Your job contains 1 sequence.
>001235
MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ
PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH
PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM
AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV
LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML
MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG
LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD
GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL
CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH
FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN
VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK
LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR
NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK
RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE
MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI
NFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSEEGI
SLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001235
(1117 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012300 - symbol:PHYA "phytochrome A" species:... 4690 0. 1
UNIPROTKB|P06593 - symbol:PHYA3 "Phytochrome A type 3" sp... 3763 0. 1
TAIR|locus:2005515 - symbol:PHYB "AT2G18790" species:3702... 2875 1.6e-299 1
TAIR|locus:2005535 - symbol:PHYD "phytochrome D" species:... 2862 3.9e-298 1
TAIR|locus:2165199 - symbol:PHYC "phytochrome C" species:... 2861 4.9e-298 1
TAIR|locus:2005536 - symbol:PHYE "phytochrome E" species:... 2443 9.7e-254 1
UNIPROTKB|Q55168 - symbol:cph1 "Phytochrome-like protein ... 590 1.9e-56 1
UNIPROTKB|Q4K656 - symbol:bphP "Bacteriophytochrome histi... 419 7.1e-40 3
UNIPROTKB|Q48G81 - symbol:bphP "Bacteriophytochrome histi... 394 6.9e-38 2
UNIPROTKB|Q7CY45 - symbol:Atu1990 "Bacteriophytochrome pr... 416 2.2e-35 2
ASPGD|ASPL0000049609 - symbol:fphA species:162425 "Emeric... 343 6.0e-28 4
UNIPROTKB|G4MU11 - symbol:MGG_12377 "Phytochrome-1" speci... 325 4.3e-27 5
UNIPROTKB|Q9KSB0 - symbol:VC_1349 "Sensory box sensor his... 195 4.2e-11 1
TIGR_CMR|VC_1349 - symbol:VC_1349 "sensory box sensor his... 195 4.2e-11 1
UNIPROTKB|Q1D8M1 - symbol:MXAN_2785 "Sensory box histidin... 176 3.5e-09 1
TIGR_CMR|GSU_1285 - symbol:GSU_1285 "sensory box sensor h... 174 3.7e-09 1
UNIPROTKB|P0AEC3 - symbol:arcB "ArcB sensory histidine ki... 173 4.7e-09 1
TIGR_CMR|SO_0859 - symbol:SO_0859 "sensory box histidine ... 154 1.5e-08 2
UNIPROTKB|P0AEC5 - symbol:barA species:83333 "Escherichia... 165 4.3e-08 1
TIGR_CMR|SPO_0094 - symbol:SPO_0094 "sensory box sensor h... 163 6.1e-08 2
UNIPROTKB|Q9KPJ8 - symbol:VC_2369 "Sensor histidine kinas... 173 1.0e-07 2
TIGR_CMR|VC_2369 - symbol:VC_2369 "sensor histidine kinas... 173 1.0e-07 2
TIGR_CMR|CPS_4165 - symbol:CPS_4165 "sensory box histidin... 169 1.3e-07 2
DICTYBASE|DDB_G0277883 - symbol:dhkJ "histidine kinase J"... 169 1.6e-07 2
TIGR_CMR|CPS_4117 - symbol:CPS_4117 "sensor histidine kin... 159 2.0e-07 1
CGD|CAL0002691 - symbol:NIK1 species:5476 "Candida albica... 158 3.0e-07 1
UNIPROTKB|Q5A599 - symbol:NIK1 "Putative uncharacterized ... 158 3.0e-07 1
TIGR_CMR|SO_4445 - symbol:SO_4445 "response regulator/sen... 158 3.2e-07 1
TIGR_CMR|GSU_2575 - symbol:GSU_2575 "sensor histidine kin... 155 4.6e-07 1
TIGR_CMR|GSU_2314 - symbol:GSU_2314 "sensory box histidin... 147 5.0e-07 2
DICTYBASE|DDB_G0274191 - symbol:dhkC "histidine kinase C"... 156 5.7e-07 1
DICTYBASE|DDB_G0277845 - symbol:dhkB "histidine kinase B"... 172 9.7e-07 2
UNIPROTKB|P16497 - symbol:kinA "Sporulation kinase A" spe... 107 1.2e-06 2
UNIPROTKB|Q9KLK7 - symbol:luxQ "Autoinducer 2 sensor kina... 150 1.6e-06 1
