 99999999997654 488999999999999999999998 999999999999999999999999999864211000
Q ss_pred -------------CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcc
Q 001226 989 -------------SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQE 1055 (1119)
Q Consensus 989 -------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1055 (1119)
........++..|+|||.+.+..++.++|+|||||++||+++|+.||...... .+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-----~~~~~~~-- 229 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-----ELFGQVI-- 229 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHH--
Confidence 00111245788999999998888999999999999999999999998642110 0000000
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 001226 1056 NHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIK 1108 (1119)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~ 1108 (1119)
...... .......+..+.+++.+||+.+|++||++.++.+.++.
T Consensus 230 --------~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 230 --------SDDIEW-PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred --------hcccCC-CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 000000 00111234567899999999999999996555554443
No 298
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-33 Score=335.35 Aligned_cols=245 Identities=27% Similarity=0.391 Sum_probs=200.2
Q ss_pred CCceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 838 EGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
.+..||.|.||.||-|...++|+..|+|.++- .-..+.+|..++..++|||+|+++|+-.+++..+|.||||++
T Consensus 1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence 45789999999999999999999999997742 234578899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC--C
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS--S 989 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~--~ 989 (1119)
|+|.+.+...+ ..++.-...+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|..+..... .
T Consensus 1319 GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1319 GSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred CcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 99999998764 366666777889999999999999 999999999999999999999999999998765421 1
Q ss_pred CcccccccCCCcccccccCCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYST---RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
.......||+.|||||++.+. ....++||||+|||+.||+||+.||.....+ |.++.. +..
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---------~aIMy~--V~~----- 1456 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---------WAIMYH--VAA----- 1456 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---------hHHHhH--Hhc-----
Confidence 223456899999999998764 3567999999999999999999998754221 111110 000
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...++.+...+.+-.+++..|++.||.+|+++.|++++
T Consensus 1457 -gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 -GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 01112233466677899999999999999999998876
No 299
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.3e-33 Score=294.91 Aligned_cols=239 Identities=25% Similarity=0.284 Sum_probs=198.0
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecc-------cccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLN-------RSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
+..++||+|+||.||-++.+.+|+.||.|++. +.+....+|-.++.++..+.||.+-.+|...+..++|+..|
T Consensus 188 ~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlM 267 (591)
T KOG0986|consen 188 RVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLM 267 (591)
T ss_pred eeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEee
Confidence 34489999999999999999999999999873 23445678999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
.||+|.-.+...+. ..+++..+..++.+|+.||++||.. +||.||+||+|||+|+.|+|+|+|.|+|..+.+..
T Consensus 268 NGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~-- 341 (591)
T KOG0986|consen 268 NGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK-- 341 (591)
T ss_pred cCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCC--
Confidence 99999988887774 4699999999999999999999999 99999999999999999999999999999886643
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc-
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS- 1068 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1068 (1119)
....++||.+|||||++..+.|+...|.||+||++|||+.|+.||..... .+.+. .+|++..
T Consensus 342 -~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke----Kvk~e------------Evdrr~~~ 404 (591)
T KOG0986|consen 342 -PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE----KVKRE------------EVDRRTLE 404 (591)
T ss_pred -ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh----hhhHH------------HHHHHHhc
Confidence 33445899999999999999999999999999999999999999964311 11110 1111111
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCC
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPS 1098 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 1098 (1119)
.....+..-+.++.++.+..++.||++|.-
T Consensus 405 ~~~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 405 DPEEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred chhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 111112233557788999999999999873
No 300
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.98 E-value=5.8e-32 Score=301.81 Aligned_cols=264 Identities=20% Similarity=0.261 Sum_probs=197.9
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|+..++||+|++|.||+|.+..+++.||||+++.. ...+.+|+.+++.++||||+++++++.+++..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 55668999999999999999999999999988533 2356689999999999999999999999999999999997
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+ +|.+++........+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||++....... .
T Consensus 82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--~ 155 (284)
T cd07836 82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--N 155 (284)
T ss_pred c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--c
Confidence 5 8988887665445689999999999999999999998 99999999999999999999999999987554321 1
Q ss_pred cccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccc-----cccc
Q 001226 991 TRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECI-----CFLD 1064 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 1064 (1119)
......++..|+|||.+.+. .++.++||||+||++|||++|+.||......+.................. ....
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 22334578899999987654 56889999999999999999999986532211000000000000000000 0000
Q ss_pred ccccCCCc-----hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1065 REISFWDS-----DDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1065 ~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
........ .....+..+.+++.+|++.+|++||++++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000000 011234568899999999999999999999864
No 301
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.98 E-value=1.2e-31 Score=297.83 Aligned_cols=243 Identities=29% Similarity=0.438 Sum_probs=197.0
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|+..+.||+|+||.||+|.+..+++.||+|...... ..+.+|+..+++++||||+++++++.++...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 445688999999999999998889999999875322 357789999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++....... .
T Consensus 86 ~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--~ 156 (277)
T cd06641 86 GGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--I 156 (277)
T ss_pred CCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch--h
Confidence 99999998753 378999999999999999999998 99999999999999999999999999987654321 1
Q ss_pred cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCC
Q 001226 991 TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFW 1070 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1119)
......++..|+|||...+..++.++|+||+||++|||++|..||...... ..... .... . .+.
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~-~~~~-~-----~~~---- 220 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFL-IPKN-N-----PPT---- 220 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHH-HhcC-C-----CCC----
Confidence 122346788999999988888899999999999999999999998642110 00000 0000 0 000
Q ss_pred CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1071 DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1071 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.....+..+.+++.+|++.+|++||++++++++
T Consensus 221 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 --LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred --CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111234567899999999999999999999996
No 302
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.98 E-value=3.9e-32 Score=303.56 Aligned_cols=262 Identities=23% Similarity=0.304 Sum_probs=196.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|+..++||+|+||.||+|.+..+++.||+|++... ...+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 355668999999999999999988999999987432 23467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++++++.++..... .+++..+..++.|+++|++|||+. +++|||++|+||++++++.++++|||++.......
T Consensus 82 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 82 VDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred CCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999988776543 389999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhh----------hhcccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRW----------KLQENH 1057 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~----------~~~~~~ 1057 (1119)
.......++..|+|||+..+ ..++.++||||||+++|||++|+.||......+ ........ ......
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCCchhhHHHhccch
Confidence 12223457889999998765 457889999999999999999998885321100 00000000 000000
Q ss_pred cccccccccccCCC---chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1058 ECICFLDREISFWD---SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1058 ~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.......+...... ......+..+.+++.+||+.+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000000000000 0001234578899999999999999999999875
No 303
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.98 E-value=7.2e-32 Score=300.67 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=193.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhc-CCCCEEEEeeeeec------CCceEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLV-RHRNILRIVGSCTK------DEHGFI 904 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~~~~~l 904 (1119)
.|+..+.+|.|+||.||+|.+..+++.||+|+.... ..++..|+.+++++ +||||+++++++.. ....|+
T Consensus 17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 96 (282)
T cd06636 17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWL 96 (282)
T ss_pred hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEE
Confidence 456668899999999999999999999999988543 24577889999888 69999999999853 456799
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|||++|+||+++.++.++++|||++....
T Consensus 97 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~ 172 (282)
T cd06636 97 VMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172 (282)
T ss_pred EEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence 9999999999999876442 3478888999999999999999999 99999999999999999999999999987553
Q ss_pred CCCCCCcccccccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHEC 1059 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1119)
... .......++..|+|||.+. ...++.++||||+||++|||++|+.||......... .. ...
T Consensus 173 ~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-~~-----~~~---- 240 (282)
T cd06636 173 RTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-FL-----IPR---- 240 (282)
T ss_pred ccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-hh-----Hhh----
Confidence 211 1223456889999999875 345788999999999999999999998643211000 00 000
Q ss_pred cccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1060 ICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...... .....+..+.+++.+||+.||.+||++.|++++
T Consensus 241 --~~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 241 --NPPPKL-----KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred --CCCCCC-----cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 000000 011234578899999999999999999999864
No 304
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.98 E-value=1.2e-31 Score=300.27 Aligned_cols=264 Identities=21% Similarity=0.222 Sum_probs=193.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
.+|+..+.||+|+||.||+|.+..+++.||+|++.... ..+.+|+.+++.++|+||+++.+++..++..|+||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 35667789999999999999999889999999885321 2467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++ +++.+++..... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++++|||+++......
T Consensus 85 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 157 (291)
T cd07870 85 MH-TDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPS- 157 (291)
T ss_pred cc-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCC-
Confidence 95 677777655432 477888899999999999999999 99999999999999999999999999987543321
Q ss_pred CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceee-hhhhhhcccc------ccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVT-WTRWKLQENH------ECI 1060 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~------~~~ 1060 (1119)
.......++..|+|||...+ ..++.++||||+||++|||++|+.||............ +......... ...
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 158 -QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred -CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 12233457889999998865 35788999999999999999999999753211000000 0000000000 000
Q ss_pred ccccccccCCC-------chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 CFLDREISFWD-------SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 ~~~~~~~~~~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
........... ......+..+.+++.+|++.||++|||++|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00000000000 0000113467899999999999999999999864
No 305
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.98 E-value=7.3e-32 Score=305.87 Aligned_cols=250 Identities=24% Similarity=0.362 Sum_probs=199.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|.+.... ..+..|+.+++.++||||+++++.+.++...|+|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 3566688999999999999999999999999885432 346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++++|.+++.... ...+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||++.......
T Consensus 82 ~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 82 YCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred ecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999987543 23589999999999999999999999 99999999999999999999999999987553221
Q ss_pred CC---------------------------CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 001226 988 SS---------------------------STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFG 1040 (1119)
Q Consensus 988 ~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~ 1040 (1119)
.. .......|+..|+|||...+..++.++||||+|+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 011234678899999999888899999999999999999999999864321
Q ss_pred CCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCC----HHHHHHH
Q 001226 1041 EDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPS----MREVVGF 1105 (1119)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs----~~ell~~ 1105 (1119)
.. .+. ...+...... .....+..+.+++.+|++.+|++||+ ++|++++
T Consensus 238 ~~----~~~-----------~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 238 DE----TFS-----------NILKKEVTFP--GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HH----HHH-----------HHhcCCccCC--CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 10 000 0111111110 11114567899999999999999999 7777775
No 306
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.98 E-value=1.5e-31 Score=297.36 Aligned_cols=244 Identities=25% Similarity=0.329 Sum_probs=195.7
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcC---CCCEEEEeeeeecCCceEEEEe
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVR---HRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e 907 (1119)
|+..+.||+|+||.||+|.+..+++.||+|.++.. ..++.+|+.+++.++ |||++++++++.++...++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 44557899999999999999888999999987532 235778999999987 9999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++++|.++++.. .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 83 YAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred cCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 99999999998653 488999999999999999999999 99999999999999999999999999988765432
Q ss_pred CCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
.......++..|+|||...++ .++.++|+||+||++|+|++|+.||....... ...... ....+.
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-----~~~~~~-------~~~~~~ 221 (277)
T cd06917 156 --SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR-----AMMLIP-------KSKPPR 221 (277)
T ss_pred --cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh-----hhhccc-------cCCCCC
Confidence 222334688899999987654 46889999999999999999999986431110 000000 000001
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
+.. ...+.++.+++.+||+.+|++||++.|++++
T Consensus 222 ~~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 222 LED-----NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCc-----ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 110 0134567899999999999999999999875
No 307
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.98 E-value=6.5e-32 Score=300.06 Aligned_cols=239 Identities=28% Similarity=0.331 Sum_probs=187.3
Q ss_pred eeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhh---cCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 841 IIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSL---VRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 841 ~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.||+|+||.||++.+..+++.||+|.+.... ..+.+|..+++. .+||+++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999989999999885321 123344444443 369999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++...+ .+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||++.......
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--- 151 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence 999999987654 489999999999999999999999 99999999999999999999999999987554321
Q ss_pred cccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
.....++..|+|||.... ..++.++||||+||++|||++|+.||......... ........ ....
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~--------~~~~--- 217 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLT--------VNVE--- 217 (279)
T ss_pred -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHhhc--------CCcC---
Confidence 123468999999998764 56789999999999999999999999753221111 11110000 0000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
.+...+.++.+++.+|++.||++|| +++|+++|
T Consensus 218 ---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 ---LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ---CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1122345778999999999999999 69999886
No 308
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.98 E-value=9.4e-32 Score=299.90 Aligned_cols=245 Identities=24% Similarity=0.358 Sum_probs=196.6
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+...+.||+|++|.||++.+..+++.||+|+++.. ...+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 33447899999999999999888999999988532 23467899999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+....... ..
T Consensus 101 ~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~~ 171 (285)
T cd06648 101 GALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--PR 171 (285)
T ss_pred CCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC--cc
Confidence 9999998762 378899999999999999999999 99999999999999999999999999887554321 12
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....+++.|+|||...+..++.++||||+||++|||++|+.||..... ........ .. ..+...
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~----~~~~~~~~-~~-------~~~~~~--- 236 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP----LQAMKRIR-DN-------LPPKLK--- 236 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH----HHHHHHHH-hc-------CCCCCc---
Confidence 2334688999999999888899999999999999999999999864211 00000000 00 000000
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.....+..+.+++.+||+.+|++||++++++++
T Consensus 237 -~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 237 -NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred -ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 111134578899999999999999999999974
No 309
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.98 E-value=6.9e-32 Score=301.00 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=190.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHH-HhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRT-LSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||+|.+..+++.||+|+++... .++..|+.. ++..+||||+++++++..++..++||||+
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (283)
T cd06617 3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM 82 (283)
T ss_pred ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence 455688999999999999999999999999886432 234445554 56678999999999999999999999999
Q ss_pred CCCCHHHhhccC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 910 PGGTLFNVLHQN-EPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 910 ~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+ |+|.+++... .....+++..+..++.|++.|++|||+++ +++||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 158 (283)
T cd06617 83 D-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV- 158 (283)
T ss_pred c-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccccc-
Confidence 6 6888877653 22345899999999999999999999853 89999999999999999999999999988654321
Q ss_pred CCcccccccCCCcccccccCC----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYS----TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||........ ..... . ....
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~-~-------~~~~ 225 (283)
T cd06617 159 --AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ---QLKQV-V-------EEPS 225 (283)
T ss_pred --ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH---HHHHH-H-------hcCC
Confidence 1223467889999998754 4568899999999999999999999863211100 00000 0 0000
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+. ....+.++.+++.+||+.+|++||++++++++
T Consensus 226 ~~~~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 226 PQLP-----AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCC-----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0110 11234568899999999999999999999874
No 310
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=1.1e-31 Score=300.86 Aligned_cols=265 Identities=22% Similarity=0.243 Sum_probs=196.9
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecC--CceEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGFI 904 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 904 (1119)
+.+|+..+.||+|+||.||+|.+..+++.||+|.++... ..+.+|+.++++++||||+++++++..+ ...|+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 456777789999999999999999889999999885321 2356799999999999999999998877 88999
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||++ ++|.+++..... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||.+....
T Consensus 84 v~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 84 VMEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999997 599998876543 589999999999999999999999 99999999999999999999999999988665
Q ss_pred CCCCCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce-----------eehhhhh
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI-----------VTWTRWK 1052 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~-----------~~~~~~~ 1052 (1119)
... .......+++.|+|||.+.+. .++.++|+||+|+++|||++|+.||......+... ..|..+.
T Consensus 158 ~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 158 SPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred CCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 432 122234578899999987654 46899999999999999999999986432110000 0000000
Q ss_pred hcccccccccccccccCCCc-hHHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1053 LQENHECICFLDREISFWDS-DDQL-KALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.................... .+.. ....+.+++.+|++.+|++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000000000000000 0000 24567899999999999999999999875
No 311
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.98 E-value=1.2e-31 Score=296.66 Aligned_cols=250 Identities=22% Similarity=0.371 Sum_probs=195.4
Q ss_pred hhCCceeeecCCccEEEEEeCC-CceEEEEEecccc--------------cccHHHHHHHHhh-cCCCCEEEEeeeeecC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNN-SRKHWAVKKLNRS--------------ETNFDVEIRTLSL-VRHRNILRIVGSCTKD 899 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~-~~~~vavK~~~~~--------------~~~~~~E~~~l~~-l~h~niv~l~~~~~~~ 899 (1119)
|+..+.||+|+||.||+|.+.. +++.+|+|.+... ..++..|+.++.+ ++||||+++++++.++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 4556789999999999999887 6788999987421 1224567777764 7899999999999999
Q ss_pred CceEEEEeccCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 900 EHGFIVTEYMPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 900 ~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
+..++||||+++++|.+++.... ....+++..+++++.|++.|+.|||+.. +++|+||+|+||+++.++.++++|||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEeccc
Confidence 99999999999999999885421 2235889999999999999999999631 89999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccc
Q 001226 979 MSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHE 1058 (1119)
Q Consensus 979 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1119)
.+....... ......++..|+|||...+..++.++||||+|+++|||++|+.||..... ........
T Consensus 160 ~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----~~~~~~~~----- 226 (269)
T cd08528 160 LAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----LSLATKIV----- 226 (269)
T ss_pred ceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----HHHHHHHh-----
Confidence 998654422 23345688899999999988899999999999999999999999864211 10000000
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
+..... ......+..+.+++.+||+.||++||++.|+.++++
T Consensus 227 -----~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 227 -----EAVYEP--LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -----hccCCc--CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 000000 001122356789999999999999999999999885
No 312
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-32 Score=279.51 Aligned_cols=268 Identities=27% Similarity=0.383 Sum_probs=208.2
Q ss_pred CCHHHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc----ccHHHHHHHHhhcC-CCCEEEEeeeeecCCce
Q 001226 828 LRYEDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE----TNFDVEIRTLSLVR-HRNILRIVGSCTKDEHG 902 (1119)
Q Consensus 828 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 902 (1119)
-+++|+.+.|. +.||+|+|+.|--+....++..||||++.+.. ..+-+|++++...+ |+||++++++|+++...
T Consensus 73 g~F~d~YkLt~-e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 73 GKFEDMYKLTS-ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF 151 (463)
T ss_pred chHHHHHHhHH-HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence 35677776664 78999999999999999999999999997643 45778999999886 99999999999999999
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCc---eEEEeccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELE---PKIGDFGM 979 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---vkl~DfGl 979 (1119)
|+|||-|.||+|...+.++. .+++.++.++..+|+.|+.+||.+ ||.|||+||+||+-.+... |||+||.+
T Consensus 152 YLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeecccc
Confidence 99999999999999998866 489999999999999999999999 9999999999999977654 69999988
Q ss_pred cccccCCC-----CCCcccccccCCCcccccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehh
Q 001226 980 SKLISDSH-----SSSTRSAIVGSLGYIAPENAY-----STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWT 1049 (1119)
Q Consensus 980 a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 1049 (1119)
+.-+.... ........+|+..|||||+.. ...|+.+.|.||+|||+|-|+.|..||.+.-+++- -|.
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC---GWd 302 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC---GWD 302 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC---Ccc
Confidence 75432211 112223457888999999543 23588999999999999999999999987544322 122
Q ss_pred hhhhc---ccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1050 RWKLQ---ENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1050 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
+...- +..-+..+-+..+.+........+.+..+++...+..|+..|.++.+++.+
T Consensus 303 rGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 11110 001112222333333333344556778899999999999999999999873
No 313
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=1.4e-31 Score=299.79 Aligned_cols=250 Identities=25% Similarity=0.320 Sum_probs=194.0
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhc-CCCCEEEEeeeeecC-----CceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLV-RHRNILRIVGSCTKD-----EHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-----~~~~lV 905 (1119)
+|+..+.||+|+||.||+|....+++.||+|++... ...+.+|+.+++++ +|||++++++++... +..++|
T Consensus 23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEE
Confidence 456668899999999999999999999999998543 34567899999998 799999999998643 357999
Q ss_pred EeccCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 906 TEYMPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
|||+++++|.++++... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+....
T Consensus 103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 179 (291)
T ss_pred EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence 99999999999886422 123588999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCCcccccccCCCcccccccCCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYST-----RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHEC 1059 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1119)
.... ......++..|+|||.+... .++.++||||+||++|||++|+.||...... ... ........
T Consensus 180 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~---~~~~~~~~--- 250 (291)
T cd06639 180 STRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTL---FKIPRNPP--- 250 (291)
T ss_pred cccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHH---HHHhcCCC---
Confidence 3221 12234678899999987543 3688999999999999999999998643111 000 00000000
Q ss_pred cccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1060 ICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+ .........+.+++.+||+.+|++||++.|++++
T Consensus 251 -----~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 251 -----PTL----LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred -----CCC----CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 000 0011223468899999999999999999999875
No 314
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.2e-31 Score=303.11 Aligned_cols=266 Identities=25% Similarity=0.246 Sum_probs=195.9
Q ss_pred HHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecC--CceE
Q 001226 832 DVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGF 903 (1119)
Q Consensus 832 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 903 (1119)
.+.+|+..+.||+|+||.||+|.+..+++.||+|+++... ..+.+|+.++++++|+|++++++++.+. +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3456777889999999999999999999999999885321 2356799999999999999999998755 4679
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||++ ++|.+++.... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+|++|||.+...
T Consensus 85 lv~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 85 LVMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999996 58888887643 2589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce-----------eehhhh
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI-----------VTWTRW 1051 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~-----------~~~~~~ 1051 (1119)
.... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+... ..|...
T Consensus 159 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 159 GLPA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred CCcc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 5422 12223345788999998765 457899999999999999999999986432111000 000000
Q ss_pred hhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1052 KLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...........-..............+..+.+++.+|++.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000000000000000001124567899999999999999999999975
No 315
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=1.1e-31 Score=297.79 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=196.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhc-CCCCEEEEeeeeecCC------ceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLV-RHRNILRIVGSCTKDE------HGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------~~~ 903 (1119)
.+|+..+.||+|+||.||+|.++.+++.|++|++... ..++.+|+.+++++ .|+||+++++++.+.. ..+
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 4677789999999999999999988999999998643 34678899999998 6999999999997644 479
Q ss_pred EEEeccCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
+||||+++++|.+++.... ....+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||.+..
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcccee
Confidence 9999999999999987533 123588999999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCCcccccccCCCcccccccCC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccc
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYS-----TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENH 1057 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1119)
..... .......++..|+|||.+.. ..++.++||||+||++|||++|+.||...... ... ....
T Consensus 163 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~---~~~~----- 231 (275)
T cd06608 163 LDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RAL---FKIP----- 231 (275)
T ss_pred cccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHH---HHhh-----
Confidence 54321 22234568899999997643 34678999999999999999999998642111 000 0000
Q ss_pred cccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1058 ECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....... ......+..+.+++.+|++.||++|||++|++++
T Consensus 232 ------~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 232 ------RNPPPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred ------ccCCCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0000000 1112245578899999999999999999999874
No 316
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=2.5e-31 Score=293.24 Aligned_cols=247 Identities=28% Similarity=0.430 Sum_probs=201.7
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
|...+.||+|++|.||+|.+..+++.||+|++... ...+.+|+..+++++|+|++++++++..++..++||||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 44568899999999999999999999999988644 3568889999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHY-DCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
+++|.+++.... .+++..+..++.|+++|++|+|+ . +++||||+|+||+++.++.++++|||.+.........
T Consensus 83 ~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 83 GGSLADLLKKVG---KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 999999998753 48999999999999999999999 8 9999999999999999999999999998866432221
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
.....++..|+|||...+..++.++|+||||+++|||++|+.||..... ........... ......
T Consensus 157 --~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~----------~~~~~~ 222 (264)
T cd06623 157 --CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAIC----------DGPPPS 222 (264)
T ss_pred --ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHh----------cCCCCC
Confidence 1234678899999999888899999999999999999999999865421 01111111100 001000
Q ss_pred CCchHHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQL-KALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ... .+..+.+++.+|++.+|++||++.+++++
T Consensus 223 ~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 223 L---PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred C---CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 111 34578899999999999999999999986
No 317
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=8.9e-32 Score=300.98 Aligned_cols=263 Identities=21% Similarity=0.245 Sum_probs=197.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|+++.. ...+.+|+++++.++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 456678899999999999999988999999988532 24578899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++++.+..+..... .+++..+..++.|++.|+.|||+. +++|||++|+||++++++.+|++|||.+........
T Consensus 82 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 82 VERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99877766554433 388999999999999999999999 999999999999999999999999999887654322
Q ss_pred CCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhh--hhccc----ccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRW--KLQEN----HECIC 1061 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~----~~~~~ 1061 (1119)
.......++..|+|||++.+. .++.++||||+|+++|||++|+.||......+. ....... ..... .....
T Consensus 156 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 156 -SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred -ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHhhhcccCc
Confidence 122335678899999998887 789999999999999999999999864311100 0000000 00000 00000
Q ss_pred cccc-cccCCC-------chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1062 FLDR-EISFWD-------SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~~~-~~~~~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+.. ...... ..+...+.++.+++++||+.+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0000 000000 0011125678999999999999999999999864
No 318
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1.3e-31 Score=297.69 Aligned_cols=242 Identities=23% Similarity=0.281 Sum_probs=193.1
Q ss_pred eeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
||+|+||+||+|.+..+++.||+|.+... ...+.+|+.+++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999999999999999988432 22456799999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+...... .....
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~ 153 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKG 153 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC---Ccccc
Confidence 999976553 3588999999999999999999999 9999999999999999999999999998765431 12233
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
..++..|+|||+..+..++.++||||+||++|+|++|+.||......... ....... ..... ..+
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~----------~~~~~----~~~ 218 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-EELKRRT----------LEMAV----EYP 218 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-HHHHhcc----------ccccc----cCC
Confidence 46788999999988888999999999999999999999998653221100 0000000 00000 011
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
...+..+.+++.+||+.+|++|| ++.+++++
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 12245678999999999999999 77778764
No 319
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=8.9e-32 Score=305.34 Aligned_cols=266 Identities=21% Similarity=0.302 Sum_probs=195.6
Q ss_pred hhCCceeeecCCccEEEEEeCC--CceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecC--CceEE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNN--SRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGFI 904 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 904 (1119)
|...++||+|+||.||+|.+.. +++.||+|.+.... ..+.+|+.+++.++||||+++++++.+. ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 4556789999999999999988 78999999986532 3567899999999999999999999887 78999
Q ss_pred EEeccCCCCHHHhhccCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC----CCceEEEecc
Q 001226 905 VTEYMPGGTLFNVLHQNEP--RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS----ELEPKIGDFG 978 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~----~~~vkl~DfG 978 (1119)
||||+++ ++.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||+++. ++.+|++|||
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 9999964 67777654322 22588899999999999999999999 9999999999999999 8999999999
Q ss_pred ccccccCCCC-CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhh---
Q 001226 979 MSKLISDSHS-SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKL--- 1053 (1119)
Q Consensus 979 la~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~--- 1053 (1119)
++........ ........++..|+|||...+ ..++.++||||+||++|||++|+.||............+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 9986643222 222334567889999998765 45789999999999999999999999754332210000000000
Q ss_pred ---------------ccccccccccccc-ccCCC--chHH------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1054 ---------------QENHECICFLDRE-ISFWD--SDDQ------LKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1054 ---------------~~~~~~~~~~~~~-~~~~~--~~~~------~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..........+.. ..... .... ..+.++.+++.+|++.||++|||++|++++
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000000000 00000 0000 233568899999999999999999999865
No 320
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=1e-31 Score=296.39 Aligned_cols=247 Identities=25% Similarity=0.369 Sum_probs=197.6
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeec--CCceEEEEe
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTK--DEHGFIVTE 907 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e 907 (1119)
|+..+.||.|+||.||+|.+..+++.||+|+++.. ...+..|+.+++.++||||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 45568899999999999999999999999988532 2346779999999999999999997754 456799999
Q ss_pred ccCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEecCCCCCCeEeCCCCceEEEeccccc
Q 001226 908 YMPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLH-----YDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSK 981 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~ 981 (1119)
|+++++|.+++.... ....+++..++.++.|++.|++||| +. +++|+||+|+||+++.++.+|++|||++.
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccccc
Confidence 999999999997642 1335899999999999999999999 66 99999999999999999999999999998
Q ss_pred cccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 982 LISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 982 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
....... ......++..|+|||.+.+..++.++|+||+|+++|+|++|+.||.... .. .......
T Consensus 159 ~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~---~~~~~~~-------- 223 (265)
T cd08217 159 ILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QL---QLASKIK-------- 223 (265)
T ss_pred cccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HH---HHHHHHh--------
Confidence 7654321 1223468899999999988889999999999999999999999987532 11 1111100
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....+ ..+...+..+.+++.+|++.+|++||++++|+++
T Consensus 224 --~~~~~---~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 224 --EGKFR---RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --cCCCC---CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00000 1112334578899999999999999999999875
No 321
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=7.9e-32 Score=300.69 Aligned_cols=262 Identities=20% Similarity=0.273 Sum_probs=194.8
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||+|.+..+++.||||+++... ..+.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 455688999999999999999889999999885321 35778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
+ ++|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++.......
T Consensus 82 ~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 82 H-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred c-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 5 68988887654 23589999999999999999999998 99999999999999999999999999987654321
Q ss_pred CcccccccCCCcccccccCCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccc----ccc--
Q 001226 990 STRSAIVGSLGYIAPENAYSTR-LTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHEC----ICF-- 1062 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-- 1062 (1119)
.......++..|+|||...+.. ++.++||||+||++|||++|+.||......+ ................ ...
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHH
Confidence 1122335688999999876544 6889999999999999999999986432111 0000000000000000 000
Q ss_pred ccccccCCCch-----HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWDSD-----DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.......+... .......+.+++.+|++.||++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000000000 01123457899999999999999999999864
No 322
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=3e-31 Score=292.64 Aligned_cols=242 Identities=22% Similarity=0.328 Sum_probs=189.6
Q ss_pred hhCCce--eeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 836 ATEGRI--IGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 836 ~~~~~~--lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
++..+. +|+|+||.||++..+.+++.+|+|.+...... ..|+.....+ +|||++++++++..++..++||||++++
T Consensus 16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 94 (267)
T PHA03390 16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-AIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDG 94 (267)
T ss_pred hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-hhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCC
Confidence 334444 59999999999999999999999998653211 1133333323 6999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-ceEEEeccccccccCCCCCCc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-EPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~vkl~DfGla~~~~~~~~~~~ 991 (1119)
+|.+++.... .+++..+..++.|+++|+.|||+. +++||||||+||+++.++ .++++|||.+......
T Consensus 95 ~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~----- 163 (267)
T PHA03390 95 DLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP----- 163 (267)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-----
Confidence 9999998764 489999999999999999999999 999999999999999998 9999999998765431
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
....++..|+|||++.+..++.++||||+|+++|||++|+.||.....+......+.... .+...
T Consensus 164 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------~~~~~--- 228 (267)
T PHA03390 164 -SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-----------QKKLP--- 228 (267)
T ss_pred -ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-----------cccCC---
Confidence 223578999999999888899999999999999999999999974322221111111110 01111
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPS-MREVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ell~~ 1105 (1119)
.....+..+.+++.+|++.+|++||+ ++|++++
T Consensus 229 -~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 229 -FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred -cccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 11134457789999999999999996 6998864
No 323
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=2.7e-31 Score=299.68 Aligned_cols=244 Identities=29% Similarity=0.380 Sum_probs=193.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|...+.||+|+||.||+|....+++.||+|++... ..++.+|+.+++.++||||+++.+++.+++..++|||
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 466668899999999999999988999999987422 1346789999999999999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|++ |++.+++..... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++......
T Consensus 96 ~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 96 YCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred hhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 996 677777765432 489999999999999999999998 9999999999999999999999999998754321
Q ss_pred CCCcccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
....+++.|+|||++. .+.++.++||||||+++|||++|+.||...... ......... . .
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~~~~~~~~~--~-----~ 231 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHIAQN--D-----S 231 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----HHHHHHhcC--C-----C
Confidence 2345788999999874 456889999999999999999999998643110 000000000 0 0
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
+. ......+..+.+++.+||+.+|++||++++++++-.
T Consensus 232 ~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 232 PT-----LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred CC-----CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 00 001123457899999999999999999999998643
No 324
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=7.8e-32 Score=295.95 Aligned_cols=246 Identities=25% Similarity=0.391 Sum_probs=198.5
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||+|..+.++..||+|.+.. ....+.+|+.+++.++|+||+++++.+.++...++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 5566889999999999999999999999998843 2346778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCc-eEEEeccccccccCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELE-PKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-vkl~DfGla~~~~~~~~ 988 (1119)
++++|.+++..... ..+++..+..++.|+++|+.|||+. +++|+||||+||++++++. +|++|||.+........
T Consensus 82 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 82 DGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 99999999976542 2478999999999999999999998 9999999999999998864 69999999876643221
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......+++.|+|||+..+..++.++|+||+|+++|||++|+.||.... .......... ....+
T Consensus 158 --~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~------~~~~~--- 221 (257)
T cd08225 158 --LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQ------GYFAP--- 221 (257)
T ss_pred --cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhc------ccCCC---
Confidence 1223458889999999888889999999999999999999999986421 1111111100 00000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.....+..+.+++.+|++.+|++|||++|++++
T Consensus 222 ----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 222 ----ISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ----CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 011223468899999999999999999999875
No 325
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=2.1e-31 Score=293.54 Aligned_cols=240 Identities=22% Similarity=0.325 Sum_probs=194.8
Q ss_pred eeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
||.|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999999999988999999988532 24578899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++.... .+++..+..++.|+++|++|+|+. +++|+||+|+||+++.++.++++|||.+....... ....
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~ 151 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWT 151 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccc
Confidence 99998754 388899999999999999999998 99999999999999999999999999998765432 2223
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
..++..|+|||.+.+..++.++|+||+|+++|||++|..||.....+. ...... ..+.... ...+
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~----------~~~~~~~--~~~~ 216 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYND----------ILKGNGK--LEFP 216 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHH----------HhccCCC--CCCC
Confidence 467889999999888889999999999999999999999997542111 000000 0000000 0011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRPS-----MREVVGF 1105 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs-----~~ell~~ 1105 (1119)
...+..+.+++.+||+.+|++||+ ++|++++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 112457899999999999999999 8888773
No 326
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=6.3e-32 Score=301.21 Aligned_cols=248 Identities=22% Similarity=0.300 Sum_probs=206.0
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|...+.||+|.|+.|..|++..++..||||.+++.. ..+.+|+++|..+.|||||+++.+...+...|+||||+
T Consensus 58 y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya 137 (596)
T KOG0586|consen 58 YVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYA 137 (596)
T ss_pred eeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEec
Confidence 444588999999999999999999999999986532 23678999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
.+|.+++|+..++. ..+..+..+..|+.+|++|+|++ .|||||||++|++++.+..+||+|||++..+.. .
T Consensus 138 ~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~---~ 208 (596)
T KOG0586|consen 138 SGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY---G 208 (596)
T ss_pred cCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc---c
Confidence 99999999998874 45578889999999999999999 999999999999999999999999999988753 3
Q ss_pred CcccccccCCCcccccccCCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYSTRL-TEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......+|++.|.|||.+.+..| ++++|+||+|+++|-|+.|..||++..- ..... +.+.
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-----k~Lr~--------------rvl~ 269 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-----KELRP--------------RVLR 269 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-----ccccc--------------hhee
Confidence 44556789999999999998776 5889999999999999999999985421 11000 1111
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
.....+.....++.+++++++-.+|.+|++.+++.++-.....
T Consensus 270 gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 270 GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred eeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 1111122234567899999999999999999999987655443
No 327
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=3e-31 Score=290.21 Aligned_cols=246 Identities=28% Similarity=0.410 Sum_probs=200.6
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
|+..+.||+|++|.||++.+..+++.|++|++.... ..+.+|+..++.++||+++++++++..+...++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 456688999999999999999889999999986543 5688999999999999999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++.... ..+++..+..++.|++.|+++||.. +++||||+|+||++++++.++|+|||.+........
T Consensus 82 ~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 82 GSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 99999988763 2489999999999999999999998 999999999999999999999999999887654321
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||...... . ....... ... +..
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~--~~~~~~~---~~~-----~~~---- 217 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--K--ALFKIAT---NGP-----PGL---- 217 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--H--HHHHHHh---cCC-----CCc----
Confidence 33456888999999988888999999999999999999999998643110 0 0000000 000 000
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......+..+.+++.+|++.+|++|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 218 RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred CcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0111124568899999999999999999999875
No 328
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=5.2e-32 Score=297.58 Aligned_cols=244 Identities=26% Similarity=0.299 Sum_probs=198.4
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..+.||.|+||.||+|.+..++..||+|++... ...+.+|+.++++++||||+++++.+.++...++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 55668999999999999999988999999988532 34577899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++++|.+++.... .+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++++|||.+.......
T Consensus 82 ~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 82 LLGGDLRYHLSQKV---KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999997653 488999999999999999999998 99999999999999999999999999988664322
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......++..|+|||...+..++.++|+||+|+++|+|++|+.||......... ...... ..
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~----------~~--- 216 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRD---QIRAKQ----------ET--- 216 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHH---HHHHHh----------cc---
Confidence 223345788999999988888999999999999999999999998754221010 000000 00
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCH--HHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSM--REVVG 1104 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~--~ell~ 1104 (1119)
.....+...+..+.+++.+||+.+|.+||++ +|+++
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 217 ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 0001112234678899999999999999999 77654
No 329
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=295.70 Aligned_cols=256 Identities=24% Similarity=0.381 Sum_probs=204.7
Q ss_pred CCCCCHHHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEecc------cccccHHHHHHHHhhcCCCCEEEEeeeeec
Q 001226 825 PRDLRYEDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLN------RSETNFDVEIRTLSLVRHRNILRIVGSCTK 898 (1119)
Q Consensus 825 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 898 (1119)
.....+..+.+.-..+++|+|.||+||-|.++.+|+.||||++. +.+++..+|+.+++.++||.||.+...|+.
T Consensus 555 qe~vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET 634 (888)
T KOG4236|consen 555 QENVDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET 634 (888)
T ss_pred hhhhhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC
Confidence 34445555655556689999999999999999999999999984 345778999999999999999999999999
Q ss_pred CCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC---CceEEE
Q 001226 899 DEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE---LEPKIG 975 (1119)
Q Consensus 899 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~vkl~ 975 (1119)
.+..++|||-+.|.=|.-++.... ..+++...+.++.||+.|++|||.+ +|||+|+||+||++.+. .++|++
T Consensus 635 ~ervFVVMEKl~GDMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 635 PERVFVVMEKLHGDMLEMILSSEK--GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred CceEEEEehhhcchHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeec
Confidence 999999999996544555555443 3588888899999999999999999 99999999999999654 579999
Q ss_pred eccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcc
Q 001226 976 DFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQE 1055 (1119)
Q Consensus 976 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1055 (1119)
|||+|+.+++. ..+...+||+.|+|||++..+.|...-|+||.||++|--+.|..||... .++.+-..
T Consensus 710 DFGfARiIgEk---sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIndQIQ----- 777 (888)
T KOG4236|consen 710 DFGFARIIGEK---SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDINDQIQ----- 777 (888)
T ss_pred cccceeecchh---hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchhHHhh-----
Confidence 99999998763 3345679999999999999999999999999999999999999998642 22221110
Q ss_pred cccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1056 NHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ++++-+ .....+.+....++|...++..=.+|-|.+.-+.|
T Consensus 778 --N-AaFMyP-----p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 778 --N-AAFMYP-----PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred --c-cccccC-----CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 0 111111 12224445567889999999999999988776543
No 330
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=6.4e-32 Score=308.78 Aligned_cols=269 Identities=23% Similarity=0.296 Sum_probs=196.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecC-----CceEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKD-----EHGFI 904 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~l 904 (1119)
+|+..++||+|+||.||+|.+..+++.||+|+++.. ...+.+|+.++++++||||+++++++... ...|+
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence 566778999999999999999999999999988532 23466799999999999999999987544 35799
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
|+||++ +++.+++... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||++....
