BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001231
(1118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LL04|CPL3_ARATH RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis
thaliana GN=CPL3 PE=1 SV=2
Length = 1241
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/1135 (46%), Positives = 668/1135 (58%), Gaps = 156/1135 (13%)
Query: 52 VWTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDDVSKRSSPASSVA 111
VWTM +L ++YPA GL NLAWA+AVQNKP NE VM+ E P S
Sbjct: 79 VWTMEELISQYPAYRPYANSGLSNLAWARAVQNKPFNEGLVMDYE---------PRES-- 127
Query: 112 SVNSGAAAGKDDKKVVEKVVIDDSGDE----------IEKEEGELEEGEIELDLESE--- 158
+K+VI+DS DE I+ + ++ +E D ES
Sbjct: 128 ----------------DKIVIEDSDDEKEEGELEEGEIDLVDNASDDNLVEKDTESVVLI 171
Query: 159 SNEKVSEQ--VKEEMKLINVESIREALES--VLRGDISFEGVCSKLEFTLESLRELVNEN 214
S +KV + +KE V+ IR LES ++ FEGVCS++ LESLRELV++N
Sbjct: 172 SADKVEDDRILKERDLEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGALESLRELVSDN 231
Query: 215 N-VPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSLIKSHEPPLFSSNQIK 273
+ P +D L+QL+F+++Q+++ VFCSMN++ KE+NKE +SRLL+L+ H S NQ
Sbjct: 232 DDFPKRDTLVQLSFASLQTINYVFCSMNNISKERNKETMSRLLTLVNDHFSQFLSFNQKN 291
Query: 274 EMEAMLSSLVTRANDKEKDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPLPVDSLMQNK- 332
E+E M D + +A+ + N VN + P DS + K
Sbjct: 292 EIETM-------NQDLSRSAIAVFAGTSSEEN------VNQMT----QPSNGDSFLAKKL 334
Query: 333 PLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGMVKSW 392
E++ G RSR +LPLLD HK HD DSLPSPTRETTPS+PV MV+
Sbjct: 335 TSESTHRGAAYLRSRLPMLPLLDLHKDHDADSLPSPTRETTPSLPVNGR----HTMVRPG 390
Query: 393 AAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDT 452
+ S E K YE+DA +A S+YQQKFG NS F +LPSPTPS E DG+GD
Sbjct: 391 FPVGRESQTTEGAKVYSYESDARKAVSTYQQKFGLNSVFKTDDLPSPTPSGEPNDGNGDV 450
Query: 453 GGEISSATAV------------DQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTA 500
GGE+SS+ D P P N + PV++ P +S + A+
Sbjct: 451 GGEVSSSVVKSSNPGSHLIYGQDVPLPSNFNSRSM-PVANSVSSTVPPHHLS-IHAI--- 505
Query: 501 NNSAPASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNALNLN--HQPAPILHNAPKVEPV 558
SAP +S + VK KSRDPRLR A +A N+ + N KVE
Sbjct: 506 --SAPTAS--------DQTVKPSAKSRDPRLRLAKPDAANVTIYSYSSGDARNLSKVELS 555
Query: 559 GRVMSSRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMN 618
+++ RKQK +E ++DGPA KRQ++ D G+GGWLEDT+ +
Sbjct: 556 ADLVNPRKQKAADEFLIDGPAWKRQKSD-------TDAPKAAGTGGWLEDTE-------S 601
Query: 619 RNLLVDSAESNSRKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKDIAVNP 678
LL ES R ++NG TS +S P VS ++ T + T SL +LLKDIAVNP
Sbjct: 602 SGLL--KLESKPRLIENGVTSMTSSVMPTSAVSVSQKV-RTASTDTASLQSLLKDIAVNP 658
Query: 679 TMLLNILKMGQQQKLAADAQQKSNDSSMNTMHPPIPSSIPPVSVTCSIP----------- 727
TMLLN+LKMG++QK+ A QK D P S P VS SIP
Sbjct: 659 TMLLNLLKMGERQKVPEKAIQKPMDPR-RAAQLPGSSVQPGVSTPLSIPASNALAANSLN 717
Query: 728 SGIL-----SKPMDELGKVRMKPRDPRRVLHGNALQRS-GSLGPEFKTDGPSAPCT---Q 778
SG+L + P E G +RMKPRDPRR+LHG+ LQR+ S+ + K + PS T +
Sbjct: 718 SGVLQDSSQNAPAAESGSIRMKPRDPRRILHGSTLQRTDSSMEKQTKVNDPSTLGTLTMK 777
Query: 779 GSKENLNFQKQLGAPE-------AKPVLSQSVLQ---PDITQQFTKNLKHIADFMSVSQP 828
G E+L QL + +K +S +L PD + QFTKNLK IAD + VSQ
Sbjct: 778 GKAEDLETPPQLDPRQNISQNGTSKMKISGELLSGKTPDFSTQFTKNLKSIADMVVVSQQ 837
Query: 829 LTSEPMVSQNSPIQPGQIKSGADMKAVVTN-----HDDKQTGTGSGPEAGPVGAHPQSAW 883
L + P + + Q+K+ D+K +N D + AGP + ++W
Sbjct: 838 LGNPP-----ASMHSVQLKTERDVKHNPSNPNAQDEDVSVSAASVTAAAGPTRS--MNSW 890
Query: 884 GDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPV 943
GDVEHLFEGYDD Q+ AIQ+ER RRLEEQ KMF+++KL LVLD+DHTLLNSAKF+EV+
Sbjct: 891 GDVEHLFEGYDDIQRVAIQRERVRRLEEQNKMFASQKLSLVLDIDHTLLNSAKFNEVESR 950
Query: 944 HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYA 1003
H+EILRKKEEQDREKP+RHLFRF HMGMWTKLRPGIW FLE+ASKL+E+HLYTMGNKLYA
Sbjct: 951 HEEILRKKEEQDREKPYRHLFRFLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYA 1010
Query: 1004 TEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVW 1063
TEMAK+LDPKGVLF GRVIS+GDDGDP DGDERVPKSKDLEGV+GMES+VVIIDDSVRVW
Sbjct: 1011 TEMAKLLDPKGVLFNGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVW 1070
Query: 1064 PHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
