Your job contains 1 sequence.
>001231
MGKDVEEGEISDTASVEEISEEDFKIKQEEVVKVVKETKPIKVGGGEAAARVWTMRDLYN
KYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSSPASSVASVNSGAAAG
KDDKKVVEKVVIDDSGDEIEKEEGELEEGEIELDLESESNEKVSEQVKEEMKLINVESIR
EALESVLRGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSM
NHVLKEQNKEILSRLLSLIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDMLAMHGVN
GKDSNIVTENAVNDLNFKEKVPLPVDSLMQNKPLEASKPGPPGYRSRGVLLPLLDPHKVH
DVDSLPSPTRETTPSVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYETDALRAFSS
YQQKFGRNSFFMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSS
QPMDISQPMDISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNALN
LNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIY
GSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNVVVSGNEPAPATT
PSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNTMHPPIPSSIPPV
SVTCSIPSGILSKPMDELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGS
KENLNFQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSP
IQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAA
IQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPH
RHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGR
VISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP
CSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVRQQLH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001231
(1118 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051164 - symbol:CPL3 "C-terminal domain phosp... 1156 8.3e-169 3
TAIR|locus:4010714056 - symbol:CPL4 "C-terminal domain ph... 345 2.9e-30 1
TAIR|locus:2194656 - symbol:AT1G43600 species:3702 "Arabi... 236 9.3e-20 2
TAIR|locus:2045044 - symbol:AT2G04930 species:3702 "Arabi... 246 1.2e-19 1
TAIR|locus:2162565 - symbol:AT5G54210 species:3702 "Arabi... 244 1.9e-19 1
TAIR|locus:2194666 - symbol:AT1G43610 species:3702 "Arabi... 233 2.8e-18 1
TAIR|locus:2090467 - symbol:AT3G17550 species:3702 "Arabi... 233 2.8e-18 1
TAIR|locus:2012943 - symbol:AT1G20320 species:3702 "Arabi... 231 1.3e-16 1
TAIR|locus:4515103095 - symbol:AT3G19595 species:3702 "Ar... 221 3.8e-16 1
TAIR|locus:2056256 - symbol:AT2G02290 species:3702 "Arabi... 199 3.9e-13 1
TAIR|locus:2154458 - symbol:AT5G23470 species:3702 "Arabi... 198 5.1e-13 1
POMBASE|SPAC19B12.05c - symbol:fcp1 "CTD phosphatase Fcp1... 206 8.2e-12 2
MGI|MGI:1926953 - symbol:Ctdp1 "CTD (carboxy-terminal dom... 199 8.4e-12 1
UNIPROTKB|G4N817 - symbol:MGG_03485 "RNA polymerase II su... 196 1.5e-11 1
ZFIN|ZDB-GENE-040720-1 - symbol:ctdp1 "CTD (carboxy-termi... 195 2.2e-11 1
DICTYBASE|DDB_G0271690 - symbol:DDB_G0271690 "putative RN... 188 9.6e-11 1
UNIPROTKB|D4A8R2 - symbol:Ctdp1 "Protein Ctdp1" species:1... 199 2.7e-10 2
UNIPROTKB|F1NZN8 - symbol:CTDP1 "Uncharacterized protein"... 189 2.9e-10 2
ASPGD|ASPL0000035800 - symbol:podH species:162425 "Emeric... 183 3.6e-10 1
CGD|CAL0004856 - symbol:orf19.6742 species:5476 "Candida ... 182 4.2e-10 1
UNIPROTKB|K7EJD2 - symbol:CTDP1 "RNA polymerase II subuni... 195 4.4e-10 2
UNIPROTKB|Q9Y5B0 - symbol:CTDP1 "RNA polymerase II subuni... 195 7.3e-10 2
FB|FBgn0035026 - symbol:Fcp1 species:7227 "Drosophila mel... 176 2.3e-09 1
UNIPROTKB|E2R1Y2 - symbol:CTDP1 "Uncharacterized protein"... 189 2.3e-09 2
SGD|S000004890 - symbol:FCP1 "Carboxy-terminal domain (CT... 178 2.2e-08 2
TAIR|locus:2143019 - symbol:SSP5 "SCP1-like small phospha... 148 3.5e-07 1
WB|WBGene00009479 - symbol:fcp-1 species:6239 "Caenorhabd... 163 6.6e-07 2
UNIPROTKB|E2QVP8 - symbol:CTDSPL2 "Uncharacterized protei... 123 0.00053 2
>TAIR|locus:2051164 [details] [associations]
symbol:CPL3 "C-terminal domain phosphatase-like 3"
species:3702 "Arabidopsis thaliana" [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008420 "CTD phosphatase activity" evidence=ISS] [GO:0008022
"protein C-terminus binding" evidence=IPI] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0000394
"RNA splicing, via endonucleolytic cleavage and ligation"
evidence=RCA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=RCA] InterPro:IPR004274 InterPro:IPR011947
Pfam:PF03031 PROSITE:PS50969 SMART:SM00577 InterPro:IPR001357
Pfam:PF00533 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0046872 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0009651 GO:GO:0006351 GO:GO:0003723
GO:GO:0009788 GO:GO:0004721 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 eggNOG:COG5190 EMBL:AC002332 EMBL:AF486633
IPI:IPI00534740 PIR:G84746 RefSeq:NP_180912.2 UniGene:At.43643
ProteinModelPortal:Q8LL04 SMR:Q8LL04 STRING:Q8LL04 PaxDb:Q8LL04
PRIDE:Q8LL04 EnsemblPlants:AT2G33540.1 GeneID:817919
KEGG:ath:AT2G33540 TAIR:At2g33540 HOGENOM:HOG000085035
InParanoid:Q8LL04 OMA:HPLWQTA PhylomeDB:Q8LL04
ProtClustDB:CLSN2680006 Genevestigator:Q8LL04 TIGRFAMs:TIGR02250
Uniprot:Q8LL04
Length = 1241
Score = 1156 (412.0 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 240/402 (59%), Positives = 289/402 (71%)
Query: 734 PMDELGKVRMKPRDPRRVLHGNALQRS-GSLGPEFKTDGPSAPCT---QGSKENLNFQKQ 789
P E G +RMKPRDPRR+LHG+ LQR+ S+ + K + PS T +G E+L Q
Sbjct: 729 PAAESGSIRMKPRDPRRILHGSTLQRTDSSMEKQTKVNDPSTLGTLTMKGKAEDLETPPQ 788
Query: 790 LGAPE-------AKPVLSQSVLQ---PDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNS 839
L + +K +S +L PD + QFTKNLK IAD + VSQ L + P S +S
Sbjct: 789 LDPRQNISQNGTSKMKISGELLSGKTPDFSTQFTKNLKSIADMVVVSQQLGNPP-ASMHS 847
Query: 840 PIQPGQIKSGADMKAVVTNHD--DKQTGTGSGPEAGPVG-AHPQSAWGDVEHLFEGYDDQ 896
Q+K+ D+K +N + D+ + G ++WGDVEHLFEGYDD
Sbjct: 848 V----QLKTERDVKHNPSNPNAQDEDVSVSAASVTAAAGPTRSMNSWGDVEHLFEGYDDI 903
Query: 897 QKAAIQKERTRRLEEQKKMFSARKXXXXXXXXXXXXNSAKFHEVDPVHDEILRKKEEQDR 956
Q+ AIQ+ER RRLEEQ KMF+++K NSAKF+EV+ H+EILRKKEEQDR
Sbjct: 904 QRVAIQRERVRRLEEQNKMFASQKLSLVLDIDHTLLNSAKFNEVESRHEEILRKKEEQDR 963
Query: 957 EKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVL 1016
EKP+RHLFRF HMGMWTKLRPGIW FLE+ASKL+E+HLYTMGNKLYATEMAK+LDPKGVL
Sbjct: 964 EKPYRHLFRFLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLDPKGVL 1023
Query: 1017 FAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY 1076
F GRVIS+GDDGDP DGDERVPKSKDLEGV+GMES+VVIIDDSVRVWP +K+NLI VERY
Sbjct: 1024 FNGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLIAVERY 1083
Query: 1077 TYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
YFPCSRRQFGLLGPSLLE+D DE E+GTLASSL V +++H
Sbjct: 1084 LYFPCSRRQFGLLGPSLLELDRDEVPEEGTLASSLAVIEKIH 1125
Score = 354 (129.7 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 95/234 (40%), Positives = 137/234 (58%)
Query: 161 EKVSEQ--VKEEMKLINVESIREALES--VLRGDISFEGVCSKLEFTLESLRELVNENN- 215
+KV + +KE V+ IR LES ++ FEGVCS++ LESLRELV++N+