T Consensus 86 v~e~~~-~~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 86 VQELME-TDLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred Eehhcc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 999996 5888777543 488999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCC-CcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhh-hcccccccc
Q 001226 985 DSHSS-STRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWK-LQENHECIC 1061 (1119)
Q Consensus 985 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 1061 (1119)
..... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+.... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~ 236 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLILGVLGTPSQEDLNC 236 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHH
Confidence 32211 12233568899999998654 568899999999999999999999986421100 000000000 000000000
Q ss_pred cccc-------cccCCCc-----hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHccccc
Q 001226 1062 FLDR-------EISFWDS-----DDQLKALRLLELALECTRQVADMRPSMREVVGF--LIKLNDK 1112 (1119)
Q Consensus 1062 ~~~~-------~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~--L~~~~~~ 1112 (1119)
..+. ....... .....+.++.+++.+||+.+|++|||++|++++ ++...+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 0000 0000000 001224568899999999999999999999998 7666654
No 331
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=1.6e-31 Score=300.00 Aligned_cols=264 Identities=21% Similarity=0.242 Sum_probs=192.8
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcC-CCCEEEEeeeeecCCc-----e
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVR-HRNILRIVGSCTKDEH-----G 902 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~-----~ 902 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|+.+... ..+.+|+.+++.++ ||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 3566788999999999999999999999999875322 35778999999995 6999999999877655 7
Q ss_pred EEEEeccCCCCHHHhhccCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC-CCceEEEeccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEP--RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS-ELEPKIGDFGM 979 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~vkl~DfGl 979 (1119)
|+||||+++ ++.+++..... ...+++..+..++.||++|+.|||+. +++||||+|+||+++. ++.+|++|||.
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeeccc
Confidence 999999985 89888865432 23589999999999999999999999 9999999999999998 88999999999
Q ss_pred cccccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhh-hcccc
Q 001226 980 SKLISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWK-LQENH 1057 (1119)
Q Consensus 980 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~ 1057 (1119)
+....... .......+++.|+|||.+.+ ..++.++||||+|+++|||++|..||........ ........ .....
T Consensus 158 ~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (295)
T cd07837 158 GRAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFKLLGTPTEQ 234 (295)
T ss_pred ceecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHhCCCChh
Confidence 87653321 11223356889999998765 4578999999999999999999999864311100 00000000 00000
Q ss_pred ccccccc--c--cccCCCch-----HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1058 ECICFLD--R--EISFWDSD-----DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1058 ~~~~~~~--~--~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....... . ....+... ....+..+.+++.+|++.+|++||+++|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000 0 00000000 01234568899999999999999999999865
No 332
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=8e-32 Score=301.29 Aligned_cols=250 Identities=25% Similarity=0.345 Sum_probs=190.6
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
++..+.||+|+||.||++.+..+++.||+|.+... ...+.+|+.++.++. ||||+++++++..++..+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 34457799999999999999999999999988532 235678999999986 999999999999989999999998
Q ss_pred CCCCHHHhh---ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 910 PGGTLFNVL---HQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 910 ~~gsL~~~l---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
+ +++.++. .... ...+++..+..++.+++.|++|||+.. +++||||||+||+++.++.++++|||+++.....
T Consensus 86 ~-~~l~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 86 D-ISLDKFYKYVYEVL-KSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred c-CCHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 5 4554433 2221 235899999999999999999999743 8999999999999999999999999998765432
Q ss_pred CCCCcccccccCCCcccccccCCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYST---RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
. ......++..|+|||.+.+. .++.++||||+||++|||++|+.||..... ........ ... .
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~-~~~-------~ 227 (288)
T cd06616 162 I---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS---VFDQLTQV-VKG-------D 227 (288)
T ss_pred C---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch---HHHHHhhh-cCC-------C
Confidence 1 12233578899999988765 688999999999999999999999864310 00000000 000 0
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+.+. .......+..+.+++.+||+.+|++|||+++|+++
T Consensus 228 ~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 PPILS--NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCcCC--CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 01112245578899999999999999999999986
No 333
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=2.9e-31 Score=291.58 Aligned_cols=248 Identities=29% Similarity=0.422 Sum_probs=202.4
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC--CceEEEEe
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGFIVTE 907 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e 907 (1119)
|+..+.||+|++|.||+|.+..+++.|++|++... .+.+.+|+..+++++||||+++++.+.+. ...++|+|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 45568899999999999999988999999988543 34578899999999999999999999888 88999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+|++|+||+++.++.++++|||.+.......
T Consensus 82 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 82 YVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred ecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 999999999998765 589999999999999999999998 99999999999999999999999999998775543
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
.........++..|+|||...+..++.++||||+|+++|+|++|+.||..... .. ...+..... ...
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~--~~~~~~~~~--------~~~ 222 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PM--AALYKIGSS--------GEP 222 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hH--HHHHhcccc--------CCC
Confidence 21123345688899999999888899999999999999999999999875420 00 000000000 000
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...+...+..+.+++.+|++.+|++||++.|++++
T Consensus 223 ---~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 223 ---PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ---cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 01111225678999999999999999999999875
No 334
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-32 Score=283.21 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=207.5
Q ss_pred CCceeeecCCccEEEEEeCCC-----ceEEEEEeccccccc-----HHHHHHHHhhcCCCCEEEEeeeeecC-CceEEEE
Q 001226 838 EGRIIGKGKHGTVYRTLSNNS-----RKHWAVKKLNRSETN-----FDVEIRTLSLVRHRNILRIVGSCTKD-EHGFIVT 906 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~~-----~~~vavK~~~~~~~~-----~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~ 906 (1119)
...++.+|.||.||.|.+++. .+.|.+|.++....+ +..|...+..+.|||+.++.+++.++ ...+++|
T Consensus 288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y 367 (563)
T KOG1024|consen 288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLY 367 (563)
T ss_pred chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEE
Confidence 345789999999999987653 345677777654443 45688888888999999999988664 5678999
Q ss_pred eccCCCCHHHhhcc-----CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccc
Q 001226 907 EYMPGGTLFNVLHQ-----NEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSK 981 (1119)
Q Consensus 907 e~~~~gsL~~~l~~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~ 981 (1119)
.++.-|+|+.++.. ....+.++..+.+.++.|++.|++|||.+ +|||.||..+|+++|+..+||++|-.+++
T Consensus 368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchhcc
Confidence 99999999999983 33345688889999999999999999999 99999999999999999999999999999
Q ss_pred cccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhccccccc
Q 001226 982 LISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQENHECI 1060 (1119)
Q Consensus 982 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1119)
...+.++.........+..||+||.+....|+.++|||||||++|||+| |+.||....+ .+..
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP----------------fEm~ 508 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP----------------FEME 508 (563)
T ss_pred ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH----------------HHHH
Confidence 9988888887788888999999999999999999999999999999997 9999864311 1111
Q ss_pred ccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1061 CFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
.++....+. ..+..++.+++.+|.-||+..|++||+++|++.-|.++-.+
T Consensus 509 ~ylkdGyRl--aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 509 HYLKDGYRL--AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred HHHhcccee--cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 111111111 12345677899999999999999999999999998887543
No 335
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=3.8e-31 Score=296.24 Aligned_cols=255 Identities=16% Similarity=0.200 Sum_probs=183.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCC---ceEEEEEecccccccHHH---------------HHHHHhhcCCCCEEEEeeee
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNS---RKHWAVKKLNRSETNFDV---------------EIRTLSLVRHRNILRIVGSC 896 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~---~~~vavK~~~~~~~~~~~---------------E~~~l~~l~h~niv~l~~~~ 896 (1119)
+|...++||+|+||.||+|.+..+ +..+|+|+.......+.. +...++.+.|++++++++++
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 577788999999999999998876 667777765433222222 22334556899999999876
Q ss_pred ecCC----ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCce
Q 001226 897 TKDE----HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEP 972 (1119)
Q Consensus 897 ~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~v 972 (1119)
.... ..++++|+.. .++.+.+.... ..++..+..++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 93 SFKRCRMYYRFILLEKLV-ENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eEecCCceEEEEEEehhc-cCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcE
Confidence 5443 3477888773 46666665432 256788899999999999999999 99999999999999999999
Q ss_pred EEEeccccccccCCCCC-----CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceee
Q 001226 973 KIGDFGMSKLISDSHSS-----STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVT 1047 (1119)
Q Consensus 973 kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 1047 (1119)
+++|||+|+........ .......||+.|+|||...+..++.++||||+||++|||++|+.||......... ..
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~-~~ 244 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL-IH 244 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH-HH
Confidence 99999999866432111 1122346999999999999999999999999999999999999999754221111 10
Q ss_pred hhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1048 WTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
...... ........... ...+..+.+++..|++.+|++||+++++++.++
T Consensus 245 ~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDF-----IKRLHEGKIKI-----KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHH-----HHHhhhhhhcc-----CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 000000 00000011110 112456889999999999999999999998763
No 336
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=2.1e-31 Score=301.42 Aligned_cols=268 Identities=21% Similarity=0.289 Sum_probs=194.1
Q ss_pred HHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCC----
Q 001226 831 EDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDE---- 900 (1119)
Q Consensus 831 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 900 (1119)
.++.+|+..+.||+|+||.||+|....+++.||||++.... ..+.+|+.++++++||||+++++++...+
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 34567888899999999999999999999999999874321 23467999999999999999999886543
Q ss_pred ----ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEe
Q 001226 901 ----HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGD 976 (1119)
Q Consensus 901 ----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~D 976 (1119)
..++||||++ +++.+++.... ..+++.++..++.|++.|+.|||+. +++|+||||+||+++.++.+|++|
T Consensus 89 ~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 89 RYKGSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred CCCceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECc
Confidence 3499999996 58888876543 2489999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCC--CcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhh---
Q 001226 977 FGMSKLISDSHSS--STRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTR--- 1050 (1119)
Q Consensus 977 fGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~--- 1050 (1119)
||.+......... .......++..|+|||.+.+. .++.++||||+|+++|||++|+.||....... .......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~-~~~~~~~~~~ 241 (310)
T cd07865 163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH-QLTLISQLCG 241 (310)
T ss_pred CCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 9999866432211 122234578899999987654 47889999999999999999999986432110 0000000
Q ss_pred ----hhhcccccccccccccccCCC--ch-----HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1051 ----WKLQENHECICFLDREISFWD--SD-----DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1051 ----~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
............-........ .. .......+.+++.+|++.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000000000000000000000 00 00112456799999999999999999999875
No 337
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=1.7e-31 Score=298.61 Aligned_cols=241 Identities=24% Similarity=0.324 Sum_probs=193.9
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLF 915 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 915 (1119)
.+||+|+||.||++....+++.||+|++... ...+.+|+.+++.++|+|++++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999999999999999987532 235778999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCccccc
Q 001226 916 NVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAI 995 (1119)
Q Consensus 916 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~ 995 (1119)
+++... .+++..+..++.|++.|++|+|+. +++||||+|+||++++++.++++|||.+....... ......
T Consensus 106 ~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~ 176 (292)
T cd06657 106 DIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSL 176 (292)
T ss_pred HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc--cccccc
Confidence 987543 378899999999999999999999 99999999999999999999999999887554321 122334
Q ss_pred ccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHH
Q 001226 996 VGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQ 1075 (1119)
Q Consensus 996 ~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1119)
.+++.|+|||...+..++.++|+||+|+++|||++|..||...... ....... ....+.+. ...
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~----------~~~~~~~~----~~~ 240 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIR----------DNLPPKLK----NLH 240 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH----------hhCCcccC----Ccc
Confidence 6789999999988888899999999999999999999998642110 0000000 00011110 011
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1076 LKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1076 ~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+..+.+++.+||+.+|.+||++.+++++
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 223467789999999999999999999985
No 338
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3.5e-31 Score=294.13 Aligned_cols=239 Identities=27% Similarity=0.312 Sum_probs=187.0
Q ss_pred eeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHH---HhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 841 IIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRT---LSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 841 ~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~---l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.||+|+||.||+|.+..+++.||+|.+.... ..+..|..+ ++...||+|+++++++.+++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999999889999999885321 113334333 344579999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+++|.+++.... .+++..+..++.|+++|+.|||+. +++||||||+||+++.++.++++|||++.......
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 999999887644 489999999999999999999998 99999999999999999999999999987554321
Q ss_pred cccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 991 TRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
.....|+..|+|||...++ .++.++||||+||++|||++|+.||.......... ...... .....+
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~--~~~~~~--------~~~~~~-- 218 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMTL--------TMAVEL-- 218 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH--HHHHhh--------ccCCCC--
Confidence 2234689999999988754 68899999999999999999999997542211110 000000 000111
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
+...+..+.+++.+|++.+|.+|| ++++++++
T Consensus 219 ----~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 219 ----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred ----CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 111245788999999999999999 99999875
No 339
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=3.9e-31 Score=294.79 Aligned_cols=257 Identities=21% Similarity=0.221 Sum_probs=190.6
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcC-CCCEEEEeeeeecC--CceEEEEec
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVR-HRNILRIVGSCTKD--EHGFIVTEY 908 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~e~ 908 (1119)
+..+.||+|+||.||+|.+..++..||+|+++... ....+|+.+++++. |||++++++++.++ +..++||||
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 44578999999999999999889999999886432 12346888888885 99999999999887 889999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++ +++.+++.... ..+++.++..++.|++.|++|||+. +++||||+|+||+++. +.+|++|||.+........
T Consensus 82 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 82 MD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred CC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 96 58888877543 2589999999999999999999999 9999999999999999 9999999999986643221
Q ss_pred CCcccccccCCCcccccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcc-cccc------c
Q 001226 989 SSTRSAIVGSLGYIAPENAY-STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQE-NHEC------I 1060 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~------~ 1060 (1119)
.....++..|+|||... +..++.++||||+||++|||++|+.||......+ ........... .... .
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 155 ---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred ---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCCCHHHHHhhccc
Confidence 12345788999999764 4567889999999999999999999996532111 00000000000 0000 0
Q ss_pred ccccccccCCC-----chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 CFLDREISFWD-----SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 ~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...+....... ......+..+.+++.+||+.+|++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000000000 0011335688999999999999999999999875
No 340
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=4.5e-31 Score=294.88 Aligned_cols=247 Identities=27% Similarity=0.381 Sum_probs=199.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
|+..+.+|+|+||.||+|.+..+++.||+|+++.. ...+.+|+..++.++|+|++++++++..+...++|+||++++
T Consensus 21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 100 (286)
T cd06614 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGG 100 (286)
T ss_pred chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCC
Confidence 44457799999999999999988999999998644 346788999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
+|.+++.... ..+++..+..++.|++.|++|||+. +++|+|++|+||+++.++.++|+|||.+....... ...
T Consensus 101 ~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--~~~ 173 (286)
T cd06614 101 SLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK--SKR 173 (286)
T ss_pred cHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccch--hhh
Confidence 9999998765 2589999999999999999999998 99999999999999999999999999887554321 122
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
....++..|+|||...+..++.++|+||+||++|+|++|+.||...... ....... ...... ..
T Consensus 174 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~----~~~~~~~-----------~~~~~~-~~ 237 (286)
T cd06614 174 NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL----RALFLIT-----------TKGIPP-LK 237 (286)
T ss_pred ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-----------hcCCCC-Cc
Confidence 2345788999999988888999999999999999999999998632111 0000000 000000 01
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.....+..+.+++.+|++.+|.+||++.+++++
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111234578899999999999999999999864
No 341
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=9.9e-31 Score=296.36 Aligned_cols=249 Identities=27% Similarity=0.387 Sum_probs=196.4
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|...+.||+|+||.||+|.+..++..||+|++... ..++.+|+.+++.++|||++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 44557899999999999999988999999988532 12467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++ |++.+.+..... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++.....
T Consensus 107 ~~-g~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 107 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred CC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 96 578777765432 489999999999999999999999 999999999999999999999999998865432
Q ss_pred CCcccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
.....+++.|+|||.+. .+.++.++||||+||++|||++|+.||..... ......... .
T Consensus 178 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~~~~~~~~~-----------~ 239 (317)
T cd06635 178 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQ-----------N 239 (317)
T ss_pred ---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHHh-----------c
Confidence 12345788999999863 45688999999999999999999999864210 000000000 0
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccC
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKN 1113 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~ 1113 (1119)
.... ......+..+.+++.+|++.+|.+||++.+++++...+....
T Consensus 240 ~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 240 ESPT--LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred cCCC--CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 0000 011123346789999999999999999999999876555443
No 342
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=4.6e-31 Score=289.20 Aligned_cols=244 Identities=25% Similarity=0.432 Sum_probs=199.4
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|++|.||+|.+..+++.||+|.+.... ..+.+|++++++++|||++++++++.+++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 566789999999999999999889999999985433 35788999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+.........
T Consensus 82 ~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 82 ENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999998663 489999999999999999999999 9999999999999999999999999999877543221
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccC
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISF 1069 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1119)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||.... ..... +.... .. ...
T Consensus 156 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~--~~~~~-~~-----~~~--- 218 (254)
T cd06627 156 --DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAAL--FRIVQ-DD-----HPP--- 218 (254)
T ss_pred --ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHH--HHHhc-cC-----CCC---
Confidence 233467889999998887778999999999999999999999986421 10000 00000 00 000
Q ss_pred CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1070 WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1070 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+...+..+.+++.+|++.+|++||++.+++.+
T Consensus 219 ---~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 219 ---LPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred ---CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 111224567899999999999999999999853
No 343
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=2e-31 Score=297.35 Aligned_cols=260 Identities=22% Similarity=0.258 Sum_probs=194.6
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+..+.||+|++|.||+|.+..++..||+|++... ...+.+|+.+++.++|||++++++++.+++..|+||||++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~ 81 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD 81 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence 4457899999999999999988999999988532 2347789999999999999999999999999999999995
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
++|.+++..... ..+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++++|||.+....... .
T Consensus 82 -~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~ 154 (283)
T cd07835 82 -LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--R 154 (283)
T ss_pred -cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--c
Confidence 689999876542 3589999999999999999999998 99999999999999999999999999987653321 1
Q ss_pred cccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcc-------ccccccc
Q 001226 991 TRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQE-------NHECICF 1062 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 1062 (1119)
......++..|+|||++.+. .++.++||||+|+++|||++|+.||....... ............ ......+
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhh
Confidence 12233568899999987654 57889999999999999999999986431110 000000000000 0000000
Q ss_pred ccccccCCC-----chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWD-----SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.. ....+. ......+..+.+++.+|++.+|++||+++|++++
T Consensus 234 ~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 234 KP-TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hh-hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 000000 0011123568899999999999999999999864
No 344
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=5.6e-32 Score=253.52 Aligned_cols=260 Identities=21% Similarity=0.270 Sum_probs=195.1
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|...++||+|.||+||+|+.+++++.||+|.++-+. ....+|+-+++.++|.|||+++++...+...-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 333478999999999999999999999999986433 34678999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
..+|..|...... .++.+.++.++.|+.+|+.+.|++ ++.|||+||+|.+++.+|+.|++|||+++..+- +.
T Consensus 84 -dqdlkkyfdslng--~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgi--pv 155 (292)
T KOG0662|consen 84 -DQDLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGI--PV 155 (292)
T ss_pred -hHHHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCC--ce
Confidence 5688888876543 488899999999999999999999 999999999999999999999999999997754 23
Q ss_pred CcccccccCCCcccccccCCCC-CCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhc----cccc-cccc
Q 001226 990 STRSAIVGSLGYIAPENAYSTR-LTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQ----ENHE-CICF 1062 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~ 1062 (1119)
...+..+.|.+|++|.++.+.. |+...|+||.||++.|+.. |+.-|.+. ..++.+.. .-+... +.+. +...
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~-dvddqlkr-if~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKR-IFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC-cHHHHHHH-HHHHhCCCccccCCccccC
Confidence 3445668899999999988754 8899999999999999995 55444332 21111111 000000 0000 0011
Q ss_pred ccc-------cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDR-------EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~-------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
-|- ....|...-+.....-.+++++.+.-+|..|.++++.+++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 110 0001111112222345678888899999999999998875
No 345
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=5.5e-31 Score=293.73 Aligned_cols=261 Identities=21% Similarity=0.278 Sum_probs=196.9
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+..+.||+|++|.||+|.+..+++.+|+|+++... ..+.+|+.++++++|+||+++++++.++...++|+||++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence 44578999999999999999889999999885432 347789999999999999999999999999999999997
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+ ++.+++.... ..+++..+..++.|+++|+.|||+. +++|+||+|+||+++.++.++++|||.+....... .
T Consensus 82 ~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~ 153 (283)
T cd05118 82 T-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--R 153 (283)
T ss_pred C-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--c
Confidence 5 8888887643 2589999999999999999999999 99999999999999999999999999987665432 1
Q ss_pred cccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCce-----------eehhhhhhccccc
Q 001226 991 TRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDI-----------VTWTRWKLQENHE 1058 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~-----------~~~~~~~~~~~~~ 1058 (1119)
......++..|+|||...+. .++.++|+||+|+++|+|++|+.||......+.-. ..|..........
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 22234578899999988766 78999999999999999999999986432110000 0000000000000
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.....+.............+.++.+++.+||+.||.+||++++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000000000001112345678999999999999999999999864
No 346
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=3.8e-31 Score=291.04 Aligned_cols=238 Identities=24% Similarity=0.341 Sum_probs=185.5
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHH-hhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTL-SLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+.||+|+||.||+|.+..+++.||+|+++... ..+..|...+ ...+|||++++++++..++..|+|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999999889999999985432 1233344433 345899999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++.....
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 99999997654 488999999999999999999998 999999999999999999999999999875432
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
.....++..|+|||...+..++.++||||+|+++|||++|..||...... . .+.... ........
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~--~~~~~~-----------~~~~~~~~ 214 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--A--VFDNIL-----------SRRINWPE 214 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--H--HHHHHH-----------hcccCCCC
Confidence 22345788999999988888899999999999999999999998643111 0 010000 00000000
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSMREVVG 1104 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~ 1104 (1119)
......+..+.+++.+||+.+|++||++.++.+
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 111123457889999999999999997654433
No 347
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=5.4e-31 Score=300.04 Aligned_cols=259 Identities=19% Similarity=0.254 Sum_probs=190.4
Q ss_pred eeeec--CCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 841 IIGKG--KHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 841 ~lG~G--~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
.||+| +||+||+|.+..+++.||+|++.... +.+.+|+.+++.++||||+++++++..++..++|+||++++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 35555 99999999999999999999985322 34678999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC---
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS--- 989 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~--- 989 (1119)
++.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++||+.+.........
T Consensus 85 ~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99999887543 2488899999999999999999998 9999999999999999999999999865433211110
Q ss_pred --CcccccccCCCcccccccCC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhh-----hh---hc---
Q 001226 990 --STRSAIVGSLGYIAPENAYS--TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTR-----WK---LQ--- 1054 (1119)
Q Consensus 990 --~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~-----~~---~~--- 1054 (1119)
.......++..|+|||++.+ ..++.++||||+||++|||++|+.||............... +. ..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 01112235667999998876 34789999999999999999999999654211100000000 00 00
Q ss_pred -----ccccc----c----------ccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1055 -----ENHEC----I----------CFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1055 -----~~~~~----~----------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..... . ...+... ...........+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERL--RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccc--cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00000 0 0000000 011223456678999999999999999999999865
No 348
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=5.7e-31 Score=301.18 Aligned_cols=270 Identities=24% Similarity=0.310 Sum_probs=198.7
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhc-CCCCEEEEeeeeecC--CceEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLV-RHRNILRIVGSCTKD--EHGFI 904 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~~l 904 (1119)
.+|+..+.||+|+||.||+|.+..+++.||+|++.. ....+.+|+.+++++ +||||+++++++... ...|+
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 467777899999999999999998899999998743 123466799999999 999999999988653 35799
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
||||++ ++|..++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.+....
T Consensus 87 v~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 87 VFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred Eecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 999997 5898888754 478889999999999999999998 99999999999999999999999999998664
Q ss_pred CCCCC---CcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceee------------h
Q 001226 985 DSHSS---STRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVT------------W 1048 (1119)
Q Consensus 985 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~------------~ 1048 (1119)
..... .......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+. ... +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHH
Confidence 43221 12233568899999998754 4578899999999999999999999864321110 000 0
Q ss_pred hhhhhcccccccccc-cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHccccc
Q 001226 1049 TRWKLQENHECICFL-DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF--LIKLNDK 1112 (1119)
Q Consensus 1049 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~--L~~~~~~ 1112 (1119)
..............+ ..............+..+.+++.+||+.+|++|||+++++++ +.++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 000000000000000 000000000001134578999999999999999999999987 5565444
No 349
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=5.5e-31 Score=303.17 Aligned_cols=257 Identities=25% Similarity=0.331 Sum_probs=195.2
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC------C
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD------E 900 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 900 (1119)
..+|+..+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.++++++||||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 45778889999999999999999999999999998532 13456799999999999999999988643 3
Q ss_pred ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccc
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMS 980 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla 980 (1119)
..|+||||++ ++|.+++... ++...+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred cEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 5699999995 5888877542 78889999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhh--------
Q 001226 981 KLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWK-------- 1052 (1119)
Q Consensus 981 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-------- 1052 (1119)
+...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||......+ .+....
T Consensus 166 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~ 238 (353)
T cd07850 166 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID----QWNKIIEQLGTPSD 238 (353)
T ss_pred eeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHhcCCCCH
Confidence 8664321 1223467889999999998899999999999999999999999986432100 000000
Q ss_pred -------------hcc-----cccccccccccccC--CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1053 -------------LQE-----NHECICFLDREISF--WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1053 -------------~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
... .............. ........+..+.+++.+|++.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 00000000000000 000011235567899999999999999999999976
No 350
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=4.5e-31 Score=295.09 Aligned_cols=261 Identities=25% Similarity=0.294 Sum_probs=194.9
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecC--CceEEEEec
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGFIVTEY 908 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e~ 908 (1119)
+..+.||+|+||.||+|....+++.||+|++.... ..+.+|+.+++.++|||++++++++.+. +..++||||
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY 81 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence 44578999999999999999989999999986442 3467899999999999999999999887 789999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++ +|.+++.... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++++|||.+........
T Consensus 82 ~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 82 MDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 974 8888887653 2589999999999999999999998 999999999999999999999999999987654321
Q ss_pred CCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhh-hhhccccccccc----
Q 001226 989 SSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTR-WKLQENHECICF---- 1062 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---- 1062 (1119)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ...... ............
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 156 -ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ-LEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred -ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchhhccccccch
Confidence 12233456788999997664 4578999999999999999999999864321100 000000 000000000000
Q ss_pred ----ccccccCCC---chHHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 ----LDREISFWD---SDDQL-KALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ----~~~~~~~~~---~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......... ..... .+..+.+++.+|++.+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000000 00001 25678999999999999999999999864
No 351
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=2.2e-31 Score=304.34 Aligned_cols=272 Identities=22% Similarity=0.282 Sum_probs=200.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC-----CceE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD-----EHGF 903 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 903 (1119)
+|...+.||+|+||+||+|.+..+++.||||+++.. ...+.+|+.+++.++||||+++++++... ...|
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 566678999999999999999999999999987532 23466799999999999999999988644 3479
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||+. ++|.+++...+ .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 86 IVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 9999995 78988887654 489999999999999999999999 9999999999999999999999999999866
Q ss_pred cCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCc--eeeh------hhhhhc
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTD--IVTW------TRWKLQ 1054 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~--~~~~------~~~~~~ 1054 (1119)
.... .......++..|+|||.+.. ..++.++||||+||++|+|++|+.||......... .... ..+...
T Consensus 159 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 159 SEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred CCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 4321 12233467889999998764 46889999999999999999999998643110000 0000 000000
Q ss_pred ccccccccccc---cccC-CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcccccCCC
Q 001226 1055 ENHECICFLDR---EISF-WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF--LIKLNDKNEG 1115 (1119)
Q Consensus 1055 ~~~~~~~~~~~---~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~--L~~~~~~~~~ 1115 (1119)
........+.. .... ........+..+.+++.+|++.+|++|||++|++++ ++.+.+..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~ 303 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDE 303 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccC
Confidence 00000000000 0000 000011234568899999999999999999999999 7777665543
No 352
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=4.1e-31 Score=296.46 Aligned_cols=263 Identities=21% Similarity=0.267 Sum_probs=193.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
+|+..+.||+|++|.||+|.+..+++.||+|++... ...+.+|+.+++.++||||+++++++.++...|+||||
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEec
Confidence 466678999999999999999988999999988532 23577899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC-CCceEEEeccccccccCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS-ELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~vkl~DfGla~~~~~~~ 987 (1119)
++ +++.+++..... ...++..+..++.||+.|++|||+. +++||||+|+||+++. ++.+|++|||++.......
T Consensus 83 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 83 LD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred cc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 96 578888765442 2367888889999999999999999 9999999999999985 5679999999997653321
Q ss_pred CCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccc------cccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQEN------HECI 1060 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~ 1060 (1119)
.......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||......+.....+........ ....
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 158 --RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred --cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence 11223456889999998765 45789999999999999999999998643211100000000000000 0000
Q ss_pred ccccccccCCCch-----HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 CFLDREISFWDSD-----DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 ~~~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
... .....+... ....+..+.+++.+|++.+|++||++++++++
T Consensus 236 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 236 DYK-SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhh-hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 000000000 01124467899999999999999999999874
No 353
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=1.1e-30 Score=294.39 Aligned_cols=265 Identities=24% Similarity=0.269 Sum_probs=194.7
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCC------
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDE------ 900 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 900 (1119)
+.+|+..+.||+|+||.||+|.++.+++.||+|+++... ..+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 456778899999999999999999889999999885321 34668999999999999999999887654
Q ss_pred ----ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEe
Q 001226 901 ----HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGD 976 (1119)
Q Consensus 901 ----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~D 976 (1119)
..++|+||+++ ++.+.+.... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|
T Consensus 86 ~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 86 KDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999976 7777766542 2589999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhh-c
Q 001226 977 FGMSKLISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKL-Q 1054 (1119)
Q Consensus 977 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~-~ 1054 (1119)
||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... ............ .
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCC
Confidence 999986654321 12222356788999997764 4578999999999999999999999864311 000000000000 0
Q ss_pred cccccccc--------ccccc---cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1055 ENHECICF--------LDREI---SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1055 ~~~~~~~~--------~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.......+ .+... +.........+..+.+++.+||+.+|++||++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000000 00000 00000001124578999999999999999999999864
No 354
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=3.3e-31 Score=292.27 Aligned_cols=243 Identities=27% Similarity=0.387 Sum_probs=193.7
Q ss_pred eeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
||+|+||.||++.+..+++.||+|++.... ..+.+|+..+++++|||++++++.+..+...|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999999889999999985432 3577899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC------
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS------ 988 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~------ 988 (1119)
.+++...+ .+++..+..++.|+++|++|||+. +++||||+|+||++++++.++++|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99998754 489999999999999999999999 999999999999999999999999999875433211
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
........++..|+|||......++.++||||+|+++||+++|+.||...... . ..... ......
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~---~~~~~----------~~~~~~ 219 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--E---IFQNI----------LNGKIE 219 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--H---HHHHH----------hcCCcC
Confidence 11223456788999999988888999999999999999999999998643210 0 00000 000000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
. ......+..+.+++.+|++.+|++|||+.++.+.++
T Consensus 220 ~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 220 W--PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred C--CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 001112457789999999999999999955555443
No 355
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=2e-30 Score=289.94 Aligned_cols=260 Identities=25% Similarity=0.270 Sum_probs=192.9
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhc---CCCCEEEEeeeeecCCc-----e
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLV---RHRNILRIVGSCTKDEH-----G 902 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~-----~ 902 (1119)
+..+.||+|+||.||+|+++.+++.||+|+++... ..+.+|+.+++++ +|||++++++++...+. .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 81 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL 81 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence 45678999999999999999889999999986321 2355677777666 59999999999987766 8
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
+++|||++ ++|.+++..... ..+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+|++|||.+..
T Consensus 82 ~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 82 TLVFEHVD-QDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred EEEehhcc-cCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 99999996 489998876543 2589999999999999999999999 999999999999999999999999999877
Q ss_pred ccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhh-hcccccc--
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWK-LQENHEC-- 1059 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~-- 1059 (1119)
..... ......++..|+|||.+.+..++.++|+||+||++|||++|+.||......+ ......... .......
T Consensus 157 ~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHcCCCChHhcCC
Confidence 64321 1123357889999999998889999999999999999999998886432110 000000000 0000000
Q ss_pred -----ccccccccc-CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1060 -----ICFLDREIS-FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1060 -----~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......... ............+.+++.+||+.||++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000000000 0001112334677899999999999999999999864
No 356
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=1.1e-31 Score=317.56 Aligned_cols=246 Identities=26% Similarity=0.389 Sum_probs=181.4
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeec-------------
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTK------------- 898 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~------------- 898 (1119)
++.+.||+||||.||+++.+-+|+.||||++.-. ...+.+|++.+.+++|||||+++..+.+
T Consensus 482 EEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~ 561 (1351)
T KOG1035|consen 482 EELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS 561 (1351)
T ss_pred HHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence 3347799999999999999999999999998533 2347789999999999999999754310
Q ss_pred ------------------------------------------C-------------------------------------
Q 001226 899 ------------------------------------------D------------------------------------- 899 (1119)
Q Consensus 899 ------------------------------------------~------------------------------------- 899 (1119)
.
T Consensus 562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~ 641 (1351)
T KOG1035|consen 562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI 641 (1351)
T ss_pred chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence 0
Q ss_pred ---------------------------CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 001226 900 ---------------------------EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVP 952 (1119)
Q Consensus 900 ---------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 952 (1119)
...||-||||+..++.++++++... -.....++++++|++|++|+|++
T Consensus 642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYIH~~--- 716 (1351)
T KOG1035|consen 642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYIHDQ--- 716 (1351)
T ss_pred cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHHHhC---
Confidence 1136778888887777777765421 14668899999999999999999
Q ss_pred CeEecCCCCCCeEeCCCCceEEEecccccccc----------------CCCCCCcccccccCCCcccccccCCC---CCC
Q 001226 953 QIIHRDIKSDNILLDSELEPKIGDFGMSKLIS----------------DSHSSSTRSAIVGSLGYIAPENAYST---RLT 1013 (1119)
Q Consensus 953 ~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~ 1013 (1119)
|+|||||||.||++++++.|||+|||+|+... .+......+..+||.-|+|||.+.+. .|+
T Consensus 717 giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn 796 (1351)
T KOG1035|consen 717 GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYN 796 (1351)
T ss_pred ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccccc
Confidence 99999999999999999999999999998721 00111234567899999999987654 599
Q ss_pred CcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCC
Q 001226 1014 EKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVA 1093 (1119)
Q Consensus 1014 ~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 1093 (1119)
.|+|+||+|||++||+ .||....+....+. ..-+..++............-.++++++++.||
T Consensus 797 ~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~--------------~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 797 SKIDMYSLGIVLFEML---YPFGTSMERASILT--------------NLRKGSIPEPADFFDPEHPEEASLIRWLLSHDP 859 (1351)
T ss_pred chhhhHHHHHHHHHHh---ccCCchHHHHHHHH--------------hcccCCCCCCcccccccchHHHHHHHHHhcCCC
Confidence 9999999999999998 45543211100000 011111111101111122233689999999999
Q ss_pred CCCCCHHHHHH
Q 001226 1094 DMRPSMREVVG 1104 (1119)
Q Consensus 1094 ~~RPs~~ell~ 1104 (1119)
++||||.|++.
T Consensus 860 ~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 860 SKRPTATELLN 870 (1351)
T ss_pred ccCCCHHHHhh
Confidence 99999999986
No 357
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=5.4e-31 Score=289.10 Aligned_cols=245 Identities=25% Similarity=0.369 Sum_probs=199.7
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||.||++.+..+++.+|+|.+... ...+.+|+.+++.++|+||+++.+++.++...++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 45567899999999999999988999999988532 234667999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 910 PGGTLFNVLHQNEP-RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++++|.+++..... ...+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+|++|||++......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-- 156 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN-- 156 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC--
Confidence 99999999876321 23588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
......+++.|+|||...+..++.++|+||+|+++|||++|+.||...... ...... ......
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~----------~~~~~~ 219 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DLRYKV----------QRGKYP 219 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH----------hcCCCC
Confidence 122345788999999998888999999999999999999999998643110 000000 000000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
........++.+++.+|++.+|++||++.+++++
T Consensus 220 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 220 ---PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ---CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1112345678999999999999999999999875
No 358
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=1.7e-30 Score=294.50 Aligned_cols=256 Identities=21% Similarity=0.203 Sum_probs=187.7
Q ss_pred CCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHHHhhc
Q 001226 846 KHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLFNVLH 919 (1119)
Q Consensus 846 ~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~ 919 (1119)
++|.||.++...+++.||+|+++.. ...+..|+..++.++||||+++++++.+++..+++|||++++++.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 4456666666778999999998543 2357889999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC-----CCcccc
Q 001226 920 QNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS-----SSTRSA 994 (1119)
Q Consensus 920 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~-----~~~~~~ 994 (1119)
.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||.+........ ......
T Consensus 92 ~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
T cd08216 92 THFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKS 167 (314)
T ss_pred Hhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccc
Confidence 6542 2478889999999999999999999 999999999999999999999999998875532211 112233
Q ss_pred cccCCCcccccccCC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhh--------hhcc-ccccc---
Q 001226 995 IVGSLGYIAPENAYS--TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRW--------KLQE-NHECI--- 1060 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~--------~~~~-~~~~~--- 1060 (1119)
..++..|+|||.+.+ ..++.++||||+||++|||++|+.||................ .... .....
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
T cd08216 168 SVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSR 247 (314)
T ss_pred ccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccc
Confidence 457788999998865 357899999999999999999999997432111000000000 0000 00000
Q ss_pred -ccccccc--cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 -CFLDREI--SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 -~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...++.. ............++.+++.+||+.+|++|||+++++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 248 SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000000 00111122344578899999999999999999999975
No 359
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.9e-31 Score=316.04 Aligned_cols=268 Identities=18% Similarity=0.234 Sum_probs=185.8
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCce-EEEEE------------------eccc---ccccHHHHHHHHhhcCCCCEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRK-HWAVK------------------KLNR---SETNFDVEIRTLSLVRHRNIL 890 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~-~vavK------------------~~~~---~~~~~~~E~~~l~~l~h~niv 890 (1119)
+.+|...++||+|+||+||++..+.... .+++| .++. ....+.+|+.+++.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 3578888999999999999987654221 11211 1111 123477899999999999999
Q ss_pred EEeeeeecCCceEEEEeccCCCCHHHhhccCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC
Q 001226 891 RIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEP--RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS 968 (1119)
Q Consensus 891 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 968 (1119)
++++++.+++..|+|+|++ ++++.+++..... ........+..++.|++.||+|||+. +||||||||+||+++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence 9999999999999999998 4677777654321 11234567788999999999999999 9999999999999999
Q ss_pred CCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC--cee
Q 001226 969 ELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT--DIV 1046 (1119)
Q Consensus 969 ~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~--~~~ 1046 (1119)
++.+||+|||+++....... .......||..|+|||++.+..++.++||||+||++|||++|..++........ ...
T Consensus 303 ~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 99999999999987654221 222345789999999999999999999999999999999998865432211111 000
Q ss_pred ehhhhhhcccc-------ccccccccc-ccCC-Cch-----HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1047 TWTRWKLQENH-------ECICFLDRE-ISFW-DSD-----DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1047 ~~~~~~~~~~~-------~~~~~~~~~-~~~~-~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
........... ....+++.. +... ... ......++.+++.+|++.||++|||++|++++
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000000000 000000000 0000 000 00112356778999999999999999999875
No 360
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-32 Score=318.46 Aligned_cols=248 Identities=24% Similarity=0.346 Sum_probs=200.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+|.+.++||+|+||.|..++++.+++.||+|++++ ...-|..|-.+|..-..+-|+.+..+|.++.+.|+|||
T Consensus 76 DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMd 155 (1317)
T KOG0612|consen 76 DFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMD 155 (1317)
T ss_pred hhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEe
Confidence 45566889999999999999999999999998853 23457888889988889999999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
||+||+|...+.... .++++-++.+...|+-|+.-+|+. |+|||||||+|||+|..|++|++|||.+-.+...