P +K+NLI VERY YFPCSRRQFGLLGPSLLE+D DE E+GTLASSL V +++H
Sbjct: 1071 PQHKMNLIAVERYLYFPCSRRQFGLLGPSLLELDRDEVPEEGTLASSLAVIEKIH 1125
>sp|Q00IB6|CPL4_ARATH RNA polymerase II C-terminal domain phosphatase-like 4 OS=Arabidopsis
thaliana GN=CPL4 PE=1 SV=1
Length = 440
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 124/212 (58%), Gaps = 30/212 (14%)
Query: 919 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRH------------LFRF 966
RKL LVLDLDHTLLN+ ++ P E++ K H H LF
Sbjct: 121 RKLYLVLDLDHTLLNTTILRDLKP----------EEEYLKSHTHSLQDGCNVSGGSLFLL 170
Query: 967 PHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD 1026
M M TKLRP + +FL+ AS++F M++YTMG++ YA +MAK+LDPKG F RVISR D
Sbjct: 171 EFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVISR-D 229
Query: 1027 DGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQF 1086
DG V K L+ VLG ESAV+I+DD+ WP +K NLIV+ERY +F S RQF
Sbjct: 230 DGT-------VRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQF 282
Query: 1087 GLLGPSLLEIDHDERSEDGTLASSLGVRQQLH 1118
SL E+ DE DG LA+ L V +Q H
Sbjct: 283 DHRYKSLSELKSDESEPDGALATVLKVLKQAH 314
>sp|Q7TSG2|CTDP1_MOUSE RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus
musculus GN=Ctdp1 PE=1 SV=1
Length = 960
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 21/180 (11%)
Query: 902 QKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHR 961
Q E+ R E+Q+++ RKL L++DLD TL+++ + H + I H
Sbjct: 165 QAEKLGR-EDQQRLHRNRKLVLMVDLDQTLIHTTEQHCPQMSNKGIF-----------HF 212
Query: 962 HLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRV 1021
L R M + T+LRP FLE+ +KL+E+H++T G++LYA +A LDP+ LF+ R+
Sbjct: 213 QLGRGEPM-LHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRI 271
Query: 1022 ISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRVWPHNKLNLIVVERYTYFP 1080
+SR + DPF K+ +L + +S V IIDD VW NLI V++Y YFP
Sbjct: 272 LSRDECIDPFS------KTGNLRNLFPCGDSMVCIIDDREDVWKFAP-NLITVKKYVYFP 324
>sp|Q9Y5B0|CTDP1_HUMAN RNA polymerase II subunit A C-terminal domain phosphatase OS=Homo
sapiens GN=CTDP1 PE=1 SV=3
Length = 961
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 20/171 (11%)
Query: 910 EEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHM 969
E+Q+++ RKL L++DLD TL+++ + H + I H L R M
Sbjct: 172 EDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIF-----------HFQLGRGEPM 220
Query: 970 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 1029
+ T+LRP FLE+ +KL+E+H++T G++LYA +A LDP+ LF+ R++SR + D
Sbjct: 221 -LHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECID 279
Query: 1030 PFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRVWPHNKLNLIVVERYTYF 1079
PF K+ +L + +S V IIDD VW NLI V++Y YF
Sbjct: 280 PFS------KTGNLRNLFPCGDSMVCIIDDREDVWKFAP-NLITVKKYVYF 323
>sp|Q9P376|FCP1_SCHPO RNA polymerase II subunit A C-terminal domain phosphatase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fcp1 PE=1 SV=1
Length = 723
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 44/216 (20%)
Query: 890 FEGYDDQQKAAIQK-----------ERTRRLEEQ--KKMFSARKLCLVLDLDHTLLNSAK 936
+ GY D +A I E RLE + K++ ++L L++DLD T++++
Sbjct: 121 YMGYSDMARANISMTHNTGDLTVSLEEASRLESENVKRLRQEKRLSLIVDLDQTIIHAT- 179
Query: 937 FHEVDP-----------VHDEILRKKEEQD-REKPHRHLFRFPHMGMWTKLRPGIWTFLE 984
VDP V+ ++LR + +E P + + + K RPG+ FL+
Sbjct: 180 ---VDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCY-----YIKFRPGLAQFLQ 231
Query: 985 RASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLE 1044
+ S+L+E+H+YTMG K YA E+AK++DP G LF RV+SR D G K L
Sbjct: 232 KISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------LAQKSLR 283
Query: 1045 GVLGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYF 1079
+ + S VV+IDD VW N NLI V Y +F
Sbjct: 284 RLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYEFF 318
>sp|Q03254|FCP1_YEAST RNA polymerase II subunit A C-terminal domain phosphatase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=FCP1 PE=1 SV=1
Length = 732
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 106/257 (41%), Gaps = 61/257 (23%)
Query: 857 TNHDDKQTG--TGSGPE--AGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQ 912