Sbjct: 174 DKVEDDRILKERDLEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGALESLRELVSDNDD 233
Query: 216 VPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSLIKSHEPPLFSSNQIKEM 275
P +D L+QL+F+++Q+++ VFCSMN++ KE+NKE +SRLL+L+ H S NQ E+
Sbjct: 234 FPKRDTLVQLSFASLQTINYVFCSMNNISKERNKETMSRLLTLVNDHFSQFLSFNQKNEI 293
Query: 276 EAMLSSLVTRANDKEKDMLAMHGVNGKDS-NIVTENAVNDLNFKEKVPLPVDSLMQNKPL 334
E M L A + G + +++ N +T+ + D +F L +
Sbjct: 294 ETMNQDLSRSA------IAVFAGTSSEENVNQMTQPSNGD-SF----------LAKKLTS 336
Query: 335 EASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQ-RALVVGDG 387
E++ G RSR +LPLLD HK HD DSLPSPTRETTPS+PV R +V G
Sbjct: 337 ESTHRGAAYLRSRLPMLPLLDLHKDHDADSLPSPTRETTPSLPVNGRHTMVRPG 390
Score = 316 (116.3 bits), Expect = 8.5e-165, Sum P(3) = 8.5e-165
Identities = 115/359 (32%), Positives = 159/359 (44%)
Query: 268 SSNQI-KEM-EAMLSSLVTRANDKEKDMLAMHGVNGKDS--NIVTENAV-------NDLN 316
S N I KE + +S L+T ND L+ + N ++ ++ +A+ ++ N
Sbjct: 257 SMNNISKERNKETMSRLLTLVNDHFSQFLSFNQKNEIETMNQDLSRSAIAVFAGTSSEEN 316
Query: 317 FKEKV-PLPVDSLMQNK-PLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTP 374
+ P DS + K E++ G RSR +LPLLD HK HD DSLPSPTRETTP
Sbjct: 317 VNQMTQPSNGDSFLAKKLTSESTHRGAAYLRSRLPMLPLLDLHKDHDADSLPSPTRETTP 376
Query: 375 SVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNX 434
S+PV MV+ + S E K YE+DA +A S+YQQKFG NS F
Sbjct: 377 SLPVNGRHT----MVRPGFPVGRESQTTEGAKVYSYESDARKAVSTYQQKFGLNSVF-KT 431
Query: 435 XXXXXXXXXXXXXXXXXXXXXXXXATAVDQPKPVNMPTLGQQ-PVSSQPMDISQPMDISS 493
++ V P + GQ P+ S S P+ S
Sbjct: 432 DDLPSPTPSGEPNDGNGDVGGEVSSSVVKSSNPGSHLIYGQDVPLPSNFNSRSMPVANSV 491
Query: 494 VQALTTANNSAPASSGYXXXXXXXXXXXXXIKSRDPRLRFASSNALNLN--HQPAPILHN 551
+ + S A S KSRDPRLR A +A N+ + N
Sbjct: 492 SSTVPPHHLSIHAISAPTASDQTVKPSA---KSRDPRLRLAKPDAANVTIYSYSSGDARN 548
Query: 552 APKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTD 610
KVE +++ RKQK +E ++DGPA KRQ++ D G+GGWLEDT+
Sbjct: 549 LSKVELSADLVNPRKQKAADEFLIDGPAWKRQKSD-------TDAPKAAGTGGWLEDTE 600
Score = 219 (82.2 bits), Expect = 2.7e-58, Sum P(3) = 2.7e-58
Identities = 92/321 (28%), Positives = 134/321 (41%)
Query: 525 KSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRV-MSSRKQKTVEEPVLDGPALKRQ 583
KSRDPRLR A +A N+ +++ + +V +S+ ++ D +
Sbjct: 520 KSRDPRLRLAKPDAANVTIYS----YSSGDARNLSKVELSADLVNPRKQKAADEFLIDGP 575
Query: 584 RNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITS 643
+ S D G+GGWLEDT+ + LL ES R ++NG TS +S
Sbjct: 576 AWKRQKSDT--DAPKAAGTGGWLEDTE-------SSGLL--KLESKPRLIENGVTSMTSS 624
Query: 644 GTPNVVVSGNEXXXXXXXXXXXXXXXXXKDIAVNPTMLLNILKMGXXXXXXXXXXXXSND 703
P VS ++ KDIAVNPTMLLN+LKMG D
Sbjct: 625 VMPTSAVSVSQKVRTASTDTASLQSLL-KDIAVNPTMLLNLLKMGERQKVPEKAIQKPMD 683
Query: 704 ---------SSMNT-MHXXXXXXXXXXXXXXXXXXGIL-----SKPMDELGKVRMKPRDP 748
SS+ + G+L + P E G +RMKPRDP
Sbjct: 684 PRRAAQLPGSSVQPGVSTPLSIPASNALAANSLNSGVLQDSSQNAPAAESGSIRMKPRDP 743
Query: 749 RRVLHGNALQRS-GSLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQPD 807
RR+LHG+ LQR+ S+ + K + PS T G+ L + + E P L + +
Sbjct: 744 RRILHGSTLQRTDSSMEKQTKVNDPS---TLGT---LTMKGKAEDLETPPQLDP---RQN 794
Query: 808 ITQQFTKNLKHIADFMSVSQP 828
I+Q T +K + +S P
Sbjct: 795 ISQNGTSKMKISGELLSGKTP 815
Score = 169 (64.5 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 42/99 (42%), Positives = 52/99 (52%)
Query: 4 DVEEGEISDTASVE-EISEEDFXXXXXXXXXXXXXXXXXXXGGGEAAA----RVWTMRDL 58
DVEEGEI D+ + E E+ + GGG + RVWTM +L
Sbjct: 26 DVEEGEIPDSVNTEIEVKHKSTTTTADVGGDVDVGVVAGGRGGGGGGSNGNSRVWTMEEL 85
Query: 59 YNKYPAICRGYG-PGLHNLAWAQAVQNKPLNEIFVMEAE 96
++YPA R Y GL NLAWA+AVQNKP NE VM+ E
Sbjct: 86 ISQYPAY-RPYANSGLSNLAWARAVQNKPFNEGLVMDYE 123
Score = 73 (30.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 37/178 (20%), Positives = 72/178 (40%)
Query: 223 IQLAFSAVQSVHSVFCSMNHV--LKEQNKEILSRLLSLIKSHEPPLFSSNQIKEMEAMLS 280
++ F + V V L+EQNK S+ LSL+ + L +S + E+E+
Sbjct: 893 VEHLFEGYDDIQRVAIQRERVRRLEEQNKMFASQKLSLVLDIDHTLLNSAKFNEVESRHE 952
Query: 281 SLVTRANDKEKDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPLPVDS---LMQNK--PLE 335
++ + +++++ H + T+ NF EK + M NK E
Sbjct: 953 EILRKKEEQDREKPYRHLFRFLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATE 1012
Query: 336 ASKP-GPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGMVKSW 392
+K P G G ++ D D D +++ + ++ ++V+ D V+ W
Sbjct: 1013 MAKLLDPKGVLFNGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVW 1070
Score = 57 (25.1 bits), Expect = 2.2e-41, Sum P(3) = 2.2e-41
Identities = 25/121 (20%), Positives = 40/121 (33%)
Query: 466 KPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYXXXXXXXXXXXXXIK 525
KP++ Q P SS +S P+ I + AL + ++ +K
Sbjct: 680 KPMDPRRAAQLPGSSVQPGVSTPLSIPASNALAANSLNSGVLQDSSQNAPAAESGSIRMK 739
Query: 526 SRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQRN 585
RDPR R + L +G + K + +E P P +N
Sbjct: 740 PRDPR-RILHGSTLQRTDSSMEKQTKVNDPSTLGTLTMKGKAEDLETPPQLDPRQNISQN 798
Query: 586 G 586
G
Sbjct: 799 G 799
Score = 47 (21.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 197 CSKLEFTL--ESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILS 253
CS+ +F L SL EL + + VP + L + + ++ +H F S + + + IL+
Sbjct: 1088 CSRRQFGLLGPSLLEL-DRDEVPEEGTLAS-SLAVIEKIHQNFFSHTSLDEVDVRNILA 1144
Score = 45 (20.9 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 25/104 (24%), Positives = 42/104 (40%)
Query: 737 ELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAK 796
E KV D R+ + + Q+ L FKTD +P G + N +G +
Sbjct: 401 EGAKVYSYESDARKAV--STYQQKFGLNSVFKTDDLPSPTPSGEPNDGN--GDVGGEVSS 456
Query: 797 PVLSQSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSP 840
V+ S P + +++ ++F S S P+ + VS P
Sbjct: 457 SVVKSS--NPGSHLIYGQDVPLPSNFNSRSMPVANS--VSSTVP 496
>TAIR|locus:4010714056 [details] [associations]
symbol:CPL4 "C-terminal domain phosphatase-like 4"
species:3702 "Arabidopsis thaliana" [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0009651
"response to salt stress" evidence=IEP] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0046872
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0009651 GO:GO:0006351 GO:GO:0003723 GO:GO:0004721
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AB013396
eggNOG:COG5190 TIGRFAMs:TIGR02250 EMBL:DQ503426 IPI:IPI00570463
RefSeq:NP_001078764.1 UniGene:At.71283 ProteinModelPortal:Q00IB6
SMR:Q00IB6 STRING:Q00IB6 PaxDb:Q00IB6 PRIDE:Q00IB6
EnsemblPlants:AT5G58003.1 GeneID:5008312 KEGG:ath:AT5G58003
TAIR:At5g58003 HOGENOM:HOG000239575 OMA:ILDDTEY PhylomeDB:Q00IB6
ProtClustDB:CLSN2699127 Genevestigator:Q00IB6 Uniprot:Q00IB6
Length = 440
Score = 345 (126.5 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 79/156 (50%), Positives = 100/156 (64%)