T Consensus 156 Y~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~~d- 228 (1317)
T KOG0612|consen 156 YMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD- 228 (1317)
T ss_pred cccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcCCC-
Confidence 999999999999877 488999999999999999999999 9999999999999999999999999998777643
Q ss_pred CCCcccccccCCCcccccccC----C-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAY----S-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
........+|||.|.+||++. + +.|++.+|.||+||++|||+.|..||+.. .-..++ ..+
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad----slveTY-----------~KI 293 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD----SLVETY-----------GKI 293 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH----HHHHHH-----------HHH
Confidence 233455679999999999764 3 67999999999999999999999999742 111111 112
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPS---MREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ell~~ 1105 (1119)
++..-...++.....+....++|.+.+. +|+.|.. ++++..|
T Consensus 294 m~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 294 MNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 2221111111223356677888888774 5667776 8888776
No 361
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=1.2e-30 Score=287.66 Aligned_cols=247 Identities=26% Similarity=0.360 Sum_probs=193.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc---------cccHHHHHHHHhhcCCCCEEEEeeeeecC--CceE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---------ETNFDVEIRTLSLVRHRNILRIVGSCTKD--EHGF 903 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 903 (1119)
.|..++.||+|+||.||+|.+..++..||+|.+... ...+.+|+.++++++||||+++++++.+. +..+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 456678999999999999999999999999986321 13577899999999999999999998664 4578
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+|+||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++++|||.++..
T Consensus 83 ~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 9999999999999987654 378889999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCC-CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 984 SDSHS-SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 984 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
..... ........++..|+|||...+..++.++|+||+||++||+++|+.||..... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~---------- 222 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAIFKIA---------- 222 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHHHHHH----------
Confidence 32111 1112234688999999999888889999999999999999999999864211 00000000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..... ...+......+.+++.+|++ +|.+||++.+++.|
T Consensus 223 -~~~~~--~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 223 -TQPTK--PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred -cCCCC--CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 00000 01112234568899999999 57999999998764
No 362
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=8.8e-31 Score=292.11 Aligned_cols=262 Identities=22% Similarity=0.301 Sum_probs=195.4
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|+..+.||+|+||+||+|....+++.||||++.... ....+|+..+++++ |||++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 345678999999999999999889999999885432 23456889999999 999999999999999999999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
+|++.+++.... ...+++..+..++.|++.++.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-- 153 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-- 153 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC--
Confidence 889999887654 23589999999999999999999998 99999999999999999999999999997664322
Q ss_pred CcccccccCCCcccccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceee--h----hhhhhccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAY-STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVT--W----TRWKLQENHECICF 1062 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~ 1062 (1119)
......++..|+|||.+. ...++.++|+||||+++|||++|+.||......+..... . ..............
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 122346788999999774 455789999999999999999999998643211100000 0 00000000000001
Q ss_pred ccccccCCCchH-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWDSDD-----QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
++.......... ...+.++.+++.+||+.+|++||+++|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 111111000000 0113578899999999999999999999864
No 363
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=5.5e-31 Score=300.78 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=194.9
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeec----CCceE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTK----DEHGF 903 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 903 (1119)
.+|+..+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 3566678899999999999999999999999988543 2346679999999999999999998753 34679
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||++ ++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||++...
T Consensus 85 lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 9999995 68998887654 389999999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCC--CcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhc------
Q 001226 984 SDSHSS--STRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQ------ 1054 (1119)
Q Consensus 984 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 1054 (1119)
...... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ . ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~-~-~~~~~~~g~~~~~~ 235 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ-L-KLILSVLGSPSEEV 235 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH-H-HHHHHHhCCChhHh
Confidence 432211 11223468899999998765 4688999999999999999999999964321100 0 00000000
Q ss_pred ----cccccccccc---cccc-CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1055 ----ENHECICFLD---REIS-FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1055 ----~~~~~~~~~~---~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.........+ .... .+.......+.++.+++.+|++.+|++||++++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000000000 0000 0000011235678999999999999999999999885
No 364
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.4e-31 Score=318.40 Aligned_cols=255 Identities=26% Similarity=0.436 Sum_probs=202.7
Q ss_pred hCCceeeecCCccEEEEEeCC-------CceEEEEEecccc-----cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceE
Q 001226 837 TEGRIIGKGKHGTVYRTLSNN-------SRKHWAVKKLNRS-----ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~-------~~~~vavK~~~~~-----~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 903 (1119)
..++.+|+|+||.|++|.... ....||||..+.. ...+..|+++|+.+ +|+||+.++|+|..++..+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~ 378 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY 378 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence 345699999999999987431 1467999998643 34678899999988 5999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCC---------C--C--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC
Q 001226 904 IVTEYMPGGTLFNVLHQNE---------P--R--LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL 970 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~---------~--~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 970 (1119)
+|+||++.|+|.++++..+ . . ..++......++.|||.|++||++. ++||||++++||+++++.
T Consensus 379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKNK 455 (609)
T ss_pred EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCCC
Confidence 9999999999999998876 0 0 1388899999999999999999999 999999999999999999
Q ss_pred ceEEEeccccccccCCCCCCcc-cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeeh
Q 001226 971 EPKIGDFGMSKLISDSHSSSTR-SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTW 1048 (1119)
Q Consensus 971 ~vkl~DfGla~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 1048 (1119)
.+||+|||+|+...+...+... +...-+..|||||.+....|+.++|||||||++||+++ |..||.... ...++..
T Consensus 456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-~~~~l~~- 533 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-PTEELLE- 533 (609)
T ss_pred EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-cHHHHHH-
Confidence 9999999999977665444322 22125678999999999999999999999999999997 888886421 0111111
Q ss_pred hhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1049 TRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
..+... +. ..+.....+++++|+.||+.+|++||++.++++.+++..+
T Consensus 534 ---~l~~G~----------r~--~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 534 ---FLKEGN----------RM--EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred ---HHhcCC----------CC--CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 111110 10 1122335678899999999999999999999999998543
No 365
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.1e-32 Score=270.07 Aligned_cols=267 Identities=21% Similarity=0.315 Sum_probs=195.4
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecc--cc----cccHHHHHHHHhhcCCCCEEEEeeeeec--------C
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLN--RS----ETNFDVEIRTLSLVRHRNILRIVGSCTK--------D 899 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~--~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 899 (1119)
-.|....+||+|.||.||+|+.+.+++.||+|+.- .. .....+|+++++.++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34455578999999999999999999999998651 11 2345789999999999999999998853 2
Q ss_pred CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccc
Q 001226 900 EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGM 979 (1119)
Q Consensus 900 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGl 979 (1119)
...|+|+.+|+. +|...+..... .++..++.+++.++..|+.|+|+. .|+|||+||.|++++.+|.+|++|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~v--r~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKV--RFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccc--cccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 457999999964 78888876643 488889999999999999999999 999999999999999999999999999
Q ss_pred cccccCCC--CCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC-c-------eeeh
Q 001226 980 SKLISDSH--SSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT-D-------IVTW 1048 (1119)
Q Consensus 980 a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-~-------~~~~ 1048 (1119)
++.+.... .......++.|.+|++||.+.+ ++|+++.|||+.|||+.||++|.+-+.+...... . ...-
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 97664332 2233456788999999998776 5699999999999999999999876654321100 0 0000
Q ss_pred hhhhhccccccccccccc-ccC-CCchHHH------HHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1049 TRWKLQENHECICFLDRE-ISF-WDSDDQL------KALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~------~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
..|.......+...+.-. +.. ....-.. ...+..+++.+++..||.+|+++++++.|-
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 111111111111111000 100 0000001 123678999999999999999999998763
No 366
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=2.9e-30 Score=295.25 Aligned_cols=260 Identities=22% Similarity=0.206 Sum_probs=191.6
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccccc------------------ccHHHHHHHHhhcCCCCEEEEeeeeecCC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------------------TNFDVEIRTLSLVRHRNILRIVGSCTKDE 900 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------------------~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 900 (1119)
.+.||+|+||+||+|.+..+++.||||+++... ..+.+|+.+++.++||||+++++++..++
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 467999999999999999889999999885321 13668999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccc
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMS 980 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla 980 (1119)
..++||||++ ++|.+++.... .+++.....++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred cEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccce
Confidence 9999999996 68999887543 488999999999999999999998 9999999999999999999999999998
Q ss_pred ccccCCCC------------CCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceee
Q 001226 981 KLISDSHS------------SSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVT 1047 (1119)
Q Consensus 981 ~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 1047 (1119)
........ ........++..|+|||.+.+. .++.++||||+||++|||++|+.||......+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i 246 (335)
T PTZ00024 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRI 246 (335)
T ss_pred eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 76541110 1111223467889999988764 4689999999999999999999998643211100000
Q ss_pred hhhhhhccccccccc--------ccccccC-CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1048 WTRWKLQENHECICF--------LDREISF-WDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1048 ~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
............... ....... ........+.++.+++.+|++.+|++||+++|++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 247 FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 000000000000000 0000000 000001124567899999999999999999999974
No 367
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=1.5e-30 Score=285.64 Aligned_cols=247 Identities=27% Similarity=0.363 Sum_probs=200.2
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
|...+.||+|+||.||++.+..++..||+|++... ...+.+|+++++.++|||++++.+.+..++..++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 45568899999999999999988999999998533 235778999999999999999999999999999999999
Q ss_pred CCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 910 PGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 910 ~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++++|.+++.... ....+++..+..++.++++|+.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 157 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV- 157 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc-
Confidence 9999999998753 123589999999999999999999999 99999999999999999999999999998665432
Q ss_pred CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.......+++.|+|||...+..++.++|+||+|+++|+|++|+.||..... . ...... ......
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~---~~~~~~----------~~~~~~ 221 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--L---ELALKI----------LKGQYP 221 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--H---HHHHHH----------hcCCCC
Confidence 122334678899999998888899999999999999999999999864311 0 000000 000000
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. .+...+..+.+++.+||+.+|++||++.+++++
T Consensus 222 ~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 222 P---IPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred C---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 011224567899999999999999999999874
No 368
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=5.3e-31 Score=293.33 Aligned_cols=246 Identities=28% Similarity=0.419 Sum_probs=200.0
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+|...+.||+|+||.||+|....+++.||+|++... ...+.+|+.++++++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 356678899999999999999989999999988542 245778999999998 999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||+++++|.+++...+ .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 82 EYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999998764 489999999999999999999998 9999999999999999999999999998866443
Q ss_pred CCC------------------CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeeh
Q 001226 987 HSS------------------STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTW 1048 (1119)
Q Consensus 987 ~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 1048 (1119)
... .......++..|+|||......++.++|+||+|+++|++++|+.||.... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~~ 231 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN----EYLTF 231 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc----HHHHH
Confidence 211 22234567889999999888889999999999999999999999987432 10000
Q ss_pred hhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCH----HHHHHH
Q 001226 1049 TRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSM----REVVGF 1105 (1119)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~----~ell~~ 1105 (1119)
.. ...... ..+...+..+.+++.+||+.+|++||++ ++++++
T Consensus 232 ~~-----------~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 232 QK-----------ILKLEY----SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HH-----------HHhcCC----CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 00 000000 0111224567899999999999999999 888764
No 369
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=6.7e-31 Score=299.96 Aligned_cols=271 Identities=26% Similarity=0.301 Sum_probs=203.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC-----ceE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE-----HGF 903 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 903 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++||||+++++++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 356678999999999999999988999999988542 235778999999999999999999988765 789
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||++ ++|.++++... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 58988887654 589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCC-CCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCcee--------ehhhhhh
Q 001226 984 SDSHS-SSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIV--------TWTRWKL 1053 (1119)
Q Consensus 984 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~--------~~~~~~~ 1053 (1119)
..... ........++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||........... ....+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 54321 0122334678899999998877 789999999999999999999999865421100000 0000000
Q ss_pred cccccccccccc---cc-cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHccccc
Q 001226 1054 QENHECICFLDR---EI-SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF--LIKLNDK 1112 (1119)
Q Consensus 1054 ~~~~~~~~~~~~---~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~--L~~~~~~ 1112 (1119)
.........+.. .. ..+.......+..+.+++.+||+.+|++||++++++++ ++++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 000000000000 00 00000011134578899999999999999999999997 6666654
No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=8e-31 Score=296.80 Aligned_cols=267 Identities=20% Similarity=0.238 Sum_probs=192.6
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC------
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE------ 900 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 900 (1119)
+.+|+..++||+|+||.||+|.++.+++.||+|++... ...+.+|+.+++.++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 45778889999999999999999999999999987422 234678999999999999999999875433
Q ss_pred --ceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 901 --HGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 901 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
..++||||+++ ++...+.... ..+++..+..++.|+++|++|||+. +++||||||+||++++++.++++|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence 45999999964 6777766543 2589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCC---------cccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeeh
Q 001226 979 MSKLISDSHSSS---------TRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTW 1048 (1119)
Q Consensus 979 la~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 1048 (1119)
+++......... ......+++.|+|||...+ ..++.++||||+||++|||++|+.||............+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 997654322111 1123456888999998765 457899999999999999999999986432110000000
Q ss_pred hhhhhc------ccccccccc----cccccCC-CchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1049 TRWKLQ------ENHECICFL----DREISFW-DSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1049 ~~~~~~------~~~~~~~~~----~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
...... ......... ....... ..........+.+++.+|++.+|++|||+.|++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000000 000000000 0000000 00001112467899999999999999999999864
No 371
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.7e-30 Score=290.76 Aligned_cols=248 Identities=24% Similarity=0.294 Sum_probs=192.7
Q ss_pred hhCCceeeecCCccEEEEEeC---CCceEEEEEecccc--------cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSN---NSRKHWAVKKLNRS--------ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~--------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 903 (1119)
|+..+.||+|+||.||+|... .+|+.||+|+++.. .+.+.+|+++++++ +|++|+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 455688999999999999874 36889999988532 24467899999999 5999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||+++++|.+++.... .+++..+..++.|+++|+.|||+. +++||||+|+||+++.++.+|++|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 82 LILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999997654 378889999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCCCcccccccCCCcccccccCCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAYST--RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
.... ........++..|+|||...+. .++.++||||+|+++|+|++|+.||..... ............
T Consensus 156 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~-------- 225 (290)
T cd05613 156 HEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRIL-------- 225 (290)
T ss_pred cccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhh--------
Confidence 4322 1222234688999999987653 467899999999999999999999863211 111111111000
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRP-----SMREVVGF 1105 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ell~~ 1105 (1119)
.... ..+......+.+++.+|++.+|++|| ++++++++
T Consensus 226 --~~~~----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 226 --KSEP----PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred --ccCC----CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0000 01112345678999999999999997 78888775
No 372
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=281.24 Aligned_cols=260 Identities=22% Similarity=0.291 Sum_probs=199.4
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc---ccccHHHHHHHHhhcC--CC----CEEEEeeeeecCCceEE
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR---SETNFDVEIRTLSLVR--HR----NILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~---~~~~~~~E~~~l~~l~--h~----niv~l~~~~~~~~~~~l 904 (1119)
.+|++.+.+|+|.||.|-++.+..++..||||+++. -.++...|+++++++. .| -+|.+.+||+..++.++
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCi 168 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICI 168 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEE
Confidence 367777889999999999999999999999999863 3455677999999993 22 47899999999999999
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC----------------
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS---------------- 968 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---------------- 968 (1119)
|+|.+ |-|+++++..+.. .+++...+..++.|+++++++||+. +++|.|+||+||++.+
T Consensus 169 vfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 169 VFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred EEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCcccee
Confidence 99998 7799999998764 4689999999999999999999999 9999999999999842
Q ss_pred ----CCceEEEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 001226 969 ----ELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTD 1044 (1119)
Q Consensus 969 ----~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 1044 (1119)
+..|+++|||.|+.... ..+..+.|..|+|||++.+-.++.++||||+|||++|+.+|..-|..-. +..+
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e-----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe-n~EH 317 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHE-----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE-NLEH 317 (415)
T ss_pred ccCCCcceEEEecCCcceecc-----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC-cHHH
Confidence 24589999999986543 2356788999999999999999999999999999999999998886532 1111
Q ss_pred eeehhhhhhcc-ccc------cccccc------------c--------c--ccCCCchHHHHHHHHHHHHHHccccCCCC
Q 001226 1045 IVTWTRWKLQE-NHE------CICFLD------------R--------E--ISFWDSDDQLKALRLLELALECTRQVADM 1095 (1119)
Q Consensus 1045 ~~~~~~~~~~~-~~~------~~~~~~------------~--------~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 1095 (1119)
++-+. ..... +.. ..+++. + . +.........+...+++++++|+..||.+
T Consensus 318 LaMMe-rIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 318 LAMME-RILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHH-HhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 11100 00000 000 000000 0 0 00000112234567999999999999999
Q ss_pred CCCHHHHHHH
Q 001226 1096 RPSMREVVGF 1105 (1119)
Q Consensus 1096 RPs~~ell~~ 1105 (1119)
|+|++|++.|
T Consensus 397 RiTl~EAL~H 406 (415)
T KOG0671|consen 397 RITLREALSH 406 (415)
T ss_pred cccHHHHhcC
Confidence 9999999875
No 373
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=6.5e-31 Score=301.02 Aligned_cols=264 Identities=22% Similarity=0.293 Sum_probs=193.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC------ce
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE------HG 902 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 902 (1119)
+|...+.||+|+||.||+|.+..+++.||+|++.+. ...+.+|+.+++.++||||+++++++.... ..
T Consensus 16 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 95 (342)
T cd07879 16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDF 95 (342)
T ss_pred ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceE
Confidence 455668999999999999999988999999988542 134678999999999999999999886543 45
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
++|+||++ .++.++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.
T Consensus 96 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 96 YLVMPYMQ-TDLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred EEEecccc-cCHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 89999996 46766542 1378899999999999999999999 999999999999999999999999999875
Q ss_pred ccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccc--
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHEC-- 1059 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 1059 (1119)
... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ................
T Consensus 167 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 167 ADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 432 1223457889999998766 468899999999999999999999997532100 0000000000000000
Q ss_pred -------cccccccccCCCch----HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcccccC
Q 001226 1060 -------ICFLDREISFWDSD----DQLKALRLLELALECTRQVADMRPSMREVVGF--LIKLNDKN 1113 (1119)
Q Consensus 1060 -------~~~~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~--L~~~~~~~ 1113 (1119)
.............. ....+..+.+++.+||+.||++||++++++++ ++.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDAD 307 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence 00000000000000 01123467899999999999999999999977 77776653
No 374
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-31 Score=294.41 Aligned_cols=240 Identities=23% Similarity=0.275 Sum_probs=196.8
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCCCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPGGT 913 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~gs 913 (1119)
.|+....+|.|+|+.|-.+.+..+++..++|++.+...+..+|+.++... .|||++++.+.+.++.+.|+|||.+.|+-
T Consensus 323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~e 402 (612)
T KOG0603|consen 323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGE 402 (612)
T ss_pred hhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccH
Confidence 34445669999999999999999999999999988877778888777666 69999999999999999999999999998
Q ss_pred HHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEe-CCCCceEEEeccccccccCCCCCCcc
Q 001226 914 LFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILL-DSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 914 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill-~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
+.+.+...+. .. ..+..|+.+|+.|+.|||++ ||||||+||+|||+ ++.++++++|||.++..... .
T Consensus 403 ll~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~ 470 (612)
T KOG0603|consen 403 LLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----C 470 (612)
T ss_pred HHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh-----h
Confidence 8777765542 22 67788999999999999998 99999999999999 68899999999999876543 2
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
...+-|..|.|||+.....|++++|+||+|+++|+|++|+.||.....+ .....+.. . + .
T Consensus 471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~--~---------~------~ 530 (612)
T KOG0603|consen 471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQ--M---------P------K 530 (612)
T ss_pred cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhc--C---------C------c
Confidence 2335688999999999999999999999999999999999999753222 11111100 0 0 0
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
.....+....+++.+||+.||++||+|.++.++=
T Consensus 531 ~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 531 FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred cccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 1133455778999999999999999999998763
No 375
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=3.4e-30 Score=290.69 Aligned_cols=245 Identities=27% Similarity=0.383 Sum_probs=192.9
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|+..+.||+|+||.||+|.+..++..||+|.+... ..++.+|+.+++.++|+|++++++++..+...++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 55557899999999999999988999999987521 12466799999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+. |++.+++..... .+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++.....
T Consensus 97 ~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~--- 167 (308)
T cd06634 97 CL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 167 (308)
T ss_pred cC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC---
Confidence 96 688887765432 478899999999999999999998 999999999999999999999999999876532
Q ss_pred CCcccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
.....++..|+|||.+. ...++.++||||+||++|||++|+.||........ .. ... ..
T Consensus 168 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~---~~~-----------~~ 229 (308)
T cd06634 168 ---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LY---HIA-----------QN 229 (308)
T ss_pred ---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-HH---HHh-----------hc
Confidence 12345788999999864 35678899999999999999999999854211000 00 000 00
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
.... ......+..+.+++.+||+.+|++||++++++++-.-.
T Consensus 230 ~~~~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 230 ESPA--LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred CCCC--cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence 0000 00112345678999999999999999999999875433
No 376
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=2.2e-30 Score=290.76 Aligned_cols=251 Identities=25% Similarity=0.342 Sum_probs=191.1
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 906 (1119)
+..|+..+.||+|+||.||+|.+..+++.||||.++... ..+..|+..+.+.. ||||+++++++.++...|+||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 345677789999999999999999889999999986422 23455666666664 999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||++ +++.+++..... .+++..+..++.|++.|++|||+.+ +|+||||+|+||++++++.+||+|||.+......
T Consensus 94 e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9985 577777655332 5889999999999999999999732 8999999999999999999999999998765432
Q ss_pred CCCCcccccccCCCcccccccCCCC----CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTR----LTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
.. .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.....+ . ..........
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~-~~~~~~~~~~------ 235 (296)
T cd06618 169 KA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---F-EVLTKILQEE------ 235 (296)
T ss_pred Cc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---H-HHHHHHhcCC------
Confidence 21 12235788999999876543 788999999999999999999998642111 0 0000000000
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
.+... .....+.++.+++.+||+.+|++||++++++++-
T Consensus 236 -~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 236 -PPSLP----PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred -CCCCC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 00000 0012244678999999999999999999998873
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.1e-30 Score=319.16 Aligned_cols=143 Identities=31% Similarity=0.464 Sum_probs=130.3
Q ss_pred HHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 833 VIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 833 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
+.+|+..++||+|+||.||+|.+..+++.||||+++... ..+..|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 346777899999999999999999999999999986432 4578899999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccc
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSK 981 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~ 981 (1119)
|||+++++|.+++.... .+++..++.++.||+.||+|||.. +|+||||||+||+++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997654 378889999999999999999998 99999999999999999999999999986
No 378
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=7.5e-30 Score=288.48 Aligned_cols=241 Identities=27% Similarity=0.365 Sum_probs=190.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
|...+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++|||++++++++.++...|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 44557899999999999999988999999988532 13467899999999999999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
++ +++.+++..... .+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.+|++|||.+.....
T Consensus 103 ~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 95 578777765432 488999999999999999999999 999999999999999999999999998864321
Q ss_pred CCcccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 989 SSTRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 989 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
.....++..|+|||.+. ...++.++||||+||++|||++|..||...... . ........ ...
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--~---~~~~~~~~--~~~----- 238 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--S---ALYHIAQN--DSP----- 238 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--H---HHHHHHhc--CCC-----
Confidence 22346788999999874 456888999999999999999999998643110 0 00000000 000
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
... ....+..+.+++.+|++.+|++||++.+++++
T Consensus 239 ~~~-----~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 239 TLQ-----SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCC-----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 01123357899999999999999999999975
No 379
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=1.9e-30 Score=285.48 Aligned_cols=247 Identities=26% Similarity=0.348 Sum_probs=193.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc---------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR---------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 905 (1119)
+|...+.||+|+||.||++.+...+..+++|+.+. ...++..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 45667899999999999999887766666666542 112356789999999999999999999999999999
Q ss_pred EeccCCCCHHHhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 906 TEYMPGGTLFNVLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
|||+++++|.+++.... ....+++..+..++.|+++|+.|||+. +++|+|++|+||+++. +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999887532 234589999999999999999999998 9999999999999975 569999999987664
Q ss_pred CCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
... .......+++.|+|||...+..++.++|+||+|+++|+|++|..||.... ........ ..
T Consensus 157 ~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~----------~~ 219 (260)
T cd08222 157 GSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRI----------VE 219 (260)
T ss_pred CCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHH----------Hc
Confidence 322 12223457889999999888888999999999999999999999985321 11100000 00
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.... ..+...+.++.+++.+|++.+|++||++.|++++
T Consensus 220 ~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 220 GPTP---SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCC---CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 0000 1112344578899999999999999999999875
No 380
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.8e-30 Score=297.43 Aligned_cols=263 Identities=22% Similarity=0.275 Sum_probs=189.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhcCCCCEEEEeeeeecC-----------
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLVRHRNILRIVGSCTKD----------- 899 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~----------- 899 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++||||+++++++...
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSL 85 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccc
Confidence 566778999999999999999999999999988542 23477899999999999999999876543
Q ss_pred ---CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC-CCceEEE
Q 001226 900 ---EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS-ELEPKIG 975 (1119)
Q Consensus 900 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~vkl~ 975 (1119)
...++||||++ ++|.+++... .+++..+..++.|++.|+.|||+. +++||||||+||+++. ++.+|++
T Consensus 86 ~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 86 TELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEEC
Confidence 34689999997 5898888643 378999999999999999999998 9999999999999985 5578999
Q ss_pred eccccccccCCCCC-CcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhh
Q 001226 976 DFGMSKLISDSHSS-STRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKL 1053 (1119)
Q Consensus 976 DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 1053 (1119)
|||.++........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..................
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99998765332111 11123357889999997654 56788999999999999999999999643211100000000000
Q ss_pred ccc-------ccccccccccccCC-Cch---HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1054 QEN-------HECICFLDREISFW-DSD---DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1054 ~~~-------~~~~~~~~~~~~~~-~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
... ......+....... ... ....+.++.+++.+|++.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000 00000000000000 000 01133567899999999999999999999864
No 381
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=2.4e-30 Score=289.27 Aligned_cols=252 Identities=24% Similarity=0.274 Sum_probs=194.1
Q ss_pred hhCCceeeecCCccEEEEEeC---CCceEEEEEecccc--------cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSN---NSRKHWAVKKLNRS--------ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~--------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 903 (1119)
|+..+.||+|+||.||++... .++..||||+++.. ...+.+|+.+++++ +||+|+++.+.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 455688999999999998854 35688999988532 23467899999999 5999999999999999999
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||+++++|.+++.... .+++..+..++.|+++|+.|||+. +++||||+|+||+++.++.++++|||+++..
T Consensus 82 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 82 LILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999987643 488899999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCCCcccccccCCCcccccccCCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAYSTR--LTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
..... .......++..|+|||...+.. .+.++||||+|+++|||++|..||...... ..........
T Consensus 156 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~--------- 224 (288)
T cd05583 156 LAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEISRRI--------- 224 (288)
T ss_pred ccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHHHHH---------
Confidence 43221 1122345788999999876654 688999999999999999999998532111 0000000000
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKL 1109 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~ 1109 (1119)
..... ..+...+..+.+++.+||+.+|++|||++++.+.++..
T Consensus 225 -~~~~~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 225 -LKSKP----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred -HccCC----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 00000 01112334678999999999999999988887766543
No 382
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.1e-30 Score=296.99 Aligned_cols=257 Identities=24% Similarity=0.305 Sum_probs=189.9
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC------Cce
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD------EHG 902 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 902 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|+++.. ...+.+|+.++++++||||+++++++... ...
T Consensus 18 ~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (345)
T cd07877 18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 97 (345)
T ss_pred ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccE
Confidence 566678999999999999999888999999998643 23466799999999999999999987543 346
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
+++++++ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||||+||++++++.+|++|||+++.
T Consensus 98 ~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~~ 169 (345)
T cd07877 98 YLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 169 (345)
T ss_pred EEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEeccccccc
Confidence 7888887 78998887643 388999999999999999999999 999999999999999999999999999875
Q ss_pred ccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccc-
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECI- 1060 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 1060 (1119)
... ......++..|+|||...+ ..++.++||||+||++|||++|+.||....... .................
T Consensus 170 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 243 (345)
T cd07877 170 TDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLK 243 (345)
T ss_pred ccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHh
Confidence 432 1223467889999998765 567889999999999999999999985432110 00000000000000000
Q ss_pred --------cc---ccccccCCC-chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1061 --------CF---LDREISFWD-SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1061 --------~~---~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.+ +........ .........+.+++.+|++.+|++||++.+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 244 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred hcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00 000000000 0000123467899999999999999999999876
No 383
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=3.5e-30 Score=281.55 Aligned_cols=236 Identities=28% Similarity=0.373 Sum_probs=192.3
Q ss_pred eeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
||+|+||.||++.+..+++.||+|+++.. ...+..|+.+++.++|||++++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 68999999999999888999999988543 23578899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSA 994 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~ 994 (1119)
.+++.... .+++..+..++.|+++|+.|+|+. +++|+||+|+||+++.++.++++|||.+....... .....
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~ 152 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNT 152 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccC
Confidence 99998654 488999999999999999999998 99999999999999999999999999987664321 12234
Q ss_pred cccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 995 IVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 995 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
..++..|+|||...+...+.++|+||+|+++||+++|+.||..... ......... .... .+
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~----------~~~~----~~ 213 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILK----------DPLR----FP 213 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhc----------CCCC----CC
Confidence 5678899999998888889999999999999999999999864311 111111000 0111 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCH---HHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRPSM---REVVG 1104 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs~---~ell~ 1104 (1119)
...+..+.+++.+|+..||++||++ +++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 1124567899999999999999999 55544
No 384
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=3.7e-30 Score=286.94 Aligned_cols=258 Identities=23% Similarity=0.287 Sum_probs=196.1
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccccc------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+..+.||+|+||.||+|....+++.||+|++.... ..+..|+.+++.++|+|++++++++.+.+..++||||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 34577999999999999999999999999886431 346679999999999999999999999999999999997
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||.+........
T Consensus 82 -~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 82 -MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred -cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 58999998763 2489999999999999999999999 999999999999999999999999999876643221
Q ss_pred cccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCc--ee------ehhhhhhcccccccc
Q 001226 991 TRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTD--IV------TWTRWKLQENHECIC 1061 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~--~~------~~~~~~~~~~~~~~~ 1061 (1119)
......++..|+|||.+.+. .++.++||||+||++||+++|+.||......... .. ....|... ....
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 230 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV--TKLP- 230 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh--cccc-
Confidence 22234567789999988766 7899999999999999999999998643210000 00 00000000 0000
Q ss_pred cccccccCCCchH-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1062 FLDREISFWDSDD-----QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+.....+.... ......+.+++.+|++.+|++||++++++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0111111111110 1124578999999999999999999999864
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-31 Score=277.82 Aligned_cols=253 Identities=25% Similarity=0.333 Sum_probs=195.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----------ccHHHHHHHHhhcCCCCEEEEeeeeec-CCce
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----------TNFDVEIRTLSLVRHRNILRIVGSCTK-DEHG 902 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 902 (1119)
+|-...+||+|+|+.||+|.+....++||||+-...+ ....+|.++-+.+.||.||++++++.- .+..
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 3444478999999999999999889999999763211 124568888899999999999999964 5677
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC---CCceEEEeccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS---ELEPKIGDFGM 979 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~vkl~DfGl 979 (1119)
|-|+|||+|.+|.-|++.++ .+++++++.|+.||+.|+.||.+. .++|||-|+||.||++-. -|.+||.|||+
T Consensus 544 CTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred eeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 99999999999999999876 489999999999999999999987 678999999999999954 47899999999
Q ss_pred cccccCCCCCC-----cccccccCCCcccccccCC----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhh
Q 001226 980 SKLISDSHSSS-----TRSAIVGSLGYIAPENAYS----TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTR 1050 (1119)
Q Consensus 980 a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 1050 (1119)
++.+.+..+.. ..+...||++|++||.+.- ...+.++||||+||++|..+.|+.||..... ..++....
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs-QQdILqeN- 697 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS-QQDILQEN- 697 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh-HHHHHhhh-
Confidence 99887643331 3356789999999997753 3468899999999999999999999974311 11111111
Q ss_pred hhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 001226 1051 WKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVG 1104 (1119)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~ 1104 (1119)
.+...- .. .+...+..+.+..++|++|+++--+.|....++..
T Consensus 698 -------TIlkAt--EV--qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 698 -------TILKAT--EV--QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -------chhcce--ec--cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 000000 00 01112233456789999999999999988887754
No 386
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=8.7e-30 Score=289.57 Aligned_cols=263 Identities=22% Similarity=0.272 Sum_probs=195.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcCCCCEEEEeeeeec-CCceEEEEe
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVRHRNILRIVGSCTK-DEHGFIVTE 907 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV~e 907 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|++.. ....+..|+.+++.++||||+++.+++.. ....++|+|
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence 56677899999999999999999999999998743 22457789999999999999999998865 557899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+ +++|.++++.. .+++..+..++.|+++|++|||+. +++||||+|+||++++++.++++|||.+......
T Consensus 91 ~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~- 161 (328)
T cd07856 91 LL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQ- 161 (328)
T ss_pred hh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCCC-
Confidence 98 56898888643 377888889999999999999999 9999999999999999999999999998754321
Q ss_pred CCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhh--------hhc-ccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRW--------KLQ-ENH 1057 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~--------~~~-~~~ 1057 (1119)
.....++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ....... ... ...
T Consensus 162 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 162 ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQ-FSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred ----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhccch
Confidence 123456889999998765 5689999999999999999999999864321000 0000000 000 000
Q ss_pred cccccccccccC--CCch---HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHccccc
Q 001226 1058 ECICFLDREISF--WDSD---DQLKALRLLELALECTRQVADMRPSMREVVGF--LIKLNDK 1112 (1119)
Q Consensus 1058 ~~~~~~~~~~~~--~~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~--L~~~~~~ 1112 (1119)
....++. .... .... ....+..+.+++.+|++.+|++||++++++.+ +++..+.
T Consensus 237 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 237 NTLRFVQ-SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred hhHHHHh-hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 0000000 0000 0000 01124578899999999999999999999987 5544444
No 387
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=4.7e-30 Score=277.85 Aligned_cols=220 Identities=22% Similarity=0.218 Sum_probs=178.4
Q ss_pred cCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHHHhhccCCCC
Q 001226 845 GKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPR 924 (1119)
Q Consensus 845 G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~ 924 (1119)
|.||.||++++..+++.||+|+++... .+..|...+....|||++++++++.+....++||||+++|+|.+++....
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-- 80 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL-- 80 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc--
Confidence 899999999999999999999986543 34456666666679999999999999999999999999999999987654
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCCcccc
Q 001226 925 LVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAP 1004 (1119)
Q Consensus 925 ~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aP 1004 (1119)
.+++..+..++.|+++|+.|+|+. +++||||||+||+++.++.++++|||.+...... .....++..|+||
T Consensus 81 -~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aP 151 (237)
T cd05576 81 -NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAP 151 (237)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCC
Confidence 388999999999999999999998 9999999999999999999999999987655431 1223456789999
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHH
Q 001226 1005 ENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLEL 1084 (1119)
Q Consensus 1005 E~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 1084 (1119)
|......++.++||||+|+++|||++|+.|+......... .....++ ...+..+.++
T Consensus 152 E~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~-----------------~~~~~~~------~~~~~~~~~l 208 (237)
T cd05576 152 EVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINT-----------------HTTLNIP------EWVSEEARSL 208 (237)
T ss_pred cccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhccc-----------------ccccCCc------ccCCHHHHHH
Confidence 9988888899999999999999999999887532100000 0000011 1123467899
Q ss_pred HHHccccCCCCCCCH
Q 001226 1085 ALECTRQVADMRPSM 1099 (1119)
Q Consensus 1085 ~~~cl~~dP~~RPs~ 1099 (1119)
+.+|++.||++||++
T Consensus 209 i~~~l~~dp~~R~~~ 223 (237)
T cd05576 209 LQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHccCCHHHhcCC
Confidence 999999999999996
No 388
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=272.54 Aligned_cols=256 Identities=25% Similarity=0.350 Sum_probs=192.9
Q ss_pred CCHHHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-----ccccHHHHHHHHhhc-CCCCEEEEeeeeecCCc
Q 001226 828 LRYEDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-----SETNFDVEIRTLSLV-RHRNILRIVGSCTKDEH 901 (1119)
Q Consensus 828 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-----~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 901 (1119)
|+-+++++. ..||.|+||+|+|-.++.+|+..|||+++. +..++..|.....+- ..||||+++|++..++.
T Consensus 61 F~~~~Lqdl---g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd 137 (361)
T KOG1006|consen 61 FTSDNLQDL---GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD 137 (361)
T ss_pred cccchHHHH---HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc
Confidence 444444433 459999999999999999999999999853 334566666655443 69999999999999999
Q ss_pred eEEEEeccCCCCHHHhh---ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecc
Q 001226 902 GFIVTEYMPGGTLFNVL---HQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFG 978 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfG 978 (1119)
.|+.||.| ..++..+- +..+ +..+++.-.-.|....+.||.||.+.. .|+|||+||+|||++..|.||++|||
T Consensus 138 cWiCMELM-d~SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 138 CWICMELM-DISLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred eeeeHHHH-hhhHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeeccc
Confidence 99999999 45654333 2222 235888888888888899999999876 89999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccCCCcccccccCC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccc
Q 001226 979 MSKLISDSHSSSTRSAIVGSLGYIAPENAYS--TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQEN 1056 (1119)
Q Consensus 979 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1056 (1119)
.+..+.+ ....+.-+|...|||||.+.. ..|+-++||||+|+++||+.||..||........++...+.
T Consensus 214 IcGqLv~---SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~------ 284 (361)
T KOG1006|consen 214 ICGQLVD---SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI------ 284 (361)
T ss_pred chHhHHH---HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc------
Confidence 9876643 234455678899999998764 34889999999999999999999999764221111111110
Q ss_pred ccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1057 HECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
-|+..-............+..++..|+.+|-..||...++.++
T Consensus 285 ------gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 285 ------GDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ------CCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 1111111222234456678999999999999999999998764
No 389
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=6.3e-30 Score=292.78 Aligned_cols=260 Identities=23% Similarity=0.318 Sum_probs=192.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCC------ce
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDE------HG 902 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 902 (1119)
+|+..+.||+|+||.||+|.+..+++.||||++... ...+.+|+.++++++||||+++++++..+. ..
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF 95 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence 566778999999999999999989999999988532 134678999999999999999999887553 35
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
++||||+ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||++..
T Consensus 96 ~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 96 YLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred EEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 8999999 77998887643 388999999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccc--
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHEC-- 1059 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 1059 (1119)
.... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||........ ..............+
T Consensus 168 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 241 (343)
T cd07880 168 TDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMKVTGTPSKEFVQ 241 (343)
T ss_pred cccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHH
Confidence 5331 123456889999998765 4578999999999999999999999864321100 000000000000000
Q ss_pred -------cccccccccCCCc-----hHHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHcc
Q 001226 1060 -------ICFLDREISFWDS-----DDQLKALRLLELALECTRQVADMRPSMREVVG--FLIKL 1109 (1119)
Q Consensus 1060 -------~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~--~L~~~ 1109 (1119)
..... .+..... ........+.+++.+|++.||++|||+.++++ .++.+
T Consensus 242 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 242 KLQSEDAKNYVK-KLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred hhcchhHHHHHH-hccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 00000 0000000 00122345789999999999999999999994 34444
No 390
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=7.1e-30 Score=291.38 Aligned_cols=263 Identities=24% Similarity=0.249 Sum_probs=189.6
Q ss_pred hhCCceeeecCCccEEEEEeCCC--ceEEEEEecccc------cccHHHHHHHHhhc-CCCCEEEEeeeeec----CCce
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNS--RKHWAVKKLNRS------ETNFDVEIRTLSLV-RHRNILRIVGSCTK----DEHG 902 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~--~~~vavK~~~~~------~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~ 902 (1119)
|+..+.||+|+||.||++.+..+ +..||+|++... ...+.+|+.+++++ .||||+++++.+.. ....
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 45568899999999999999887 889999987532 23467799999998 59999999987543 2456
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
++++||++ ++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 82 ~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 82 YLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 88999985 68999887544 488999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCC--CcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC-----------ceeeh
Q 001226 983 ISDSHSS--STRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT-----------DIVTW 1048 (1119)
Q Consensus 983 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-----------~~~~~ 1048 (1119)
....... .......++..|+|||...+ ..++.++|+||+||++|++++|+.||........ ....+
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 6432211 11233568999999998765 4688999999999999999999999864321000 00000
Q ss_pred hhhhhccccccccccccccc-CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1049 TRWKLQENHECICFLDREIS-FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.................... ............+.+++.+|++.+|++|||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000000000000000 0000001123568899999999999999999999865
No 391
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=2e-30 Score=297.10 Aligned_cols=257 Identities=24% Similarity=0.302 Sum_probs=192.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecCCc------e
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEH------G 902 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~ 902 (1119)
+|+..+.||+|+||.||+|.+..+++.||+|++... ...+.+|+.+++.++|||++++++++..++. .