NHD G T G E A P GDV+ + + KE RR
Sbjct: 116 CNHDIVYGGLCTQCGKEVSADAFDGVPLDVVGDVDLQISETEAIRTGKALKEHLRR---- 171
Query: 913 KKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFR------- 965
+KL LV+DLD T+++ VDP E + D P+ R
Sbjct: 172 -----DKKLILVVDLDQTIIHCG----VDPTIAEW-----KNDPNNPNFETLRDVKSFTL 217
Query: 966 -----FPHMGM-----------------WTKLRPGIWTFLERASKLFEMHLYTMGNKLYA 1003
P M M + K+RPG+ F + + LFEMH+YTM + YA
Sbjct: 218 DEELVLPLMYMNDDGSMLRPPPVRKCWYYVKVRPGLKEFFAKVAPLFEMHIYTMATRAYA 277
Query: 1004 TEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRV 1062
++AK++DP G LF R++SR ++G +K L + +S VV+IDD V
Sbjct: 278 LQIAKIVDPTGELFGDRILSRDENGS--------LTTKSLAKLFPTDQSMVVVIDDRGDV 329
Query: 1063 WPHNKLNLIVVERYTYF 1079
W NLI V Y +F
Sbjct: 330 WNWCP-NLIKVVPYNFF 345
>sp|Q8SV03|FCP1_ENCCU RNA polymerase II subunit A C-terminal domain phosphatase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=FCP1 PE=1
SV=1
Length = 411
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 49/193 (25%)
Query: 896 QQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQD 955
++ AI KE+ LE Q K+ LVLDLD T+L++ + + +
Sbjct: 42 EEAVAIHKEKMEALEMQMKLI------LVLDLDQTVLHTT--YGTSSLEGTVK------- 86
Query: 956 REKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGV 1015
F KLRP + L R SKL+E+H+YTMG + YA + +++DP G
Sbjct: 87 --------FVIDRCRYCVKLRPNLDYMLRRISKLYEIHVYTMGTRAYAERIVEIIDPSGK 138
Query: 1016 LFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESA---------VVIIDDSVRVWPHN 1066
F R+I+R ++ +GVL + +VI+DD VW +
Sbjct: 139 YFDDRIITRDEN----------------QGVLVKRLSRLFPHDHRNIVILDDRPDVWDYC 182
Query: 1067 KLNLIVVERYTYF 1079
+ NL+++ + YF
Sbjct: 183 E-NLVLIRPFWYF 194
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus GN=Ctdspl2
PE=2 SV=1
Length = 465
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 869 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 926
PE+G AH ++ + + +F+ Y + +++ R+ K S + LVLD
Sbjct: 233 APESGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 292
Query: 927 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 986
LD TL VH + E +D LF+ ++ +LRP FLER
Sbjct: 293 LDETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 338
Query: 987 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 1046
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 339 SQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NI 391
Query: 1047 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 1076
LG + S +IID+S + + + N I +E +
Sbjct: 392 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 422
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis GN=ctdspl2
PE=2 SV=1
Length = 466
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 869 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 926
PE+G AH ++A+ + +F+ Y + +++ R+ K S + LVLD
Sbjct: 234 SPESGYSSAHAEAAYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 293
Query: 927 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 986
LD TL VH + E +D LF+ ++ +LRP FLER
Sbjct: 294 LDETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 339
Query: 987 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 1046
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 340 SQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFR--EHCVCVQGN----YIKDL-NI 392
Query: 1047 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 1076
LG + S +IID+S + + + N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis GN=ctdspl2-b
PE=2 SV=1
Length = 466
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 869 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 926
PE+G AH ++A+ + +F+ Y + +++ R+ K S + LVLD
Sbjct: 234 SPESGYSSAHAEAAYEEDWEVFDPYFFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 293
Query: 927 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 986
LD TL VH + E +D LF+ ++ +LRP FLER
Sbjct: 294 LDETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 339
Query: 987 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 1046
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 340 SQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFR--EHCVCVQGN----YIKDL-NI 392