Query: 963 LFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 1022
LF M M TKLRP + +FL+ AS++F M++YTMG++ YA +MAK+LDPKG F RVI
Sbjct: 167 LFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVI 226
Query: 1023 SRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCS 1082
SR DDG V K L+ VLG ESAV+I+DD+ WP +K NLIV+ERY +F S
Sbjct: 227 SR-DDGT-------VRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSS 278
Query: 1083 RRQFGLLGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
RQF SL E+ DE DG LA+ L V +Q H
Sbjct: 279 CRQFDHRYKSLSELKSDESEPDGALATVLKVLKQAH 314
>TAIR|locus:2194656 [details] [associations]
symbol:AT1G43600 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031
PROSITE:PS50969 SMART:SM00577 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 GO:GO:0004721 eggNOG:COG5190
TIGRFAMs:TIGR02250 EMBL:AC007203 EMBL:BT029450 IPI:IPI00525769
RefSeq:NP_175025.1 UniGene:At.49949 ProteinModelPortal:Q3E7I8
DNASU:840944 EnsemblPlants:AT1G43600.1 GeneID:840944
KEGG:ath:AT1G43600 TAIR:At1g43600 HOGENOM:HOG000131609
InParanoid:Q3E7I8 OMA:LEDVHKR PhylomeDB:Q3E7I8
ProtClustDB:CLSN2679538 Genevestigator:Q3E7I8 Uniprot:Q3E7I8
Length = 221
Score = 236 (88.1 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 58/145 (40%), Positives = 82/145 (56%)
Query: 974 KLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDG 1033
KLRP + FL A+KLF MH+YTMG+ YA ++ K++DP V F RVI+R + PF+
Sbjct: 68 KLRPFLHEFLLEANKLFTMHVYTMGSSSYAKQVLKLIDPDKVYFGKRVITR--EASPFN- 124
Query: 1034 DERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSL 1093
KS DL + + VVI+DD+V VWP +K NL+ + +Y YF G S
Sbjct: 125 -----KSLDL--LAADKRRVVIVDDTVHVWPFHKRNLLQITKYVYFKVD----GTKWDSY 173
Query: 1094 LEIDHDERSEDGTLASSLGVRQQLH 1118
E DE +G+LA+ L + +H
Sbjct: 174 AEAKKDESQSNGSLANVLKFLEDVH 198
Score = 37 (18.1 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 278 MLSSLVTRANDKEKDMLAMHGVNGKDSNIVTENAVNDLNFKEK 320
ML +T ++K +H V D ++ V+DL+ +EK
Sbjct: 1 MLKKHLTTQLFQKKKKKKLHLVLDLDHTLLHSVLVSDLSKREK 43
>TAIR|locus:2045044 [details] [associations]
symbol:AT2G04930 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 eggNOG:COG5190 TIGRFAMs:TIGR02250 EMBL:AC007211
HOGENOM:HOG000131609 ProtClustDB:CLSN2679395 IPI:IPI00542777
PIR:C84463 RefSeq:NP_178570.1 UniGene:At.66163
ProteinModelPortal:Q9SI33 SMR:Q9SI33 STRING:Q9SI33 PRIDE:Q9SI33
EnsemblPlants:AT2G04930.1 GeneID:815040 KEGG:ath:AT2G04930
TAIR:At2g04930 InParanoid:Q9SI33 OMA:SEKKTDE PhylomeDB:Q9SI33
Genevestigator:Q9SI33 Uniprot:Q9SI33
Length = 277
Score = 246 (91.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 58/145 (40%), Positives = 87/145 (60%)
Query: 974 KLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDG 1033
KLRP + FL+ A+++F M +YTMG+++YA + +++DPK + F RVI++
Sbjct: 120 KLRPFVRDFLKEANEMFTMFVYTMGSRIYAKAILEMIDPKKLYFGNRVITK--------- 170
Query: 1034 DERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSL 1093
DE P+ K L VL E VVI+DD+ +WPH+K NLI + +Y YF R+ GL S
Sbjct: 171 DES-PRMKTLNLVLAEERGVVIVDDTRDIWPHHKNNLIQIRKYKYF----RRSGLDSNSY 225
Query: 1094 LEIDHDERSEDGTLASSLGVRQQLH 1118
E DE DG LA+ L + +++H
Sbjct: 226 SEKKTDEGENDGGLANVLKLLREVH 250
>TAIR|locus:2162565 [details] [associations]
symbol:AT5G54210 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 EMBL:AB010695 eggNOG:COG5190 TIGRFAMs:TIGR02250
HOGENOM:HOG000131609 IPI:IPI00536751 RefSeq:NP_200232.1
UniGene:At.55541 ProteinModelPortal:Q9FL74 SMR:Q9FL74 STRING:Q9FL74
EnsemblPlants:AT5G54210.1 GeneID:835509 KEGG:ath:AT5G54210
TAIR:At5g54210 InParanoid:Q9FL74 OMA:KIDSEIN PhylomeDB:Q9FL74
ProtClustDB:CLSN2916440 Genevestigator:Q9FL74 Uniprot:Q9FL74
Length = 306
Score = 244 (91.0 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 61/167 (36%), Positives = 89/167 (53%)
Query: 952 EEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLD 1011
EE+D + R L KLRP + FL+ A+K+F M++YTMG++ YA + ++D
Sbjct: 117 EEEDSREDLRRLNGGYSSEFLIKLRPFVHEFLKEANKMFSMYVYTMGDRDYAMNVLNLID 176
Query: 1012 PKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI 1071
P+ V F RVI+R + P K L+ VL E VVI+DD+ VWP +K NL+
Sbjct: 177 PEKVYFGDRVITRNES----------PYIKTLDLVLADECGVVIVDDTPHVWPDHKRNLL 226
Query: 1072 VVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
+ +Y YF R S E DE DG+LA+ L V +Q++
Sbjct: 227 EITKYNYFSDKTRHDVKYTKSYAEEKRDESRNDGSLANVLKVIKQVY 273
>TAIR|locus:2194666 [details] [associations]
symbol:AT1G43610 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031
PROSITE:PS50969 SMART:SM00577 EMBL:CP002684 GO:GO:0005634
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 TIGRFAMs:TIGR02250 EMBL:AC007203
ProtClustDB:CLSN2679538 EMBL:DQ446329 IPI:IPI00532113
RefSeq:NP_175026.1 UniGene:At.52014 ProteinModelPortal:Q3ECX9
SMR:Q3ECX9 EnsemblPlants:AT1G43610.1 GeneID:840945
KEGG:ath:AT1G43610 TAIR:At1g43610 InParanoid:Q3ECX9 OMA:FELNIFT
PhylomeDB:Q3ECX9 ArrayExpress:Q3ECX9 Genevestigator:Q3ECX9
Uniprot:Q3ECX9
Length = 255
Score = 233 (87.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 58/145 (40%), Positives = 82/145 (56%)
Query: 974 KLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDG 1033
KLRP + FL A+KLF MH+YTMG+ YA ++ K++DP V F RVI+R + PF+
Sbjct: 102 KLRPFLHEFLLEANKLFTMHVYTMGSSSYAKQVLKLIDPDKVYFGKRVITR--EASPFN- 158
Query: 1034 DERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSL 1093
KS DL + + VVI+DD+V VWP +K NL+ + +Y YF G S
Sbjct: 159 -----KSLDL--LAADKRRVVIVDDTVHVWPFHKRNLLQITKYIYFKVD----GTKWDSY 207
Query: 1094 LEIDHDERSEDGTLASSLGVRQQLH 1118
E DE +G+LA+ L + +H
Sbjct: 208 AEAKKDESQSNGSLANVLKFLEVVH 232
>TAIR|locus:2090467 [details] [associations]
symbol:AT3G17550 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 EMBL:AB022219 eggNOG:COG5190 TIGRFAMs:TIGR02250
HOGENOM:HOG000131609 ProtClustDB:CLSN2679395 IPI:IPI00520358
RefSeq:NP_188382.1 UniGene:At.65103 ProteinModelPortal:Q9LUP3
SMR:Q9LUP3 STRING:Q9LUP3 EnsemblPlants:AT3G17550.1 GeneID:821021
KEGG:ath:AT3G17550 TAIR:At3g17550 InParanoid:Q9LUP3 OMA:LVEINEY
PhylomeDB:Q9LUP3 Genevestigator:Q9LUP3 Uniprot:Q9LUP3
Length = 296
Score = 233 (87.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 56/146 (38%), Positives = 85/146 (58%)
Query: 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFD 1032
TKLRP + FL+ A++LF M++YTMG ++YA + K++DPK + F RVI+R D P+
Sbjct: 133 TKLRPFVHEFLKEANELFTMYVYTMGTRVYAESLLKLIDPKRIYFGDRVITR--DESPY- 189
Query: 1033 GDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPS 1092
K+ DL VL E VVI+DD+ VW H+K NL+ + Y +F + + S
Sbjct: 190 -----VKTLDL--VLAEERGVVIVDDTSDVWTHHKSNLVEINEYHFFRVNGPEES---NS 239
Query: 1093 LLEIDHDERSEDGTLASSLGVRQQLH 1118
E DE +G LA+ L + +++H