T Consensus 16 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07851 16 RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDV 95 (343)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccE
Confidence 456678999999999999999999999999988532 1345679999999999999999998876554 8
Q ss_pred EEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 903 FIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 903 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
++|+||+ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||+|+||+++.++.++++|||.+..
T Consensus 96 ~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 96 YLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred EEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccc
Confidence 9999999 67999988753 489999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCCcccccccCCCcccccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhh-c------
Q 001226 983 ISDSHSSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKL-Q------ 1054 (1119)
Q Consensus 983 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~-~------ 1054 (1119)
.... .....++..|+|||...+ ..++.++||||+||++||+++|+.||........ ......... .
T Consensus 168 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~ 241 (343)
T cd07851 168 TDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ-LKRIMNLVGTPDEELLQ 241 (343)
T ss_pred cccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCCHHHHh
Confidence 5432 223457889999998765 4678999999999999999999999864321100 000000000 0
Q ss_pred --ccccccccccccccCCC----chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1055 --ENHECICFLDREISFWD----SDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1055 --~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
.......++........ ......+..+.+++.+|++.+|++|||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 242 KISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00000000000000000 0001125678899999999999999999999875
No 392
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=5.4e-30 Score=307.18 Aligned_cols=261 Identities=21% Similarity=0.233 Sum_probs=169.5
Q ss_pred HHhhCCceeeecCCccEEEEEeCCC----ceEEEEEecccccccHHHHHHHHhhc---CCCCEEEEeee------eecCC
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNS----RKHWAVKKLNRSETNFDVEIRTLSLV---RHRNILRIVGS------CTKDE 900 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~----~~~vavK~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~------~~~~~ 900 (1119)
.+|...++||+|+||.||+|.+..+ +..||+|++..... .|+.+..++ .+.++..++.. ...+.
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNERVRRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHHHHHhhchhhHHHHHHhhhcccccccCC
Confidence 4577789999999999999999988 89999998754321 122222222 22222222221 24556
Q ss_pred ceEEEEeccCCCCHHHhhccCCCCC-----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 001226 901 HGFIVTEYMPGGTLFNVLHQNEPRL-----------------VLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDN 963 (1119)
Q Consensus 901 ~~~lV~e~~~~gsL~~~l~~~~~~~-----------------~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 963 (1119)
..++||||+++++|.+++....... ......+..++.|++.||.|||+. +|+||||||+|
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~N 285 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQN 285 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHH
Confidence 7899999999999999987543110 112334567999999999999999 99999999999
Q ss_pred eEeCC-CCceEEEeccccccccCCCCCCcccccccCCCcccccccCCC----------------------CCCCcchHHH
Q 001226 964 ILLDS-ELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYST----------------------RLTEKSDVYS 1020 (1119)
Q Consensus 964 ill~~-~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sDvws 1020 (1119)
||++. ++.+||+|||+|+...... ........+++.|+|||.+... .++.++||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 99986 5789999999998654322 2223446789999999954321 2345679999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCC-----CceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCC
Q 001226 1021 YGVILFELLFRKMPVDPSFGED-----TDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADM 1095 (1119)
Q Consensus 1021 lG~vl~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 1095 (1119)
+||++|||+++..|++...... ........|....... ..+................++++.+|++.||++
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR----ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc----cchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 9999999999876643210000 0000011111000000 000000000000011224568999999999999
Q ss_pred CCCHHHHHHH
Q 001226 1096 RPSMREVVGF 1105 (1119)
Q Consensus 1096 RPs~~ell~~ 1105 (1119)
|||++|+++|
T Consensus 441 R~ta~e~L~H 450 (566)
T PLN03225 441 RISAKAALAH 450 (566)
T ss_pred CCCHHHHhCC
Confidence 9999999987
No 393
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-30 Score=268.36 Aligned_cols=235 Identities=26% Similarity=0.359 Sum_probs=189.9
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEe
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+....+||+|+||.|.+|+.+.+.+.+|||+++++. +-...|-+++..- +-|.++++...|..-++.|+|||
T Consensus 351 FnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVME 430 (683)
T KOG0696|consen 351 FNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVME 430 (683)
T ss_pred cceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEE
Confidence 334578999999999999999999999999997643 1133566666655 57889999999999999999999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
|+.||+|--.+.+.+. +.+..++.+|..||-||-+||++ ||+.||+|.+|||+|.+|++||+|||+++.-- .
T Consensus 431 yvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni--~ 502 (683)
T KOG0696|consen 431 YVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI--F 502 (683)
T ss_pred EecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc--c
Confidence 9999999877777653 66778889999999999999999 99999999999999999999999999987432 2
Q ss_pred CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
...+....+|||.|+|||.+.-.+|+.++|.|||||++|||+.|+.||++..+ ..+ +..+++...
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE--~el-------------F~aI~ehnv 567 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DEL-------------FQAIMEHNV 567 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH--HHH-------------HHHHHHccC
Confidence 23345568999999999999999999999999999999999999999986421 111 112222222
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCC
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRP 1097 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 1097 (1119)
..+...+.+..++....+...|.+|.
T Consensus 568 ----syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 568 ----SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ----cCcccccHHHHHHHHHHhhcCCcccc
Confidence 22334456677888899999999986
No 394
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=8e-29 Score=284.77 Aligned_cols=245 Identities=24% Similarity=0.359 Sum_probs=199.4
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEecccc---cccHHHHHHHHhhc-CCCCEEEEeeeeec-----CCceEEEEecc
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS---ETNFDVEIRTLSLV-RHRNILRIVGSCTK-----DEHGFIVTEYM 909 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~~~~~lV~e~~ 909 (1119)
.+.||.|.+|.||+++.+.+++.+|+|++... .++++.|.++++.. .|||++.++|++.. ++.+|+|||||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC 103 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFC 103 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeecc
Confidence 36799999999999999999999999988543 34577888888877 59999999998853 56889999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSS 989 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 989 (1119)
.+|+..|.++... ...+.|+.+..|++.++.|+.|||.. .++|||||-.||+++.++.||+.|||.+...+.. .
T Consensus 104 ~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT--~ 177 (953)
T KOG0587|consen 104 GGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST--V 177 (953)
T ss_pred CCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeeecc--c
Confidence 9999999998876 45699999999999999999999999 8999999999999999999999999999877542 2
Q ss_pred CcccccccCCCcccccccCC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYS-----TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLD 1064 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1119)
..+...+|||.|||||++.. ..|+.++|+||+|++..||.-|..|+..+.+... +....+
T Consensus 178 grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra-LF~IpR-------------- 242 (953)
T KOG0587|consen 178 GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPR-------------- 242 (953)
T ss_pred ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-hccCCC--------------
Confidence 34556789999999998753 3477899999999999999999999876533211 111111
Q ss_pred ccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1065 REISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1065 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+..-..+..-..++.++|..|+..|-++||++.++++|
T Consensus 243 -NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 243 -NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred -CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1111111123345678899999999999999999998865
No 395
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-28 Score=264.52 Aligned_cols=262 Identities=23% Similarity=0.341 Sum_probs=194.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc---ccHHHHHHHHhhcC--------CCCEEEEeeeeec----C
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---TNFDVEIRTLSLVR--------HRNILRIVGSCTK----D 899 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~E~~~l~~l~--------h~niv~l~~~~~~----~ 899 (1119)
||...++||-|.|++||+|.+....+.||+|+.+... +....||++++.++ ..+||++++.|.. +
T Consensus 79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG 158 (590)
T KOG1290|consen 79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNG 158 (590)
T ss_pred eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCC
Confidence 5777799999999999999999999999999997654 34566999999884 2479999999975 4
Q ss_pred CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC----------
Q 001226 900 EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE---------- 969 (1119)
Q Consensus 900 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---------- 969 (1119)
.++++|+|+. |.+|..++.....+ .++...+++|++||+.||.|||++| ||||.||||+|||+..+
T Consensus 159 ~HVCMVfEvL-GdnLLklI~~s~Yr-Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~~~ 234 (590)
T KOG1290|consen 159 QHVCMVFEVL-GDNLLKLIKYSNYR-GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDARE 234 (590)
T ss_pred cEEEEEehhh-hhHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhhhh
Confidence 5789999999 88999999887644 5899999999999999999999999 99999999999999411
Q ss_pred -C------------------------------------------------------------------------------
Q 001226 970 -L------------------------------------------------------------------------------ 970 (1119)
Q Consensus 970 -~------------------------------------------------------------------------------ 970 (1119)
+
T Consensus 235 a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~ 314 (590)
T KOG1290|consen 235 AGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNES 314 (590)
T ss_pred hccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcccc
Confidence 0
Q ss_pred -----------------------------------------------------------------------------ceE
Q 001226 971 -----------------------------------------------------------------------------EPK 973 (1119)
Q Consensus 971 -----------------------------------------------------------------------------~vk 973 (1119)
+||
T Consensus 315 ~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vK 394 (590)
T KOG1290|consen 315 TVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVK 394 (590)
T ss_pred chhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeEE
Confidence 022
Q ss_pred EEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC-----ceeeh
Q 001226 974 IGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT-----DIVTW 1048 (1119)
Q Consensus 974 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-----~~~~~ 1048 (1119)
|+|||-|+.... ..+.-..|..|+|||++.+..|++.+||||++|+.|||+||..-|++-.++.- +++..
T Consensus 395 IaDlGNACW~~k-----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i 469 (590)
T KOG1290|consen 395 IADLGNACWVHK-----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI 469 (590)
T ss_pred Eeeccchhhhhh-----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence 333333322211 00112457789999999999999999999999999999999999987654321 11111
Q ss_pred h-------hhhhccccccccccc--------ccccCCC---------chHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 001226 1049 T-------RWKLQENHECICFLD--------REISFWD---------SDDQLKALRLLELALECTRQVADMRPSMREVVG 1104 (1119)
Q Consensus 1049 ~-------~~~~~~~~~~~~~~~--------~~~~~~~---------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~ 1104 (1119)
. +.......-..++++ +++++|. .-+.+.+.++.+++.-||+.+|++||||.+.++
T Consensus 470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence 1 111111111112222 1223332 224566788999999999999999999999997
Q ss_pred H
Q 001226 1105 F 1105 (1119)
Q Consensus 1105 ~ 1105 (1119)
|
T Consensus 550 h 550 (590)
T KOG1290|consen 550 H 550 (590)
T ss_pred C
Confidence 6
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-29 Score=256.06 Aligned_cols=244 Identities=23% Similarity=0.313 Sum_probs=195.7
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
++...++||+|.|+.|.+++++.+.+.||+|++++. .+.++.|-.+..+. .||.+|.+..+|..+...++|.
T Consensus 251 df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvi 330 (593)
T KOG0695|consen 251 DFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVI 330 (593)
T ss_pred cceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEE
Confidence 445568999999999999999999999999998642 24467788887766 6999999999999999999999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS 986 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~ 986 (1119)
||++||+|--.+.+.+ .++++.++.+...|+-|+.|||+. ||+.||+|..||++|.+|++|+.|+|+.+.--
T Consensus 331 eyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l-- 402 (593)
T KOG0695|consen 331 EYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL-- 402 (593)
T ss_pred EEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC--
Confidence 9999999976665543 499999999999999999999999 99999999999999999999999999986432
Q ss_pred CCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccc
Q 001226 987 HSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDRE 1066 (1119)
Q Consensus 987 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1119)
.+....+..+|||.|.|||.+.+.+|...+|.|++||+++||+.|+.||+....+..+.-. +.+.+.-++.+.
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nt-------edylfqvilekq 475 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNT-------EDYLFQVILEKQ 475 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccch-------hHHHHHHHhhhc
Confidence 3445667789999999999999999999999999999999999999999864322221110 111122233333
Q ss_pred ccCCCchHHHHHHHHHHHHHHccccCCCCCC
Q 001226 1067 ISFWDSDDQLKALRLLELALECTRQVADMRP 1097 (1119)
Q Consensus 1067 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 1097 (1119)
++.. ...+-+...+++.-+++||.+|.
T Consensus 476 irip----rslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 476 IRIP----RSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred cccc----ceeehhhHHHHHHhhcCCcHHhc
Confidence 3322 22233456788889999999986
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=2e-29 Score=245.70 Aligned_cols=264 Identities=19% Similarity=0.311 Sum_probs=201.4
Q ss_pred HHHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-ccccHHHHHHHHhhcC-CCCEEEEeeeeecC--CceEEE
Q 001226 830 YEDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-SETNFDVEIRTLSLVR-HRNILRIVGSCTKD--EHGFIV 905 (1119)
Q Consensus 830 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lV 905 (1119)
+....+|+..+++|+|.|+.||.|....+.++++||+++. .+..+.+|+++++.++ ||||++++++..+. ....+|
T Consensus 34 wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 34 WGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred ccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 3445567777999999999999999888899999999974 4567899999999998 99999999998775 456899
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC-CceEEEecccccccc
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE-LEPKIGDFGMSKLIS 984 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~vkl~DfGla~~~~ 984 (1119)
+||+.+.+...... .++...+...+.++..|+.|+|++ ||+|||+||.|+|+|.. ...+++|+|+|.++.
T Consensus 114 FE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 99999887765543 366678899999999999999999 99999999999999976 468999999999886
Q ss_pred CCCCCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhh-------------
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTR------------- 1050 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~------------- 1050 (1119)
... ....++.+..|--||.+... .|+..-|+|||||++..|+..+.||.......++++...+
T Consensus 185 p~~---eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 185 PGK---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred CCc---eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 643 33445677888999988764 5788999999999999999999999765444333332211
Q ss_pred hhhcccccccccccccccC-C----CchH-HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1051 WKLQENHECICFLDREISF-W----DSDD-QLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~-~----~~~~-~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....-......++.+..+. | .... .....++.+++.+.+..|-.+|||++|.++|
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 1111111122222211110 1 0111 1123578899999999999999999999875
No 398
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-30 Score=276.40 Aligned_cols=241 Identities=22% Similarity=0.302 Sum_probs=198.5
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
..||-|+||.|-++........+|+|.+++. .+.+..|-++|...+.|.||+++-.|.++...|++||-|-||
T Consensus 426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGG 505 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGG 505 (732)
T ss_pred hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCc
Confidence 5699999999999988775556888887532 345677999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcc
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTR 992 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 992 (1119)
.+...+++++ .++..+++.++..+.+|++|||++ +||.||+||+|.+++.+|-+|+.|||+|+.+.. ....
T Consensus 506 ElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~---g~KT 576 (732)
T KOG0614|consen 506 ELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS---GRKT 576 (732)
T ss_pred hhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc---CCce
Confidence 9999999876 388888999999999999999999 999999999999999999999999999998865 3466
Q ss_pred cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCc
Q 001226 993 SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDS 1072 (1119)
Q Consensus 993 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1119)
+.++||+.|.|||.+..+.++.++|.||+|+++||+++|..||....+-.. +.. .+ .-+| .+ .
T Consensus 577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt----Yn~-IL-------kGid----~i-~ 639 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT----YNL-IL-------KGID----KI-E 639 (732)
T ss_pred eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH----HHH-HH-------hhhh----hh-h
Confidence 778999999999999999999999999999999999999999976422111 100 00 0000 00 1
Q ss_pred hHHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHHH
Q 001226 1073 DDQLKALRLLELALECTRQVADMRPS-----MREVVGFL 1106 (1119)
Q Consensus 1073 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ell~~L 1106 (1119)
.+...+....+++++.+..+|.+|.- +.||.+|-
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence 12334456678999999999999985 66766653
No 399
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-29 Score=289.02 Aligned_cols=242 Identities=29% Similarity=0.391 Sum_probs=189.1
Q ss_pred ceeeecCCcc-EEEEEeCCCceEEEEEecccc-cccHHHHHHHHhhc-CCCCEEEEeeeeecCCceEEEEeccCCCCHHH
Q 001226 840 RIIGKGKHGT-VYRTLSNNSRKHWAVKKLNRS-ETNFDVEIRTLSLV-RHRNILRIVGSCTKDEHGFIVTEYMPGGTLFN 916 (1119)
Q Consensus 840 ~~lG~G~fg~-Vy~~~~~~~~~~vavK~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 916 (1119)
+++|.|+.|+ ||+|... ++.||||++-.. .+-..+|+..++.- +|||||++++.-.+++..|+..|.| ..+|.+
T Consensus 515 eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~sL~d 591 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE--GREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACSLQD 591 (903)
T ss_pred HHcccCCCCcEEEEEeeC--CceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhhHHH
Confidence 5689999986 6999887 589999988543 44568899999988 5999999999999999999999999 569999
Q ss_pred hhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC---C--CceEEEeccccccccCCCCC-
Q 001226 917 VLHQNE-PRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS---E--LEPKIGDFGMSKLISDSHSS- 989 (1119)
Q Consensus 917 ~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~--~~vkl~DfGla~~~~~~~~~- 989 (1119)
++.... ..........+.+..|+++|++|||+. +|||||+||+||||+. + .+++|+|||+++....+...
T Consensus 592 lie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~ 668 (903)
T KOG1027|consen 592 LIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSF 668 (903)
T ss_pred HHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchh
Confidence 998741 111111134578899999999999998 9999999999999976 3 46899999999988755332
Q ss_pred CcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 990 STRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFR-KMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 990 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.......||.+|+|||.+....-+.++||||+|||+|+.++| .+||......+..+..- .......-.
T Consensus 669 ~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~-------~~~L~~L~~---- 737 (903)
T KOG1027|consen 669 SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTG-------NYTLVHLEP---- 737 (903)
T ss_pred hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcC-------ccceeeecc----
Confidence 234667899999999999988888999999999999999985 99998654443333221 111111100
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..+. ...++|.+|++++|..||++.+|+.|
T Consensus 738 ---~~d~----eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 738 ---LPDC----EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ---CchH----HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 0011 56799999999999999999999754
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=4.8e-28 Score=262.96 Aligned_cols=235 Identities=27% Similarity=0.403 Sum_probs=191.0
Q ss_pred CCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHHHhhcc
Q 001226 846 KHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQ 920 (1119)
Q Consensus 846 ~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 920 (1119)
+||.||+|....+++.||+|++... ...+.+|++.+++++|+|++++++++..+...++|+||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 5899999999988999999998543 35788999999999999999999999998999999999999999999876
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCC
Q 001226 921 NEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLG 1000 (1119)
Q Consensus 921 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~ 1000 (1119)
... +++..+..++.++++++.|||.. +++|+||+|+||+++.++.++++|||.+....... ......++..
T Consensus 81 ~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~ 151 (244)
T smart00220 81 RGR---LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPE 151 (244)
T ss_pred ccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcC
Confidence 543 78899999999999999999999 99999999999999999999999999998765432 2334567889
Q ss_pred cccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHH
Q 001226 1001 YIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALR 1080 (1119)
Q Consensus 1001 y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1080 (1119)
|+|||......++.++||||+|+++|++++|..||...... ....... ..............+.+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~~-----------~~~~~~~~~~~~~~~~~ 216 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKKI-----------GKPKPPFPPPEWKISPE 216 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHH-----------hccCCCCccccccCCHH
Confidence 99999988888899999999999999999999998642111 0000000 00000000000003457
Q ss_pred HHHHHHHccccCCCCCCCHHHHHH
Q 001226 1081 LLELALECTRQVADMRPSMREVVG 1104 (1119)
Q Consensus 1081 l~~l~~~cl~~dP~~RPs~~ell~ 1104 (1119)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 889999999999999999999987
No 401
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=5.8e-28 Score=265.89 Aligned_cols=198 Identities=28% Similarity=0.442 Sum_probs=171.6
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
+.||-|+||.|.+++..++...||+|.+++. ...++.|-.++.....+-||+++..|.+.+.+|+||||++||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG 714 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG 714 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence 7899999999999999999889999988542 345788999999999999999999999999999999999999
Q ss_pred CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc---cCCCCC
Q 001226 913 TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI---SDSHSS 989 (1119)
Q Consensus 913 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~---~~~~~~ 989 (1119)
++-.+|.+.+ .+++.-++.++..+..|+++.|.. |+|||||||+|||||.+|++|+.|||++.-+ .+..++
T Consensus 715 DmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY 788 (1034)
T KOG0608|consen 715 DMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 788 (1034)
T ss_pred cHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence 9999998876 588889999999999999999999 9999999999999999999999999997532 111110
Q ss_pred C-------------------------------------cccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCC
Q 001226 990 S-------------------------------------TRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRK 1032 (1119)
Q Consensus 990 ~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~ 1032 (1119)
. ..-..+||+.|+|||++....|+..+|.||.|||+|||+.|+
T Consensus 789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~ 868 (1034)
T KOG0608|consen 789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQ 868 (1034)
T ss_pred cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCC
Confidence 0 001247999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCC
Q 001226 1033 MPVDPSFGEDT 1043 (1119)
Q Consensus 1033 ~p~~~~~~~~~ 1043 (1119)
.||-.....+.
T Consensus 869 ~pf~~~tp~~t 879 (1034)
T KOG0608|consen 869 PPFLADTPGET 879 (1034)
T ss_pred CCccCCCCCcc
Confidence 99976554444
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.4e-30 Score=254.88 Aligned_cols=260 Identities=27% Similarity=0.320 Sum_probs=191.2
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccc------ccccHHHHHHHHhhcCCCCEEEEeeeeecC-----CceEEEEe
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR------SETNFDVEIRTLSLVRHRNILRIVGSCTKD-----EHGFIVTE 907 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lV~e 907 (1119)
.+.||-|+||+||.+.+..+|+.||+|++.. ....+-+|++++.-++|.||...++...-. ...|+|+|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 4789999999999999999999999998842 234577899999999999999998876543 34588899
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
.| ..+|..++-... .++.+.++-+.+||.+|++|||+. +|.||||||.|.+++++...||+|||+++.... +
T Consensus 138 Lm-QSDLHKIIVSPQ---~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~-d 209 (449)
T KOG0664|consen 138 LM-QSDLHKIIVSPQ---ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ-R 209 (449)
T ss_pred HH-HhhhhheeccCC---CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch-h
Confidence 88 457777766544 488889999999999999999999 999999999999999999999999999987654 3
Q ss_pred CCCcccccccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC-ce-e------ehhhhhhccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDT-DI-V------TWTRWKLQENHE 1058 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-~~-~------~~~~~~~~~~~~ 1058 (1119)
.....+..+.|..|+|||.+++. .|+.++||||.||++.|++.++.-|....+-.. +. . .....+..-...
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 34455667889999999998874 689999999999999999999988864321111 00 0 000000000000
Q ss_pred cccccccccc-----CCC--chHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1059 CICFLDREIS-----FWD--SDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1059 ~~~~~~~~~~-----~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
...++.+..+ ... ..+.....+...+...++..||++|.+.++.+++.
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0011111110 000 11112223456778899999999999999988765
No 403
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=3.1e-28 Score=234.22 Aligned_cols=195 Identities=25% Similarity=0.373 Sum_probs=160.1
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhh-cCCCCEEEEeeeeecCCceEEEEeccCCC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSL-VRHRNILRIVGSCTKDEHGFIVTEYMPGG 912 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~g 912 (1119)
...||+|+||.|-+.++..+|...|+|.++.. ..+..+|+.+..+ ...|.+|+++|...+++..++.||.| ..
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~t 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-DT 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-hh
Confidence 35699999999999999999999999988532 2334556665544 36999999999999999999999999 45
Q ss_pred CHHHhhccC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 913 TLFNVLHQN-EPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 913 sL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
+|..+-++. .....+++.-.-+|+..+++|+.|||++. .++|||+||+|||++.+|+||++|||.+..+.++ ..
T Consensus 130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS---iA 204 (282)
T KOG0984|consen 130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS---IA 204 (282)
T ss_pred hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh---hH
Confidence 666554431 22346889999999999999999999986 8999999999999999999999999999877553 22
Q ss_pred ccccccCCCcccccccC----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 001226 992 RSAIVGSLGYIAPENAY----STRLTEKSDVYSYGVILFELLFRKMPVDPSF 1039 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~----~~~~~~~sDvwslG~vl~elltg~~p~~~~~ 1039 (1119)
.+...|...|||||.+. +..|+.++||||+|+.+.||.+++.||+...
T Consensus 205 kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 205 KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 33346788999999664 3478999999999999999999999997653
No 404
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=3.7e-27 Score=274.84 Aligned_cols=258 Identities=20% Similarity=0.237 Sum_probs=177.3
Q ss_pred HHhhCCceeeecCCccEEEEEeC----------------CCceEEEEEeccccc------------------ccHHHHHH
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSN----------------NSRKHWAVKKLNRSE------------------TNFDVEIR 879 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~----------------~~~~~vavK~~~~~~------------------~~~~~E~~ 879 (1119)
.+|...++||+|+||+||+|... ..++.||||+++... +....|+.
T Consensus 145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence 35677799999999999999752 235679999975321 22334777
Q ss_pred HHhhcCCCCE-----EEEeeeeec--------CCceEEEEeccCCCCHHHhhccCCC---------------------CC
Q 001226 880 TLSLVRHRNI-----LRIVGSCTK--------DEHGFIVTEYMPGGTLFNVLHQNEP---------------------RL 925 (1119)
Q Consensus 880 ~l~~l~h~ni-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~ 925 (1119)
++.+++|.++ ++++++|.. .+..++||||+++++|.++++.... ..
T Consensus 225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~ 304 (507)
T PLN03224 225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD 304 (507)
T ss_pred HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence 7777776654 677777653 3567999999999999999875321 11
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCCccccc
Q 001226 926 VLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPE 1005 (1119)
Q Consensus 926 ~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE 1005 (1119)
..++..+..++.|+++|+.|+|+. +|+||||||+||+++.++.+|++|||++........ .......+++.|+|||
T Consensus 305 ~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 305 KRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPPE 380 (507)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeChh
Confidence 346778899999999999999999 999999999999999999999999999976543211 1112234578999999
Q ss_pred ccCCCC--------------------C--CCcchHHHHHHHHHHHHhCCC-CCCCCCCCCCce----eehhhhhhccccc
Q 001226 1006 NAYSTR--------------------L--TEKSDVYSYGVILFELLFRKM-PVDPSFGEDTDI----VTWTRWKLQENHE 1058 (1119)
Q Consensus 1006 ~~~~~~--------------------~--~~~sDvwslG~vl~elltg~~-p~~~~~~~~~~~----~~~~~~~~~~~~~ 1058 (1119)
.+.... + ..+.||||+||++|||++|.. ||.....-.... .....|.......
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 765322 1 134799999999999999875 664321100000 0001111100000
Q ss_pred ccccccccccCCCchHHHHHHHHHHHHHHccccCC---CCCCCHHHHHHH
Q 001226 1059 CICFLDREISFWDSDDQLKALRLLELALECTRQVA---DMRPSMREVVGF 1105 (1119)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPs~~ell~~ 1105 (1119)
..+. .........++++.+++..+| .+|+|++|+++|
T Consensus 461 ------~~~~----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 461 ------YDFS----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ------CCcc----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0011 111224567899999999766 689999999976
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=3.5e-28 Score=266.16 Aligned_cols=198 Identities=24% Similarity=0.416 Sum_probs=174.0
Q ss_pred CHHHHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc------------ccHHHHHHHHhhcC---CCCEEEEe
Q 001226 829 RYEDVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------------TNFDVEIRTLSLVR---HRNILRIV 893 (1119)
Q Consensus 829 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------------~~~~~E~~~l~~l~---h~niv~l~ 893 (1119)
.+.....|+..+.+|+|+||.|+.|.++.....|+||.+.+.+ -.+..|+.+|..++ |+||++++
T Consensus 556 ~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 556 EYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred eecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 3445556888899999999999999999998999999885432 12557999999997 99999999
Q ss_pred eeeecCCceEEEEecc-CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCce
Q 001226 894 GSCTKDEHGFIVTEYM-PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEP 972 (1119)
Q Consensus 894 ~~~~~~~~~~lV~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~v 972 (1119)
++|++++.+|++||-. ++.+|++++...+. +++.++..|.+|++.|+++||+. +|||||||-+||.++.+|-+
T Consensus 636 dfFEddd~yyl~te~hg~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~ 709 (772)
T KOG1152|consen 636 DFFEDDDYYYLETEVHGEGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFV 709 (772)
T ss_pred heeecCCeeEEEecCCCCCcchhhhhhccCc---cchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeE
Confidence 9999999999999986 45699999988763 89999999999999999999999 99999999999999999999
Q ss_pred EEEeccccccccCCCCCCcccccccCCCcccccccCCCCC-CCcchHHHHHHHHHHHHhCCCCCC
Q 001226 973 KIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRL-TEKSDVYSYGVILFELLFRKMPVD 1036 (1119)
Q Consensus 973 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~ 1036 (1119)
|++|||.|..... .....++||..|.|||++.+..| +.+-|||++|+++|-++..+-||+
T Consensus 710 klidfgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 710 KLIDFGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEeeccchhhhcC----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999876644 23456789999999999998877 567899999999999999999986
No 406
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-27 Score=244.65 Aligned_cols=255 Identities=25% Similarity=0.312 Sum_probs=195.2
Q ss_pred HHhhCCceeeecCCccEEEEEeCCCceEEEEEecccc------cccHHHHHHHHhhcCCCCEEEEeeeeecC------Cc
Q 001226 834 IRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVRHRNILRIVGSCTKD------EH 901 (1119)
Q Consensus 834 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 901 (1119)
.||...+.+|.|+- .|.-|.+.-.+++||+|++... .....+|..++..+.|+|+++++.+|.-. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 35555678898888 7778888888999999988432 23467899999999999999999999654 35
Q ss_pred eEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccc
Q 001226 902 GFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSK 981 (1119)
Q Consensus 902 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~ 981 (1119)
.|+|||+| ..+|...+.. .++-++...+..|++.|++|+|+. ||+|||+||+||++..+..+||.|||+|+
T Consensus 96 ~y~v~e~m-~~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhc
Confidence 69999999 5688887773 266778899999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 982 LISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 982 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
.... ....+..+.|..|+|||++.+-.+.+.+||||.||++.||++|+.-|.+. ..+..|.+....-+.....
T Consensus 167 ~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~----d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 167 TEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK----DHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred ccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc----hHHHHHHHHHHHhcCCCHH
Confidence 6543 24566778999999999999888999999999999999999999887632 2222232222111111111
Q ss_pred cc---------------------------cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1062 FL---------------------------DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1062 ~~---------------------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
++ |..+......+......+.+++.+|+..+|++|-+++++++|
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 11 111111111122334467899999999999999999999986
No 407
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.7e-25 Score=237.09 Aligned_cols=208 Identities=38% Similarity=0.626 Sum_probs=183.7
Q ss_pred eeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHHH
Q 001226 842 IGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLFN 916 (1119)
Q Consensus 842 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 916 (1119)
||+|.+|.||++....+++.+++|++.... ..+.+|+..++.++|++++++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999998889999999997654 458999999999999999999999999899999999999999999
Q ss_pred hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC-CCceEEEeccccccccCCCCCCccccc
Q 001226 917 VLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS-ELEPKIGDFGMSKLISDSHSSSTRSAI 995 (1119)
Q Consensus 917 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~vkl~DfGla~~~~~~~~~~~~~~~ 995 (1119)
++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++++|||.+........ .....
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~ 153 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTI 153 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcc
Confidence 998753 2488999999999999999999999 9999999999999999 89999999999986654321 12334
Q ss_pred ccCCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchH
Q 001226 996 VGSLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDD 1074 (1119)
Q Consensus 996 ~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1119)
.+...|++||..... .++.++|+|++|++++++
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 578899999988776 788999999999999999
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1075 QLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1075 ~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
..+.+++.+|++.+|++||+++++++++
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2567999999999999999999998753
No 408
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=2.2e-27 Score=256.51 Aligned_cols=263 Identities=21% Similarity=0.203 Sum_probs=201.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccccc---HHHHHHHHhhcC------CCCEEEEeeeeecCCceEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETN---FDVEIRTLSLVR------HRNILRIVGSCTKDEHGFIV 905 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~E~~~l~~l~------h~niv~l~~~~~~~~~~~lV 905 (1119)
+|.+.-..|+|-|++|.+|.+...|..||||++...+.. =..|+.+++++. --|+++++-.|....++|+|
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClV 512 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLV 512 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEE
Confidence 566667789999999999999999999999999765543 356999999985 34789999999999999999
Q ss_pred EeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-ceEEEecccccccc
Q 001226 906 TEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-EPKIGDFGMSKLIS 984 (1119)
Q Consensus 906 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~vkl~DfGla~~~~ 984 (1119)
+|-. ..+|.++++..+....+....+..++.|++-||..|-.. +|+|+||||.||||.+.- .+||||||.|....
T Consensus 513 FE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 513 FEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASFAS 588 (752)
T ss_pred ehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccccccc
Confidence 9988 679999999988777788899999999999999999988 999999999999999875 56999999998776
Q ss_pred CCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCc-ee-----ehhhhhhccccc
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTD-IV-----TWTRWKLQENHE 1058 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~-~~-----~~~~~~~~~~~~ 1058 (1119)
+.. .+....+..|.|||.+.+-.|+.+.|+||.||++||+.||+..|.+......- +. .+....+....-
T Consensus 589 ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF 664 (752)
T KOG0670|consen 589 ENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQF 664 (752)
T ss_pred ccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcch
Confidence 532 22344567899999999999999999999999999999999988654221110 00 000000000000
Q ss_pred cccccccccc--------------------------------C---CCchHHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 001226 1059 CICFLDREIS--------------------------------F---WDSDDQLKALRLLELALECTRQVADMRPSMREVV 1103 (1119)
Q Consensus 1059 ~~~~~~~~~~--------------------------------~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell 1103 (1119)
...-+|..+. . ...........+.+++.+|+..||++|.|..+.+
T Consensus 665 ~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL 744 (752)
T KOG0670|consen 665 KDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQAL 744 (752)
T ss_pred hhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHh
Confidence 0000111111 0 1122334456789999999999999999999988
Q ss_pred HH
Q 001226 1104 GF 1105 (1119)
Q Consensus 1104 ~~ 1105 (1119)
+|
T Consensus 745 ~H 746 (752)
T KOG0670|consen 745 KH 746 (752)
T ss_pred cC
Confidence 75
No 409
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=231.72 Aligned_cols=249 Identities=18% Similarity=0.305 Sum_probs=192.3
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc---ccHHHHHHHHhhc-CCCCEEEEeee-eecCCceEEEEecc
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---TNFDVEIRTLSLV-RHRNILRIVGS-CTKDEHGFIVTEYM 909 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lV~e~~ 909 (1119)
.|++.+.+|+|.||.+-+++++.+...+++|.+.+.. .+|.+|..---.+ .|.||+.-+++ |...+.+++++||+
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~a 104 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFA 104 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccC
Confidence 5777889999999999999999999999999986543 4677776554444 49999988874 56667888999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC-C-CCceEEEeccccccccCCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD-S-ELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~-~~~vkl~DfGla~~~~~~~ 987 (1119)
|.|+|.+.+...+ +-+...++++.|+++|+.|||++ .+||||||.+||||- . ..+||++|||..+..+..
T Consensus 105 P~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t- 176 (378)
T KOG1345|consen 105 PRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT- 176 (378)
T ss_pred ccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCce-
Confidence 9999998887654 77888899999999999999999 999999999999994 3 347999999998865432
Q ss_pred CCCcccccccCCCcccccccCC---C--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 988 SSSTRSAIVGSLGYIAPENAYS---T--RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 988 ~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
-.....+..|.|||.... + ...+.+|+|.||+++|..+||+.||....-.+.....|..|..+.......
T Consensus 177 ----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~- 251 (378)
T KOG1345|consen 177 ----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK- 251 (378)
T ss_pred ----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch-
Confidence 122334667999995432 2 346789999999999999999999986666666677777776554432222
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
.++ ..+..+.++.++-+.++|++|--..++.++-
T Consensus 252 ---~F~-------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 252 ---KFN-------PFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred ---hhc-------ccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 122 1234567788899999999996555555443
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=6.2e-27 Score=260.85 Aligned_cols=248 Identities=26% Similarity=0.347 Sum_probs=196.6
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
+|.....+|+|.||.||||+++.+++..|+|+++-.. ...+.|+-+++..+|||||.+++.+...+..+++||||.
T Consensus 16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycg 95 (829)
T KOG0576|consen 16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCG 95 (829)
T ss_pred chhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecC
Confidence 3444578999999999999999999999999986433 346779999999999999999999999999999999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCC
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSS 990 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 990 (1119)
+|+|.+.-+..+ .+++.++..+++...+|++|+|++ |=+|||||-.||++++.|.+|++|||.+..++. ...
T Consensus 96 ggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita--ti~ 167 (829)
T KOG0576|consen 96 GGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA--TIA 167 (829)
T ss_pred CCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh--hhh
Confidence 999999888766 488999999999999999999999 899999999999999999999999999877653 223
Q ss_pred cccccccCCCcccccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccc
Q 001226 991 TRSAIVGSLGYIAPENAY---STRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREI 1067 (1119)
Q Consensus 991 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1119)
.+....||+.|||||+.. .+.|...+|||+.|+...|+-.-+.|.. +........++....+ -.+.+
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf-------dlhpmr~l~LmTkS~~---qpp~l 237 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF-------DLHPMRALFLMTKSGF---QPPTL 237 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc-------ccchHHHHHHhhccCC---CCCcc
Confidence 445678999999999653 5668899999999999999876665532 2222222222111110 01111
Q ss_pred cCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 001226 1068 SFWDSDDQLKALRLLELALECTRQVADMRPSMREVVG 1104 (1119)
Q Consensus 1068 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~ 1104 (1119)
+ ....-...+.++++.|+..+|.+||+++.+++
T Consensus 238 k----Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 238 K----DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred c----CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1 01112446789999999999999999988765
No 411
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=7.2e-26 Score=242.14 Aligned_cols=262 Identities=23% Similarity=0.318 Sum_probs=194.1
Q ss_pred HhhCCceeeecCCccEEEEEeCC---CceEEEEEeccc--ccccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEec
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNN---SRKHWAVKKLNR--SETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
.|...++||+|.|++||++.+.. ..++||+|.+.. ....+.+|++++.++. +.||+++.+++...+...+|+||
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~ 116 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPY 116 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecc
Confidence 35556899999999999999877 788999998853 4567899999999985 99999999999999999999999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC-CceEEEeccccccccCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE-LEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~vkl~DfGla~~~~~~~ 987 (1119)
++.....++... ++...+..+++.+..||+++|.. |||||||||+|++.+.. +.-.|.|||+|.......
T Consensus 117 ~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~ 187 (418)
T KOG1167|consen 117 FEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ 187 (418)
T ss_pred cCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence 999998888764 55778899999999999999999 99999999999999864 667999999997221000
Q ss_pred ------------------------------------------CCCcccccccCCCcccccccCC-CCCCCcchHHHHHHH
Q 001226 988 ------------------------------------------SSSTRSAIVGSLGYIAPENAYS-TRLTEKSDVYSYGVI 1024 (1119)
Q Consensus 988 ------------------------------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~v 1024 (1119)
.......+.||++|+|||++.. ...+.++||||.||+
T Consensus 188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI 267 (418)
T KOG1167|consen 188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI 267 (418)
T ss_pred hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence 0001123579999999998765 567899999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCceeehhh---hh-------hccc------cc---cccc------cc-ccccCCCc------
Q 001226 1025 LFELLFRKMPVDPSFGEDTDIVTWTR---WK-------LQEN------HE---CICF------LD-REISFWDS------ 1072 (1119)
Q Consensus 1025 l~elltg~~p~~~~~~~~~~~~~~~~---~~-------~~~~------~~---~~~~------~~-~~~~~~~~------ 1072 (1119)
+.-+++++.||.....+...+..... +. .... .. ..+. ++ +.+.....