Query: 1047 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 1076
LG + S +IID+S + + + N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis GN=ctdspl2-a
PE=2 SV=1
Length = 466
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 869 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 926
PE+G AH ++A+ + +F+ Y + +++ R+ K S + LVLD
Sbjct: 234 SPESGYSSAHAEAAYEEDWEVFDPYFFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 293
Query: 927 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 986
LD TL VH + E +D LF+ ++ +LRP FLER
Sbjct: 294 LDETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 339
Query: 987 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 1046
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 340 SQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFR--EHCVCVQGN----YIKDL-NI 392
Query: 1047 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 1076
LG + S +IID+S + + + N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 829 LTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSAWGDVEH 888
L P+ ++ ++ G+I + ADM + T GS V P A G E
Sbjct: 203 LNPRPLPHIDTTVEEGEIVTEADMPPL--------TAVGSNSNYPDVPPSP-PAEGTYEE 253
Query: 889 LFEGYD-----DQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPV 943
+E +D +++ TR+ K S + LVLDLD TL++ +
Sbjct: 254 DWEVFDPYFFIKHVPPLTEEQLTRKPALPLKTRSTPEFSLVLDLDETLVHCSL------- 306
Query: 944 HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYA 1003
E +D LF+ ++ +LRP FLER S+++E+ L+T K+YA
Sbjct: 307 -------NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYA 359
Query: 1004 TEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRV 1062
++ +LDPK L R+ + G+ KDL +LG + S VIID+S +
Sbjct: 360 DKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NILGRDLSKTVIIDNSPQA 412
Query: 1063 WPHNKLNLIVVERY 1076
+ + N I +E +
Sbjct: 413 FAYQLSNGIPIESW 426
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2 PE=1
SV=1
Length = 465
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 870 PEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLDL 927
PE+G AH ++ + + +F+ Y + +++ R+ K S + LVLDL
Sbjct: 234 PESGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDL 293
Query: 928 DHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 987
D TL VH + E +D LF+ ++ +LRP FLER S
Sbjct: 294 DETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMS 339
Query: 988 KLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVL 1047
+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +L
Sbjct: 340 QMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NIL 392
Query: 1048 GME-SAVVIIDDSVRVWPHNKLNLIVVERY 1076
G + S +IID+S + + + N I +E +
Sbjct: 393 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 422
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1
SV=2
Length = 466
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 870 PEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLDL 927
P++G AH ++ + + +F+ Y + +++ R+ K S + LVLDL
Sbjct: 235 PDSGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDL 294
Query: 928 DHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 987
D TL VH + E +D LF+ ++ +LRP FLER S
Sbjct: 295 DETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMS 340
Query: 988 KLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVL 1047
+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +L
Sbjct: 341 QMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NIL 393
Query: 1048 GME-SAVVIIDDSVRVWPHNKLNLIVVERY 1076
G + S +IID+S + + + N I +E +
Sbjct: 394 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2 PE=2
SV=2
Length = 466
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 869 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 926
P++G AH ++ + + +F+ Y + +++ R+ K S + LVLD
Sbjct: 234 SPDSGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 293
Query: 927 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 986
LD TL VH + E +D LF+ ++ +LRP FLER
Sbjct: 294 LDETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 339
Query: 987 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 1046
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 340 SQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NI 392