Sbjct: 240 YTEEKRDESKNNGGLANVLKLLKEVH 265
>TAIR|locus:2012943 [details] [associations]
symbol:AT1G20320 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
EMBL:CP002684 GO:GO:0005634 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0004721 TIGRFAMs:TIGR02250 EMBL:AC026234
HOGENOM:HOG000131609 IPI:IPI00518409 PIR:H86336 RefSeq:NP_173457.1
UniGene:At.41714 ProteinModelPortal:Q9LN24 SMR:Q9LN24 STRING:Q9LN24
EnsemblPlants:AT1G20320.1 GeneID:838620 KEGG:ath:AT1G20320
TAIR:At1g20320 InParanoid:Q9LN24 OMA:ACLNERK PhylomeDB:Q9LN24
ProtClustDB:CLSN2914672 Genevestigator:Q9LN24 Uniprot:Q9LN24
Length = 342
Score = 231 (86.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 59/150 (39%), Positives = 85/150 (56%)
Query: 971 MWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP 1030
M KLRP + FL+ A+++F M++YTMGN+ YA + K +DPK V F RVI+R + G
Sbjct: 120 MLIKLRPFVHEFLKEANEIFSMYVYTMGNRDYAQAVLKWIDPKKVYFGDRVITRDESG-- 177
Query: 1031 FDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFG--L 1088
F SK L+ VL E VVI+DD+ VWP ++ NL+ + +Y+YF R +
Sbjct: 178 F--------SKTLDLVLADECGVVIVDDTRHVWPDHERNLLQITKYSYF----RDYSHDK 225
Query: 1089 LGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
S E DE G+LA+ L V + +H
Sbjct: 226 ESKSYAEEKRDESRNQGSLANVLKVLKDVH 255
>TAIR|locus:4515103095 [details] [associations]
symbol:AT3G19595 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
GO:GO:0005634 EMBL:CP002686 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0004721 EMBL:AP000417 eggNOG:COG5190
TIGRFAMs:TIGR02250 IPI:IPI00895650 PIR:T52387 RefSeq:NP_001118664.1
UniGene:At.53390 UniGene:At.8134 ProteinModelPortal:Q9LJN7
STRING:Q9LJN7 DNASU:6241385 EnsemblPlants:AT3G19595.1
GeneID:6241385 KEGG:ath:AT3G19595 TAIR:At3g19595 PhylomeDB:Q9LJN7
ProtClustDB:CLSN2679395 Genevestigator:Q9LJN7 Uniprot:Q9LJN7
Length = 307
Score = 221 (82.9 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 53/150 (35%), Positives = 85/150 (56%)
Query: 969 MGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDG 1028
M TKLRP + FL+ A++ F M++YT G+++YA ++ +++DPK + F RVI++ +
Sbjct: 140 MEFLTKLRPFLRDFLKEANEFFTMYVYTKGSRVYAKQVLELIDPKKLYFGDRVITKTES- 198
Query: 1029 DPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL 1088
P K L+ VL E VVI+DD+ VWP +K NL+ + +Y+YF R G
Sbjct: 199 ---------PHMKTLDFVLAEERGVVIVDDTRNVWPDHKSNLVDISKYSYF----RLKGQ 245
Query: 1089 LGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
E DE +G LA+ L + +++H
Sbjct: 246 DSMPYSEEKTDESESEGGLANVLKLLKEVH 275
>TAIR|locus:2056256 [details] [associations]
symbol:AT2G02290 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 EMBL:AC005312 eggNOG:COG5190 TIGRFAMs:TIGR02250
HOGENOM:HOG000131609 UniGene:At.50476 ProtClustDB:CLSN2913195
IPI:IPI00547661 PIR:A84435 RefSeq:NP_178335.1 UniGene:At.52597
ProteinModelPortal:Q9ZVR2 STRING:Q9ZVR2 DNASU:814760
EnsemblPlants:AT2G02290.1 GeneID:814760 KEGG:ath:AT2G02290
TAIR:At2g02290 InParanoid:Q9ZVR2 OMA:ESPSRNC PhylomeDB:Q9ZVR2
ArrayExpress:Q9ZVR2 Genevestigator:Q9ZVR2 Uniprot:Q9ZVR2
Length = 302
Score = 199 (75.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 61/213 (28%), Positives = 97/213 (45%)
Query: 906 TRRLEEQKKMFSARKXXXXXXXXXXXXNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFR 965
T+RL Q +K ++ K ++ I +E + R+ R
Sbjct: 72 TKRLISQTSWLEDKKLHLVLDLDHTLVHTIKVSQLSESEKYIT--EEVESRKDLRRFNTG 129
Query: 966 FPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRG 1025
FP + KLR + FL+ +++F +++YT G YA + +++DP + F RVI+R
Sbjct: 130 FPEESL-IKLRSFVHQFLKECNEMFSLYVYTKGGYDYAQLVLEMIDPDKIYFGNRVITRR 188
Query: 1026 DDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQ 1085
+ P K L+ VL E +V++DD VWPH+K NL+ + RY YF Q
Sbjct: 189 ES----------PGFKTLDLVLADERGIVVVDDKSSVWPHDKKNLLQIARYKYFG---DQ 235
Query: 1086 FGLLGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
LL +ID E E G L ++L +H
Sbjct: 236 SCLLSECKKKID--ESDEKGPLNTALRFLMDVH 266
>TAIR|locus:2154458 [details] [associations]
symbol:AT5G23470 species:3702 "Arabidopsis thaliana"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 eggNOG:COG5190 TIGRFAMs:TIGR02250 EMBL:AB018110
HOGENOM:HOG000131609 IPI:IPI00541191 RefSeq:NP_197738.1
UniGene:At.50476 ProteinModelPortal:Q9FHL1 STRING:Q9FHL1
EnsemblPlants:AT5G23470.1 GeneID:832413 KEGG:ath:AT5G23470
TAIR:At5g23470 InParanoid:Q9FHL1 PhylomeDB:Q9FHL1
ProtClustDB:CLSN2913195 Genevestigator:Q9FHL1 Uniprot:Q9FHL1
Length = 302
Score = 198 (74.8 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 55/168 (32%), Positives = 85/168 (50%)
Query: 951 KEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVL 1010
+E + R+ R FP + KLRP + FL+ +++F M++YT G YA + +++
Sbjct: 115 EEVESRKDIKRFNTGFPEESL-IKLRPFVHQFLKECNEMFSMYVYTKGGYDYARLVLEMI 173
Query: 1011 DPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNL 1070
DP F RVI+R + P K L+ VL E +VI+DD+ VWPH+K NL
Sbjct: 174 DPDKFYFGNRVITRRES----------PGFKTLDLVLADERGIVIVDDTSSVWPHDKKNL 223
Query: 1071 IVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
+ + RY YF + L +ID E E G L ++L + +H
Sbjct: 224 LQIARYKYFG---DKSCLFSEDKKKID--ESDEKGPLNTALRFLKDVH 266
>POMBASE|SPAC19B12.05c [details] [associations]
symbol:fcp1 "CTD phosphatase Fcp1" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;IPI] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006470 "protein dephosphorylation" evidence=IDA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0008420 "CTD phosphatase activity" evidence=IDA]
[GO:0043623 "cellular protein complex assembly" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070317 "negative
regulation of G0 to G1 transition" evidence=IMP] [GO:0071775
"regulation of cell cycle cytokinesis" evidence=IMP]
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 PomBase:SPAC19B12.05c
GO:GO:0005634 EMBL:CU329670 GO:GO:0070317 GO:GO:0006470
GenomeReviews:CU329670_GR GO:GO:0071775 GO:GO:0046872
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0006357 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0006995 GO:GO:0043623 eggNOG:COG5190 TIGRFAMs:TIGR02250
KO:K15732 GO:GO:0008420 RefSeq:NP_594768.1 PDB:3EF0 PDB:3EF1
PDBsum:3EF0 PDBsum:3EF1 ProteinModelPortal:Q9P376 MINT:MINT-1213896
STRING:Q9P376 EnsemblFungi:SPAC19B12.05c.1 GeneID:2542225
KEGG:spo:SPAC19B12.05c HOGENOM:HOG000197682 OMA:LYEMHIY
OrthoDB:EOG4WDHMJ EvolutionaryTrace:Q9P376 NextBio:20803293
Uniprot:Q9P376
Length = 723
Score = 206 (77.6 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 48/109 (44%), Positives = 64/109 (58%)
Query: 972 WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPF 1031
+ K RPG+ FL++ S+L+E+H+YTMG K YA E+AK++DP G LF RV+SR D G