T Consensus 268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~ 347 (418)
T KOG1167|consen 268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE 347 (418)
T ss_pred eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence 99999999999765444332211100 00 0000 00 0000 00 00000000
Q ss_pred h-HHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1073 D-DQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1073 ~-~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
. ....+..+.+++.+|+..||.+|.|+++.++|
T Consensus 348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0 00112357899999999999999999999875
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=4.2e-27 Score=247.46 Aligned_cols=305 Identities=20% Similarity=0.184 Sum_probs=186.9
Q ss_pred EEecCCCcccccCccchhhhccCCcccEEEcCCCcccCCCCcccccCCCccEEEcccccccccCCccccccCccCEEEcc
Q 001226 73 ALNLSGFGLSGVLNNSISYICKNQHLLSLDLSGNEFTGSIPKQLGNCGQLKTLLLNDNRFQGSIPPEIFKLKRLSWLDLG 152 (1119)
Q Consensus 73 ~l~l~~~~l~~~~~~~~~~~~~l~~l~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~Ls 152 (1119)
.++.++.||+.++-+. -+..+.|+|..|+|+...|.+|+.+++|+.||||+|+|+.+-|.+|..+++|..|-+.
T Consensus 50 ~VdCr~~GL~eVP~~L------P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvly 123 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANL------PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLY 123 (498)
T ss_pred eEEccCCCcccCcccC------CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhh
Confidence 3566777888775532 2467888888888886666678888888888888888888888888888887666554
Q ss_pred C-ccccCCCCcccccccccceeeecccccccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCc
Q 001226 153 Y-NSLSGKIPPQVSLCYSLESIGFHNNFLNGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSL 231 (1119)
Q Consensus 153 ~-n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~l 231 (1119)
+ |+|+..--..|+++..|+.|.+.-|++..+..+.|..|++|..|.+..|.+.. +
T Consensus 124 g~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~------------------------i 179 (498)
T KOG4237|consen 124 GNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQS------------------------I 179 (498)
T ss_pred cCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhh------------------------h
Confidence 4 88885555677888888888888888887777788888888888887777652 2
Q ss_pred cc-cccCCCCCcEEEccCCccCCccChhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccC
Q 001226 232 PT-SLSNCRNLVEFSASSNNFGGAISPWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISH 310 (1119)
Q Consensus 232 p~-~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 310 (1119)
+. .+..+.+++.+.+..|.+.. ..+|+++- .+....|..+++..-.....+.++++..+.+..|..
T Consensus 180 ~~~tf~~l~~i~tlhlA~np~ic---------dCnL~wla----~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c 246 (498)
T KOG4237|consen 180 CKGTFQGLAAIKTLHLAQNPFIC---------DCNLPWLA----DDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLC 246 (498)
T ss_pred ccccccchhccchHhhhcCcccc---------ccccchhh----hHHhhchhhcccceecchHHHHHHHhcccchhhhhh
Confidence 22 45555666666666555321 11122110 011123344555555556666677776665555543
Q ss_pred C-CCCcEEEccccccccccC-cccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccce
Q 001226 311 C-NQLQVIALSRNNLVGQIP-RSVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEV 388 (1119)
Q Consensus 311 l-~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~ 388 (1119)
. ..+..=-.+.+...+..| ..|..+++|+.|+|++|+|+++-+.+|.++.++++|.|..|+|.......|.++..|+.
T Consensus 247 ~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~t 326 (498)
T KOG4237|consen 247 SLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKT 326 (498)
T ss_pred hHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhcccccee
Confidence 3 111111111222222222 34566666666666666666666666666666666666666665444445556666666
Q ss_pred eeccCccccCCCCccccccCcceEEEeecccc
Q 001226 389 LYLFNNRIEGAIPHQIGRMSKLVELALYNNRL 420 (1119)
Q Consensus 389 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 420 (1119)
|+|.+|+|+...|.+|..+..|.+|+|-.|.+
T Consensus 327 L~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 327 LSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred eeecCCeeEEEecccccccceeeeeehccCcc
Confidence 66666666655555555555555555555554
No 413
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=8.3e-24 Score=275.48 Aligned_cols=339 Identities=19% Similarity=0.241 Sum_probs=209.5
Q ss_pred cccccCCCCCcEEEccccc------cccccCcccCCCC-CCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCc
Q 001226 305 SGQISHCNQLQVIALSRNN------LVGQIPRSVGNLS-SLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIP 377 (1119)
Q Consensus 305 ~~~~~~l~~L~~L~Ls~N~------l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 377 (1119)
+.+|.++++|+.|.+..+. +...+|..+..++ +|+.|.+.++.++ .+|..| ...+|++|++++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 3455666666666664432 2223455555543 5777777777665 555555 3566777777777766 455
Q ss_pred hhhhcccccceeeccCccccCCCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCC
Q 001226 378 PEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFP 457 (1119)
Q Consensus 378 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~ 457 (1119)
..+..+++|+.|+|++|.....+|. +..+++|+.|+|++|.....+|..+..+++|+.|++++|.-.+.+|... .++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~ 704 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLK 704 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCC
Confidence 5666677777777776643334453 6666777777777765444667677777777777777654333444433 456
Q ss_pred ccceeccccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccc-------cCCCccccCCCC
Q 001226 458 YLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQ-------GSLPATLERNPG 530 (1119)
Q Consensus 458 ~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-------~~~p~~~~~l~~ 530 (1119)
+|+.|++++|...+.+|.. .++|+.|++++|.+. .+|..+ .+++|+.|++.++... ...+..+...++
T Consensus 705 sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~s 779 (1153)
T PLN03210 705 SLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPS 779 (1153)
T ss_pred CCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhcccc
Confidence 6777777776554445532 356777777777765 555544 4667777777664321 111222233456
Q ss_pred cceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccC
Q 001226 531 VSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSD 610 (1119)
Q Consensus 531 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 610 (1119)
|+.|++++|...+.+|..++.+++|+.|+|++|...+.+|..+ ++++|+.|+|++|.....+|.. .++|+.|+|++
T Consensus 780 L~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~ 855 (1153)
T PLN03210 780 LTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSR 855 (1153)
T ss_pred chheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCC
Confidence 7777777776666677777777777777777765444666655 5677777777776554455543 35677777777
Q ss_pred ccccccCChhhhhcccCCeeEccC-ccCccCCCccccccccccEeecCCcc
Q 001226 611 NYLAGSIPSEVISLEKMQSLSLQE-NNLSGAIPDAFSSVQSLFELQLGSNI 660 (1119)
Q Consensus 611 N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~ 660 (1119)
|.++ .+|.++..+++|+.|+|++ |+|. .+|..+..+++|+.+++++|.
T Consensus 856 n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 856 TGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 7776 5677777777777777776 4444 466666777777777776664
No 414
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.91 E-value=6.1e-24 Score=227.93 Aligned_cols=195 Identities=33% Similarity=0.519 Sum_probs=170.2
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCC
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
...+.||+|++|.||++....+++.+|+|.+... ...+.+|+..+++++|+|++++++++..+...++++|++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 81 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG 81 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence 3457899999999999999988899999998643 45678899999999999999999999998999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
++|.+++..... .+++.....++.+++.++.++|.. +++|+|++|.||+++.++.++++|||.+........ ..
T Consensus 82 ~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~ 155 (225)
T smart00221 82 GDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-AL 155 (225)
T ss_pred CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-cc
Confidence 999999987542 178889999999999999999999 999999999999999999999999999987754321 12
Q ss_pred ccccccCCCccccccc-CCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001226 992 RSAIVGSLGYIAPENA-YSTRLTEKSDVYSYGVILFELLFRKMPVDP 1037 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~vl~elltg~~p~~~ 1037 (1119)
.....++..|++||.. ....++.++|+|++|+++|||++|+.||+.
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 2345678899999988 667788899999999999999999999953
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=1.8e-26 Score=242.76 Aligned_cols=413 Identities=22% Similarity=0.237 Sum_probs=239.5
Q ss_pred EcCCCccCCCcchhhcCCCCCceeeeccccccccCcccccCCCCCcEEEccccccccccCcccCCCCCCCeEEccC-Ccc
Q 001226 270 YLDDNNLEGQIPETLWGLENLQKLVLSANKLNGTISGQISHCNQLQVIALSRNNLVGQIPRSVGNLSSLNSLLLFN-NRL 348 (1119)
Q Consensus 270 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l 348 (1119)
+-++-+++ .+|..+. +.-+.|+|..|+|+.+++++|+.+++|+.||||+|+|+.+.|.+|.++.+|..|-+.+ |+|
T Consensus 52 dCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 33444444 4454443 3556777777777777777777777777777777777777777777777776666555 777
Q ss_pred cCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEEeecccccc------
Q 001226 349 QGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALYNNRLTG------ 422 (1119)
Q Consensus 349 ~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------ 422 (1119)
+......|++|..|+.|.+.-|++.-+..+.|..+++|..|.+.+|.+..+.-..|..+..++.+.+..|.+..
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccch
Confidence 76555667777777777777777765556667777777777777777764444467777777777777776321
Q ss_pred ------cCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceeeCccCCccccccccceeeccCccccCC
Q 001226 423 ------RIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGS 496 (1119)
Q Consensus 423 ------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~ 496 (1119)
..|-.++...-..-..+.++++..+-+..+... ...+..=-.+.+...+.
T Consensus 209 la~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~------------------------~esl~s~~~~~d~~d~~ 264 (498)
T KOG4237|consen 209 LADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCS------------------------LESLPSRLSSEDFPDSI 264 (498)
T ss_pred hhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhh------------------------HHhHHHhhccccCcCCc
Confidence 112222222323333333333332111111111 11111111112222222
Q ss_pred CC-ccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCC
Q 001226 497 FP-IEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGN 575 (1119)
Q Consensus 497 ~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 575 (1119)
-| ..|..+++|+.|+|++|+++++.+.+|.+...++.|.|..|++...-...|..++.|++|+|.+|+|+..-|.+|..
T Consensus 265 cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~ 344 (498)
T KOG4237|consen 265 CPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQT 344 (498)
T ss_pred ChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccc
Confidence 22 35777888888888888888888888888888888888888887666677888888888888888888888888888
Q ss_pred cccccEEEcccCcccC-----------------cCCcccccCCCCcEEeccCccccc---cCChhhhhcccCCeeEccCc
Q 001226 576 LENLQILRLSANKLDG-----------------RIPYELGKCTKMIKLDLSDNYLAG---SIPSEVISLEKMQSLSLQEN 635 (1119)
Q Consensus 576 l~~L~~L~Ls~N~l~~-----------------~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~L~~N 635 (1119)
+..|.+|+|-.|.+.= ..|.. .+-..++.++++++.+.. ..|++.+-++
T Consensus 345 ~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~C-q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~---------- 413 (498)
T KOG4237|consen 345 LFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRC-QSPGFVRQIPISDVAFGDFRCGGPEELGCLT---------- 413 (498)
T ss_pred cceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCC-CCCchhccccchhccccccccCCccccCCCC----------
Confidence 8888888888877631 01111 112345666666665531 1222221110
Q ss_pred cCccCCCccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCcccccccccccceeeccCceecccCC
Q 001226 636 NLSGAIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQILDLSSNSFSGEIP 715 (1119)
Q Consensus 636 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip 715 (1119)
.+..-..++-+.+.-=-.|+....+|..+..-. ..|.+.+|.++ .+|.. .++.| .+|||+|+++-.--
T Consensus 414 -----s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP~d~---telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn 481 (498)
T KOG4237|consen 414 -----SSPCPPPCTCLDTVVRCSNKLLKLLPRGIPVDV---TELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSN 481 (498)
T ss_pred -----CCCCCCCcchhhhhHhhcccchhhcCCCCCchh---HHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhc
Confidence 011111122222211112222223443332221 12556666666 55655 55666 66777777764444
Q ss_pred ccccccccceEEecccc
Q 001226 716 TEVNNMVSLYFVNISFN 732 (1119)
Q Consensus 716 ~~~~~~~~l~~l~ls~N 732 (1119)
-.+.+++.|..|-||+|
T Consensus 482 ~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 482 YTFSNMTQLSTLILSYN 498 (498)
T ss_pred ccccchhhhheeEEecC
Confidence 45666666777766665
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.2e-23 Score=273.93 Aligned_cols=339 Identities=22% Similarity=0.284 Sum_probs=254.8
Q ss_pred chhhhcccccceeeccCcc------ccCCCCccccccC-cceEEEeecccccccCCccccCCCCcCEEEccCccCcccch
Q 001226 377 PPEICNLAKLEVLYLFNNR------IEGAIPHQIGRMS-KLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVA 449 (1119)
Q Consensus 377 ~~~l~~l~~L~~L~L~~N~------l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 449 (1119)
+.+|.++++|+.|.+..+. +...+|..|..++ +|+.|++.+|.++ .+|..| ...+|+.|+|++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 3456677777777775543 2234555555553 5777888777776 566665 4677888888887776 344
Q ss_pred hhhhccCCccceeccccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCC
Q 001226 450 LELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNP 529 (1119)
Q Consensus 450 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 529 (1119)
... ..++.|+.|+|++|.....+|. ++.+++|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ .++
T Consensus 628 ~~~-~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~ 704 (1153)
T PLN03210 628 DGV-HSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLK 704 (1153)
T ss_pred ccc-ccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCC
Confidence 333 3577788888877665556663 6777888888888887666888888888888888888876555677655 688
Q ss_pred CcceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCccc-------CcCCcccccCCC
Q 001226 530 GVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLD-------GRIPYELGKCTK 602 (1119)
Q Consensus 530 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-------~~~p~~~~~l~~ 602 (1119)
+|+.|++++|...+.+|.. .++|++|+|++|.+. .+|..+ .+++|+.|+++++... ...|..+...++
T Consensus 705 sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~s 779 (1153)
T PLN03210 705 SLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPS 779 (1153)
T ss_pred CCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhcccc
Confidence 8888888888766666643 467889999999987 677765 5788888888774432 122223344578
Q ss_pred CcEEeccCccccccCChhhhhcccCCeeEccCccCccCCCccccccccccEeecCCcccCCCccccchhhccccceeeec
Q 001226 603 MIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSGAIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVS 682 (1119)
Q Consensus 603 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls 682 (1119)
|+.|+|++|...+.+|.+++++++|+.|+|++|..-+.+|..+ ++++|+.|++++|.....+|..... ++.|+|+
T Consensus 780 L~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~n----L~~L~Ls 854 (1153)
T PLN03210 780 LTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDISTN----ISDLNLS 854 (1153)
T ss_pred chheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccccc----cCEeECC
Confidence 9999999998777899999999999999999986556788877 7899999999998777777765433 3458999
Q ss_pred cccccCCcccccccccccceeeccC-ceecccCCccccccccceEEeccccc
Q 001226 683 NNKLSGKIPECLGNLDKLQILDLSS-NSFSGEIPTEVNNMVSLYFVNISFNH 733 (1119)
Q Consensus 683 ~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~~~~l~~l~ls~N~ 733 (1119)
+|.++ .+|.+++.+++|+.|+|++ |+++ .+|..+..+++|+.++++++.
T Consensus 855 ~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 855 RTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 99998 7899999999999999998 5666 688889999999999998874
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.4e-23 Score=252.62 Aligned_cols=265 Identities=27% Similarity=0.353 Sum_probs=129.4
Q ss_pred cccceeeccCccccCCCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceec
Q 001226 384 AKLEVLYLFNNRIEGAIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLD 463 (1119)
Q Consensus 384 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 463 (1119)
.+-..|++++|.++ .+|..+. ++|+.|++++|+++ .+|. ..++|++|+|++|+|+. +|. ..+.|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lts-LP~----lp~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV----LPPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCc-ccC----cccccceee
Confidence 34556777777777 4555444 36677777777776 3443 23566666666666652 221 123344444
Q ss_pred cccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCC
Q 001226 464 LTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQG 543 (1119)
Q Consensus 464 L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 543 (1119)
+++|.+ + .+|.. .++|+.|++++|+++. +|.. .++|+.|++++|++++
T Consensus 269 Ls~N~L------------------------~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~ 316 (788)
T PRK15387 269 IFSNPL------------------------T-HLPAL---PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS 316 (788)
T ss_pred ccCCch------------------------h-hhhhc---hhhcCEEECcCCcccc-cccc---ccccceeECCCCcccc
Confidence 444444 3 22221 1234444555554442 2221 2334444444444442
Q ss_pred CCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhh
Q 001226 544 SIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVIS 623 (1119)
Q Consensus 544 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 623 (1119)
+|.. ..+|+.|++++|+|+ .+|... .+|+.|+|++|+|+ .+|.. ..+|+.|++++|+|++ +|...
T Consensus 317 -Lp~l---p~~L~~L~Ls~N~L~-~LP~lp---~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l~-- 381 (788)
T PRK15387 317 -LPAL---PSELCKLWAYNNQLT-SLPTLP---SGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPALP-- 381 (788)
T ss_pred -CCCC---cccccccccccCccc-cccccc---cccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Ccccc--
Confidence 2221 123445555555554 233211 24555555555555 23332 1344445555555542 44321
Q ss_pred cccCCeeEccCccCccCCCccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCccccccccccccee
Q 001226 624 LEKMQSLSLQENNLSGAIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQIL 703 (1119)
Q Consensus 624 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~L 703 (1119)
.+|+.|+|++|+|++ +|... ++|+. |++++|+|+ .+|... .+|+.|
T Consensus 382 -~~L~~LdLs~N~Lt~-LP~l~---s~L~~-------------------------LdLS~N~Ls-sIP~l~---~~L~~L 427 (788)
T PRK15387 382 -SGLKELIVSGNRLTS-LPVLP---SELKE-------------------------LMVSGNRLT-SLPMLP---SGLLSL 427 (788)
T ss_pred -cccceEEecCCcccC-CCCcc---cCCCE-------------------------EEccCCcCC-CCCcch---hhhhhh
Confidence 344555555555542 33221 23333 455555555 244322 345566
Q ss_pred eccCceecccCCccccccccceEEecccccccccCCCcc
Q 001226 704 DLSSNSFSGEIPTEVNNMVSLYFVNISFNHFSGKLPASW 742 (1119)
Q Consensus 704 ~Ls~N~l~g~ip~~~~~~~~l~~l~ls~N~~~g~~p~~~ 742 (1119)
+|++|+|+ .+|..+.++.+|+.+++++|+|+|.+|..+
T Consensus 428 ~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 428 SVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred hhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 66666666 566666666666667777777776666543
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=7.4e-23 Score=246.34 Aligned_cols=127 Identities=28% Similarity=0.359 Sum_probs=76.9
Q ss_pred CcceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEecc
Q 001226 530 GVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLS 609 (1119)
Q Consensus 530 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 609 (1119)
+|+.|+|++|+|++ +|.. .++|+.|++++|+|+ .+|... .+|+.|+|++|+|. .+|.. .++|+.|+++
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l~---~~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS 410 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPALP---SGLKELIVSGNRLT-SLPVL---PSELKELMVS 410 (788)
T ss_pred ccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCcccc---cccceEEecCCccc-CCCCc---ccCCCEEEcc
Confidence 34444444444442 3322 234556666666666 345432 35667777777776 35543 2467777777
Q ss_pred CccccccCChhhhhcccCCeeEccCccCccCCCccccccccccEeecCCcccCCCccccchhhc
Q 001226 610 DNYLAGSIPSEVISLEKMQSLSLQENNLSGAIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLH 673 (1119)
Q Consensus 610 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 673 (1119)
+|+|++ +|... .+|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|+|.+|..+.++.
T Consensus 411 ~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l~ 469 (788)
T PRK15387 411 GNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 469 (788)
T ss_pred CCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHHh
Confidence 777763 55432 35667777777777 5777777777777777777777777776665443
No 419
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=1.4e-23 Score=265.66 Aligned_cols=197 Identities=19% Similarity=0.192 Sum_probs=138.4
Q ss_pred hcCC-CCEEEEeeee-------ecCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 001226 883 LVRH-RNILRIVGSC-------TKDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQI 954 (1119)
Q Consensus 883 ~l~h-~niv~l~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 954 (1119)
.++| +||.+++++| .+.+..+.++||+ +++|.+++.... ..+++.++..++.||++||+|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 4445 5788888877 2234567888987 669999997543 3589999999999999999999999 99
Q ss_pred EecCCCCCCeEeCCCC-------------------ceEEEeccccccccCCCC--------------CCcccccccCCCc
Q 001226 955 IHRDIKSDNILLDSEL-------------------EPKIGDFGMSKLISDSHS--------------SSTRSAIVGSLGY 1001 (1119)
Q Consensus 955 vH~Dlkp~Nill~~~~-------------------~vkl~DfGla~~~~~~~~--------------~~~~~~~~gt~~y 1001 (1119)
+||||||+|||++..+ .+|++|||+++....... ........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 9999999999996544 455556665543211000 0001124588999
Q ss_pred ccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHH
Q 001226 1002 IAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRL 1081 (1119)
Q Consensus 1002 ~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1081 (1119)
+|||++.+..++.++|||||||++|||++|..|+.... ........ ..+.+. ........
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~----------~~~~~~-------~~~~~~~~ 241 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRH----------RVLPPQ-------ILLNWPKE 241 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHH----------hhcChh-------hhhcCHHH
Confidence 99999999999999999999999999999887764210 00000000 000000 01112344
Q ss_pred HHHHHHccccCCCCCCCHHHHHHH
Q 001226 1082 LELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1082 ~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..++.+||+++|.+||+++|++++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhc
Confidence 678889999999999999999875
No 420
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.88 E-value=1.9e-22 Score=207.40 Aligned_cols=170 Identities=19% Similarity=0.189 Sum_probs=127.6
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|+|.++++..+. .+++.+++.++.|+++|++|||+. + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 689999986542 489999999999999999999998 5 999999999999999 99987654321
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
..||+.|+|||++.+..++.++||||+||++|||++|+.||................. .+......
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 129 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGM-----------PADDPRDR 129 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHh-----------ccCCcccc
Confidence 2578999999999999999999999999999999999999864321111111110000 00000000
Q ss_pred chHHHHH--HHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1072 SDDQLKA--LRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1072 ~~~~~~~--~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
....... ..+.+++.+||+.+|++||++.|+++++.....+
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 1111222 2689999999999999999999999999876543
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=4.1e-23 Score=206.38 Aligned_cols=241 Identities=25% Similarity=0.400 Sum_probs=184.6
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecc------cccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCC
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLN------RSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGT 913 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 913 (1119)
.+|.+...|..|+|++.. ..+++|+++ +...+|..|...++.+.||||.++++.|.......++..|||.|+
T Consensus 196 tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 568899999999999885 445666663 234678999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEE--eccccccccCCCCCCc
Q 001226 914 LFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIG--DFGMSKLISDSHSSST 991 (1119)
Q Consensus 914 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~--DfGla~~~~~~~~~~~ 991 (1119)
|+.++++... ..++..++++++.+|++|++|||+.. +-|.---+.+..|++|++.+++|. |--++. .
T Consensus 274 lynvlhe~t~-vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf---------q 342 (448)
T KOG0195|consen 274 LYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF---------Q 342 (448)
T ss_pred HHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee---------e
Confidence 9999998653 45778899999999999999999874 223344588999999999887664 333222 1
Q ss_pred ccccccCCCcccccccCCCCC---CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccccccccc
Q 001226 992 RSAIVGSLGYIAPENAYSTRL---TEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREIS 1068 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~---~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1119)
.....-.+.||+||.+...+- -+++|+|||++++||+.|++.||....+-+-.... . .+-+.
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki----a-------leglr---- 407 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI----A-------LEGLR---- 407 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh----h-------hcccc----
Confidence 122344678999998876543 36899999999999999999999754322111100 0 00011
Q ss_pred CCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 001226 1069 FWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLN 1110 (1119)
Q Consensus 1069 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~ 1110 (1119)
...++..+..+.+++.-|++.||.+||.++.|+-.|+++.
T Consensus 408 --v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 408 --VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred --ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 1123344567889999999999999999999999999975
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=5e-21 Score=197.55 Aligned_cols=261 Identities=18% Similarity=0.210 Sum_probs=199.4
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEec--ccccccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEeccCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKL--NRSETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
.|.++++||+|.||+.+.|..--++++||||.- +.+..+...|.+..+.+. .++|..++.+..++.+..+|+|.. |
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-G 107 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-G 107 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-C
Confidence 567889999999999999999888999999975 344567888999999885 789999998888898999999999 8
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-----ceEEEeccccccccCC
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-----EPKIGDFGMSKLISDS 986 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-----~vkl~DfGla~~~~~~ 986 (1119)
-+|+|++.-++. .++.++++.+|.|++.-++|+|++ .+|.|||||+|+||...+ .+.++|||+|+.+.+.
T Consensus 108 PSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 108 PSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred cCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 899999988875 489999999999999999999999 899999999999997543 4799999999988654
Q ss_pred CC-----CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccc
Q 001226 987 HS-----SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECIC 1061 (1119)
Q Consensus 987 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1119)
.. +.......||.+||+-....+++.+++.|+-|+|-|+.+++.|..||.+...+.. ...+.+.-......-.+
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn-K~kYeKIGe~Kr~T~i~ 261 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN-KEKYEKIGETKRSTPIE 261 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch-HHHHHHhccccccCCHH
Confidence 32 3344556799999999999999999999999999999999999999987633221 11111111111111011
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1062 FLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
.+. ...+.++..-+.-.-..+=++-|+.+-+...+..+.+.
T Consensus 262 ~Lc----------~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 262 VLC----------EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred HHH----------hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 111 11233444444444455666778888777666655544
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.1e-20 Score=213.29 Aligned_cols=261 Identities=21% Similarity=0.314 Sum_probs=196.1
Q ss_pred HhhCCceeeecCCccEEEEEeCCCc-eEEEEEecccc----cccHHHHHHHHhhcCC----CCEEEEeeee-ecCCceEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSR-KHWAVKKLNRS----ETNFDVEIRTLSLVRH----RNILRIVGSC-TKDEHGFI 904 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~-~~vavK~~~~~----~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 904 (1119)
+|...++||+|+||.||.+.+..++ ..+|+|.-... ...+..|+.++..+.. +++..+++.. ..+...|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 6788899999999999999987764 57888876432 2268889999998873 6899999988 47778899
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC-----CceEEEeccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE-----LEPKIGDFGM 979 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-----~~vkl~DfGl 979 (1119)
||+.+ |.+|.++..... ...++..++.+++.|++.+|+++|+. |++||||||.|+++... ..+.+.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 889999887666 44699999999999999999999999 99999999999999865 3589999999
Q ss_pred cc--cccCCCC-----CCc-ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhh
Q 001226 980 SK--LISDSHS-----SST-RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRW 1051 (1119)
Q Consensus 980 a~--~~~~~~~-----~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 1051 (1119)
++ ....... ... .....||.+|++++...+.+.+++.|+||++.++.|+..|..||........ .......
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~ 252 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKD 252 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHH
Confidence 98 4322211 111 2345699999999999999999999999999999999999999854321111 1111000
Q ss_pred hhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccccCC
Q 001226 1052 KLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
... ..... . ....+..+.++...+-..+...+|....+...++....+.+
T Consensus 253 ~~~------~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~ 302 (322)
T KOG1164|consen 253 PRK------LLTDR---F----GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEG 302 (322)
T ss_pred hhh------hcccc---c----cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcC
Confidence 000 00000 0 01112344556666666899999999999999887766653
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=2.8e-21 Score=216.16 Aligned_cols=160 Identities=19% Similarity=0.183 Sum_probs=124.8
Q ss_pred HhhCCceeeecCCccEEEEEeCC-CceEEEEEecccc---------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNN-SRKHWAVKKLNRS---------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~~vavK~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 904 (1119)
+|+..+.||+|+||+||+|.++. +++.||||+.... ...+.+|+++++.++|+|+++.+.. .+..|+
T Consensus 19 ~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~L 95 (365)
T PRK09188 19 RFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGL 95 (365)
T ss_pred CceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEE
Confidence 57778999999999999998876 6777899986422 2347899999999999999853332 245799
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC-CCCCeEeCCCCceEEEeccccccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDI-KSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
||||++|++|... ... . ...++.++++|+.|+|+. ||+|||| ||+||+++.++.+||+|||+|+..
T Consensus 96 VmE~~~G~~L~~~-~~~------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 96 VRGWTEGVPLHLA-RPH------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred EEEccCCCCHHHh-Ccc------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 9999999999632 111 1 146788999999999999 9999999 999999999999999999999876
Q ss_pred cCCCCCCc------ccccccCCCcccccccCCC
Q 001226 984 SDSHSSST------RSAIVGSLGYIAPENAYST 1010 (1119)
Q Consensus 984 ~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 1010 (1119)
........ -....+++.|+|||.+...
T Consensus 163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 54321111 1345688899999977643
No 425
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=5.6e-21 Score=232.11 Aligned_cols=246 Identities=28% Similarity=0.447 Sum_probs=131.5
Q ss_pred CCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEEeecccccccCCccccCCCCcCEEEcc
Q 001226 361 SLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLA 440 (1119)
Q Consensus 361 ~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 440 (1119)
+...|+++++.++ .+|..+. +.|+.|+|++|+|+. +|..+. ++|++|++++|+++ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 4566777777776 4454442 356667777776663 333332 35666666666665 3444332 245555555
Q ss_pred CccCcccchhhhhccCCccceeccccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccC
Q 001226 441 HNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGS 520 (1119)
Q Consensus 441 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 520 (1119)
+|+++ .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|+|++
T Consensus 250 ~N~L~-~LP~~l~---------------------------s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~- 297 (754)
T PRK15370 250 INRIT-ELPERLP---------------------------SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT- 297 (754)
T ss_pred CCccC-cCChhHh---------------------------CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-
Confidence 55554 3333221 23444455555444 3343332 345555555555553
Q ss_pred CCccccCCCCcceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccC
Q 001226 521 LPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKC 600 (1119)
Q Consensus 521 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 600 (1119)
+|..+. ++|+.|++++|+++. +|..+ .++|+.|++++|.++ .+|..+. ++|+.|+|++|+|. .+|..+.
T Consensus 298 LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp-- 366 (754)
T PRK15370 298 LPAHLP--SGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQIT-VLPETLP-- 366 (754)
T ss_pred Ccccch--hhHHHHHhcCCcccc-CCccc--cccceeccccCCccc-cCChhhc--CcccEEECCCCCCC-cCChhhc--
Confidence 232221 245556666666653 34322 245666667776666 3555543 46677777777666 4555442
Q ss_pred CCCcEEeccCccccccCChhhhhcccCCeeEccCccCccCCCcccc----ccccccEeecCCcccC
Q 001226 601 TKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSGAIPDAFS----SVQSLFELQLGSNIFD 662 (1119)
Q Consensus 601 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~L~~N~l~ 662 (1119)
++|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+ .+|..+. .++++..|+|.+|.++
T Consensus 367 ~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 367 PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 46667777777766 3555543 24666666666666 3444332 2345555555555554
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=1.5e-20 Score=185.63 Aligned_cols=199 Identities=21% Similarity=0.290 Sum_probs=170.2
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecc--cccccHHHHHHHHhhcCC-CCEEEEeeeeecCCceEEEEeccCC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLN--RSETNFDVEIRTLSLVRH-RNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~--~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+|...++||+|+||.+|.|....+|..||||+-. ....+...|.++.+.+++ ..|..+..+..+.....+||+.. |
T Consensus 16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-G 94 (341)
T KOG1163|consen 16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-G 94 (341)
T ss_pred ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-C
Confidence 4556689999999999999999999999999864 344678889999999974 56777777888888899999998 8
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC---CceEEEeccccccccCCCC
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE---LEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~vkl~DfGla~~~~~~~~ 988 (1119)
-+|.+.+.-+.. .++.+++.-.+.|++.-++|+|.+ +++||||||+|++..-+ ..+.++|||+|+.+.+...
T Consensus 95 PsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 95 PSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred ccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 899999987764 488999999999999999999999 99999999999999754 4578999999998765432
Q ss_pred -----CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 001226 989 -----SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSF 1039 (1119)
Q Consensus 989 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~ 1039 (1119)
+.......||.+|.+-....+.+.+.+.|+-|+|.|+.++-.|..||.+..
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 233455689999999888888888999999999999999999999998753
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=6.3e-21 Score=231.69 Aligned_cols=187 Identities=26% Similarity=0.419 Sum_probs=100.3
Q ss_pred ccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCccccccccceEEecc
Q 001226 482 NLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFS 561 (1119)
Q Consensus 482 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 561 (1119)
+|+.|+|++|++. .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|+|++ +|..+. ++|+.|+++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQ 312 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhc
Confidence 5666666666666 5555543 46777777777776 3454443 356666666666663 443332 356666666
Q ss_pred CCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCCeeEccCccCccCC
Q 001226 562 ENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSGAI 641 (1119)
Q Consensus 562 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 641 (1119)
+|+++ .+|..+. ++|+.|++++|.++ .+|..+. ++|+.|+|++|+|+ .+|..+. +.|+.|+|++|+|+ .+
T Consensus 313 ~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 313 SNSLT-ALPETLP--PGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NL 382 (754)
T ss_pred CCccc-cCCcccc--ccceeccccCCccc-cCChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CC
Confidence 66665 3444332 45666666666665 3454432 45666666666655 3454432 35555555555555 33
Q ss_pred CccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCcccccccccccceeeccCceec
Q 001226 642 PDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQILDLSSNSFS 711 (1119)
Q Consensus 642 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 711 (1119)
|..+. .+|+.|++++|+++ .+|..+ |..++.++.+..|+|.+|+|+
T Consensus 383 P~~l~--~sL~~LdLs~N~L~-~LP~sl---------------------~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 383 PENLP--AALQIMQASRNNLV-RLPESL---------------------PHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CHhHH--HHHHHHhhccCCcc-cCchhH---------------------HHHhhcCCCccEEEeeCCCcc
Confidence 43332 23444444444443 233222 222333456667777777776
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=2.7e-21 Score=230.80 Aligned_cols=249 Identities=22% Similarity=0.279 Sum_probs=187.4
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEecc----ccccc------HHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLN----RSETN------FDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~----~~~~~------~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
++++|.|++|.|+.+.........+.|.++ ....+ +..|.-+-..++|||++..+..+.+....+-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 478999999988887766655555555443 11111 33455556778999999998888777666666999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS 988 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 988 (1119)
+++ +|+..+.... .+...++..++.|+..|++|+|+. |+.|||+||+|++++.+|.+||+|||.+....-...
T Consensus 403 ~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 403 CPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred ccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 999 9999998763 377888999999999999999999 999999999999999999999999999887654333
Q ss_pred C--CcccccccCCCcccccccCCCCCCC-cchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 989 S--STRSAIVGSLGYIAPENAYSTRLTE-KSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 989 ~--~~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
. ......+|...|+|||++.+.+|++ ..||||.|+++..|.+|+.||......+........ ... ...
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~-----~~~-~~~--- 546 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY-----SDQ-RNI--- 546 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc-----ccc-ccc---
Confidence 3 4456678999999999999999875 589999999999999999999765443332100000 000 000
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVG 1104 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~ 1104 (1119)
...........+.+...++.+|++++|.+|.|+++|++
T Consensus 547 -~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 547 -FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00011112344567789999999999999999999986
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.80 E-value=2e-18 Score=197.28 Aligned_cols=258 Identities=29% Similarity=0.367 Sum_probs=193.0
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEecccc-------cccHHHHHHHHhhcCCC-CEEEEeeeeecCCceEEEEe
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-------ETNFDVEIRTLSLVRHR-NILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lV~e 907 (1119)
|+..+.+|.|+||.||++.+. ..+++|.+... ...+.+|+..++.+.|+ +++++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 345678999999999999887 67889988432 34578899999999988 79999999977777899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC-ceEEEeccccccccCC
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL-EPKIGDFGMSKLISDS 986 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~vkl~DfGla~~~~~~ 986 (1119)
++.++++.+++........++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.++.....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 999999997776653212488889999999999999999999 999999999999999998 7999999999865443
Q ss_pred CCCC----cccccccCCCcccccccCC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccc
Q 001226 987 HSSS----TRSAIVGSLGYIAPENAYS---TRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHEC 1059 (1119)
Q Consensus 987 ~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1119)
.... ......++..|+|||...+ ..+....|+||+|++++++++|..||............+..... ....
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~- 233 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE-LPTP- 233 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHh-cCCc-
Confidence 2221 3456789999999998887 57889999999999999999999996543221000000000000 0000
Q ss_pred cccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1060 ICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
......... ........+.+++..|+..+|..|.++.+....
T Consensus 234 --~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 --SLASPLSPS--NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred --ccccccCcc--ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000 001223467899999999999999999988765
No 430
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=5.7e-21 Score=178.72 Aligned_cols=182 Identities=29% Similarity=0.509 Sum_probs=147.6
Q ss_pred ccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCCee
Q 001226 551 FWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSL 630 (1119)
Q Consensus 551 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 630 (1119)
.+++++.|.||+|+++ .+|..+..+.+|+.|++++|++. .+|..+..+++|+.|+++-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 5677788888888887 77778888888888888888887 78888888888888888888886 688888888888888
Q ss_pred EccCccCcc-CCCccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCcccccccccccceeeccCce
Q 001226 631 SLQENNLSG-AIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQILDLSSNS 709 (1119)
Q Consensus 631 ~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 709 (1119)
||..|++.. .+|..|..++.|+.|+|++|.|. .+|..++++.++. +|.++.|.+- .+|..++.|++|+.|.+.+|+
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lq-il~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQ-ILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhccee-EEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 888888873 57888888888888888888886 7888888888764 6888888888 799999999999999999999
Q ss_pred ecccCCccccccc---cceEEecccccccccCC
Q 001226 710 FSGEIPTEVNNMV---SLYFVNISFNHFSGKLP 739 (1119)
Q Consensus 710 l~g~ip~~~~~~~---~l~~l~ls~N~~~g~~p 739 (1119)
++ .+|++++++. +=+.+.+.+|++..+|-
T Consensus 185 l~-vlppel~~l~l~~~k~v~r~E~NPwv~pIa 216 (264)
T KOG0617|consen 185 LT-VLPPELANLDLVGNKQVMRMEENPWVNPIA 216 (264)
T ss_pred ee-ecChhhhhhhhhhhHHHHhhhhCCCCChHH
Confidence 98 8999988763 22445666776654433
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.77 E-value=6.9e-19 Score=181.42 Aligned_cols=134 Identities=19% Similarity=0.180 Sum_probs=104.7
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc-------------ccH-----------------HHHHHHHhhcCCCCE
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------------TNF-----------------DVEIRTLSLVRHRNI 889 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------------~~~-----------------~~E~~~l~~l~h~ni 889 (1119)
..||+|+||.||+|.+. +|++||||+++... ..| ..|++.++++.++++
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 57999999999999987 79999999985431 112 238899999987766
Q ss_pred EEEeeeeecCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEecCCCCCCeEeCC
Q 001226 890 LRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYL-HYDCVPQIIHRDIKSDNILLDS 968 (1119)
Q Consensus 890 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dlkp~Nill~~ 968 (1119)
.....+. ....++||||++++++........ .++...+..++.|++.++.|+ |+. ||+||||||+||+++
T Consensus 82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~~~---~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPIL--LKSHVLVMEFIGDDGWAAPRLKDA---PLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEE--ecCCEEEEEEeCCCCCcchhhhcC---CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 3222221 123389999999887765432222 478889999999999999999 677 999999999999998
Q ss_pred CCceEEEeccccccc
Q 001226 969 ELEPKIGDFGMSKLI 983 (1119)
Q Consensus 969 ~~~vkl~DfGla~~~ 983 (1119)
++.++++|||+|...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 478999999999754
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=1.2e-18 Score=186.10 Aligned_cols=227 Identities=20% Similarity=0.272 Sum_probs=143.5
Q ss_pred CCceeeecCCccEEEEEeCCCceEEEEEeccc-------ccccHHHHHHHHhhcC----------CCCEEEEeeee----
Q 001226 838 EGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-------SETNFDVEIRTLSLVR----------HRNILRIVGSC---- 896 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-------~~~~~~~E~~~l~~l~----------h~niv~l~~~~---- 896 (1119)
.++.||.|+++.||.+.+..+++++|+|++.. ..+++++|.-....+. |-.++.-++..