Query: 1047 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 1076
LG + S +IID+S + + + N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 864 TGTGSGPEAGPVGAHPQ-SAWGDVEHLFEGYD-----DQQKAAIQKERTRRLEEQKKMFS 917
T GS G V A A G E +E +D +++ TR+ K S
Sbjct: 219 TAPGSPATGGYVDASITVPAEGSYEEEWEVFDPYFFIKHVPPLTEEQLTRKPALPLKTRS 278
Query: 918 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRP 977
+ LVLDLD TL++ + +E+D D LF+ ++ +LRP
Sbjct: 279 TPEFSLVLDLDETLVHCS-LNELD-------------DAALTFPVLFQDVIYQVYVRLRP 324
Query: 978 GIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERV 1037
FLER S+++E+ L+T K+YA ++ +LDP+ L R+ + G+
Sbjct: 325 FFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRHRLFR--EHCVCVQGN--- 379
Query: 1038 PKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVERY 1076
KDL +LG + S +IID+S + + + N I +E +
Sbjct: 380 -YIKDL-NILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 417
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 914 KMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHL---FRFPHMG 970
K S+ K+ LVLDLD TL++ + +P+ E+PH F
Sbjct: 384 KEHSSPKISLVLDLDETLVHCS----TEPL-------------EQPHLTFPVFFNNTEYQ 426
Query: 971 MWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP 1030
++ K RP FL + S +FE+ ++T ++YA ++ ++DP + + D
Sbjct: 427 VFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKI---KYRLYRDSCVY 483
Query: 1031 FDGDERVPKSKDLEGVLGME-SAVVIIDDS 1059
DG+ KDL VLG + VVIID+S
Sbjct: 484 VDGNYL----KDL-SVLGRDLKQVVIIDNS 508
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 971 MWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPK 1013
++ +LRP + TFL R +K FE+ ++T K+YA ++ +LDP+
Sbjct: 101 VYVRLRPHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPR 143
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 919 RKLCLVLDLDHTLLNSA--KFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLR 976
+K CL+LDLD TL++S+ H D + E D+ ++ R
Sbjct: 226 QKKCLILDLDETLVHSSFKYMHSAD-----FVLPVEIDDQVH-----------NVYVIKR 269
Query: 977 PGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVL 1016
PG+ FL R S+L+E+ ++T YA + LDP G +
Sbjct: 270 PGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGTI 309
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 28/104 (26%)
Query: 920 KLCLVLDLDHTL-------LNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMW 972
K CL+LDLD TL L SA F + D++ ++
Sbjct: 257 KKCLILDLDETLVHSSFKYLRSADFVLSVEIDDQV---------------------HNVY 295
Query: 973 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVL 1016
RPG+ FLER KLFE+ ++T Y + +LD V+
Sbjct: 296 VIKRPGVEEFLERVGKLFEVVVFTASVSRYGDPLLDILDTDKVI 339
>sp|Q20432|CNEP1_CAEEL CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis elegans
GN=scpl-2 PE=3 SV=1
Length = 246
Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 914 KMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQD-------REKPHRHLFRF 966
++ + ++ LVLDLD TL++S HD +LR+ + R RH +F
Sbjct: 51 RLLTVKRKILVLDLDETLIHSH--------HDGVLRQTVKPGTPSDFTIRVVIDRHPVKF 102
Query: 967 PHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD 1026
RP + FL S+ +E+ ++T ++Y T +A LD GR I +
Sbjct: 103 S-----VHERPHVDYFLSVVSQWYELVVFTASMEVYGTSVADRLD------RGRGILKRR 151
Query: 1027 DGDPFDGDERVPKSKDLEGVLGMESAVVIIDDS---VRVWPHNKL 1068
E +KDL + S++ I+D+S R +PHN +
Sbjct: 152 YFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYRKFPHNAI 196
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 979
K C+V+DLD TL++S+ P+ + E D ++ + PH+
Sbjct: 106 KKCVVIDLDETLVHSS----FKPISNADFIVPVEIDGTIHQVYVLKRPHVD--------- 152
Query: 980 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA-----GRVISRGDDGDPFDGD 1034
FL+R +LFE L+T YA +A +LD GV A V RG+
Sbjct: 153 -EFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGN-------- 203
Query: 1035 ERVPKSKDLEGVLGME-SAVVIIDDS 1059
KDL LG E S V+I+D+S
Sbjct: 204 ----YVKDLSR-LGRELSKVIIVDNS 224
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2 SV=2
Length = 275
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 979
K C+V+DLD TL++S+ P+ + E D ++ + PH+
Sbjct: 105 KKCVVIDLDETLVHSS----FKPISNADFIVPVEIDGTIHQVYVLKRPHVD--------- 151