Sbjct: 219 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL- 277
Query: 1032 DGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYF 1079
K L + + S VV+IDD VW N NLI V Y +F
Sbjct: 278 -------AQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYEFF 318
Score = 41 (19.5 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 161 EKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCS 198
E V VK+E + N I L ++++ G+C+
Sbjct: 73 ELVEWAVKKEESIENFSKIVAKLHEPCTHEVNYGGLCA 110
>MGI|MGI:1926953 [details] [associations]
symbol:Ctdp1 "CTD (carboxy-terminal domain, RNA polymerase
II, polypeptide A) phosphatase, subunit 1" species:10090 "Mus
musculus" [GO:0000922 "spindle pole" evidence=ISO] [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005819 "spindle" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006470 "protein
dephosphorylation" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008420 "CTD
phosphatase activity" evidence=ISO] [GO:0010458 "exit from mitosis"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030496 "midbody" evidence=ISO] [GO:0051233 "spindle midzone"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 MGI:MGI:1926953 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0006470 GO:GO:0051301
GO:GO:0007067 GO:GO:0010458 GO:GO:0015629 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 GO:GO:0051233 GO:GO:0030496
GO:GO:0000922 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
eggNOG:COG5190 TIGRFAMs:TIGR02250 CTD:9150 HOGENOM:HOG000112039
HOVERGEN:HBG051213 KO:K15732 OMA:EAPDIRK OrthoDB:EOG4HMJ8T
GO:GO:0008420 InterPro:IPR015388 Pfam:PF09309 EMBL:AK016213
EMBL:BC052934 EMBL:BC053435 IPI:IPI00338904 IPI:IPI00411156
RefSeq:NP_080571.2 UniGene:Mm.312893 ProteinModelPortal:Q7TSG2
SMR:Q7TSG2 STRING:Q7TSG2 PhosphoSite:Q7TSG2 PaxDb:Q7TSG2
PRIDE:Q7TSG2 Ensembl:ENSMUST00000036229 GeneID:67655 KEGG:mmu:67655
UCSC:uc008ftb.1 GeneTree:ENSGT00390000015641 InParanoid:Q7TSG2
NextBio:325156 Bgee:Q7TSG2 Genevestigator:Q7TSG2
GermOnline:ENSMUSG00000033323 Uniprot:Q7TSG2
Length = 960
Score = 199 (75.1 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 50/122 (40%), Positives = 72/122 (59%)
Query: 960 HRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAG 1019
H L R M + T+LRP FLE+ +KL+E+H++T G++LYA +A LDP+ LF+
Sbjct: 211 HFQLGRGEPM-LHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSH 269
Query: 1020 RVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRVWPHNKLNLIVVERYTY 1078
R++SR + DPF K+ +L + +S V IIDD VW NLI V++Y Y
Sbjct: 270 RILSRDECIDPFS------KTGNLRNLFPCGDSMVCIIDDREDVWKFAP-NLITVKKYVY 322
Query: 1079 FP 1080
FP
Sbjct: 323 FP 324
>UNIPROTKB|G4N817 [details] [associations]
symbol:MGG_03485 "RNA polymerase II subunit A domain
phosphatase" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
InterPro:IPR001357 GO:GO:0005634 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 GO:GO:0004721 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:CM001234 TIGRFAMs:TIGR02250
KO:K15732 RefSeq:XP_003716438.1 ProteinModelPortal:G4N817
EnsemblFungi:MGG_03485T0 GeneID:2676442 KEGG:mgr:MGG_03485
Uniprot:G4N817
Length = 866
Score = 196 (74.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 60/193 (31%), Positives = 89/193 (46%)
Query: 895 DQQKAAIQKERTRR--LEEQKKMFSARKXXXXXXXXXXXXNSAKFHEV-----DPVHDEI 947
D I ++ R LE QK++ + RK +A + DP +
Sbjct: 143 DNTGLLISRDAAARTDLEMQKRLVAQRKLVLVVDLDQTVIQTACEPTIGEWQKDPSNPNY 202
Query: 948 LRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMA 1007
KE + E P R + + K RPG FL + S LFEMH+YTM + YA +
Sbjct: 203 EALKEVRSFELPSEDGPRRNYT-YYVKCRPGTHEFLNKVSNLFEMHVYTMATRAYAEHIL 261
Query: 1008 KVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVV-IIDDSVRVWPHN 1066
+++DPK LF RVISR ++ G E K L+ + + +V +IDD VWP N
Sbjct: 262 RIIDPKKNLFGNRVISRNEN----KGIE-----KTLQRIFPTSTKMVAVIDDRTDVWPQN 312
Query: 1067 KLNLIVVERYTYF 1079
+ N+I V Y ++
Sbjct: 313 RSNVIKVVPYNFY 325
>ZFIN|ZDB-GENE-040720-1 [details] [associations]
symbol:ctdp1 "CTD (carboxy-terminal domain, RNA
polymerase II, polypeptide A) phosphatase, subunit 1" species:7955
"Danio rerio" [GO:0004721 "phosphoprotein phosphatase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 ZFIN:ZDB-GENE-040720-1
GO:GO:0005634 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 InterPro:IPR011053 SUPFAM:SSF51230 GO:GO:0004721
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 TIGRFAMs:TIGR02250
InterPro:IPR015388 Pfam:PF09309 GeneTree:ENSGT00390000015641
EMBL:CU467825 EMBL:CR548625 EMBL:CR759771 IPI:IPI00933139
ProteinModelPortal:E7FFL3 Ensembl:ENSDART00000111517 Bgee:E7FFL3
Uniprot:E7FFL3
Length = 951
Score = 195 (73.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 50/139 (35%), Positives = 79/139 (56%)
Query: 947 ILRKKEEQDREKPHRHLFRFPHMG-----MWTKLRPGIWTFLERASKLFEMHLYTMGNKL 1001
++ E+ + ++ +F F +G + T+LRP FLE+ +KLFE+H++T G++L
Sbjct: 180 LIHTTEQHCQRMSNKGIFHF-QLGRGEPMLHTRLRPHCKDFLEKIAKLFELHVFTFGSRL 238
Query: 1002 YATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSV 1060
YA +A LDP+ LF+ R++SR + DPF K+ +L + +S V IIDD
Sbjct: 239 YAHTIAGFLDPEKKLFSHRILSRDECIDPFS------KTGNLRNLFPCGDSMVCIIDDRE 292
Query: 1061 RVWPHNKLNLIVVERYTYF 1079
VW NLI V++Y YF
Sbjct: 293 DVWKFAP-NLITVKKYIYF 310
>DICTYBASE|DDB_G0271690 [details] [associations]
symbol:DDB_G0271690 "putative RNA polymerase II
C-terminal domain phosphatase" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IEA] [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA]
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 dictyBase:DDB_G0271690
Pfam:PF00533 GO:GO:0005634 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 EMBL:AAFI02000006 GO:GO:0004721 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 eggNOG:COG5190 TIGRFAMs:TIGR02250
KO:K15732 OMA:TCAERWE RefSeq:XP_645475.1 ProteinModelPortal:Q75JA4
STRING:Q75JA4 EnsemblProtists:DDB0168463 GeneID:8618103
KEGG:ddi:DDB_G0271690 InParanoid:Q75JA4 Uniprot:Q75JA4
Length = 782
Score = 188 (71.2 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 45/131 (34%), Positives = 74/131 (56%)
Query: 950 KKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKV 1009
+ +++++ H P M K RP + FL +K++E+H+YTMG + YA E+AK+
Sbjct: 162 RNKDKNKNGIHTITVNGP-MNYCIKKRPHLVKFLTEVNKIYELHIYTMGTRNYANEIAKL 220
Query: 1010 LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKL 1068
+DP+ +F R++SR DDG+ + K L+ + + S V+I+DD VW +K
Sbjct: 221 IDPESSIFKERILSR-DDGNGIN-------FKSLQRLFPCDDSMVLIVDDRSDVWKKSK- 271
Query: 1069 NLIVVERYTYF 1079
NLI + Y YF
Sbjct: 272 NLIQISPYVYF 282
>UNIPROTKB|D4A8R2 [details] [associations]
symbol:Ctdp1 "Protein Ctdp1" species:10116 "Rattus