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 45789999999999999999999999998832 1233455554443322 11222212211
Q ss_pred -----ecC---C-----ceEEEEeccCCCCHHHhhcc---CCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 001226 897 -----TKD---E-----HGFIVTEYMPGGTLFNVLHQ---NEP-RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDI 959 (1119)
Q Consensus 897 -----~~~---~-----~~~lV~e~~~~gsL~~~l~~---~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 959 (1119)
... . ..+++|+-+ .++|.+++.. ... ...+....+..+..|+++.+++||+. |+||+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 111 1 236788877 5688777543 221 12234445567778999999999999 9999999
Q ss_pred CCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCC--------CCCCCcchHHHHHHHHHHHHhC
Q 001226 960 KSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYS--------TRLTEKSDVYSYGVILFELLFR 1031 (1119)
Q Consensus 960 kp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~vl~elltg 1031 (1119)
+|+|++++.+|.+.++||+.....+.... ....+..|.+||.... -.++.+.|.|++|+++|.|++|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYR-----CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEE-----GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceee-----ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 99999999999999999998776543211 1234577999995533 2468899999999999999999
Q ss_pred CCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCC
Q 001226 1032 KMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMR 1096 (1119)
Q Consensus 1032 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 1096 (1119)
+.||+....+..... .+.. . ...+..+..++..+++++|++|
T Consensus 247 ~lPf~~~~~~~~~~~-------------------~f~~--C--~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW-------------------DFSR--C--RDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG-------------------GGTT--S--S---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc-------------------cchh--c--CCcCHHHHHHHHHHccCCcccC
Confidence 999986422211111 1111 1 1456788999999999999988
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=6.4e-18 Score=171.00 Aligned_cols=182 Identities=12% Similarity=0.145 Sum_probs=136.5
Q ss_pred CCceeeecCCccEEEEEeCCCceEEEEEecccccc--------cHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEec
Q 001226 838 EGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSET--------NFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
++..|++|+||+||.+.. .+.+++.+.+..... .+.+|+++++++. |+++++++++ ...+++|||
T Consensus 6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 357899999999997755 468888777754433 3678999999995 5889999886 346899999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC-CCCCeEeCCCCceEEEeccccccccCCC
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDI-KSDNILLDSELEPKIGDFGMSKLISDSH 987 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~Nill~~~~~vkl~DfGla~~~~~~~ 987 (1119)
++|.+|...... ....++.|+++++.++|+. ||+|||| ||+||+++.++.++|+|||+|.......
T Consensus 80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999988654321 1134678999999999999 9999999 7999999999999999999998554322
Q ss_pred CC----Cc-------ccccccCCCcccccccCC-CCCC-CcchHHHHHHHHHHHHhCCCCCCCC
Q 001226 988 SS----ST-------RSAIVGSLGYIAPENAYS-TRLT-EKSDVYSYGVILFELLFRKMPVDPS 1038 (1119)
Q Consensus 988 ~~----~~-------~~~~~gt~~y~aPE~~~~-~~~~-~~sDvwslG~vl~elltg~~p~~~~ 1038 (1119)
.. .. ......++.|++|+...- ...+ .+.+.++-|+-+|.++||+.|+...
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 10 00 011235777888873321 1223 5678999999999999999987643
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=2.8e-20 Score=174.14 Aligned_cols=160 Identities=34% Similarity=0.525 Sum_probs=96.3
Q ss_pred cceeccccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccC
Q 001226 459 LSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRG 538 (1119)
Q Consensus 459 L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 538 (1119)
...|.||+|+++ .+|..+..+.+|+.|++++|++. .+|..++.+++|+.|++.-|++. ..|..|+.+|.|+.|||.+
T Consensus 35 ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlty 111 (264)
T KOG0617|consen 35 ITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTY 111 (264)
T ss_pred hhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccc
Confidence 344445555554 45556666666666666666666 56666666666666666666665 5566666666666666666
Q ss_pred cccCC-CCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccC
Q 001226 539 NLLQG-SIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSI 617 (1119)
Q Consensus 539 N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 617 (1119)
|++.. .+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+..|.+- .+|.+++.++.|++|.+.+|+++ .+
T Consensus 112 nnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vl 188 (264)
T KOG0617|consen 112 NNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VL 188 (264)
T ss_pred cccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ec
Confidence 66543 45555556666666666666665 55566666666666666666655 45666666666666666666665 45
Q ss_pred Chhhhhc
Q 001226 618 PSEVISL 624 (1119)
Q Consensus 618 p~~~~~l 624 (1119)
|.+++++
T Consensus 189 ppel~~l 195 (264)
T KOG0617|consen 189 PPELANL 195 (264)
T ss_pred Chhhhhh
Confidence 5555443
No 435
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=9.1e-20 Score=207.08 Aligned_cols=277 Identities=25% Similarity=0.256 Sum_probs=144.6
Q ss_pred EEccCCccCCccChhhhhcCCCccEEEcCCCccCCC----cchhhcCCCCCceeeeccccccc------cCcccccCCCC
Q 001226 244 FSASSNNFGGAISPWIFKGLLQLEVLYLDDNNLEGQ----IPETLWGLENLQKLVLSANKLNG------TISGQISHCNQ 313 (1119)
Q Consensus 244 L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~------~~~~~~~~l~~ 313 (1119)
|+|..+.+++.-....|..+.+|++|+++++.+++. ++..+...++|++|+++++.+.+ ..+..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 455555555444455666666677777777766432 34445556667777777766652 12334555666
Q ss_pred CcEEEccccccccccCcccCCCCC---CCeEEccCCcccC----CCCCCCCCC-CCCcEEEcccCcCccc----Cchhhh
Q 001226 314 LQVIALSRNNLVGQIPRSVGNLSS---LNSLLLFNNRLQG----TLPPELGNC-GSLVDLRLQHNFIGGT----IPPEIC 381 (1119)
Q Consensus 314 L~~L~Ls~N~l~~~~~~~~~~l~~---L~~L~L~~N~l~~----~~~~~l~~l-~~L~~L~L~~N~i~~~----~~~~l~ 381 (1119)
|++|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|++|++++|.+++. ++..+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 162 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH
Confidence 666666666665444444444433 6666666666652 112233444 5666666666666532 223344
Q ss_pred cccccceeeccCccccCC----CCccccccCcceEEEeeccccccc----CCccccCCCCcCEEEccCccCcccchhhhh
Q 001226 382 NLAKLEVLYLFNNRIEGA----IPHQIGRMSKLVELALYNNRLTGR----IPPDITRLRNLQFLSLAHNHLTGEVALELG 453 (1119)
Q Consensus 382 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 453 (1119)
.+++|++|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++.....+.
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~ 242 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALA 242 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHH
Confidence 555666666666666532 122233445666666666665532 223344556666666666666543333332
Q ss_pred ccC----CccceeccccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccC----CCccc
Q 001226 454 KHF----PYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGS----LPATL 525 (1119)
Q Consensus 454 ~~l----~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~ 525 (1119)
..+ +.|++|++++|.++.... ..+...+..+++|+++++++|.+... ....+
T Consensus 243 ~~~~~~~~~L~~L~l~~n~i~~~~~--------------------~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~ 302 (319)
T cd00116 243 SALLSPNISLLTLSLSCNDITDDGA--------------------KDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESL 302 (319)
T ss_pred HHHhccCCCceEEEccCCCCCcHHH--------------------HHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHH
Confidence 222 345555555554431100 11222333445566666666665532 22333
Q ss_pred cCC-CCcceeeccCcc
Q 001226 526 ERN-PGVSFLDVRGNL 540 (1119)
Q Consensus 526 ~~l-~~L~~L~l~~N~ 540 (1119)
... +.|+.+++.+|.
T Consensus 303 ~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 303 LEPGNELESLWVKDDS 318 (319)
T ss_pred hhcCCchhhcccCCCC
Confidence 333 556666665554
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.75 E-value=6.3e-18 Score=175.27 Aligned_cols=136 Identities=19% Similarity=0.197 Sum_probs=107.6
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEecccccc------------------------------cHHHHHHHHhhcCCCC
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSET------------------------------NFDVEIRTLSLVRHRN 888 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------------------------------~~~~E~~~l~~l~h~n 888 (1119)
.+.||+|+||.||+|.+. +|+.||||+++.... ...+|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 367999999999999987 799999999864311 1246888899999888
Q ss_pred EEEEeeeeecCCceEEEEeccCCCCHHHh-hccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEe
Q 001226 889 ILRIVGSCTKDEHGFIVTEYMPGGTLFNV-LHQNEPRLVLDWNTRYHIALGIAQGLSYLHY-DCVPQIIHRDIKSDNILL 966 (1119)
Q Consensus 889 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill 966 (1119)
+.....+... ..++||||++|+++... +... .++......++.|++.++.++|+ . ||+||||||+||++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~----~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDV----PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhhhc----cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 7433333222 24899999998855433 3322 36778899999999999999999 7 99999999999999
Q ss_pred CCCCceEEEeccccccccC
Q 001226 967 DSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 967 ~~~~~vkl~DfGla~~~~~ 985 (1119)
+ ++.++++|||++.....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 88999999999986543
No 437
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.75 E-value=1.1e-18 Score=181.09 Aligned_cols=164 Identities=12% Similarity=0.145 Sum_probs=126.5
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEecccc----cc---------cHHHHHHHHhhcCCCCEEEEeeeeecC--
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ET---------NFDVEIRTLSLVRHRNILRIVGSCTKD-- 899 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~---------~~~~E~~~l~~l~h~niv~l~~~~~~~-- 899 (1119)
+|...+++|.|+||.||++.. . +..+|+|+++.. +. .+++|+..+.++.||+|....+++...
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~-~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-D-YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-C-CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 455668999999999999765 3 668999998532 11 157899999999999999998875532
Q ss_pred ------CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceE
Q 001226 900 ------EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPK 973 (1119)
Q Consensus 900 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vk 973 (1119)
+..++||||++|.+|.++.. .+. ....+++.++..+|+. |++|||++|+||+++++| ++
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EE
Confidence 35789999999999988732 222 2456899999999999 999999999999999988 99
Q ss_pred EEeccccccccCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHH
Q 001226 974 IGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELL 1029 (1119)
Q Consensus 974 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ell 1029 (1119)
++|||........... ..+.....+..++|+|++|+.+..+.
T Consensus 175 liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999987644221100 11344556778999999999887654
No 438
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=1.2e-19 Score=206.19 Aligned_cols=264 Identities=25% Similarity=0.238 Sum_probs=136.9
Q ss_pred ccCCcccEEEcCCCcccC----CCCcccccCCCccEEEcccccccc------cCCccccccCccCEEEccCccccCCCCc
Q 001226 93 CKNQHLLSLDLSGNEFTG----SIPKQLGNCGQLKTLLLNDNRFQG------SIPPEIFKLKRLSWLDLGYNSLSGKIPP 162 (1119)
Q Consensus 93 ~~l~~l~~L~Ls~n~~~~----~~~~~l~~l~~L~~L~L~~n~i~~------~~p~~l~~l~~L~~L~Ls~n~l~~~~p~ 162 (1119)
..+.+|++|+++++.+++ .++..+...+.|++|+++++.+.+ .++..+..+++|++|+|++|.+.+..+.
T Consensus 20 ~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~ 99 (319)
T cd00116 20 PKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCG 99 (319)
T ss_pred HHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHH
Confidence 344556666666666543 244445555666666666665541 1233444455666666666655544444
Q ss_pred ccccccccceeeecccccccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCC-CCC
Q 001226 163 QVSLCYSLESIGFHNNFLNGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNC-RNL 241 (1119)
Q Consensus 163 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l-~~L 241 (1119)
.+..+.+ . ++|++|++++|++++... ..+...+..+ ++|
T Consensus 100 ~~~~l~~--------------------~-~~L~~L~ls~~~~~~~~~-------------------~~l~~~l~~~~~~L 139 (319)
T cd00116 100 VLESLLR--------------------S-SSLQELKLNNNGLGDRGL-------------------RLLAKGLKDLPPAL 139 (319)
T ss_pred HHHHHhc--------------------c-CcccEEEeeCCccchHHH-------------------HHHHHHHHhCCCCc
Confidence 4433333 0 125555555444432100 0111223333 445
Q ss_pred cEEEccCCccCCccC---hhhhhcCCCccEEEcCCCccCCC----cchhhcCCCCCceeeeccccccccC----cccccC
Q 001226 242 VEFSASSNNFGGAIS---PWIFKGLLQLEVLYLDDNNLEGQ----IPETLWGLENLQKLVLSANKLNGTI----SGQISH 310 (1119)
Q Consensus 242 ~~L~l~~n~i~~~~~---~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~----~~~~~~ 310 (1119)
++|++++|++++... ...+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++.. ...+..
T Consensus 140 ~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~ 219 (319)
T cd00116 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLAS 219 (319)
T ss_pred eEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcc
Confidence 555555555442211 22344445566666666655532 2233344456666666666665332 233455
Q ss_pred CCCCcEEEccccccccccCcccC-----CCCCCCeEEccCCcccC----CCCCCCCCCCCCcEEEcccCcCccc----Cc
Q 001226 311 CNQLQVIALSRNNLVGQIPRSVG-----NLSSLNSLLLFNNRLQG----TLPPELGNCGSLVDLRLQHNFIGGT----IP 377 (1119)
Q Consensus 311 l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~i~~~----~~ 377 (1119)
+++|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..+++|+++++++|.++.. ..
T Consensus 220 ~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~ 299 (319)
T cd00116 220 LKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLA 299 (319)
T ss_pred cCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHH
Confidence 66677777777766642222221 23677888888887752 2233455567888888888888744 23
Q ss_pred hhhhcc-cccceeeccCccc
Q 001226 378 PEICNL-AKLEVLYLFNNRI 396 (1119)
Q Consensus 378 ~~l~~l-~~L~~L~L~~N~l 396 (1119)
..+... +.|+.+++.+|.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 300 ESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHhhcCCchhhcccCCCCC
Confidence 333344 6788888877753
No 439
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.73 E-value=6.8e-19 Score=207.24 Aligned_cols=243 Identities=21% Similarity=0.268 Sum_probs=172.3
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccccc-----ccHHHHHHH--HhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-----TNFDVEIRT--LSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
...+.+|++.|=.|.+|+++. |. |+||++-+.. +.+.++++. ...++|||++++.-+-..+...|+|-+|+
T Consensus 26 ~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv 103 (1431)
T KOG1240|consen 26 HYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV 103 (1431)
T ss_pred eeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence 344679999999999998876 44 8999884322 334444333 45568999999999888888889999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc--CCC
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS--DSH 987 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~--~~~ 987 (1119)
. -+|+|.+..++ .+...+.+.|+.|+..|+..+|.. ||+|||||.+|||+++=.=+.++||..-+... .+.
T Consensus 104 k-hnLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 104 K-HNLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred h-hhhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 4 58999888765 477778889999999999999999 99999999999999988778999997644321 111
Q ss_pred C---CCcccccccCCCcccccccCCC----------C-CCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhh
Q 001226 988 S---SSTRSAIVGSLGYIAPENAYST----------R-LTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWK 1052 (1119)
Q Consensus 988 ~---~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1052 (1119)
+ .........-.+|.|||.+... . .+++.||||+|||++|+++ |+.||... .+..+ +
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aY---r 248 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAY---R 248 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhH---h
Confidence 1 1111111223479999965431 1 5678999999999999997 67777532 11111 1
Q ss_pred hcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 001226 1053 LQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
..........+. . -....+..++..|++.||++|.++++.++.-
T Consensus 249 ~~~~~~~e~~Le-~---------Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 249 SGNADDPEQLLE-K---------IEDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred ccCccCHHHHHH-h---------CcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 110000000000 0 0112567999999999999999999999873
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=1e-17 Score=202.82 Aligned_cols=247 Identities=20% Similarity=0.198 Sum_probs=183.8
Q ss_pred HhhCCceeeecCCccEEEEEeCCCceEEEEEeccc-ccccHHHHHHHHhhcC---CCCEEEEeeeeecCCceEEEEeccC
Q 001226 835 RATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNR-SETNFDVEIRTLSLVR---HRNILRIVGSCTKDEHGFIVTEYMP 910 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~-~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~ 910 (1119)
.|.+.+.+|+|+||+||+|...+ |+.||+|+-+. ...+|..=..++.+++ -+.|+++..++.-.+..++|+||.+
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~ 777 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSP 777 (974)
T ss_pred eEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccc
Confidence 45566899999999999999988 99999998754 3345554455556665 3345555555566677789999999
Q ss_pred CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC-------CCceEEEeccccccc
Q 001226 911 GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS-------ELEPKIGDFGMSKLI 983 (1119)
Q Consensus 911 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-------~~~vkl~DfGla~~~ 983 (1119)
.|+|.+++...+ .++|.-...++.|+++.+++||.. +|||+||||+|+|+.. ...++|+|||.+..+
T Consensus 778 ~Gtlld~~N~~~---~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 778 YGTLLDLINTNK---VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred cccHHHhhccCC---CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 999999998544 589999999999999999999999 9999999999999953 245899999999877
Q ss_pred cCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
.--.........++|-.+-.+|...++.+++.+|.|.++.+++-|+.|++.- .+.... ..+
T Consensus 852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-----------~~~g~~--------~~~ 912 (974)
T KOG1166|consen 852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-----------VKNGSS--------WMV 912 (974)
T ss_pred eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-----------hcCCcc--------eec
Confidence 5444444556678899999999999999999999999999999999998542 000000 000
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
+..++.. .. ..-+-++...+|+.|-..=|...++...++...++
T Consensus 913 ~~~~~Ry--~~---~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 913 KTNFPRY--WK---RDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred cccchhh--hh---HHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence 1111100 01 12345666677776666677888888877776554
No 441
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.72 E-value=1.9e-17 Score=187.99 Aligned_cols=220 Identities=27% Similarity=0.459 Sum_probs=165.0
Q ss_pred HhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe-EecCC
Q 001226 881 LSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQI-IHRDI 959 (1119)
Q Consensus 881 l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i-vH~Dl 959 (1119)
|+.+.|.|+.+++|.+.++...++|.+|+..|+|.|.+.... ..+++.....++++++.|++|+|.. .| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 356789999999999999999999999999999999998743 3589999999999999999999987 44 89999
Q ss_pred CCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCCcccccccCCC-------CCCCcchHHHHHHHHHHHHhCC
Q 001226 960 KSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENAYST-------RLTEKSDVYSYGVILFELLFRK 1032 (1119)
Q Consensus 960 kp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwslG~vl~elltg~ 1032 (1119)
+++|+++|..+.+|++|||+.....+..............-|.|||.+... ..+.+.||||||++++|+++++
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998766431111122222345579999977653 1467799999999999999999
Q ss_pred CCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccc
Q 001226 1033 MPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLNDK 1112 (1119)
Q Consensus 1033 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~~ 1112 (1119)
.||+......... .... +... .....+.+.+.. ..+...++..++.+||..+|++||++++|-..++.+...
T Consensus 156 ~~~~~~~~~~~~~-eii~-~~~~--~~~~~~rP~i~~----~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 156 GPFDLRNLVEDPD-EIIL-RVKK--GGSNPFRPSIEL----LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred CccccccccCChH-HHHH-HHHh--cCCCCcCcchhh----hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 9998643333221 1111 1111 001111111111 112333688999999999999999999999999988776
Q ss_pred C
Q 001226 1113 N 1113 (1119)
Q Consensus 1113 ~ 1113 (1119)
.
T Consensus 228 ~ 228 (484)
T KOG1023|consen 228 G 228 (484)
T ss_pred c
Confidence 4
No 442
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.70 E-value=3.3e-18 Score=193.16 Aligned_cols=221 Identities=24% Similarity=0.308 Sum_probs=174.9
Q ss_pred eeecCCccEEEEE---eCCCceEEEEEecccc------cccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEeccCC
Q 001226 842 IGKGKHGTVYRTL---SNNSRKHWAVKKLNRS------ETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEYMPG 911 (1119)
Q Consensus 842 lG~G~fg~Vy~~~---~~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~ 911 (1119)
+|.|.||.|++++ ..+.+.-+|+|+.++. ......|..++...+ ||.+|++...+..+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 7899999998654 3445677888877432 224556778888887 99999999999999999999999999
Q ss_pred CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCc
Q 001226 912 GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSST 991 (1119)
Q Consensus 912 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~ 991 (1119)
|.+...+.... .+++.....+...++-+++++|+. +++|||+|++||+++.+|++++.|||+++..-+....
T Consensus 82 g~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 82 GDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred chhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence 99988877655 367777778888899999999999 9999999999999999999999999999866442211
Q ss_pred ccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCC
Q 001226 992 RSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWD 1071 (1119)
Q Consensus 992 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1119)
+||..|||||+.. .+..++|.||||++++||++|..||.. + ..+.. +....
T Consensus 154 ----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------~---~~~~I--------------l~~~~ 204 (612)
T KOG0603|consen 154 ----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------D---TMKRI--------------LKAEL 204 (612)
T ss_pred ----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------H---HHHHH--------------hhhcc
Confidence 7899999999887 567899999999999999999999864 0 00100 11112
Q ss_pred chHHHHHHHHHHHHHHccccCCCCCCCH
Q 001226 1072 SDDQLKALRLLELALECTRQVADMRPSM 1099 (1119)
Q Consensus 1072 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 1099 (1119)
..+......+.+++..+...+|..|.-.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 2344555567788888888889888755
No 443
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=8.9e-17 Score=169.80 Aligned_cols=197 Identities=23% Similarity=0.270 Sum_probs=134.3
Q ss_pred CCCCEEEEeeeeec---------------------------CCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHH
Q 001226 885 RHRNILRIVGSCTK---------------------------DEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIAL 937 (1119)
Q Consensus 885 ~h~niv~l~~~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 937 (1119)
+|||||++..+|.+ ....|+||...+ .+|..|+..+. .+.....-+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC----CchHHHHHHHH
Confidence 59999999988753 234588888774 58888888654 45567778899
Q ss_pred HHHHHHHHHHhCCCCCeEecCCCCCCeEeC--CCC--ceEEEeccccccccCC----CCCCcccccccCCCcccccccCC
Q 001226 938 GIAQGLSYLHYDCVPQIIHRDIKSDNILLD--SEL--EPKIGDFGMSKLISDS----HSSSTRSAIVGSLGYIAPENAYS 1009 (1119)
Q Consensus 938 ~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~--~vkl~DfGla~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~ 1009 (1119)
|+.+|+.|||.+ ||.|||+|++||++. +|+ ...|+|||++---..- .+....-...|.-.-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 999999999999993 333 4689999986422110 01111112346667899997654
Q ss_pred CC------CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHH
Q 001226 1010 TR------LTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLE 1083 (1119)
Q Consensus 1010 ~~------~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1083 (1119)
.+ -..++|.|+.|.+.||+++..-||+......-+...+... .++ .-+...+..+.+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~--------------qLP---alp~~vpp~~rq 488 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES--------------QLP---ALPSRVPPVARQ 488 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh--------------hCC---CCcccCChHHHH
Confidence 22 2358999999999999999999998621111111111110 011 111223446789
Q ss_pred HHHHccccCCCCCCCHHHHHHHH
Q 001226 1084 LALECTRQVADMRPSMREVVGFL 1106 (1119)
Q Consensus 1084 l~~~cl~~dP~~RPs~~ell~~L 1106 (1119)
++...++.||.+||+..-....+
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHH
Confidence 99999999999999876554443
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.68 E-value=2.3e-16 Score=163.93 Aligned_cols=132 Identities=20% Similarity=0.316 Sum_probs=103.9
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEecccc----cccHHHHHHHHhhc-----CCCCEEEEeeeeecCC---ceE-
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS----ETNFDVEIRTLSLV-----RHRNILRIVGSCTKDE---HGF- 903 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~----~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~- 903 (1119)
+..+.||+|+||.||. +..++.. +||++... ...+.+|++.++.+ .||||++++|++.++. ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 4557899999999995 6665555 69987542 45688999999999 5799999999998763 333
Q ss_pred EEEec--cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEecCCCCCCeEeCC----CCceEEEe
Q 001226 904 IVTEY--MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGL-SYLHYDCVPQIIHRDIKSDNILLDS----ELEPKIGD 976 (1119)
Q Consensus 904 lV~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dlkp~Nill~~----~~~vkl~D 976 (1119)
+|+|| +++++|.+++.+.. +++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.++|+|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 78999 55799999997632 4444 35677777777 999999 9999999999999974 34799999
Q ss_pred cccc
Q 001226 977 FGMS 980 (1119)
Q Consensus 977 fGla 980 (1119)
|+.+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 5433
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.64 E-value=7.7e-16 Score=164.33 Aligned_cols=138 Identities=21% Similarity=0.252 Sum_probs=108.2
Q ss_pred hhCCceeeecCCccEEEEE-eCCCceEEEEEeccccc----------------------------ccHHHHHHHHhhcCC
Q 001226 836 ATEGRIIGKGKHGTVYRTL-SNNSRKHWAVKKLNRSE----------------------------TNFDVEIRTLSLVRH 886 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~-~~~~~~~vavK~~~~~~----------------------------~~~~~E~~~l~~l~h 886 (1119)
|...+.||+|+||.||+|. +..+|+.||+|+++... ..+..|+..+.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4456899999999999998 66679999999885321 114579999998875
Q ss_pred C--CEEEEeeeeecCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEecCCCCCC
Q 001226 887 R--NILRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQ-IIHRDIKSDN 963 (1119)
Q Consensus 887 ~--niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlkp~N 963 (1119)
. .+.+++++ ...++||||++++++..+..... .....++..++.|++.++.++|+. + ++||||||+|
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~N 179 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYN 179 (237)
T ss_pred cCCCCCeeeEe----cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhh
Confidence 3 34455543 23589999999988876543322 245556789999999999999999 9 9999999999
Q ss_pred eEeCCCCceEEEecccccccc
Q 001226 964 ILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 964 ill~~~~~vkl~DfGla~~~~ 984 (1119)
|+++ ++.++++|||.+....
T Consensus 180 Ili~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEEE-CCCEEEEEChhhhccC
Confidence 9999 8899999999987543
No 446
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=1.1e-16 Score=189.21 Aligned_cols=205 Identities=26% Similarity=0.355 Sum_probs=140.1
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEecccccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHHHhh
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLFNVL 918 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l 918 (1119)
.|.|-.|+||.||.++++.+.+++|+|. +++..-.++ ++.....|.+| |+=.+.+
T Consensus 88 IklisngAygavylvrh~~trqrfa~ki-Nkq~lilRn---ilt~a~npfvv---------------------gDc~tll 142 (1205)
T KOG0606|consen 88 IKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLILRN---ILTFAGNPFVV---------------------GDCATLL 142 (1205)
T ss_pred eEeeccCCCCceeeeeccccccchhhcc-cccchhhhc---cccccCCccee---------------------chhhhhc
Confidence 3789999999999999999999999954 333221111 22222334333 2223333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCC----------
Q 001226 919 HQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHS---------- 988 (1119)
Q Consensus 919 ~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~---------- 988 (1119)
+..+. ++. +++.+++|+|+. ||||||+||+|.+|+.-|++|+.|||+++..-....
T Consensus 143 k~~g~---lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k 208 (1205)
T KOG0606|consen 143 KNIGP---LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEK 208 (1205)
T ss_pred ccCCC---Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHH
Confidence 33221 221 237899999999 999999999999999999999999999875321110
Q ss_pred ---CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccccc
Q 001226 989 ---SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFLDR 1065 (1119)
Q Consensus 989 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1119)
.......+||+.|+|||++..+.|+.++|.|++|+++||++-|++||++...++-- ..++.
T Consensus 209 ~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelf---------------g~vis- 272 (1205)
T KOG0606|consen 209 DTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF---------------GQVIS- 272 (1205)
T ss_pred HHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH---------------hhhhh-
Confidence 11223468999999999999999999999999999999999999999764222110 00000
Q ss_pred cccCCCchHHHHHHHHHHHHHHccccCCCCCCC
Q 001226 1066 EISFWDSDDQLKALRLLELALECTRQVADMRPS 1098 (1119)
Q Consensus 1066 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 1098 (1119)
+...|...+.....++.+++.+.++.+|.+|--
T Consensus 273 d~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 273 DDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hhccccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 011111222333456778899999999999863
No 447
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.62 E-value=1e-16 Score=177.69 Aligned_cols=176 Identities=26% Similarity=0.331 Sum_probs=133.3
Q ss_pred CceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccc
Q 001226 900 EHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGM 979 (1119)
Q Consensus 900 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGl 979 (1119)
...|+.|+++.-.+|.+|+.+.+.....++.....++.|++.|+.| + +.+|||+||.||+...+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 3568999999999999999877666678888999999999999999 6 899999999999999999999999999
Q ss_pred cccccCCC----CCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCceeehhhhhhc
Q 001226 980 SKLISDSH----SSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLF-RKMPVDPSFGEDTDIVTWTRWKLQ 1054 (1119)
Q Consensus 980 a~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1054 (1119)
........ .....+..+||.+||+||.+.+..|+.++||||+|++++|++. -..+++.. ..
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~----~t---------- 468 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI----AT---------- 468 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----Hh----------
Confidence 88765533 2334566789999999999999999999999999999999996 22222211 00
Q ss_pred ccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 001226 1055 ENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREV 1102 (1119)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~el 1102 (1119)
...+-+..++ .........-..++++++...|.+||++.+.
T Consensus 469 ----~~d~r~g~ip---~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 469 ----LTDIRDGIIP---PEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ----hhhhhcCCCC---hHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 0111111111 0000011122578999999999999955444
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.59 E-value=4.4e-15 Score=157.51 Aligned_cols=130 Identities=22% Similarity=0.276 Sum_probs=109.7
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc------------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE------------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
+.||+|++|.||+|.. .+..|++|+..... ..+.+|+..+..++|+++.....++.+....++|||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5699999999999987 46788999754211 246679999999999988776666667778899999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
|++|++|.+++.... + .+..++.+++.++.++|.. +++|||++|.||+++ ++.++++|||.+..
T Consensus 80 ~~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999986532 1 7788999999999999999 999999999999999 78899999998864
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.57 E-value=8.4e-15 Score=153.34 Aligned_cols=132 Identities=22% Similarity=0.225 Sum_probs=104.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEeccccc--------------------------ccHHHHHHHHhhcCCC--
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE--------------------------TNFDVEIRTLSLVRHR-- 887 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------------------------~~~~~E~~~l~~l~h~-- 887 (1119)
|...+.||+|+||.||++... +++.||||+++... .....|...+..+.|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 445688999999999999876 58999999864221 1245688888888777
Q ss_pred CEEEEeeeeecCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeC
Q 001226 888 NILRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLD 967 (1119)
Q Consensus 888 niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 967 (1119)
.+++.++. ...++||||++|++|.+.... .....++.+++.++.++|+. +++||||||+||+++
T Consensus 96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~ 159 (198)
T cd05144 96 PVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVD 159 (198)
T ss_pred CCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEc
Confidence 44444442 345899999999998765321 23457889999999999998 999999999999999
Q ss_pred CCCceEEEecccccccc
Q 001226 968 SELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 968 ~~~~vkl~DfGla~~~~ 984 (1119)
+++.++++|||.+....
T Consensus 160 ~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 160 DDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCCcEEEEECCccccCC
Confidence 99999999999986543
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.57 E-value=6.2e-15 Score=178.01 Aligned_cols=131 Identities=23% Similarity=0.290 Sum_probs=107.3
Q ss_pred hhCCceeeecCCccEEEEEeCCCceEEEEEec--c---cc-------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceE
Q 001226 836 ATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKL--N---RS-------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGF 903 (1119)
Q Consensus 836 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~--~---~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 903 (1119)
+...+.||+|+||+||+|.+... .+++|+. + .. ...+.+|+++++.++|++++....++.++...+
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 34568999999999999987653 3344332 1 10 134678999999999999988877777777789
Q ss_pred EEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 904 IVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 904 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
+||||+++++|.+++. ....++.++++++.|+|+. +++|||+||+||++ .++.++++|||+++..
T Consensus 413 lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999998875 3457899999999999999 99999999999999 6789999999998743
No 451
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.57 E-value=7.8e-15 Score=154.03 Aligned_cols=126 Identities=24% Similarity=0.301 Sum_probs=102.4
Q ss_pred eeeecCCccEEEEEeCCCceEEEEEecccc------------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEec
Q 001226 841 IIGKGKHGTVYRTLSNNSRKHWAVKKLNRS------------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 841 ~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
.||+|+||.||+|.. .+..|++|+.... ...+.+|++.++.++|+++.....++......++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 389999999999985 3678999985321 13356799999999888755444444556677899999
Q ss_pred cCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 909 MPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 909 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
++|++|.+++..... .++.++++++.++|+. +++|||++|+||+++ ++.++++|||.+..
T Consensus 79 ~~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGND----------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHH----------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999988764321 7899999999999999 999999999999999 88999999998864
No 452
>PLN03150 hypothetical protein; Provisional
Probab=99.55 E-value=1.4e-14 Score=176.48 Aligned_cols=147 Identities=36% Similarity=0.570 Sum_probs=97.1
Q ss_pred CCCcHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCc-----eeeeeeeecC--C--CceEEEecCCCcccccCccchhhhc
Q 001226 23 SPPSAISLVQFLDSLPKQSQSHLPWNQSVSTSAPC-----KWSGVSCYNN--S--SSLKALNLSGFGLSGVLNNSISYIC 93 (1119)
Q Consensus 23 ~~~~~~~ll~~~~~~~~~~~~~~~w~~~~~~~~~c-----~w~gv~C~~~--~--~~v~~l~l~~~~l~~~~~~~~~~~~ 93 (1119)
.++|..||++||+++..+. ..+|+. ++| .|.||+|... . .+|+.|+|+++++.|.+|.. ++
T Consensus 370 ~~~~~~aL~~~k~~~~~~~--~~~W~g-----~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~---i~ 439 (623)
T PLN03150 370 LLEEVSALQTLKSSLGLPL--RFGWNG-----DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPND---IS 439 (623)
T ss_pred CchHHHHHHHHHHhcCCcc--cCCCCC-----CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHH---Hh
Confidence 5668899999999986542 248963 244 7999999632 1 24667777777777666643 44
Q ss_pred cCCcccEEEcCCCcccCCCCcccccCCCccEEEcccccccccCCccccccCccCEEEccCccccCCCCcccccc-cccce
Q 001226 94 KNQHLLSLDLSGNEFTGSIPKQLGNCGQLKTLLLNDNRFQGSIPPEIFKLKRLSWLDLGYNSLSGKIPPQVSLC-YSLES 172 (1119)
Q Consensus 94 ~l~~l~~L~Ls~n~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l-~~L~~ 172 (1119)
.+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|+.++++++|++|+|++|.++|.+|..++.. .++..
T Consensus 440 ~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~ 519 (623)
T PLN03150 440 KLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRAS 519 (623)
T ss_pred CCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCce
Confidence 56666777777776666666666667777777777776666666666666667777776666666666665542 24445
Q ss_pred eeecccc
Q 001226 173 IGFHNNF 179 (1119)
Q Consensus 173 L~L~~n~ 179 (1119)
+++.+|.
T Consensus 520 l~~~~N~ 526 (623)
T PLN03150 520 FNFTDNA 526 (623)
T ss_pred EEecCCc
Confidence 5555543
No 453
>PLN03150 hypothetical protein; Provisional
Probab=99.54 E-value=8.1e-15 Score=178.56 Aligned_cols=90 Identities=34% Similarity=0.574 Sum_probs=45.3
Q ss_pred eeeccccccCCcccccccccccceeeccCceecccCCcccccc-ccceEEecccccccccCCCccccccccCCccccCCc
Q 001226 679 LNVSNNKLSGKIPECLGNLDKLQILDLSSNSFSGEIPTEVNNM-VSLYFVNISFNHFSGKLPASWTTLMVSYPGSFLGNS 757 (1119)
Q Consensus 679 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~~l~~l~ls~N~~~g~~p~~~~~~~~~~~~~~~~n~ 757 (1119)
|+|++|+++|.+|+.++++++|+.|||++|+|+|.+|..+... ..+.. ..+.+|+
T Consensus 471 LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~------------------------l~~~~N~ 526 (623)
T PLN03150 471 LDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRAS------------------------FNFTDNA 526 (623)
T ss_pred EECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCce------------------------EEecCCc
Confidence 3444444444555555555555555555555555555554432 12223 3455666
Q ss_pred ccccC---CCCCCCCCCcccceeeehhhHHHHHHHHHHHhh
Q 001226 758 ELCRQ---GNCGKNGRGHTRGRLAGIIIGVLLSVALLCALI 795 (1119)
Q Consensus 758 ~~c~~---~~c~~~~~~~~~~~~~~ii~~~~~~v~~~~~~~ 795 (1119)
.+|+. ..|.. ....+.+++++++++++++++++++
T Consensus 527 ~lc~~p~l~~C~~---~~~~~~~i~~~~~~~~~~l~~~~~~ 564 (623)
T PLN03150 527 GLCGIPGLRACGP---HLSVGAKIGIAFGVSVAFLFLVICA 564 (623)
T ss_pred cccCCCCCCCCcc---cCCCceEEEEEhHHHHHHHHHHHHH
Confidence 66653 34532 1234556777777665544444333
No 454
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=5e-15 Score=177.36 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=188.8
Q ss_pred hCCceeeecCCccEEEEEeC-CCceEEEEEeccccc------ccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEEEEec
Q 001226 837 TEGRIIGKGKHGTVYRTLSN-NSRKHWAVKKLNRSE------TNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFIVTEY 908 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~------~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 908 (1119)
...+.||+|+|+.|-.+... .....+|+|.+.... .....|..+-+.+. |+|++++++...+.+..+++.||
T Consensus 23 ~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~ 102 (601)
T KOG0590|consen 23 KLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSY 102 (601)
T ss_pred cccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCc
Confidence 33466999999999887663 334567777664321 12334666666666 99999999999999999999999
Q ss_pred cCCCCHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEecCCCCCCeEeCCCC-ceEEEeccccccccC
Q 001226 909 MPGGTLFNVL-HQNEPRLVLDWNTRYHIALGIAQGLSYLH-YDCVPQIIHRDIKSDNILLDSEL-EPKIGDFGMSKLISD 985 (1119)
Q Consensus 909 ~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~Dlkp~Nill~~~~-~vkl~DfGla~~~~~ 985 (1119)
..++++.+-+ +... ...+...+..+..|+..++.|+| .. +++|||+||+|.+++..+ ..+++|||+|..+..
T Consensus 103 s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 103 SDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999888 4332 13555667788999999999999 77 999999999999999999 999999999998876
Q ss_pred -CCCCCccccccc-CCCcccccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccccccccc
Q 001226 986 -SHSSSTRSAIVG-SLGYIAPENAYST-RLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICF 1062 (1119)
Q Consensus 986 -~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1119)
...........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++.....+.....|.......
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~------- 250 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF------- 250 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccccc-------
Confidence 444555556678 9999999988874 456889999999999999999999987655554444433322100
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1063 LDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
....| ........++..+++..+|+.|.+.+++...
T Consensus 251 ---~~~~~----~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 251 ---TQLPW----NSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ---ccCcc----ccCChhhhhcccccccCCchhcccccccccc
Confidence 01111 1122345688889999999999999987654
No 455
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.48 E-value=2.4e-13 Score=135.70 Aligned_cols=132 Identities=22% Similarity=0.291 Sum_probs=113.0
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccccc--ccHHHHHHHHhhcCC--CCEEEEeeeeecCCceEEEEeccCCCCH
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE--TNFDVEIRTLSLVRH--RNILRIVGSCTKDEHGFIVTEYMPGGTL 914 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL 914 (1119)
.+.+|+|.++.||++.... ..+++|...... ..+.+|+..++.++| .++++++++...++..+++|||++++.+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 4679999999999998764 678999986654 478999999999976 5899999988888889999999988777
Q ss_pred HHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 915 FNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 915 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 81 ~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 81 DEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 544 4456677899999999999986545799999999999999989999999998864
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.46 E-value=3e-15 Score=165.58 Aligned_cols=195 Identities=30% Similarity=0.456 Sum_probs=141.8
Q ss_pred cccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCccccccccceEEec
Q 001226 481 TNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNLTMLDF 560 (1119)
Q Consensus 481 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 560 (1119)
+.-...||+.|++. .+|.++..+..|+.+.|..|.+. .+|..++.+..|+++|++.|+++ .+|..++.++ |+.|-+
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIV 150 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEE
Confidence 33445666666666 66777777777777777777776 66777777777777777777776 5666666664 888888
Q ss_pred cCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCCeeEccCccCccC
Q 001226 561 SENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSGA 640 (1119)
Q Consensus 561 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 640 (1119)
++|+++ .+|+.++.+..|..||.+.|.+. .+|..++.+.+|+.|++..|++. .+|+++..| .|..||+|.|+++ .