Query: 980 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA-----GRVISRGDDGDPFDGD 1034
FL+R +LFE L+T YA +A +LD GV A V RG+
Sbjct: 152 -EFLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGN-------- 202
Query: 1035 ERVPKSKDLEGVLGME-SAVVIIDDS 1059
KDL LG E S V+I+D+S
Sbjct: 203 ----YVKDLSR-LGRELSKVIIVDNS 223
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 979
K C+V+DLD TL++S+ P+ + E D ++ + PH+
Sbjct: 106 KKCVVIDLDETLVHSS----FKPISNADFIVPVEIDGTIHQVYVLKRPHVD--------- 152
Query: 980 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA-----GRVISRGDDGDPFDGD 1034
FL+R +LFE L+T YA +A +LD GV A V RG+
Sbjct: 153 -EFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGN-------- 203
Query: 1035 ERVPKSKDLEGVLGME-SAVVIIDDS 1059
KDL LG E S V+I+D+S
Sbjct: 204 ----YVKDLSR-LGRELSKVIIVDNS 224
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 896 QQKAAIQKER-TRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQ 954
++ AI K+ + L + K + K+C+V+DLD TL++S+ PV++ E
Sbjct: 65 EENGAIPKQTPVQYLLPEAKAQDSDKICVVIDLDETLVHSS----FKPVNNADFIIPVEI 120
Query: 955 DREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKG 1014
D ++ + PH+ FL+R +LFE L+T YA +A +LD G
Sbjct: 121 DGVVHQVYVLKRPHVD----------EFLQRMGELFECVLFTASLAKYADPVADLLDKWG 170
Query: 1015 VLFA 1018
A
Sbjct: 171 AFRA 174
>sp|Q61C05|CNEP1_CAEBR CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis briggsae
GN=scpl-2 PE=3 SV=1
Length = 246
Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 914 KMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQD-------REKPHRHLFRF 966
++ + ++ LVLDLD TL++S HD +LR+ + R RH +F
Sbjct: 51 RLLTVKRKILVLDLDETLIHSH--------HDGVLRQTVKPGTPSDFTIRVVIDRHPVKF 102
Query: 967 PHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD 1026
RP + FL S+ +E+ ++T ++Y + +A LD GR I +
Sbjct: 103 S-----VHERPHVDYFLTVVSQWYELVVFTASMEVYGSSVADKLD------RGRGILKRR 151
Query: 1027 DGDPFDGDERVPKSKDLEGVLGMESAVVIIDDS---VRVWPHNKL 1068
E +KDL + S++ I+D+S R +PHN +
Sbjct: 152 YFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYRKFPHNAI 196
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 920 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 979
K+C+V+DLD TL++S+ PV++ E D ++ + PH+
Sbjct: 90 KICVVIDLDETLVHSS----FKPVNNADFIIPVEIDGVVHQVYVLKRPHVD--------- 136
Query: 980 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA 1018
FL+R +LFE L+T YA +A +LD G A
Sbjct: 137 -EFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRA 174
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 32/188 (17%)
Query: 912 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 964
+ ++ + ++ LVLDLD TL++S HD +LR +H
Sbjct: 54 RNRLNNVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 105
Query: 965 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 1024
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 106 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKAILKRRYYRQ 160
Query: 1025 G---DDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPC 1081
D G KDL V S+VVI+D+S + + N I ++ + P
Sbjct: 161 HCTLDSGSYI---------KDLSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPS 211
Query: 1082 SRRQFGLL 1089
LL
Sbjct: 212 DTALLNLL 219
>sp|Q9W0S3|TI50B_DROME Mitochondrial import inner membrane translocase subunit TIM50-B
OS=Drosophila melanogaster GN=ttm2 PE=2 SV=1
Length = 409
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 970 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 1029
G K RPG+ FL+ +K FE+ +YT + + LDP G + V D
Sbjct: 230 GWRFKKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLV----RDST 285
Query: 1030 PFDGDERVPKSKDLEGVLGMESAVVIID---DSVRVWPHNKLNL 1070
FDG V K+L+ + VV++D +S + P N ++
Sbjct: 286 HFDGGHHV---KNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSI 326
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 912 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 964
+ ++ + ++ LVLDLD TL++S HD +LR +H
Sbjct: 54 RNRLNAVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 105
Query: 965 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 1024
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 106 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQ 160