norvegicus" [GO:0004721 "phosphoprotein phosphatase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 RGD:1311755 GO:GO:0005634
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
TIGRFAMs:TIGR02250 InterPro:IPR015388 Pfam:PF09309 IPI:IPI00869611
ProteinModelPortal:D4A8R2 Ensembl:ENSRNOT00000029123
ArrayExpress:D4A8R2 Uniprot:D4A8R2
Length = 955
Score = 199 (75.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 50/122 (40%), Positives = 72/122 (59%)
Query: 960 HRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAG 1019
H L R M + T+LRP FLE+ +KL+E+H++T G++LYA +A LDP+ LF+
Sbjct: 211 HFQLGRGEPM-LHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSH 269
Query: 1020 RVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRVWPHNKLNLIVVERYTY 1078
R++SR + DPF K+ +L + +S V IIDD VW NLI V++Y Y
Sbjct: 270 RILSRDECIDPFS------KTGNLRNLFPCGDSMVCIIDDREDVWKFAP-NLITVKKYVY 322
Query: 1079 FP 1080
FP
Sbjct: 323 FP 324
Score = 37 (18.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 191 ISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFS 228
+ +G+C++ L L+ + VP A + + S
Sbjct: 118 VVMKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHS 155
>UNIPROTKB|F1NZN8 [details] [associations]
symbol:CTDP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0008420
"CTD phosphatase activity" evidence=IEA] [GO:0010458 "exit from
mitosis" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0051233
"spindle midzone" evidence=IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
InterPro:IPR001357 GO:GO:0005634 GO:GO:0015629 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 TIGRFAMs:TIGR02250 OMA:EAPDIRK GO:GO:0008420
InterPro:IPR015388 Pfam:PF09309 GeneTree:ENSGT00390000015641
EMBL:AADN02027379 IPI:IPI00572672 Ensembl:ENSGALT00000020647
Uniprot:F1NZN8
Length = 801
Score = 189 (71.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 50/139 (35%), Positives = 81/139 (58%)
Query: 947 ILRKKEEQDREKPHRHLFRFPHMG-----MWTKLRPGIWTFLERASKLFEMHLYTMGNKL 1001
++ E+ ++ ++ +F F +G + T+LRP FLE+ +KL+E+H++T G++L
Sbjct: 162 LIHTTEQHCQQMSNKGIFHF-QLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVFTFGSRL 220
Query: 1002 YATEMAK-VLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSV 1060
YA +A+ LDP+ LF+ R++SR + DPF + +DL G +S V IIDD
Sbjct: 221 YAHTIAEGFLDPEKKLFSHRILSRDECIDPFS---KTGNLRDLFPC-G-DSMVCIIDDRE 275
Query: 1061 RVWPHNKLNLIVVERYTYF 1079
VW NLI V++Y YF
Sbjct: 276 DVWKFAP-NLITVKKYVYF 293
Score = 45 (20.9 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 191 ISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFS 228
+ +G+C++ L +R + NVP A + + S
Sbjct: 87 VVMKGLCAECGQDLTQIRSKNGKQNVPLSTATVSMVHS 124
>ASPGD|ASPL0000035800 [details] [associations]
symbol:podH species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008420 "CTD phosphatase
activity" evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0071775 "regulation of cell cycle
cytokinesis" evidence=IEA] [GO:0043623 "cellular protein complex
assembly" evidence=IEA] InterPro:IPR004274 InterPro:IPR011947
Pfam:PF03031 PROSITE:PS50969 SMART:SM00577 InterPro:IPR001357
GO:GO:0005634 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0004721
SUPFAM:SSF52113 PROSITE:PS50172 eggNOG:COG5190 TIGRFAMs:TIGR02250
KO:K15732 HOGENOM:HOG000197682 OrthoDB:EOG4WDHMJ RefSeq:XP_660506.1
ProteinModelPortal:Q5B978 STRING:Q5B978
EnsemblFungi:CADANIAT00010187 GeneID:2873891 KEGG:ani:AN2902.2
OMA:TCAERWE Uniprot:Q5B978
Length = 829
Score = 183 (69.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 58/196 (29%), Positives = 93/196 (47%)
Query: 895 DQQKAAIQKERTRRLEE--QKKMFSARKXXXXXXXXXXXXNSAKFHEVDPVHDEILRKKE 952
D + + R+EE ++++ + RK ++A VDP E + K+
Sbjct: 132 DNTALTVSEREAIRVEEDAKRRLLANRKLSLVVDLDQTIIHAA----VDPTIGEWMADKD 187
Query: 953 EQDREKPHR-HLFRF----PHM-GMW--TKLRPGIWTFLERASKLFEMHLYTMGNKLYAT 1004
+ F+ P M G W KLRPG+ FLE ++++E+H+YTMG + YA
Sbjct: 188 NPNHAAVSDVRAFQLVDDGPGMRGCWYYVKLRPGLEEFLENVAEMYELHIYTMGTRSYAQ 247
Query: 1005 EMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESA-VVIIDDSVRVW 1063
+A ++DP LF R++SR + G K+L + +++ VVIIDD VW
Sbjct: 248 AIANIIDPDRKLFGDRILSRDESGSL--------SVKNLHRIFPVDTKMVVIIDDRGDVW 299
Query: 1064 PHNKLNLIVVERYTYF 1079
+ NLI V Y +F
Sbjct: 300 RWSP-NLIKVIPYDFF 314
>CGD|CAL0004856 [details] [associations]
symbol:orf19.6742 species:5476 "Candida albicans" [GO:0008420
"CTD phosphatase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0070940 "dephosphorylation of RNA polymerase II
C-terminal domain" evidence=IEA] [GO:0070317 "negative regulation
of G0 to G1 transition" evidence=IEA] [GO:0071775 "regulation of
cell cycle cytokinesis" evidence=IEA] [GO:0043623 "cellular protein
complex assembly" evidence=IEA] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
InterPro:IPR001357 CGD:CAL0004856 GO:GO:0005634 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 GO:GO:0004721 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 eggNOG:COG5190 TIGRFAMs:TIGR02250
KO:K15732 EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719723.1
RefSeq:XP_719840.1 ProteinModelPortal:Q5ADU9 STRING:Q5ADU9
GeneID:3638480 GeneID:3638577 KEGG:cal:CaO19.14034
KEGG:cal:CaO19.6742 Uniprot:Q5ADU9
Length = 768
Score = 182 (69.1 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 43/109 (39%), Positives = 63/109 (57%)
Query: 972 WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPF 1031
+ KLRPG+ FLE+ ++ +EMH+YTM + YA +AK++DP G F R++SR + G
Sbjct: 231 YVKLRPGLSEFLEKMAEKYEMHIYTMATRNYALSIAKIIDPDGKYFGDRILSRDESGSL- 289
Query: 1032 DGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYF 1079
K+L+ + ++ S VVIIDD VW NLI V Y +F
Sbjct: 290 -------THKNLKRLFPVDQSMVVIIDDRGDVWQWES-NLIKVVPYDFF 330
>UNIPROTKB|K7EJD2 [details] [associations]
symbol:CTDP1 "RNA polymerase II subunit A C-terminal domain
phosphatase" species:9606 "Homo sapiens" [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR004274 InterPro:IPR011947
Pfam:PF03031 PROSITE:PS50969 SMART:SM00577 InterPro:IPR001357
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 TIGRFAMs:TIGR02250
EMBL:AC021594 EMBL:AC068473 HGNC:HGNC:2498 InterPro:IPR015388
Pfam:PF09309 Ensembl:ENST00000591598 Uniprot:K7EJD2
Length = 799
Score = 195 (73.7 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 49/139 (35%), Positives = 80/139 (57%)
Query: 947 ILRKKEEQDREKPHRHLFRFPHMG-----MWTKLRPGIWTFLERASKLFEMHLYTMGNKL 1001
++ E+ ++ ++ +F F +G + T+LRP FLE+ +KL+E+H++T G++L
Sbjct: 125 LIHTTEQHCQQMSNKGIFHF-QLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRL 183
Query: 1002 YATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSV 1060