TIGR_CMR|VC_A0736 - symbol:VC_A0736 "sensor histidine kin... 150 1.6e-06 1
TIGR_CMR|SO_3457 - symbol:SO_3457 "sensor histidine kinas... 150 1.8e-06 1
UNIPROTKB|Q9KLN4 - symbol:VC_A0709 "Sensor protein TorS" ... 153 3.2e-06 2
TIGR_CMR|VC_A0709 - symbol:VC_A0709 "sensor protein TorS"... 153 3.2e-06 2
UNIPROTKB|P54302 - symbol:luxQ "Autoinducer 2 sensor kina... 146 4.4e-06 1
UNIPROTKB|Q9KPC0 - symbol:VC_2453 "Sensor histidine kinas... 151 6.5e-06 2
TIGR_CMR|VC_2453 - symbol:VC_2453 "sensor histidine kinas... 151 6.5e-06 2
UNIPROTKB|Q9KR16 - symbol:VC_1831 "Sensor histidine kinas... 142 9.6e-06 1
TIGR_CMR|VC_1831 - symbol:VC_1831 "sensor histidine kinas... 142 9.6e-06 1
UNIPROTKB|Q55434 - symbol:cph2 "Phytochrome-like protein ... 156 1.4e-05 2
ASPGD|ASPL0000074067 - symbol:nikA species:162425 "Emeric... 153 1.4e-05 2
TIGR_CMR|GSU_0718 - symbol:GSU_0718 "sensory box histidin... 139 1.8e-05 2
ASPGD|ASPL0000033199 - symbol:tcsA species:162425 "Emeric... 139 1.8e-05 1
UNIPROTKB|Q9P896 - symbol:tcsA "Two-component system prot... 139 1.8e-05 1
TAIR|locus:2177261 - symbol:HK2 "histidine kinase 2" spec... 125 2.7e-05 2
TIGR_CMR|CPS_2475 - symbol:CPS_2475 "sensor histidine kin... 137 3.6e-05 1
UNIPROTKB|P14376 - symbol:rcsC "RcsC sensory histidine ki... 137 4.6e-05 1
TIGR_CMR|GSU_1265 - symbol:GSU_1265 "sensor histidine kin... 132 5.5e-05 1
TIGR_CMR|GSU_1928 - symbol:GSU_1928 "sensor histidine kin... 134 7.9e-05 1
TIGR_CMR|SO_4002 - symbol:SO_4002 "sensory transduction h... 154 0.00015 3
UNIPROTKB|P14377 - symbol:zraS species:83333 "Escherichia... 128 0.00016 1
TIGR_CMR|GSU_1302 - symbol:GSU_1302 "sensor histidine kin... 130 0.00022 1
TIGR_CMR|CHY_1856 - symbol:CHY_1856 "sensor histidine kin... 128 0.00023 1
DICTYBASE|DDB_G0282927 - symbol:dhkL "histidine kinase L"... 114 0.00026 2
DICTYBASE|DDB_G0269204 - symbol:dhkE "histidine kinase E"... 133 0.00033 3
TIGR_CMR|CHY_0935 - symbol:CHY_0935 "sensory box histidin... 116 0.00041 2
DICTYBASE|DDB_G0280961 - symbol:dhkA "histidine kinase A"... 153 0.00048 3
TIGR_CMR|SPO_0163 - symbol:SPO_0163 "sensory box histidin... 120 0.00052 3
UNIPROTKB|Q4K894 - symbol:gacS "Sensor protein GacS" spec... 138 0.00060 2
TIGR_CMR|GSU_2916 - symbol:GSU_2916 "sensor histidine kin... 123 0.00062 1
TIGR_CMR|SPO_0132 - symbol:SPO_0132 "sensor histidine kin... 125 0.00065 1
UNIPROTKB|Q06904 - symbol:sasA "Adaptive-response sensory... 121 0.00068 1
DICTYBASE|DDB_G0277887 - symbol:dhkK "histidine kinase K"... 127 0.00073 1
TIGR_CMR|GSU_1004 - symbol:GSU_1004 "sensory box histidin... 105 0.00086 2
TIGR_CMR|CBU_1084 - symbol:CBU_1084 "sensory box sensor h... 123 0.00097 1
>TAIR|locus:2012300 [details] [associations]
symbol:PHYA "phytochrome A" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009638 "phototropism" evidence=IMP]
[GO:0009630 "gravitropism" evidence=RCA;IMP] [GO:0016604 "nuclear
body" evidence=IDA] [GO:0010161 "red light signaling pathway"
evidence=IMP] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA;IMP] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0031516 "far-red light photoreceptor activity"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010017 "red or far-red light signaling pathway" evidence=RCA]
[GO:0009883 "red or far-red light photoreceptor activity"
evidence=TAS] [GO:0010201 "response to continuous far red light
stimulus by the high-irradiance response system" evidence=IMP]
[GO:0010203 "response to very low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
GO:GO:0005737 GO:GO:0016020 GO:GO:0006355 GO:GO:0017148
GO:GO:0046685 GO:GO:0016607 GO:GO:0006351 GO:GO:0009640