T Consensus 151 sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 151 SNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-Y 225 (722)
T ss_pred ecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-e
Confidence 888887 78888888888888888888887 67778888888888888888887 577777754 5778888888888 7
Q ss_pred CCccccccccccEeecCCcccCCCccccchh--hccccceeeecccc
Q 001226 641 IPDAFSSVQSLFELQLGSNIFDGSIPCSLSK--LHHFSSILNVSNNK 685 (1119)
Q Consensus 641 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--l~~~~~~L~ls~N~ 685 (1119)
+|-.|.+|+.|++|.|.+|.+. +.|..+.. ..+.-++|+..-++
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 8888888888888888888886 55555432 22333445554443
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.46 E-value=3.6e-15 Score=164.91 Aligned_cols=195 Identities=31% Similarity=0.434 Sum_probs=151.7
Q ss_pred CCccceeccccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceee
Q 001226 456 FPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLD 535 (1119)
Q Consensus 456 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 535 (1119)
+..-...||+.|++. .+|..++.+..|..+.|..|.+. .+|..+.++..|+.|+|+.|+++ .+|..++.++ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 334456788888887 67888888888888888888888 78888888888888888888887 5676676665 78888
Q ss_pred ccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccc
Q 001226 536 VRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAG 615 (1119)
Q Consensus 536 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 615 (1119)
+++|+++ .+|..++....|..||.+.|++. .+|..++++.+|+.|.+..|++. .+|.++.. -.|..||+|.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-
Confidence 8888887 67777887888888888888887 77888888888888888888887 67777774 45788888888887
Q ss_pred cCChhhhhcccCCeeEccCccCccCCCccccc---cccccEeecCCcc
Q 001226 616 SIPSEVISLEKMQSLSLQENNLSGAIPDAFSS---VQSLFELQLGSNI 660 (1119)
Q Consensus 616 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---l~~L~~L~L~~N~ 660 (1119)
.+|-+|..|+.|++|-|.+|.|+ ..|..+.. ..=.++|+..-++
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 68888888888888888888888 56665543 3334555555553
No 458
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.45 E-value=2.6e-13 Score=140.92 Aligned_cols=133 Identities=23% Similarity=0.284 Sum_probs=95.0
Q ss_pred CceeeecCCccEEEEEeCCCceEEEEEeccccccc------H----------------------HHHHHHHhhcCCC--C
Q 001226 839 GRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETN------F----------------------DVEIRTLSLVRHR--N 888 (1119)
Q Consensus 839 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~------~----------------------~~E~~~l~~l~h~--n 888 (1119)
.+.||+|+||.||+|.+. ++++||||+++..... . ..|...+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999887 6899999987542211 1 2344444444332 2
Q ss_pred EEEEeeeeecCCceEEEEeccCCCCHHH-hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEe
Q 001226 889 ILRIVGSCTKDEHGFIVTEYMPGGTLFN-VLHQNEPRLVLDWNTRYHIALGIAQGLSYLHY-DCVPQIIHRDIKSDNILL 966 (1119)
Q Consensus 889 iv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill 966 (1119)
+.+.++. ...++||||++++.+.. .+.... .. .++..++.+++.++.++|. . +|+|||+||+||++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 3344432 24589999999854321 111111 11 5678899999999999998 7 99999999999999
Q ss_pred CCCCceEEEeccccccccC
Q 001226 967 DSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 967 ~~~~~vkl~DfGla~~~~~ 985 (1119)
+ ++.++++|||.+.....
T Consensus 149 ~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 149 D-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred E-CCcEEEEECcccccccC
Confidence 9 89999999999975543
No 459
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.45 E-value=5.8e-13 Score=142.60 Aligned_cols=134 Identities=22% Similarity=0.313 Sum_probs=104.5
Q ss_pred hCCceee-ecCCccEEEEEeCCCceEEEEEecccc-----------------cccHHHHHHHHhhcCCCCE--EEEeeee
Q 001226 837 TEGRIIG-KGKHGTVYRTLSNNSRKHWAVKKLNRS-----------------ETNFDVEIRTLSLVRHRNI--LRIVGSC 896 (1119)
Q Consensus 837 ~~~~~lG-~G~fg~Vy~~~~~~~~~~vavK~~~~~-----------------~~~~~~E~~~l~~l~h~ni--v~l~~~~ 896 (1119)
..+..+| .|+.|+||.+... +..++||.+... ...+.+|+..+..++|+++ ++.+++.
T Consensus 34 ~~~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~ 111 (239)
T PRK01723 34 QQARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAAR 111 (239)
T ss_pred hcCceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeee
Confidence 3457898 9999999999775 678899877421 1246779999999998774 6777764
Q ss_pred ecC-Cc---eEEEEeccCC-CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCc
Q 001226 897 TKD-EH---GFIVTEYMPG-GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELE 971 (1119)
Q Consensus 897 ~~~-~~---~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 971 (1119)
..+ +. .++|||+++| .+|.+++... .++.. .+.+++.++.++|+. ||+||||||+||+++.++.
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~ 180 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGK 180 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCC
Confidence 432 22 2599999997 6898887653 24433 357899999999999 9999999999999999999
Q ss_pred eEEEeccccccc
Q 001226 972 PKIGDFGMSKLI 983 (1119)
Q Consensus 972 vkl~DfGla~~~ 983 (1119)
++++|||.+...
T Consensus 181 v~LIDfg~~~~~ 192 (239)
T PRK01723 181 FWLIDFDRGELR 192 (239)
T ss_pred EEEEECCCcccC
Confidence 999999988743
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.38 E-value=2.9e-13 Score=158.25 Aligned_cols=242 Identities=30% Similarity=0.369 Sum_probs=155.3
Q ss_pred cccceeeccCccccCCCCccccccc-cccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCccccccccceEEe
Q 001226 481 TNLFVLVLGNNRFNGSFPIEIGKCS-SLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNLTMLD 559 (1119)
Q Consensus 481 ~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 559 (1119)
+.++.|++.+|+++ .+|.....++ +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+..++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 45566666666666 4555555553 6777777777776 44456677777777777777776 4555555677888888
Q ss_pred ccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCCeeEccCccCcc
Q 001226 560 FSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSG 639 (1119)
Q Consensus 560 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 639 (1119)
+++|+++ .+|..+..+..|++|.+++|.+. ..+..+.++.++..+.+++|++. .+|..+..++.+++|++++|.++.
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~ 269 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISS 269 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccccc
Confidence 8888887 67777666667888888888654 56777788888888888888886 457777888888888888888883
Q ss_pred CCCccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCcccccccccccceeeccCceecccCCcccc
Q 001226 640 AIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQILDLSSNSFSGEIPTEVN 719 (1119)
Q Consensus 640 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 719 (1119)
++. ++.+.+++.|++++|.+...+|.............+ +.++ ..+........+...++..|... ..|..+.
T Consensus 270 -i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 342 (394)
T COG4886 270 -ISS-LGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLN---LLLT-LKALELKLNSILLNNNILSNGET-SSPEALS 342 (394)
T ss_pred -ccc-ccccCccCEEeccCccccccchhhhccchhHHhhhh---hhhh-ccccccccccccccccccccccc-ccchhhc
Confidence 444 888888888888888887666554333222211111 2222 22223333344445555555554 4455555
Q ss_pred ccccceEEeccccccc
Q 001226 720 NMVSLYFVNISFNHFS 735 (1119)
Q Consensus 720 ~~~~l~~l~ls~N~~~ 735 (1119)
....+..++...+...
T Consensus 343 ~~~~~~~~~~~~~~~~ 358 (394)
T COG4886 343 ILESLNNLWTLDNALD 358 (394)
T ss_pred ccccccCceecccccc
Confidence 5555555555444443
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.35 E-value=9.4e-13 Score=153.95 Aligned_cols=202 Identities=31% Similarity=0.356 Sum_probs=98.0
Q ss_pred CccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCcccccccc
Q 001226 475 ANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSN 554 (1119)
Q Consensus 475 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 554 (1119)
..+..+++|+.|++++|+++ .+|...+.++.|+.|++++|+++ .+|........
T Consensus 157 ~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-------------------------~l~~~~~~~~~ 210 (394)
T COG4886 157 SPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-------------------------DLPPEIELLSA 210 (394)
T ss_pred hhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-------------------------cCchhhhhhhh
Confidence 34455556666666666665 44444445555555555555555 33333334444
Q ss_pred ceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhhhcccCCeeEccC
Q 001226 555 LTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQE 634 (1119)
Q Consensus 555 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 634 (1119)
|++|++++|.+. ..+..+.++.++..|.+++|++. .++..++.+++++.|++++|+++. ++. ++.+..++.|++++
T Consensus 211 L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~ 286 (394)
T COG4886 211 LEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSG 286 (394)
T ss_pred hhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccccc-ccc-ccccCccCEEeccC
Confidence 555555555433 34555555555555555555554 335555555556666666666652 333 55555666666666
Q ss_pred ccCccCCCccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCcccccccccccceeeccCceec
Q 001226 635 NNLSGAIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQILDLSSNSFS 711 (1119)
Q Consensus 635 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 711 (1119)
|.+...+|...........+.- +.+. ......+........++..+... ..|..+.....+..++...+...
T Consensus 287 n~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 358 (394)
T COG4886 287 NSLSNALPLIALLLLLLELLLN--LLLT--LKALELKLNSILLNNNILSNGET-SSPEALSILESLNNLWTLDNALD 358 (394)
T ss_pred ccccccchhhhccchhHHhhhh--hhhh--ccccccccccccccccccccccc-ccchhhcccccccCceecccccc
Confidence 6665544443332222211111 1111 00011111111112333344444 45556666666666666666554
No 462
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.33 E-value=8.1e-14 Score=146.48 Aligned_cols=191 Identities=28% Similarity=0.312 Sum_probs=116.2
Q ss_pred hccCCcccEEEcCCCcccC----CCCcccccCCCccEEEcccc---cccccCCccc-------cccCccCEEEccCcccc
Q 001226 92 ICKNQHLLSLDLSGNEFTG----SIPKQLGNCGQLKTLLLNDN---RFQGSIPPEI-------FKLKRLSWLDLGYNSLS 157 (1119)
Q Consensus 92 ~~~l~~l~~L~Ls~n~~~~----~~~~~l~~l~~L~~L~L~~n---~i~~~~p~~l-------~~l~~L~~L~Ls~n~l~ 157 (1119)
+..+..++.|+||+|.|.- .+.+.+.+.++|+..++|+- +....+|+.+ ...++|++||||+|-+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 4456788888999998853 46667788889999998875 4444566543 34568999999999887
Q ss_pred CCCCccc----ccccccceeeecccccccccCcc-------------CCCcccccEEEeccccccccCCCCCccccceee
Q 001226 158 GKIPPQV----SLCYSLESIGFHNNFLNGELPND-------------ICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHL 220 (1119)
Q Consensus 158 ~~~p~~l----~~l~~L~~L~L~~n~l~~~~~~~-------------l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l 220 (1119)
...+..| .++..|++|.|.||.+....-.. .+.-++|+++...+|++.....
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga----------- 174 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGA----------- 174 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccH-----------
Confidence 6666554 45678888888888766433222 2234556666666666542221
Q ss_pred eeeccccccCccccccCCCCCcEEEccCCccCCc---cChhhhhcCCCccEEEcCCCccCCC----cchhhcCCCCCcee
Q 001226 221 LIHENDFVGSLPTSLSNCRNLVEFSASSNNFGGA---ISPWIFKGLLQLEVLYLDDNNLEGQ----IPETLWGLENLQKL 293 (1119)
Q Consensus 221 ~l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i~~~---~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L 293 (1119)
..+...+...+.|+++.++.|.|... .....|..+++|++|||.+|-++.. +.+++..+++|+.|
T Consensus 175 --------~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 175 --------TALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLREL 246 (382)
T ss_pred --------HHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheee
Confidence 12334455556666666666665421 2234455566666666666655432 22334445555555
Q ss_pred eecccccc
Q 001226 294 VLSANKLN 301 (1119)
Q Consensus 294 ~Ls~N~l~ 301 (1119)
++++|.+.
T Consensus 247 ~l~dcll~ 254 (382)
T KOG1909|consen 247 NLGDCLLE 254 (382)
T ss_pred cccccccc
Confidence 55555554
No 463
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.31 E-value=9.1e-12 Score=145.10 Aligned_cols=145 Identities=19% Similarity=0.199 Sum_probs=102.0
Q ss_pred HHHHhhCCceeeecCCccEEEEEeCCCceEEEEEeccccc----------------------------------------
Q 001226 832 DVIRATEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---------------------------------------- 871 (1119)
Q Consensus 832 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------------------------------------- 871 (1119)
++..+-..+.||+|++|.||+|+.++ |+.||||+.+...
T Consensus 115 ~~F~~fd~~plasaSigQVh~A~l~~-G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 193 (437)
T TIGR01982 115 ELFAEFEEKPLAAASIAQVHRARLVD-GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKT 193 (437)
T ss_pred HHHhhCCCcceeeeehhheEEEEecC-CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHH
Confidence 33333344789999999999999875 8999999874321
Q ss_pred ----ccHHHHHHHHhhcC----CCCEEEEeeeee-cCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHH-
Q 001226 872 ----TNFDVEIRTLSLVR----HRNILRIVGSCT-KDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQ- 941 (1119)
Q Consensus 872 ----~~~~~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~- 941 (1119)
-++.+|++.+.+++ |..-+.+-.++. .....++||||++|+++.++...... .. ...+++..++.
T Consensus 194 l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 194 LRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARS 268 (437)
T ss_pred HHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHH
Confidence 12444555555552 333334333332 24457999999999999887654221 12 23456666665
Q ss_pred HHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 942 GLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 942 ~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
.+..+|.. |++|+|++|.||+++.+++++++|||++.....
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 46788888 999999999999999999999999999987653
No 464
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=2.1e-12 Score=134.25 Aligned_cols=205 Identities=22% Similarity=0.286 Sum_probs=142.0
Q ss_pred HhhcCCCCEEEEeeeeecC-----CceEEEEeccCCCCHHHhhccCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 001226 881 LSLVRHRNILRIVGSCTKD-----EHGFIVTEYMPGGTLFNVLHQNEP-RLVLDWNTRYHIALGIAQGLSYLHYDCVPQI 954 (1119)
Q Consensus 881 l~~l~h~niv~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 954 (1119)
+-.+.|.|+|++..|+.+. ....++.|||..|++..++++... ...+..+...+|+.||..|+.|||+. .|.|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 3445699999999998754 346889999999999999987543 23577778889999999999999976 7899
Q ss_pred EecCCCCCCeEeCCCCceEEEeccccccc--cCCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCC
Q 001226 955 IHRDIKSDNILLDSELEPKIGDFGMSKLI--SDSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRK 1032 (1119)
Q Consensus 955 vH~Dlkp~Nill~~~~~vkl~DfGla~~~--~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~ 1032 (1119)
+|+++.-+-|++..+|-+|+.--.-.... .............+-++|.|||+-.....+.++|||+||+...||..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 99999999999999998887532211111 0111112223345678999999888888889999999999999999887
Q ss_pred CCCCCCCCCCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 001226 1033 MPVDPSFGEDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLI 1107 (1119)
Q Consensus 1033 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~ 1107 (1119)
.--.. .+....+... ....+- ... .+ .=...+.+|++..|..||+|++++.|.-
T Consensus 280 iq~tn--seS~~~~ee~---------ia~~i~---~le--n~-----lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 280 IQSTN--SESKVEVEEN---------IANVII---GLE--NG-----LQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred eccCC--Ccceeehhhh---------hhhhee---ecc--Cc-----cccCcCcccccCCCCCCcchhhhhcCce
Confidence 54211 1111111000 000000 000 00 0035677999999999999999887643
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.18 E-value=6e-12 Score=128.81 Aligned_cols=140 Identities=30% Similarity=0.420 Sum_probs=95.3
Q ss_pred CCCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCccccccCChhhh
Q 001226 543 GSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLAGSIPSEVI 622 (1119)
Q Consensus 543 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 622 (1119)
|..-.....|+.|++||||+|.|+ .+.+++.-++.++.|++|+|.+. .+. .+..+++|+.||||+|.++ .+-.+-.
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~ 349 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHL 349 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHh
Confidence 334445566778888888888887 67777777888888888888887 333 3777888888888888887 4666666
Q ss_pred hcccCCeeEccCccCccCCCccccccccccEeecCCcccCCCccccchhhccccceeeeccccccCCcccccccccccce
Q 001226 623 SLEKMQSLSLQENNLSGAIPDAFSSVQSLFELQLGSNIFDGSIPCSLSKLHHFSSILNVSNNKLSGKIPECLGNLDKLQI 702 (1119)
Q Consensus 623 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~L~ls~N~l~~~~p~~~~~l~~L~~ 702 (1119)
.|-+++.|.|++|.|.. -+.++++-+|..||+++|++.. + .--..+|+|+.|++
T Consensus 350 KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~--------l----------------deV~~IG~LPCLE~ 403 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEE--------L----------------DEVNHIGNLPCLET 403 (490)
T ss_pred hhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhh--------H----------------HHhcccccccHHHH
Confidence 77778888888887762 2445555555555555554430 0 01224566677777
Q ss_pred eeccCceecc
Q 001226 703 LDLSSNSFSG 712 (1119)
Q Consensus 703 L~Ls~N~l~g 712 (1119)
+.|-+|++.+
T Consensus 404 l~L~~NPl~~ 413 (490)
T KOG1259|consen 404 LRLTGNPLAG 413 (490)
T ss_pred HhhcCCCccc
Confidence 7777777663
No 466
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.17 E-value=9.2e-11 Score=119.64 Aligned_cols=127 Identities=21% Similarity=0.230 Sum_probs=95.8
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc---ccHHHHHHHHhhcCCCCEE-EEeeeeecCCceEEEEeccCCCCHH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---TNFDVEIRTLSLVRHRNIL-RIVGSCTKDEHGFIVTEYMPGGTLF 915 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lV~e~~~~gsL~ 915 (1119)
+.++.|.++.||++... ++.|++|+..... ..+.+|+..++.+.+.+++ +++++. ....++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 56899999999998865 6789999985543 4578899999998655544 444443 23458999999998775
Q ss_pred HhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEecCCCCCCeEeCCCCceEEEecccccc
Q 001226 916 NVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDC--VPQIIHRDIKSDNILLDSELEPKIGDFGMSKL 982 (1119)
Q Consensus 916 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~ 982 (1119)
+. . . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~----~----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TE----D----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc----c----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 43 0 0 11245678999999999882 12369999999999999 67899999998763
No 467
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.17 E-value=8.9e-11 Score=137.93 Aligned_cols=136 Identities=16% Similarity=0.136 Sum_probs=92.8
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEeccccc--------------------------------------------ccHH
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE--------------------------------------------TNFD 875 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------------------------------------------~~~~ 875 (1119)
+.+|+|++|.||+|+.+++|+.||||+.+... -++.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 78999999999999999889999999885321 1234
Q ss_pred HHHHHHhhcC----CCCEEEEeeeeec-CCceEEEEeccCCCCHHHhh--ccCCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 001226 876 VEIRTLSLVR----HRNILRIVGSCTK-DEHGFIVTEYMPGGTLFNVL--HQNEP-RLVLDWNTRYHIALGIAQGLSYLH 947 (1119)
Q Consensus 876 ~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l--~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH 947 (1119)
+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++- ...+. ...+....+..++ ..+.
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~-------~Qif 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF-------TQVF 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH-------HHHH
Confidence 4555444442 4444444444433 45678999999999998752 22221 0012222222223 3334
Q ss_pred hCCCCCeEecCCCCCCeEeCCCC----ceEEEeccccccccC
Q 001226 948 YDCVPQIIHRDIKSDNILLDSEL----EPKIGDFGMSKLISD 985 (1119)
Q Consensus 948 ~~~~~~ivH~Dlkp~Nill~~~~----~vkl~DfGla~~~~~ 985 (1119)
.. |++|+|++|.||+++.++ +++++|||++...+.
T Consensus 278 ~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 45 999999999999999988 999999999987654
No 468
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=5.6e-11 Score=135.53 Aligned_cols=245 Identities=23% Similarity=0.247 Sum_probs=177.2
Q ss_pred hhCCceeee--cCCccEEEEEe--CCCceEEEEEecccc------cccHHHHHHHHhhcC-CCCEEEEeeeeecCCceEE
Q 001226 836 ATEGRIIGK--GKHGTVYRTLS--NNSRKHWAVKKLNRS------ETNFDVEIRTLSLVR-HRNILRIVGSCTKDEHGFI 904 (1119)
Q Consensus 836 ~~~~~~lG~--G~fg~Vy~~~~--~~~~~~vavK~~~~~------~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 904 (1119)
+...+.+|+ |.+|.||.+.. ..++..+|+|+-+.. ...-.+|+...+.++ |++.++....+..++..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 334477899 99999999988 778899999975321 122345666666664 9999999999999999999
Q ss_pred EEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEecCCCCCCeEeCCC-CceEEEeccc
Q 001226 905 VTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQ----GLSYLHYDCVPQIIHRDIKSDNILLDSE-LEPKIGDFGM 979 (1119)
Q Consensus 905 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~vkl~DfGl 979 (1119)
-+|++ +.++.++.+.... .++....+....+..+ |+.++|+. +++|-|+||.||+..++ ...+.+|||+
T Consensus 196 qtE~~-~~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 196 QTELC-GESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeccc-cchhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcce
Confidence 99998 5788888776543 3666777778888888 99999999 99999999999999999 7889999999
Q ss_pred cccccCCCCCCcc---cccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhccc
Q 001226 980 SKLISDSHSSSTR---SAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQEN 1056 (1119)
Q Consensus 980 a~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1056 (1119)
...+.+....... ....+...|++||. ..+.++.++|+|++|.+..+..++..+..... ...|......
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~-~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~-----~~~W~~~r~~-- 341 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKEL-LNGLATFASDIFSLGEVILEAILGSHLPSVGK-----NSSWSQLRQG-- 341 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhh-hccccchHhhhcchhhhhHhhHhhcccccCCC-----CCCccccccc--
Confidence 9988765432221 12256778999994 45677899999999999999998876653221 1111111100
Q ss_pred ccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 001226 1057 HECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGF 1105 (1119)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~ 1105 (1119)
..-.++.+ ....++...+..|++.+|-.|++.+.+..+
T Consensus 342 ~ip~e~~~-----------~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 342 YIPLEFCE-----------GGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred cCchhhhc-----------CcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 00000110 112234457889999999999999887653
No 469
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.13 E-value=2.4e-12 Score=135.55 Aligned_cols=248 Identities=23% Similarity=0.273 Sum_probs=135.0
Q ss_pred cccccCCCccEEEccccccccc----CCccccccCccCEEEccCc---cccCCCCccc-------ccccccceeeecccc
Q 001226 114 KQLGNCGQLKTLLLNDNRFQGS----IPPEIFKLKRLSWLDLGYN---SLSGKIPPQV-------SLCYSLESIGFHNNF 179 (1119)
Q Consensus 114 ~~l~~l~~L~~L~L~~n~i~~~----~p~~l~~l~~L~~L~Ls~n---~l~~~~p~~l-------~~l~~L~~L~L~~n~ 179 (1119)
+.+..+..+++|+||+|.|... +.+.+.+.++|+..++|+- ++...+|..+ ..+++|++|+||.|.
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 3466788899999999988653 4455667788999998863 3334555544 334466666666666
Q ss_pred cccccCccCC----CcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCCCCCcEEEccCCccCCcc
Q 001226 180 LNGELPNDIC----SLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNCRNLVEFSASSNNFGGAI 255 (1119)
Q Consensus 180 l~~~~~~~l~----~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i~~~~ 255 (1119)
+....+..|. ++..|++|+|.+|.+.-.... .+..++ .+|. .
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~-------------------~l~~al------~~l~--~------- 149 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGG-------------------RLGRAL------FELA--V------- 149 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHH-------------------HHHHHH------HHHH--H-------
Confidence 6544444332 345566666665544311000 000000 0000 0
Q ss_pred ChhhhhcCCCccEEEcCCCccCCCc----chhhcCCCCCceeeecccccccc----CcccccCCCCCcEEEccccccccc
Q 001226 256 SPWIFKGLLQLEVLYLDDNNLEGQI----PETLWGLENLQKLVLSANKLNGT----ISGQISHCNQLQVIALSRNNLVGQ 327 (1119)
Q Consensus 256 ~~~~~~~l~~L~~L~L~~n~l~~~~----p~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~ 327 (1119)
......-++|+++....|++..-. ...|...+.|+.+.+++|.|... ....|.++++|++|||.+|-++..
T Consensus 150 -~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~e 228 (382)
T KOG1909|consen 150 -NKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLE 228 (382)
T ss_pred -HhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhH
Confidence 000112345666666666665332 23344556777777777766521 234566777777777777776632
Q ss_pred ----cCcccCCCCCCCeEEccCCcccCCCCCCC-----CCCCCCcEEEcccCcCccc----CchhhhcccccceeeccCc
Q 001226 328 ----IPRSVGNLSSLNSLLLFNNRLQGTLPPEL-----GNCGSLVDLRLQHNFIGGT----IPPEICNLAKLEVLYLFNN 394 (1119)
Q Consensus 328 ----~~~~~~~l~~L~~L~L~~N~l~~~~~~~l-----~~l~~L~~L~L~~N~i~~~----~~~~l~~l~~L~~L~L~~N 394 (1119)
+...+..+++|+.|++++|.++.....+| ...++|+.|.+.+|.|+.. +...+...+.|+.|+|++|
T Consensus 229 gs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN 308 (382)
T KOG1909|consen 229 GSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGN 308 (382)
T ss_pred HHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcc
Confidence 23345556667777777776664332222 1245666666666666521 1122334455556666666
Q ss_pred cc
Q 001226 395 RI 396 (1119)
Q Consensus 395 ~l 396 (1119)
++
T Consensus 309 ~l 310 (382)
T KOG1909|consen 309 RL 310 (382)
T ss_pred cc
Confidence 55
No 470
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.10 E-value=1.1e-09 Score=125.97 Aligned_cols=167 Identities=20% Similarity=0.260 Sum_probs=127.9
Q ss_pred EEEeCCCceEEEEEeccccc----ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEeccCCCCHHHhhccCCCCCCC
Q 001226 852 RTLSNNSRKHWAVKKLNRSE----TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPRLVL 927 (1119)
Q Consensus 852 ~~~~~~~~~~vavK~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l 927 (1119)
.|..+.++.+|.|++++... +...+-++.++.+|||+|+++++.++.++..|+|+|.+. .|..++++..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----- 102 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----- 102 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-----
Confidence 45667778889998886433 335677888999999999999999999999999999984 5677776543
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCCCCCCcccccccCCCccccccc
Q 001226 928 DWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDSHSSSTRSAIVGSLGYIAPENA 1007 (1119)
Q Consensus 928 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 1007 (1119)
.......+.||+.||.+||..| +++|++|.-..|+|++.|+.|+++|.++........ ......--..|..|+.+
T Consensus 103 -~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 103 -KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEI 177 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhc
Confidence 4566778899999999999776 899999999999999999999999998865533221 11111222346666644
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhCC
Q 001226 1008 YSTRLTEKSDVYSYGVILFELLFRK 1032 (1119)
Q Consensus 1008 ~~~~~~~~sDvwslG~vl~elltg~ 1032 (1119)
.... -..|.|.||+++||++.|.
T Consensus 178 ~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 178 DPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred Cccc--cchhhhhHHHHHHHHhCcc
Confidence 3322 4569999999999999983
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=1.8e-11 Score=132.43 Aligned_cols=211 Identities=23% Similarity=0.169 Sum_probs=111.9
Q ss_pred cccccceeeecccccccccC-ccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCCCCCcEE
Q 001226 166 LCYSLESIGFHNNFLNGELP-NDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNCRNLVEF 244 (1119)
Q Consensus 166 ~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l~~L~~L 244 (1119)
++.+|+...|.++.+..... .....+++++.|||++|-+...- .+..-...+++|+.|
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~---------------------~v~~i~eqLp~Le~L 177 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWF---------------------PVLKIAEQLPSLENL 177 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHH---------------------HHHHHHHhcccchhc
Confidence 34445555555544442221 24445666666666666544211 112223445566666
Q ss_pred EccCCccCCccChhhhhcCCCccEEEcCCCccCCCcc-hhhcCCCCCceeeeccccccccCcccccCCCCCcEEEccccc
Q 001226 245 SASSNNFGGAISPWIFKGLLQLEVLYLDDNNLEGQIP-ETLWGLENLQKLVLSANKLNGTISGQISHCNQLQVIALSRNN 323 (1119)
Q Consensus 245 ~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 323 (1119)
+++.|++.-......-..+.+|+.|.|+.|+++.... .....+|+|+.|+|..|..-.+......-+..|++|||++|+
T Consensus 178 Nls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~ 257 (505)
T KOG3207|consen 178 NLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNN 257 (505)
T ss_pred ccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCc
Confidence 6666665543333333345667777777777763322 223466777777777775333334444556677777777777
Q ss_pred ccccc-CcccCCCCCCCeEEccCCcccCCC-CCC-----CCCCCCCcEEEcccCcCccc-CchhhhcccccceeeccCcc
Q 001226 324 LVGQI-PRSVGNLSSLNSLLLFNNRLQGTL-PPE-----LGNCGSLVDLRLQHNFIGGT-IPPEICNLAKLEVLYLFNNR 395 (1119)
Q Consensus 324 l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~-~~~-----l~~l~~L~~L~L~~N~i~~~-~~~~l~~l~~L~~L~L~~N~ 395 (1119)
+.... -...+.++.|+.|+++.+.++..- |+. ...+++|++|++.+|+|..- .-..+..+++|+.|.+..|.
T Consensus 258 li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ 337 (505)
T KOG3207|consen 258 LIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNY 337 (505)
T ss_pred ccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccc
Confidence 65321 134566777777777777766332 222 23456666666666666411 11223334455555555555
Q ss_pred cc
Q 001226 396 IE 397 (1119)
Q Consensus 396 l~ 397 (1119)
+.
T Consensus 338 ln 339 (505)
T KOG3207|consen 338 LN 339 (505)
T ss_pred cc
Confidence 54
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=2.4e-11 Score=131.39 Aligned_cols=163 Identities=25% Similarity=0.204 Sum_probs=96.3
Q ss_pred cCCCCCCCeEEccCCcccCCCC-CCCCCCCCCcEEEcccCcCcccCc--hhhhcccccceeeccCccccCCCCccccccC
Q 001226 332 VGNLSSLNSLLLFNNRLQGTLP-PELGNCGSLVDLRLQHNFIGGTIP--PEICNLAKLEVLYLFNNRIEGAIPHQIGRMS 408 (1119)
Q Consensus 332 ~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~i~~~~~--~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 408 (1119)
-.++.+|+...|.++.+..... .....|++++.|||++|-+....+ .-...+++|+.|+|+.|++......
T Consensus 117 Qsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s------ 190 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISS------ 190 (505)
T ss_pred hhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccc------
Confidence 3566778888888777762211 245567777777777776653211 2233456666666666665421111
Q ss_pred cceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceeeCccCCccccccccceeec
Q 001226 409 KLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVL 488 (1119)
Q Consensus 409 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L 488 (1119)
.. -..++.|+.|.|+.|.|+...-......+|.|+.|+|.+|..-..-......+..|+.|||
T Consensus 191 ----------~~-------~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdL 253 (505)
T KOG3207|consen 191 ----------NT-------TLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDL 253 (505)
T ss_pred ----------cc-------hhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccc
Confidence 01 1145677888888888875555556667888888888888532222333344556677777
Q ss_pred cCccccCCCC--ccccccccccEEEeccCccc
Q 001226 489 GNNRFNGSFP--IEIGKCSSLRRVILSNNLLQ 518 (1119)
Q Consensus 489 ~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~ 518 (1119)
++|++- .++ ...+.++.|+.|+++.|.+.
T Consensus 254 s~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 254 SNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred cCCccc-ccccccccccccchhhhhccccCcc
Confidence 777765 233 23556666666666666554
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.09 E-value=2.8e-11 Score=123.99 Aligned_cols=130 Identities=22% Similarity=0.260 Sum_probs=73.9
Q ss_pred CCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEE
Q 001226 335 LSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELA 414 (1119)
Q Consensus 335 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 414 (1119)
...|+.+||++|.|+ .+.++..-+|+++.|++++|.|... ..+..+++|+.|||++|.++ ....+-..+.+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 345666666666666 4455555566666666666666522 33666666666666666665 3333444556666666
Q ss_pred eecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceee
Q 001226 415 LYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFY 470 (1119)
Q Consensus 415 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1119)
|+.|.|.. -..+.++-+|..||+++|+|.......-...+|.|+.+.|.+|++.
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 66666642 2345556666666666666653222222334555555555555554
No 474
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.07 E-value=6.8e-10 Score=113.19 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=96.7
Q ss_pred ceeeecCCccEEEEEeCC------CceEEEEEecccc-------------c-------------cc----HHHHHHHHhh
Q 001226 840 RIIGKGKHGTVYRTLSNN------SRKHWAVKKLNRS-------------E-------------TN----FDVEIRTLSL 883 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~------~~~~vavK~~~~~-------------~-------------~~----~~~E~~~l~~ 883 (1119)
-.||.|.-+.||.|...+ .+..+|||+++.. . .. .++|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998654 3578999987311 0 01 2378888888
Q ss_pred cCC--CCEEEEeeeeecCCceEEEEeccCCCCHHH-hhccCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEecCC
Q 001226 884 VRH--RNILRIVGSCTKDEHGFIVTEYMPGGTLFN-VLHQNEPRLVLDWNTRYHIALGIAQGLSYL-HYDCVPQIIHRDI 959 (1119)
Q Consensus 884 l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dl 959 (1119)
+.. -++.+.+++ ...++||||+.+..+.. .+++. .++.++...+..+++.++..+ |.. ++||+|+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 853 456666654 45689999997653321 22221 244456677889999999999 777 9999999
Q ss_pred CCCCeEeCCCCceEEEecccccccc
Q 001226 960 KSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 960 kp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
++.||+++ ++.+.++|||.+....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999887553
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=2.3e-10 Score=114.18 Aligned_cols=126 Identities=29% Similarity=0.310 Sum_probs=34.1
Q ss_pred CCCCCCeEEccCCcccCCCCCCCC-CCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceE
Q 001226 334 NLSSLNSLLLFNNRLQGTLPPELG-NCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVE 412 (1119)
Q Consensus 334 ~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 412 (1119)
+..++++|+|.+|.|+. + +.++ .+.+|+.|++++|.|+.. +.+..++.|+.|++++|+|+...+.....+++|++
T Consensus 17 n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred ccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 33445555555555552 2 2333 345555555555555532 23455555555555555555332211124555666
Q ss_pred EEeecccccccC-CccccCCCCcCEEEccCccCcccch--hhhhccCCccceec
Q 001226 413 LALYNNRLTGRI-PPDITRLRNLQFLSLAHNHLTGEVA--LELGKHFPYLSRLD 463 (1119)
Q Consensus 413 L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~~l~~L~~L~ 463 (1119)
|++++|+|.... -..+..+++|+.|+|.+|+++.... ..+...+|+|+.||
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 666666554311 1344556666666666666653221 12334566666665
No 476
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.02 E-value=4.7e-11 Score=139.69 Aligned_cols=245 Identities=27% Similarity=0.268 Sum_probs=120.9
Q ss_pred CCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEEee
Q 001226 337 SLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALY 416 (1119)
Q Consensus 337 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 416 (1119)
.++.+.+..|.+.. .-..+..+++|+.|++.+|+|..+ ...+..+++|++|++++|+|+.+.+ +..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhheec
Confidence 33334444444441 222344445555555555555422 1114455555555555555554322 4444556666666
Q ss_pred cccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceeeCccCCccccccccceeeccCccccCC
Q 001226 417 NNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGS 496 (1119)
Q Consensus 417 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~ 496 (1119)
+|.|+. ...+..+.+|+.+++++|+++...+.. ...+.+++.+++.+|.+.. ...+..+..+..+++..|.++..
T Consensus 149 ~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~ 223 (414)
T KOG0531|consen 149 GNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKL 223 (414)
T ss_pred cCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccceec
Confidence 666552 223444666666666666665322211 2345556666666665542 22233334444445555555422
Q ss_pred CCccccccc--cccEEEeccCccccCCCccccCCCCcceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccC
Q 001226 497 FPIEIGKCS--SLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELG 574 (1119)
Q Consensus 497 ~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 574 (1119)
-+ +..+. .|+.+++++|++.. .+..+..+.++..|++++|++... ..+.
T Consensus 224 ~~--l~~~~~~~L~~l~l~~n~i~~-------------------------~~~~~~~~~~l~~l~~~~n~~~~~--~~~~ 274 (414)
T KOG0531|consen 224 EG--LNELVMLHLRELYLSGNRISR-------------------------SPEGLENLKNLPVLDLSSNRISNL--EGLE 274 (414)
T ss_pred cC--cccchhHHHHHHhcccCcccc-------------------------ccccccccccccccchhhcccccc--cccc
Confidence 11 11111 25555555555542 223344555666666666666532 2234
Q ss_pred CcccccEEEcccCcccCc---CCc-ccccCCCCcEEeccCccccccCCh
Q 001226 575 NLENLQILRLSANKLDGR---IPY-ELGKCTKMIKLDLSDNYLAGSIPS 619 (1119)
Q Consensus 575 ~l~~L~~L~Ls~N~l~~~---~p~-~~~~l~~L~~L~Ls~N~l~~~~p~ 619 (1119)
....+..+.+..|++... ... .......++.+.+..|.+....+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 275 RLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred ccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccccc
Confidence 445666666666666521 111 145567777777777777654443
No 477
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.01 E-value=4.8e-11 Score=139.62 Aligned_cols=218 Identities=29% Similarity=0.344 Sum_probs=110.1
Q ss_pred cccccceeeccCccccCCCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccce
Q 001226 382 NLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSR 461 (1119)
Q Consensus 382 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 461 (1119)
.+..++.+++..|.|.. +-..+..+.+|..|++.+|+|. .+...+..+++|++|++++|+|+...+.. .++.|+.
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~l~---~l~~L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEGLS---TLTLLKE 144 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccchh---hccchhh
Confidence 34445555555555553 2233455556666666666665 23323555666666666666665433222 2344666
Q ss_pred eccccceeeCccCCccccccccceeeccCccccCCCC-ccccccccccEEEeccCccccCCCccccCCCCcceeeccCcc
Q 001226 462 LDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFP-IEIGKCSSLRRVILSNNLLQGSLPATLERNPGVSFLDVRGNL 540 (1119)
Q Consensus 462 L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 540 (1119)
|++++|.|+.. ..+..+++|+.+++++|++...-+ . ...+.+++.+++.+|.+.. ...+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhccccc
Confidence 66666665422 233335666677777777663322 1 3556677777777777652 2233333444444555555
Q ss_pred cCCCCCccccccc--cceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCcccc
Q 001226 541 LQGSIPPVFGFWS--NLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNYLA 614 (1119)
Q Consensus 541 l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 614 (1119)
++..-+ +..+. .|+.+++++|++. .++..+..+.++..|++.+|++... ..+.....+..+.++.|.+.
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 542211 11111 2555666666655 3334455555555555555555421 12233444555555555543
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.98 E-value=3e-10 Score=113.41 Aligned_cols=80 Identities=26% Similarity=0.409 Sum_probs=13.5
Q ss_pred CccEEEcccccccccCCcccc-ccCccCEEEccCccccCCCCcccccccccceeeecccccccccCccC-CCcccccEEE
Q 001226 121 QLKTLLLNDNRFQGSIPPEIF-KLKRLSWLDLGYNSLSGKIPPQVSLCYSLESIGFHNNFLNGELPNDI-CSLPKLKSLY 198 (1119)
Q Consensus 121 ~L~~L~L~~n~i~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~ 198 (1119)
++++|+|++|+|+. + +.++ .+.+|+.|||++|.|+.. +.+..++.|++|++++|.|+...+ .+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~-~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISE-GLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CH-HHHHH-TT--EEE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcccc-chHHhCCcCCEEE
Confidence 44444444444442 1 2233 244444444444444422 123333333444444443332211 11 1244444444
Q ss_pred ecccccc
Q 001226 199 LNTNNLT 205 (1119)
Q Consensus 199 L~~n~l~ 205 (1119)
+++|+|.