YA +A LDP+ LF+ R++SR + DPF K+ +L + +S V IIDD
Sbjct: 184 YAHTIAGFLDPEKKLFSHRILSRDECIDPFS------KTGNLRNLFPCGDSMVCIIDDRE 237
Query: 1061 RVWPHNKLNLIVVERYTYF 1079
VW NLI V++Y YF
Sbjct: 238 DVWKFAP-NLITVKKYVYF 255
Score = 37 (18.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 191 ISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFS 228
+ +G+C++ L L+ + VP A + + S
Sbjct: 50 VVMKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHS 87
>UNIPROTKB|Q9Y5B0 [details] [associations]
symbol:CTDP1 "RNA polymerase II subunit A C-terminal domain
phosphatase" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0008420 "CTD phosphatase activity"
evidence=IDA] [GO:0006470 "protein dephosphorylation" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA] [GO:0051233
"spindle midzone" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
[GO:0010458 "exit from mitosis" evidence=IMP] [GO:0003899
"DNA-directed RNA polymerase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0050434 "positive regulation of
viral transcription" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] Reactome:REACT_71
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 GO:GO:0005737 GO:GO:0005813
Reactome:REACT_116125 GO:GO:0005654 GO:GO:0016032 GO:GO:0006470
GO:GO:0051301 GO:GO:0007067 GO:GO:0010458 GO:GO:0015629
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0051233 EMBL:CH471117 GO:GO:0006368 GO:GO:0030496
GO:GO:0000922 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
Reactome:REACT_1788 GO:GO:0050434 Reactome:REACT_1892
eggNOG:COG5190 TIGRFAMs:TIGR02250 EMBL:AF081287 EMBL:AF154115
EMBL:AC021594 EMBL:AC068473 EMBL:BC015010 EMBL:BC052576
EMBL:BC063447 IPI:IPI00410256 IPI:IPI00410257 IPI:IPI00410258
IPI:IPI01008810 RefSeq:NP_001189433.1 RefSeq:NP_004706.3
RefSeq:NP_430255.2 UniGene:Hs.465490 UniGene:Hs.734021 PDB:1J2X
PDB:1ONV PDB:2K7L PDBsum:1J2X PDBsum:1ONV PDBsum:2K7L
DisProt:DP00177 ProteinModelPortal:Q9Y5B0 SMR:Q9Y5B0 DIP:DIP-41788N
IntAct:Q9Y5B0 MINT:MINT-275991 STRING:Q9Y5B0 PhosphoSite:Q9Y5B0
DMDM:46396052 PaxDb:Q9Y5B0 PRIDE:Q9Y5B0 DNASU:9150
Ensembl:ENST00000075430 Ensembl:ENST00000299543 GeneID:9150
KEGG:hsa:9150 UCSC:uc002lnh.2 UCSC:uc002lni.2 CTD:9150
GeneCards:GC18P077494 HGNC:HGNC:2498 HPA:CAB032641 HPA:HPA040394
MIM:604168 MIM:604927 neXtProt:NX_Q9Y5B0 Orphanet:48431
PharmGKB:PA27001 HOGENOM:HOG000112039 HOVERGEN:HBG051213
InParanoid:Q9Y5B0 KO:K15732 OMA:EAPDIRK OrthoDB:EOG4HMJ8T
PhylomeDB:Q9Y5B0 ChiTaRS:CTDP1 EvolutionaryTrace:Q9Y5B0
GenomeRNAi:9150 NextBio:34327 Bgee:Q9Y5B0 CleanEx:HS_CTDP1
Genevestigator:Q9Y5B0 GermOnline:ENSG00000060069 GO:GO:0008420
GO:GO:0003899 InterPro:IPR015388 Pfam:PF09309 Uniprot:Q9Y5B0
Length = 961
Score = 195 (73.7 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 49/139 (35%), Positives = 80/139 (57%)
Query: 947 ILRKKEEQDREKPHRHLFRFPHMG-----MWTKLRPGIWTFLERASKLFEMHLYTMGNKL 1001
++ E+ ++ ++ +F F +G + T+LRP FLE+ +KL+E+H++T G++L
Sbjct: 193 LIHTTEQHCQQMSNKGIFHF-QLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRL 251
Query: 1002 YATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSV 1060
YA +A LDP+ LF+ R++SR + DPF K+ +L + +S V IIDD
Sbjct: 252 YAHTIAGFLDPEKKLFSHRILSRDECIDPFS------KTGNLRNLFPCGDSMVCIIDDRE 305
Query: 1061 RVWPHNKLNLIVVERYTYF 1079
VW NLI V++Y YF
Sbjct: 306 DVWKFAP-NLITVKKYVYF 323
Score = 37 (18.1 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 191 ISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFS 228
+ +G+C++ L L+ + VP A + + S
Sbjct: 118 VVMKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHS 155
>FB|FBgn0035026 [details] [associations]
symbol:Fcp1 species:7227 "Drosophila melanogaster"
[GO:0008420 "CTD phosphatase activity" evidence=ISS] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 GO:GO:0005634 GO:GO:0022008
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 GO:GO:0005700 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 eggNOG:COG5190 TIGRFAMs:TIGR02250 EMBL:AY122238
ProteinModelPortal:Q8MQY2 STRING:Q8MQY2 PaxDb:Q8MQY2 PRIDE:Q8MQY2
FlyBase:FBgn0035026 InParanoid:Q8MQY2 OrthoDB:EOG4TQJQX
ArrayExpress:Q8MQY2 Bgee:Q8MQY2 Uniprot:Q8MQY2
Length = 896
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 47/121 (38%), Positives = 69/121 (57%)
Query: 960 HRHLFRFPHMGMW-TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA 1018
H L+ PH + T+LRPG FLER S+L+E+H+ T G + YA +A++LDP+G F+
Sbjct: 251 HFQLYG-PHSPWYHTRLRPGTAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFFS 309
Query: 1019 GRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTY 1078
R++SR + F+ + K L +S V IIDD VW + NLI V+ Y +
Sbjct: 310 HRILSRDEC---FNATSKTDNLKAL--FPNGDSMVCIIDDREDVW-NMASNLIQVKPYHF 363
Query: 1079 F 1079
F
Sbjct: 364 F 364
>UNIPROTKB|E2R1Y2 [details] [associations]
symbol:CTDP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA]
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 GO:GO:0005634 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 InterPro:IPR011053
SUPFAM:SSF51230 GO:GO:0004721 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 TIGRFAMs:TIGR02250 CTD:9150 KO:K15732 OMA:EAPDIRK
InterPro:IPR015388 Pfam:PF09309 GeneTree:ENSGT00390000015641
EMBL:AAEX03000016 RefSeq:XP_533365.2 Ensembl:ENSCAFT00000000012
GeneID:476158 KEGG:cfa:476158 Uniprot:E2R1Y2
Length = 933
Score = 189 (71.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 47/139 (33%), Positives = 80/139 (57%)
Query: 947 ILRKKEEQDREKPHRHLFRFPHMG-----MWTKLRPGIWTFLERASKLFEMHLYTMGNKL 1001
++ E+ ++ ++ +F F +G + T++RP FLE+ ++L+E+H++T G++L
Sbjct: 190 LIHTTEQHCQQMSNKGIFHF-QLGRGEPMLHTRVRPHCREFLEKIARLYELHVFTFGSRL 248
Query: 1002 YATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSV 1060
YA +A LDP+ LF+ R++SR + DPF K+ +L + +S V IIDD
Sbjct: 249 YAHTIAGFLDPEKKLFSHRILSRDECIDPFS------KTGNLRNLFPCGDSMVCIIDDRE 302
Query: 1061 RVWPHNKLNLIVVERYTYF 1079
VW NLI V++Y YF
Sbjct: 303 DVWKFAP-NLITVKKYVYF 320
Score = 38 (18.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 191 ISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFS 228
+ +G+C++ L L+ + VP A + + S
Sbjct: 115 VVMKGLCAECGQDLTQLQSKNGQQQVPLSTATVSMVHS 152
>SGD|S000004890 [details] [associations]
symbol:FCP1 "Carboxy-terminal domain (CTD) phosphatase"
species:4932 "Saccharomyces cerevisiae" [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IPI] [GO:0004722 "protein serine/threonine phosphatase
activity" evidence=IMP;IDA] [GO:0070940 "dephosphorylation of RNA
polymerase II C-terminal domain" evidence=IMP;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR004274 InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969