Query: 1025 G---DDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPC 1081
D G KDL V S++VI+D+S + + N I ++ + P
Sbjct: 161 HCTLDLGSYI---------KDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPS 211
Query: 1082 SRRQFGLLGPSL--LEIDHDERS 1102
LL P L L D RS
Sbjct: 212 DTALLNLL-PMLDALRFTSDVRS 233
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 29/200 (14%)
Query: 912 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 964
+ ++ ++ LVLDLD TL++S HD +LR +H
Sbjct: 53 RNRLAQVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 104
Query: 965 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 1024
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 105 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQ 159
Query: 1025 GDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 1084
E KDL V S++VI+D+S + + N I ++ + P
Sbjct: 160 ------HCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTA 213
Query: 1085 QFGLLGPSL--LEIDHDERS 1102
LL P L L D RS
Sbjct: 214 LLNLL-PMLDALRFTADVRS 232
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 29/200 (14%)
Query: 912 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 964
+ ++ ++ LVLDLD TL++S HD +LR +H
Sbjct: 53 RNRLAQVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 104
Query: 965 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 1024
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 105 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQ 159
Query: 1025 GDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 1084
E KDL V S++VI+D+S + + N I ++ + P
Sbjct: 160 ------HCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTA 213
Query: 1085 QFGLLGPSL--LEIDHDERS 1102
LL P L L D RS
Sbjct: 214 LLNLL-PMLDALRFTADVRS 232
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 29/200 (14%)
Query: 912 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 964
+ ++ ++ LVLDLD TL++S HD +LR +H
Sbjct: 53 RNRLAQVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 104
Query: 965 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 1024
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 105 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQ 159
Query: 1025 GDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 1084
E KDL V S++VI+D+S + + N I ++ + P
Sbjct: 160 ------HCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTA 213
Query: 1085 QFGLLGPSL--LEIDHDERS 1102
LL P L L D RS
Sbjct: 214 LLNLL-PMLDALRFTADVRS 232
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2 SV=1
Length = 244
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 29/200 (14%)
Query: 912 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 964
+ ++ ++ LVLDLD TL++S HD +LR +H
Sbjct: 53 RNRLSQVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 104
Query: 965 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 1024
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 105 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQ 159
Query: 1025 GDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 1084
E KDL V S++VI+D+S + + N I ++ + P
Sbjct: 160 ------HCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTA 213
Query: 1085 QFGLLGPSL--LEIDHDERS 1102
LL P L L D RS
Sbjct: 214 LLNLL-PMLDALRFTADVRS 232
>sp|Q5ZIE8|MCAF1_CHICK Activating transcription factor 7-interacting protein 1 OS=Gallus
gallus GN=ATF7IP PE=2 SV=1
Length = 1085
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 828 PLTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAH 878
P S P V +NSP G +++ ++AV T H QT S P G G H
Sbjct: 661 PSVSSPGVQRNSPASAGSVRTTLAVQAVSTTHPVAQTTRTSLPTVGTSGLH 711
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 437,891,032
Number of Sequences: 539616
Number of extensions: 20351185
Number of successful extensions: 63003
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 61215
Number of HSP's gapped (non-prelim): 1778
length of query: 1118
length of database: 191,569,459
effective HSP length: 128
effective length of query: 990
effective length of database: 122,498,611
effective search space: 121273624890
effective search space used: 121273624890
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)