T Consensus 95 L~~N~I~ 101 (175)
T PF14580_consen 95 LSNNKIS 101 (175)
T ss_dssp -TTS---
T ss_pred CcCCcCC
Confidence 4444443
No 479
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.96 E-value=5.6e-10 Score=138.81 Aligned_cols=107 Identities=21% Similarity=0.229 Sum_probs=80.5
Q ss_pred CcccEEEcCCCc--ccCCCCcccccCCCccEEEcccccccccCCccccccCccCEEEccCccccCCCCccccccccccee
Q 001226 96 QHLLSLDLSGNE--FTGSIPKQLGNCGQLKTLLLNDNRFQGSIPPEIFKLKRLSWLDLGYNSLSGKIPPQVSLCYSLESI 173 (1119)
Q Consensus 96 ~~l~~L~Ls~n~--~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 173 (1119)
+.|++|-+.+|. +.-..+..|..++.|++|||++|.=-+.+|+.+++|-+|++|+|+++.++ .+|..+++++.|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 467777777775 44233334677888888888887655678888888888888888888887 788888888888888
Q ss_pred eecccccccccCccCCCcccccEEEecccc
Q 001226 174 GFHNNFLNGELPNDICSLPKLKSLYLNTNN 203 (1119)
Q Consensus 174 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 203 (1119)
++..+.-...+|..+..|++|++|.+..-.
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccc
Confidence 888776555557777778888888876654
No 480
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.92 E-value=3.1e-08 Score=107.17 Aligned_cols=267 Identities=14% Similarity=0.124 Sum_probs=161.4
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccccccc-HHHHHHHHhhc-CCCCEEEEeeee-------ecCCceEEEEe
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSETN-FDVEIRTLSLV-RHRNILRIVGSC-------TKDEHGFIVTE 907 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-~~~E~~~l~~l-~h~niv~l~~~~-------~~~~~~~lV~e 907 (1119)
+.++.+|+|+.+.+|-.-.- +..+-|++....-. -...+.+|... .||-+-.-+.|= ..+....++|+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCCccccCCccceeeecchh---hchhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 34688999999999954322 22345766443221 11222233332 455443322221 12233567888
Q ss_pred ccCCCC-HHHhhcc---CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 908 YMPGGT-LFNVLHQ---NEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 908 ~~~~gs-L~~~l~~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
.+++.- ..++... ++......|....++++.++.+.+.||.. |.+-+|+.++|+|+++++.|.+.|-..-...
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceeec
Confidence 887652 2222221 22223578999999999999999999999 9999999999999999999999986644333
Q ss_pred cCCCCCCcccccccCCCcccccc-----cCCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCCCCCceeehhhhhhcccc
Q 001226 984 SDSHSSSTRSAIVGSLGYIAPEN-----AYSTRLTEKSDVYSYGVILFELLFR-KMPVDPSFGEDTDIVTWTRWKLQENH 1057 (1119)
Q Consensus 984 ~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~~~~sDvwslG~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1119)
.. .......+|..+|.+||. +.+...+...|.|.+|+++++++.| ++||.+.......--....... ..
T Consensus 168 ~n---g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia--~g 242 (637)
T COG4248 168 AN---GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA--HG 242 (637)
T ss_pred cC---CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh--cc
Confidence 22 222334578899999994 3345567889999999999999976 9999765321110000000000 00
Q ss_pred cccccccccc--cCCC--chHHHHHHHHHHHHHHccccC--CCCCCCHHHHHHHHHcccccCC
Q 001226 1058 ECICFLDREI--SFWD--SDDQLKALRLLELALECTRQV--ADMRPSMREVVGFLIKLNDKNE 1114 (1119)
Q Consensus 1058 ~~~~~~~~~~--~~~~--~~~~~~~~~l~~l~~~cl~~d--P~~RPs~~ell~~L~~~~~~~~ 1114 (1119)
.+...-++.. ..-. ..-...+.++..+..+|+... +.-|||++..+..|..+.++-.
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 0000011000 0000 011233456777888888654 5679999999999988877643
No 481
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.90 E-value=7.5e-10 Score=126.45 Aligned_cols=244 Identities=19% Similarity=0.186 Sum_probs=170.3
Q ss_pred HhhCCceeeecCCccEEEEEeC-CCceEEEEEecccccccHH------HHHHHHhhc-CCCCEEEEeeeeecCCceEEEE
Q 001226 835 RATEGRIIGKGKHGTVYRTLSN-NSRKHWAVKKLNRSETNFD------VEIRTLSLV-RHRNILRIVGSCTKDEHGFIVT 906 (1119)
Q Consensus 835 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~~~~~------~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 906 (1119)
++.....||.|.|+.||+...+ .++..|++|........+. .|+.+...+ .|.++++....+..-+..|+--
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 3445578999999999987755 5677889997754433332 344444444 4889999888888778888999
Q ss_pred eccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC-CceEEEeccccccccC
Q 001226 907 EYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE-LEPKIGDFGMSKLISD 985 (1119)
Q Consensus 907 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~vkl~DfGla~~~~~ 985 (1119)
||+++++......- ...+++...+++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.+....-
T Consensus 346 e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 346 EFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred hhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccccce
Confidence 99999988766522 23477778889999999999999988 99999999999999987 6779999998864321
Q ss_pred CCCCCcccccccCCCcc--cccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCceeehhhhhhcccccccccc
Q 001226 986 SHSSSTRSAIVGSLGYI--APENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFGEDTDIVTWTRWKLQENHECICFL 1063 (1119)
Q Consensus 986 ~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1119)
. ........+++ +|+......+..+.|++|+|.-+.|..++..--.. ..... .+.
T Consensus 420 ~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~----~~~~~--------------~i~ 476 (524)
T KOG0601|consen 420 S-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES----GVQSL--------------TIR 476 (524)
T ss_pred e-----cccccccccccccchhhccccccccccccccccccccccccCcccCcc----cccce--------------eee
Confidence 1 11122333444 55555667788999999999999999988743211 11100 001
Q ss_pred cccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 001226 1064 DREISFWDSDDQLKALRLLELALECTRQVADMRPSMREVVGFLIKLND 1111 (1119)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ell~~L~~~~~ 1111 (1119)
....... .........+...+...++..||.+.++..+.+..++
T Consensus 477 ~~~~p~~----~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 477 SGDTPNL----PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred cccccCC----CchHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 1111111 1111455677888999999999999999887765544
No 482
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.89 E-value=1.3e-08 Score=108.89 Aligned_cols=138 Identities=20% Similarity=0.293 Sum_probs=105.9
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEecccc-----cccHHHHHHHHhhcCCC--CEEEEeeeeecC---CceEEEEecc
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKLNRS-----ETNFDVEIRTLSLVRHR--NILRIVGSCTKD---EHGFIVTEYM 909 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lV~e~~ 909 (1119)
+.++.|.++.||++...+ |+.+++|+.... ...+..|+.+++.+++. .+.+++.+.... +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999998754 678999988643 35688999999999753 456677776653 3668999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDC--------------------------------------- 950 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 950 (1119)
+|.++.+.+.. ..++..+...++.++++++.+||+..
T Consensus 83 ~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 83 DGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99888765532 12566677777888888888887421
Q ss_pred --------------CCCeEecCCCCCCeEeCC--CCceEEEecccccc
Q 001226 951 --------------VPQIIHRDIKSDNILLDS--ELEPKIGDFGMSKL 982 (1119)
Q Consensus 951 --------------~~~ivH~Dlkp~Nill~~--~~~vkl~DfGla~~ 982 (1119)
...++|+|+.|.||+++. ++.+.++||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 56689999998763
No 483
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.87 E-value=8e-10 Score=132.00 Aligned_cols=242 Identities=21% Similarity=0.251 Sum_probs=170.1
Q ss_pred hCCceeeecCCccEEEEEeCCCceEEEEEeccccc-------ccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEecc
Q 001226 837 TEGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE-------TNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTEYM 909 (1119)
Q Consensus 837 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 909 (1119)
...+.+-+|.++.++.+.-..++...++|+..... .....+-.+.-..++|-+++....+......++|++|.
T Consensus 807 ~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~ 886 (1205)
T KOG0606|consen 807 EITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYL 886 (1205)
T ss_pred eecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHh
Confidence 33457889999999998877777666666553221 11112222222234677777766666778889999999
Q ss_pred CCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccCC---
Q 001226 910 PGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISDS--- 986 (1119)
Q Consensus 910 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~~--- 986 (1119)
.++++...++..+. .+.+.+......+.++.+|||+. .+.|||++|.|.+...++..+++|||.....+..
T Consensus 887 ~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 887 NGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred ccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 99999999987663 44445556677788999999988 7999999999999999999999999844322110
Q ss_pred ------------------CC--------CCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 001226 987 ------------------HS--------SSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMPVDPSFG 1040 (1119)
Q Consensus 987 ------------------~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~ 1040 (1119)
.. ........+|+.|.|||...+.....++|.|+.|++++|.++|..||.....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence 00 0112235799999999999999999999999999999999999999975432
Q ss_pred CCCceeehhhhhhcccccccccccccccCCCchHHHHHHHHHHHHHHccccCCCCCCCHH
Q 001226 1041 EDTDIVTWTRWKLQENHECICFLDREISFWDSDDQLKALRLLELALECTRQVADMRPSMR 1100 (1119)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 1100 (1119)
.... ..+..+.+ .|...+...+....+++...+..+|.+|-.|.
T Consensus 1041 q~~f---------------~ni~~~~~-~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1041 QQIF---------------ENILNRDI-PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhh---------------hccccCCC-CCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 2110 11111111 22333344455667888888889999988776
No 484
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.87 E-value=1.2e-08 Score=99.83 Aligned_cols=128 Identities=23% Similarity=0.300 Sum_probs=95.5
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEec-ccc-----------cccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKL-NRS-----------ETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~-~~~-----------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
..+++|+-+.+|.+.+. |.++++|.= ++. .....+|++++.+++--.|..-.-+..+.....++||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999998764 445667643 111 1235679999998875555444444456667789999
Q ss_pred ccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEeccccccc
Q 001226 908 YMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLI 983 (1119)
Q Consensus 908 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~ 983 (1119)
|++|-.|.+++.... ..++..+-.-+.-||.. ||||+|+.++||++..++ +.++|||++...
T Consensus 80 ~I~G~~lkd~l~~~~----------~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEAR----------PDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhcc----------hHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 999999998988652 23555666667789999 999999999999998776 999999998743
No 485
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.73 E-value=6.3e-08 Score=93.96 Aligned_cols=137 Identities=25% Similarity=0.285 Sum_probs=99.1
Q ss_pred ceeeecCCccEEEEEeCCCceEEEEEec-cc-----------ccccHHHHHHHHhhcCCCCEEEEeeeeecCCceEEEEe
Q 001226 840 RIIGKGKHGTVYRTLSNNSRKHWAVKKL-NR-----------SETNFDVEIRTLSLVRHRNILRIVGSCTKDEHGFIVTE 907 (1119)
Q Consensus 840 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~-~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 907 (1119)
..+-+|+-+.|+++.+. |+.++||.- .+ ......+|++.+.+++--.|.--.-++.+.....++||
T Consensus 13 ~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred eeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 56889999999998776 577777742 11 12345679999988875444433334555566679999
Q ss_pred ccCC-CCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCC---ceEEEecccccc
Q 001226 908 YMPG-GTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSEL---EPKIGDFGMSKL 982 (1119)
Q Consensus 908 ~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~vkl~DfGla~~ 982 (1119)
|++| .++.+++...-.....+ +.....+..|-+.+.-||.. +++|+|+..+||++..++ .+.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9977 47888877654322222 22367888888999999999 999999999999997665 358999999863
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.70 E-value=2.1e-08 Score=124.92 Aligned_cols=296 Identities=23% Similarity=0.217 Sum_probs=167.0
Q ss_pred CCCCceeeeccccccccCcccccCCCCCcEEEccccc--cccccCcccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcE
Q 001226 287 LENLQKLVLSANKLNGTISGQISHCNQLQVIALSRNN--LVGQIPRSVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVD 364 (1119)
Q Consensus 287 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~--l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 364 (1119)
....+...+-+|.+..+. .. ..+++|++|-+..|. +....+..|..++.|+.|||++|.=-+.+|..++++-+|++
T Consensus 522 ~~~~rr~s~~~~~~~~~~-~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIEHIA-GS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchhhcc-CC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 356677777777765322 21 223468888887775 44344445777888888888877655578888888888888
Q ss_pred EEcccCcCcccCchhhhcccccceeeccCccccCCCCccccccCcceEEEeecccc--cccCCccccCCCCcCEEEccCc
Q 001226 365 LRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPHQIGRMSKLVELALYNNRL--TGRIPPDITRLRNLQFLSLAHN 442 (1119)
Q Consensus 365 L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l--~~~~~~~~~~l~~L~~L~L~~N 442 (1119)
|++++..|. .+|..+.++++|.+|++..+.-...+|.....+++|++|.+..-.. +...-..+..+.+|+.+.....
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 888888887 7788888888888888887765545566667788888887765542 2222233445555555554332
Q ss_pred cCcccchhhhhccCCccceeccccceeeCccCCccccccccceeeccCccccCCCCccccccccccEEEeccCccccCCC
Q 001226 443 HLTGEVALELGKHFPYLSRLDLTGNSFYGPIPANICVGTNLFVLVLGNNRFNGSFPIEIGKCSSLRRVILSNNLLQGSLP 522 (1119)
Q Consensus 443 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 522 (1119)
.. .+...+ ..++.|.. ..+.+.+..+... ..+..++.+.+|+.|.+.++.+.....
T Consensus 679 s~--~~~e~l-~~~~~L~~--------------------~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~ 734 (889)
T KOG4658|consen 679 SV--LLLEDL-LGMTRLRS--------------------LLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVI 734 (889)
T ss_pred hh--HhHhhh-hhhHHHHH--------------------HhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhc
Confidence 21 000111 11111111 1111111122222 334456667777777777777654333
Q ss_pred ccccCCC------CcceeeccCcccCCCCCccccccccceEEeccCCcccCCCCCccCCcccccEEEcccCcccCc-CCc
Q 001226 523 ATLERNP------GVSFLDVRGNLLQGSIPPVFGFWSNLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGR-IPY 595 (1119)
Q Consensus 523 ~~~~~l~------~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~ 595 (1119)
.+..... ++..+...++... ..+.+....++|+.|++..++....+......+..++.+.+..+.+.+. .-.
T Consensus 735 ~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~ 813 (889)
T KOG4658|consen 735 EWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLC 813 (889)
T ss_pred ccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeee
Confidence 3322221 2222222222111 1222334557788888887777666666666666677777777777654 233
Q ss_pred ccccCCCCcEEeccC
Q 001226 596 ELGKCTKMIKLDLSD 610 (1119)
Q Consensus 596 ~~~~l~~L~~L~Ls~ 610 (1119)
..+.++++..+.++.
T Consensus 814 ~l~~l~~i~~~~l~~ 828 (889)
T KOG4658|consen 814 SLGGLPQLYWLPLSF 828 (889)
T ss_pred cCCCCceeEecccCc
Confidence 444555555444443
No 487
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.68 E-value=8.8e-09 Score=77.21 Aligned_cols=41 Identities=39% Similarity=0.726 Sum_probs=28.7
Q ss_pred CCcHHHHHHHHhcCCCC-CCCCCCCCCCCCCCCCceeeeeeee
Q 001226 24 PPSAISLVQFLDSLPKQ-SQSHLPWNQSVSTSAPCKWSGVSCY 65 (1119)
Q Consensus 24 ~~~~~~ll~~~~~~~~~-~~~~~~w~~~~~~~~~c~w~gv~C~ 65 (1119)
++|++||++||+++..+ .+.+.+|+.+. .++||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~-~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSS-DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT---S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcC-CCCCeeeccEEeC
Confidence 46899999999999964 46678998642 3689999999996
No 488
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.67 E-value=1.6e-08 Score=83.03 Aligned_cols=59 Identities=39% Similarity=0.524 Sum_probs=27.3
Q ss_pred cceEEeccCCcccCCCCCccCCcccccEEEcccCcccCcCCcccccCCCCcEEeccCcc
Q 001226 554 NLTMLDFSENRLSGSIPSELGNLENLQILRLSANKLDGRIPYELGKCTKMIKLDLSDNY 612 (1119)
Q Consensus 554 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 612 (1119)
+|++|++++|+|+...+..|.++++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444444444444444443334444444444444444444
No 489
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.67 E-value=4.7e-10 Score=127.92 Aligned_cols=197 Identities=28% Similarity=0.279 Sum_probs=131.8
Q ss_pred CCCccEEEcCCCccCCCc-chhhcCCCCCceeeeccccccccCcccccCC-CCCcEEEccccccc----------cccCc
Q 001226 263 LLQLEVLYLDDNNLEGQI-PETLWGLENLQKLVLSANKLNGTISGQISHC-NQLQVIALSRNNLV----------GQIPR 330 (1119)
Q Consensus 263 l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~----------~~~~~ 330 (1119)
+++++.|.+-.-.-.+.. |-.+..+.+|+.|.|.++.|... . .+..+ .+|++|.-. |.+. |.+..
T Consensus 83 lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~~-~-GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~n 159 (1096)
T KOG1859|consen 83 LQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLSTA-K-GLQELRHQLEKLICH-NSLDALRHVFASCGGDISN 159 (1096)
T ss_pred HhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhhh-h-hhHHHHHhhhhhhhh-ccHHHHHHHHHHhcccccc
Confidence 444455554433222222 56677778888888888877631 1 11111 234433322 2211 11111
Q ss_pred ccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCchhhhcccccceeeccCccccCCCCc-cccccCc
Q 001226 331 SVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPPEICNLAKLEVLYLFNNRIEGAIPH-QIGRMSK 409 (1119)
Q Consensus 331 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~ 409 (1119)
++. .-.|...+.+.|.+. ....++.-++.|+.|+|++|+++.. +.+..+++|++|||++|++.. +|. ....+ +
T Consensus 160 s~~-Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc-~ 233 (1096)
T KOG1859|consen 160 SPV-WNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGC-K 233 (1096)
T ss_pred chh-hhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhh-h
Confidence 111 135778888999988 5666778888999999999999854 488889999999999999984 443 22233 4
Q ss_pred ceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccceeccccceee
Q 001226 410 LVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSFY 470 (1119)
Q Consensus 410 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1119)
|+.|.+++|.++. -..+.++++|+.||+++|-|.+.-.......+..|..|+|.||++-
T Consensus 234 L~~L~lrnN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 234 LQLLNLRNNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred heeeeecccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 9999999999873 3467889999999999999887655555566788999999999874
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.65 E-value=2e-08 Score=82.47 Aligned_cols=59 Identities=37% Similarity=0.528 Sum_probs=30.5
Q ss_pred CCcEEeccCccccccCChhhhhcccCCeeEccCccCccCCCccccccccccEeecCCcc
Q 001226 602 KMIKLDLSDNYLAGSIPSEVISLEKMQSLSLQENNLSGAIPDAFSSVQSLFELQLGSNI 660 (1119)
Q Consensus 602 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 660 (1119)
+|++|++++|+++...+..|..+++|++|++++|+++...|++|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555554333444555555555555555554445555555555555555554
No 491
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.65 E-value=1.3e-07 Score=98.07 Aligned_cols=129 Identities=22% Similarity=0.253 Sum_probs=94.9
Q ss_pred CCceeeecCCccEEEEEeCCCceEEEEEeccccc--------------------------ccHHHHHHHHhhcCCC--CE
Q 001226 838 EGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE--------------------------TNFDVEIRTLSLVRHR--NI 889 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------------------------~~~~~E~~~l~~l~h~--ni 889 (1119)
.+.+||.|.-+.||.|.+.. |.++|||.-+... ...++|.+.|+++.-. .|
T Consensus 95 iG~~IGvGKEsdVY~~~~~~-g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPK-GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hccccccCccceEEEEECCC-CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 35889999999999999885 8999999753111 1245788888888643 55
Q ss_pred EEEeeeeecCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCC
Q 001226 890 LRIVGSCTKDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSE 969 (1119)
Q Consensus 890 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 969 (1119)
.+.+++ +...+|||+++|--|...- ++.+....++..|.+-+..+-.. ||||+|+.+-||+++++
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d 238 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED 238 (304)
T ss_pred CCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence 555553 4557999999886654321 12334445666666666666667 99999999999999999
Q ss_pred CceEEEecccccc
Q 001226 970 LEPKIGDFGMSKL 982 (1119)
Q Consensus 970 ~~vkl~DfGla~~ 982 (1119)
|.+.++||--+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 9999999976543
No 492
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.64 E-value=1.1e-07 Score=96.86 Aligned_cols=121 Identities=24% Similarity=0.263 Sum_probs=78.5
Q ss_pred cEEEEEeCCCceEEEEEecccc------------------------------cccHHHHHHHHhhcCCC--CEEEEeeee
Q 001226 849 TVYRTLSNNSRKHWAVKKLNRS------------------------------ETNFDVEIRTLSLVRHR--NILRIVGSC 896 (1119)
Q Consensus 849 ~Vy~~~~~~~~~~vavK~~~~~------------------------------~~~~~~E~~~l~~l~h~--niv~l~~~~ 896 (1119)
.||.|...+ +.++|+|+.+.. ....++|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 389998765 789999987311 01256799999999755 456666542
Q ss_pred ecCCceEEEEeccC--CCCHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCCCeEecCCCCCCeEeCCCCceE
Q 001226 897 TKDEHGFIVTEYMP--GGTLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSY-LHYDCVPQIIHRDIKSDNILLDSELEPK 973 (1119)
Q Consensus 897 ~~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dlkp~Nill~~~~~vk 973 (1119)
..++||||++ |..+..+.... ++......++.++...+.. +|.. |+||+|+.+.||+++++ .+.
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ----CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3479999998 55454333221 1122445677777775555 4677 99999999999999988 999
Q ss_pred EEeccccccc
Q 001226 974 IGDFGMSKLI 983 (1119)
Q Consensus 974 l~DfGla~~~ 983 (1119)
++|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999988654
No 493
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.64 E-value=4.1e-07 Score=98.47 Aligned_cols=139 Identities=17% Similarity=0.145 Sum_probs=99.6
Q ss_pred CCceeeecCCccEEEEEeCCCceEEEEEeccccc---------------ccHHHHHHHHhhcCCC--CEEEEeeeeec--
Q 001226 838 EGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE---------------TNFDVEIRTLSLVRHR--NILRIVGSCTK-- 898 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------------~~~~~E~~~l~~l~h~--niv~l~~~~~~-- 898 (1119)
.++.+-+.....|++.... |+.|.||...... ..+.+|.+.+.++... .+++.+++...
T Consensus 26 ~~e~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~ 103 (268)
T PRK15123 26 QGEVFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGS 103 (268)
T ss_pred CCcEEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecC
Confidence 3456665555667776553 6789999763211 1367899988888432 23344444432
Q ss_pred ---CCceEEEEeccCCC-CHHHhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCC------
Q 001226 899 ---DEHGFIVTEYMPGG-TLFNVLHQNEPRLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDS------ 968 (1119)
Q Consensus 899 ---~~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~------ 968 (1119)
....++|||++++. +|.+++..... ...+......++.+++..+..||.. ||+|+|+++.||+++.
T Consensus 104 ~~~~~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 104 NPATRTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred CCccceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCC
Confidence 23568999999886 89988854221 1245567778999999999999999 9999999999999975
Q ss_pred -CCceEEEecccccc
Q 001226 969 -ELEPKIGDFGMSKL 982 (1119)
Q Consensus 969 -~~~vkl~DfGla~~ 982 (1119)
++.+.++||+.++.
T Consensus 180 ~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 180 EDLKLSVIDLHRAQI 194 (268)
T ss_pred CCceEEEEECCcccc
Confidence 46789999998753
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=1.7e-08 Score=104.03 Aligned_cols=216 Identities=21% Similarity=0.274 Sum_probs=103.6
Q ss_pred CCCCCcEEEccCCccCCccChhhhh-cCCCccEEEcCCCccCC--CcchhhcCCCCCceeeeccccccccCcccccCCCC
Q 001226 237 NCRNLVEFSASSNNFGGAISPWIFK-GLLQLEVLYLDDNNLEG--QIPETLWGLENLQKLVLSANKLNGTISGQISHCNQ 313 (1119)
Q Consensus 237 ~l~~L~~L~l~~n~i~~~~~~~~~~-~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 313 (1119)
..+.++-|.+-++.|........|. ..+.+++|||.+|.|++ .+...+.++|.|+.|+|+.|.+...+...-..+.+
T Consensus 43 s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~n 122 (418)
T KOG2982|consen 43 SLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKN 122 (418)
T ss_pred cccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccc
Confidence 3334444444455544333223332 23455555555555542 22223345555555555555554332222123344
Q ss_pred CcEEEccccccccc-cCcccCCCCCCCeEEccCCcccCCCCCCCCCCCCCcEEEcccCcCcccCch--hhhcccccceee
Q 001226 314 LQVIALSRNNLVGQ-IPRSVGNLSSLNSLLLFNNRLQGTLPPELGNCGSLVDLRLQHNFIGGTIPP--EICNLAKLEVLY 390 (1119)
Q Consensus 314 L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~--~l~~l~~L~~L~ 390 (1119)
|++|-|.+..+.-. ....+..++.++.|.++.|.+. .+++..|-++...|. .+...+.+..+.
T Consensus 123 l~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w 188 (418)
T KOG2982|consen 123 LRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLW 188 (418)
T ss_pred eEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHH
Confidence 44444444433311 1122233344444444443222 112222222211111 112233334444
Q ss_pred ccCccccCCCCccccccCcceEEEeeccccccc-CCccccCCCCcCEEEccCccCcccchhhhhccCCccceecccccee
Q 001226 391 LFNNRIEGAIPHQIGRMSKLVELALYNNRLTGR-IPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLSRLDLTGNSF 469 (1119)
Q Consensus 391 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 469 (1119)
++-|++... ++++..+.+..|.+... ....+..++.+..|+|+.|+|...........+|+|..|.+++|++
T Consensus 189 ~~~~~l~r~-------Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl 261 (418)
T KOG2982|consen 189 LNKNKLSRI-------FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPL 261 (418)
T ss_pred HHHHhHHhh-------cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcc
Confidence 444444432 34667777888877643 2345566777778888888887655555566788888888888877
Q ss_pred eCcc
Q 001226 470 YGPI 473 (1119)
Q Consensus 470 ~~~~ 473 (1119)
.+.+
T Consensus 262 ~d~l 265 (418)
T KOG2982|consen 262 SDPL 265 (418)
T ss_pred cccc
Confidence 6443
No 495
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.61 E-value=1e-06 Score=98.49 Aligned_cols=167 Identities=17% Similarity=0.277 Sum_probs=128.6
Q ss_pred CCccEEEEEeCCCceEEEEEeccccccc----HHHHHHHHhhcCCCCEEEEeeeee----cCCceEEEEeccCC-CCHHH
Q 001226 846 KHGTVYRTLSNNSRKHWAVKKLNRSETN----FDVEIRTLSLVRHRNILRIVGSCT----KDEHGFIVTEYMPG-GTLFN 916 (1119)
Q Consensus 846 ~fg~Vy~~~~~~~~~~vavK~~~~~~~~----~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lV~e~~~~-gsL~~ 916 (1119)
.-.+.|++....+|..|++|++...+.+ ...-+++++++.|+|||++.+++. .+...++||+|.|+ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3457899999999999999999544433 234577899999999999999886 34567999999987 46766
Q ss_pred hhccCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEeCCCCceEEEecccccccc
Q 001226 917 VLHQNEP------------RLVLDWNTRYHIALGIAQGLSYLHYDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLIS 984 (1119)
Q Consensus 917 ~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~ 984 (1119)
+.-...+ ....++...|.++.|+..||.++|+. |+.-+-+.|.+|+++.+.+++|+..|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 6433221 12467889999999999999999999 99999999999999999999999888765553
Q ss_pred CCCCCCcccccccCCCcccccccCCCCCCCcchHHHHHHHHHHHHhCCCC
Q 001226 985 DSHSSSTRSAIVGSLGYIAPENAYSTRLTEKSDVYSYGVILFELLFRKMP 1034 (1119)
Q Consensus 985 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p 1034 (1119)
.+. . |.+.+ -.+-|.=.+|.++..+.+|..-
T Consensus 445 ~d~--------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 445 EDP--------------T--EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC--------------C--cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 321 0 11111 2356999999999999999743
No 496
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.53 E-value=9.6e-09 Score=104.54 Aligned_cols=218 Identities=22% Similarity=0.215 Sum_probs=129.7
Q ss_pred hhhhccCCcccEEEcCCCcccC----CCCcccccCCCccEEEcccc---cccccCCc-------cccccCccCEEEccCc
Q 001226 89 ISYICKNQHLLSLDLSGNEFTG----SIPKQLGNCGQLKTLLLNDN---RFQGSIPP-------EIFKLKRLSWLDLGYN 154 (1119)
Q Consensus 89 ~~~~~~l~~l~~L~Ls~n~~~~----~~~~~l~~l~~L~~L~L~~n---~i~~~~p~-------~l~~l~~L~~L~Ls~n 154 (1119)
+.-+..+..++.+|||+|-|.. .+...|.+-.+|+..++++- +..+.+|+ ++.++++|+..+||.|
T Consensus 23 ~eel~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDN 102 (388)
T COG5238 23 VEELEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDN 102 (388)
T ss_pred HHHHHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeecccc
Confidence 3345567888999999998864 35666777788999888775 23333433 4566889999999999
Q ss_pred cccCCCCccc----ccccccceeeecccccccccCccCC-------------CcccccEEEeccccccccCCCCCccccc
Q 001226 155 SLSGKIPPQV----SLCYSLESIGFHNNFLNGELPNDIC-------------SLPKLKSLYLNTNNLTGLLPEFPNSCAI 217 (1119)
Q Consensus 155 ~l~~~~p~~l----~~l~~L~~L~L~~n~l~~~~~~~l~-------------~l~~L~~L~L~~n~l~~~~~~~~~~~~l 217 (1119)
.+....|..+ ++-+.|++|.+++|.+....-..++ .-|.|++.....|++..-..
T Consensus 103 Afg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~-------- 174 (388)
T COG5238 103 AFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSK-------- 174 (388)
T ss_pred ccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcH--------
Confidence 9887776654 4557888888888877644433333 24667777777776651110
Q ss_pred eeeeeeccccccCccccccCCCCCcEEEccCCccCCcc----ChhhhhcCCCccEEEcCCCccCCC----cchhhcCCCC
Q 001226 218 LHLLIHENDFVGSLPTSLSNCRNLVEFSASSNNFGGAI----SPWIFKGLLQLEVLYLDDNNLEGQ----IPETLWGLEN 289 (1119)
Q Consensus 218 ~~l~l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i~~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~ 289 (1119)
.-....+..-.+|+++.+..|.|.... .-..+..+.+|++|||++|-++-. ..+++..++.
T Consensus 175 -----------~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~ 243 (388)
T COG5238 175 -----------ELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNL 243 (388)
T ss_pred -----------HHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccch
Confidence 011112222346677777777665221 111123356677777777766532 2234445566
Q ss_pred CceeeeccccccccCcccc----c--CCCCCcEEEccccccc
Q 001226 290 LQKLVLSANKLNGTISGQI----S--HCNQLQVIALSRNNLV 325 (1119)
Q Consensus 290 L~~L~Ls~N~l~~~~~~~~----~--~l~~L~~L~Ls~N~l~ 325 (1119)
|++|.+..|-++....+.+ . ..++|..|-..+|.+.
T Consensus 244 lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 244 LRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred hhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 6777777766654333221 1 1344555555555444
No 497
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=3.4e-09 Score=109.21 Aligned_cols=180 Identities=25% Similarity=0.258 Sum_probs=98.3
Q ss_pred CccCEEEccCccccC-CCCcccccccccceeeecccccccccCccCCCcccccEEEecccc-ccccCCCCCccccceeee
Q 001226 144 KRLSWLDLGYNSLSG-KIPPQVSLCYSLESIGFHNNFLNGELPNDICSLPKLKSLYLNTNN-LTGLLPEFPNSCAILHLL 221 (1119)
Q Consensus 144 ~~L~~L~Ls~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~~~l~~l~ 221 (1119)
++|++||||+..|+- ..-.-+..|++|+.|.|.++.+.+.+...+++-.+|+.|+|+.+. ++.
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~--------------- 249 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTE--------------- 249 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccch---------------
Confidence 348888888877753 222345677888888888888888888888888888888888763 220
Q ss_pred eeccccccCccccccCCCCCcEEEccCCccCCccChhhhhcCCCccEEEcCCCccCCCcchhhcCCCCCceeeecccccc
Q 001226 222 IHENDFVGSLPTSLSNCRNLVEFSASSNNFGGAISPWIFKGLLQLEVLYLDDNNLEGQIPETLWGLENLQKLVLSANKLN 301 (1119)
Q Consensus 222 l~~n~~~~~lp~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 301 (1119)
| .+.--+.+|+.|.+|+++.|.+...+....... + -++|+.|+|+++.=.
T Consensus 250 ---n----~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~h---------------------i--se~l~~LNlsG~rrn 299 (419)
T KOG2120|consen 250 ---N----ALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAH---------------------I--SETLTQLNLSGYRRN 299 (419)
T ss_pred ---h----HHHHHHHhhhhHhhcCchHhhccchhhhHHHhh---------------------h--chhhhhhhhhhhHhh
Confidence 0 111223445555555555544433221111111 1 134555555544211
Q ss_pred ---ccCcccccCCCCCcEEEccccc-cccccCcccCCCCCCCeEEccCCcccCCCCC---CCCCCCCCcEEEcccC
Q 001226 302 ---GTISGQISHCNQLQVIALSRNN-LVGQIPRSVGNLSSLNSLLLFNNRLQGTLPP---ELGNCGSLVDLRLQHN 370 (1119)
Q Consensus 302 ---~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~l~~l~~L~~L~L~~N 370 (1119)
..+......+++|.+||||+|. ++...-..|..++.|++|.++.|.. .+|. .+...|+|.+|++-++
T Consensus 300 l~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 300 LQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 1112223456666666666543 3333333455666677777766653 2333 3455677777776653
No 498
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.43 E-value=7.1e-08 Score=99.64 Aligned_cols=87 Identities=24% Similarity=0.286 Sum_probs=51.3
Q ss_pred ccccceeeccCccccC--CCCccccccCcceEEEeecccccccCCccccCCCCcCEEEccCccCcccchhhhhccCCccc
Q 001226 383 LAKLEVLYLFNNRIEG--AIPHQIGRMSKLVELALYNNRLTGRIPPDITRLRNLQFLSLAHNHLTGEVALELGKHFPYLS 460 (1119)
Q Consensus 383 l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 460 (1119)
.+.++.+||.+|.|+. .+...+.++|.|+.|+|+.|++...+...-..+.+|++|-|.+-.+.-.....+.+.+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4556666666666652 22233456666666666666665433222245567777777776666545555566677777
Q ss_pred eecccccee
Q 001226 461 RLDLTGNSF 469 (1119)
Q Consensus 461 ~L~L~~N~l 469 (1119)
+|++|.|.+
T Consensus 150 elHmS~N~~ 158 (418)
T KOG2982|consen 150 ELHMSDNSL 158 (418)
T ss_pred hhhhccchh
Confidence 777777743
No 499
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.41 E-value=1.6e-06 Score=101.67 Aligned_cols=139 Identities=18% Similarity=0.184 Sum_probs=95.0
Q ss_pred CCceeeecCCccEEEEEeCCCceEEEEEeccccc--------------------------------------------cc
Q 001226 838 EGRIIGKGKHGTVYRTLSNNSRKHWAVKKLNRSE--------------------------------------------TN 873 (1119)
Q Consensus 838 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------------------------------------------~~ 873 (1119)
..+.++.++-|.||+|+.+. |+.||||+.+... -+
T Consensus 129 ~~~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD 207 (517)
T COG0661 129 EPEPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD 207 (517)
T ss_pred CCCchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence 34789999999999999987 9999999874211 12
Q ss_pred HHHHHHHHhhcC----CCCEEEEeeeee-cCCceEEEEeccCCCCHHHhhccCCCCCCCCHHHHHHHHHHHHHH-HHHHH
Q 001226 874 FDVEIRTLSLVR----HRNILRIVGSCT-KDEHGFIVTEYMPGGTLFNVLHQNEPRLVLDWNTRYHIALGIAQG-LSYLH 947 (1119)
Q Consensus 874 ~~~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~-l~~LH 947 (1119)
+.+|+.-+.+++ ..--+++-.++. -.+...++|||++|..+.+...-... ..+.+ .++..++++ +..+-
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k---~ia~~~~~~f~~q~~ 282 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GIDRK---ELAELLVRAFLRQLL 282 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCCHH---HHHHHHHHHHHHHHH
Confidence 445666655552 222333333333 35667899999999988887432221 24433 333333333 33343
Q ss_pred hCCCCCeEecCCCCCCeEeCCCCceEEEeccccccccC
Q 001226 948 YDCVPQIIHRDIKSDNILLDSELEPKIGDFGMSKLISD 985 (1119)
Q Consensus 948 ~~~~~~ivH~Dlkp~Nill~~~~~vkl~DfGla~~~~~ 985 (1119)
.. |++|+|..|.||+++.+|++.+.|||+...+.+
T Consensus 283 ~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 283 RD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred hc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 45 999999999999999999999999999887654
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.39 E-value=7.9e-09 Score=118.16 Aligned_cols=179 Identities=23% Similarity=0.255 Sum_probs=112.0
Q ss_pred hccCCcccEEEcCCCcccCCCCcccccC-CCccEEEcccc--cccccCCccccc------cCccCEEEccCccccCCCCc
Q 001226 92 ICKNQHLLSLDLSGNEFTGSIPKQLGNC-GQLKTLLLNDN--RFQGSIPPEIFK------LKRLSWLDLGYNSLSGKIPP 162 (1119)
Q Consensus 92 ~~~l~~l~~L~Ls~n~~~~~~~~~l~~l-~~L~~L~L~~n--~i~~~~p~~l~~------l~~L~~L~Ls~n~l~~~~p~ 162 (1119)
+..+..|++|.|.++.+.- ...+..+ .+|++|-=++. .+...+....+. -..|..-+.++|++. ..-.
T Consensus 105 ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~mD~ 181 (1096)
T KOG1859|consen 105 IFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LMDE 181 (1096)
T ss_pred eccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hHHH
Confidence 4567777888888777652 1122111 12333322111 111111111111 134777788888876 3445
Q ss_pred ccccccccceeeecccccccccCccCCCcccccEEEeccccccccCCCCCccccceeeeeeccccccCccccccCCCCCc
Q 001226 163 QVSLCYSLESIGFHNNFLNGELPNDICSLPKLKSLYLNTNNLTGLLPEFPNSCAILHLLIHENDFVGSLPTSLSNCRNLV 242 (1119)
Q Consensus 163 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~l~l~~n~~~~~lp~~l~~l~~L~ 242 (1119)
++.-++.|+.|+|++|+++... .+..+++|++|||++|.++-++--....+++..|.+.+|.++.- ..+.++++|+
T Consensus 182 SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lrnN~l~tL--~gie~LksL~ 257 (1096)
T KOG1859|consen 182 SLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLRNNALTTL--RGIENLKSLY 257 (1096)
T ss_pred HHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhhheeeeecccHHHhh--hhHHhhhhhh
Confidence 6777788888888888887543 67888899999999998886554445556666666666665422 3566777888
Q ss_pred EEEccCCccCCccChhhhhcCCCccEEEcCCCccC
Q 001226 243 EFSASSNNFGGAISPWIFKGLLQLEVLYLDDNNLE 277 (1119)
Q Consensus 243 ~L~l~~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~ 277 (1119)
.||+++|-+.+.-....+..|..|++|+|.+|.+-
T Consensus 258 ~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 258 GLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 88888887776666666666777777777777764
Done!