SMART:SM00577 InterPro:IPR001357 SGD:S000004890 Pfam:PF00533
GO:GO:0005634 GO:GO:0004722 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 EMBL:BK006946 EMBL:Z49704 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 eggNOG:COG5190 TIGRFAMs:TIGR02250
KO:K15732 GeneTree:ENSGT00390000015641 HOGENOM:HOG000197682
OMA:LYEMHIY OrthoDB:EOG4WDHMJ PIR:S54584 RefSeq:NP_014004.1
ProteinModelPortal:Q03254 SMR:Q03254 DIP:DIP-2330N IntAct:Q03254
MINT:MINT-501044 STRING:Q03254 PaxDb:Q03254 PeptideAtlas:Q03254
EnsemblFungi:YMR277W GeneID:855320 KEGG:sce:YMR277W CYGD:YMR277w
NextBio:979023 Genevestigator:Q03254 GermOnline:YMR277W
GO:GO:0070940 Uniprot:Q03254
Length = 732
Score = 178 (67.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 42/109 (38%), Positives = 62/109 (56%)
Query: 972 WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPF 1031
+ K+RPG+ F + + LFEMH+YTM + YA ++AK++DP G LF R++SR ++G
Sbjct: 246 YVKVRPGLKEFFAKVAPLFEMHIYTMATRAYALQIAKIVDPTGELFGDRILSRDENGSL- 304
Query: 1032 DGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYF 1079
+K L + + S VV+IDD VW NLI V Y +F
Sbjct: 305 -------TTKSLAKLFPTDQSMVVVIDDRGDVWNWCP-NLIKVVPYNFF 345
Score = 37 (18.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 853 KAVVTNHDDKQTGTGSGPEAGPVGAHP 879
+A T DD + G AG G P
Sbjct: 45 RASDTGDDDNEHDVSPGGSAGSNGVSP 71
>TAIR|locus:2143019 [details] [associations]
symbol:SSP5 "SCP1-like small phosphatase 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016791 "phosphatase activity" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IDA] [GO:0005694
"chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006470 "protein dephosphorylation" evidence=IDA] [GO:0008420
"CTD phosphatase activity" evidence=IDA] [GO:0006914 "autophagy"
evidence=RCA] InterPro:IPR004274 InterPro:IPR011948 Pfam:PF03031
PROSITE:PS50969 SMART:SM00577 GO:GO:0005634 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000775 GO:GO:0006470
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
eggNOG:COG5190 TIGRFAMs:TIGR02251 HOGENOM:HOG000236379
GO:GO:0008420 EMBL:AL163812 EMBL:AY085441 EMBL:BT020406
IPI:IPI00517368 PIR:T48545 RefSeq:NP_001078572.1 RefSeq:NP_196747.1
RefSeq:NP_850809.1 RefSeq:NP_974767.1 UniGene:At.49009
ProteinModelPortal:Q9LYI7 SMR:Q9LYI7 PaxDb:Q9LYI7 PRIDE:Q9LYI7
DNASU:831059 EnsemblPlants:AT5G11860.1 EnsemblPlants:AT5G11860.2
EnsemblPlants:AT5G11860.3 EnsemblPlants:AT5G11860.4 GeneID:831059
KEGG:ath:AT5G11860 TAIR:At5g11860 InParanoid:Q9LYI7 OMA:QVFVRTR
PhylomeDB:Q9LYI7 ProtClustDB:CLSN2686802 Genevestigator:Q9LYI7
Uniprot:Q9LYI7
Length = 305
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 49/153 (32%), Positives = 80/153 (52%)
Query: 968 HMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDD 1027
HM ++ + RP + F+ER S+LFE+ ++T +YA ++ VLDPK LF RV D
Sbjct: 146 HM-VYVRCRPHLKEFMERVSRLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVYR--DS 202
Query: 1028 GDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQF 1086
FDG+ KDL VLG + S V+I+D+S + + N + +E + P +
Sbjct: 203 CVFFDGNYL----KDLS-VLGRDLSRVIIVDNSPQAFGFQVENGVPIESWFNDPSDKELL 257
Query: 1087 GLLG--PSLLEIDHDERSEDGTLASSLGVRQQL 1117
LL SL+ ++ D R +A +R+++
Sbjct: 258 HLLPFLESLIGVE-DVRP---MIAKKFNLREKI 286
>WB|WBGene00009479 [details] [associations]
symbol:fcp-1 species:6239 "Caenorhabditis elegans"
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR004274
InterPro:IPR011947 Pfam:PF03031 PROSITE:PS50969 SMART:SM00577
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 GO:GO:0009792
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0004721 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
eggNOG:COG5190 TIGRFAMs:TIGR02250 KO:K15732
GeneTree:ENSGT00390000015641 EMBL:Z81532 RefSeq:NP_492423.2
ProteinModelPortal:Q95QG8 SMR:Q95QG8 STRING:Q95QG8 PaxDb:Q95QG8
EnsemblMetazoa:F36F2.6 GeneID:172719 KEGG:cel:CELE_F36F2.6
UCSC:F36F2.6 CTD:172719 WormBase:F36F2.6 HOGENOM:HOG000019648
InParanoid:Q95QG8 OMA:RTDIYRL NextBio:876723 Uniprot:Q95QG8
Length = 659
Score = 163 (62.4 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 43/128 (33%), Positives = 72/128 (56%)
Query: 955 DREKPHRHLFRFP-HMGMWT-KLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDP 1012
D E H+ + ++ H ++T KLRP FL + S ++EMH+ T G + YA +A++LDP
Sbjct: 165 DTEN-HKDITKYNLHSRVYTTKLRPHTTEFLNKMSNMYEMHIVTYGQRQYAHRIAQILDP 223
Query: 1013 KGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRVWPHNKLNLI 1071
LF R++SR + F K+ +L+ + ++ VVIIDD VW +++ LI
Sbjct: 224 DARLFEQRILSRDE---LFSAQH---KTNNLKALFPCGDNLVVIIDDRSDVWMYSEA-LI 276
Query: 1072 VVERYTYF 1079
++ Y +F
Sbjct: 277 QIKPYRFF 284
Score = 37 (18.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 766 EFKTDGPSAPCTQGSKE 782
+ K +G A CT G K+
Sbjct: 2 DIKFEGNDAECTAGLKK 18
>UNIPROTKB|E2QVP8 [details] [associations]
symbol:CTDSPL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016791 "phosphatase activity"
evidence=IEA] InterPro:IPR004274 InterPro:IPR011948 Pfam:PF03031
PROSITE:PS50969 SMART:SM00577 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 GO:GO:0016311 GO:GO:0016791
TIGRFAMs:TIGR02251 ProteinModelPortal:E2QVP8
Ensembl:ENSCAFT00000021489 Uniprot:E2QVP8
Length = 466
Score = 123 (48.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 971 MWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP 1030
++ +LRP FLER S+++E+ L+T K+YA ++ +LDPK LF R+ +
Sbjct: 324 VYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLFRHRLFR--EHCVC 381
Query: 1031 FDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLL 1089
G+ KDL +LG + S +IID+S + + + N I +E + + + + L
Sbjct: 382 VQGNY----IKDLN-ILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW-FMDKNDNELLKL 435
Query: 1090 GP---SLLEIDHDER 1101
P L+E++ D R
Sbjct: 436 IPFLEKLVELNEDVR 450
Score = 46 (21.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 18/94 (19%), Positives = 40/94 (42%)
Query: 801 QSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPIQPG-QIKSGADMKAVVTNH 859
Q+V +I +Q +++ + D ++ S ++ N +Q I +G + N
Sbjct: 168 QAVEAEEIVKQL--DMEQV-DEITTSTTTSTNGAAYSNQAVQVRPSINNGLEEAEETVNR 224
Query: 860 DDKQTGTGSGPEAGPVGAHPQSAWGDVEHLFEGY 893
D P++G AH ++ + + +F+ Y
Sbjct: 225 DIPPLTAPVTPDSGYSSAHAEATYEEDWEVFDPY 258
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1118 943 0.00093 122 3 11 23 0.46 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 622 (66 KB)
Total size of DFA: 418 KB (2200 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 89.59u 0.09s 89.68t Elapsed: 00:00:04
Total cpu time: 89.59u 0.09s 89.68t Elapsed: 00:00:04
Start: Fri May 10 23:11:54 2013 End: Fri May 10 23:11:58 2013