GO:GO:0009630 EMBL:AC003970 GO:GO:0023014 GO:GO:0018298
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0016604 GO:GO:0010161 GO:GO:0010201 GO:GO:0009638
GO:GO:0008020 GO:GO:0017006 EMBL:X17341 EMBL:L21154 EMBL:AY039520
IPI:IPI00535033 IPI:IPI00891850 PIR:A33473 PIR:D86229
RefSeq:NP_001117256.1 RefSeq:NP_172428.1 UniGene:At.22828
ProteinModelPortal:P14712 SMR:P14712 IntAct:P14712
MINT:MINT-1174780 STRING:P14712 PaxDb:P14712 PRIDE:P14712
EnsemblPlants:AT1G09570.1 GeneID:837483 KEGG:ath:AT1G09570
TAIR:At1g09570 HOGENOM:HOG000272703 InParanoid:P14712 KO:K12120
OMA:RWGGAKH PhylomeDB:P14712 ProtClustDB:CLSN2679275
Genevestigator:P14712 GermOnline:AT1G09570 GO:GO:0031516
GO:GO:0010203 Uniprot:P14712
Length = 1122
Score = 4690 (1656.0 bits), Expect = 0., P = 0.
Identities = 899/1121 (80%), Positives = 993/1121 (88%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENA ELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHC+TS KPFYAI+HRVTGS+II
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+ GD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ Q++EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 480
Query: 477 DSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DS VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 601 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 661 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A++ QDPEKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TA+KRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXX 956
AY KRQIRNPLSGI+F+RKM+EGTELG EQ+R+L TSA CQ+QL K
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGC 960
Query: 957 XXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
EM EFTLNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTS 1076
+++NF P+GGQL VS+SL KDQLG+SVHLA LE+R+TH G GIPE LL+QMFG+E D S
Sbjct: 1021 LMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDVS 1080
Query: 1077 EEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH 1117
EEG+SL++SRKLVKLMNGDVQYLR+AGKS+FI++ ELAAA+
Sbjct: 1081 EEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAAN 1121
>UNIPROTKB|P06593 [details] [associations]
symbol:PHYA3 "Phytochrome A type 3" species:4498 "Avena
sativa" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR001294
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR012129
InterPro:IPR013515 InterPro:IPR013516 InterPro:IPR013654
InterPro:IPR013767 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 GO:GO:0000160 GO:GO:0008020
EMBL:X03242 EMBL:M18822 PIR:A29631 ProteinModelPortal:P06593
IntAct:P06593 Gramene:P06593 GO:GO:0017006 Uniprot:P06593
Length = 1129
Score = 3763 (1329.7 bits), Expect = 0., P = 0.
Identities = 716/1125 (63%), Positives = 884/1125 (78%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MSSSRPA SSS+ + ARV+AQTT+DA+L+A++E SG SFDYS V QQ
Sbjct: 1 MSSSRPASSSSSRNRQSSQARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
RS++V AYL HIQKGKLIQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D
Sbjct: 61 GRSEKVI-AYLQHIQKGKLIQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDP 119
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P LGIG++++++F+ A+AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++
Sbjct: 120 PRLGIGTNVRSLFSDQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVV 179
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKP E P TAAGALQSYKLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVM
Sbjct: 180 DFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVM 239
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEV SEITK GLEPYLGLHYPATDIPQAAR LFMKNKVRMI DCRAR +KV
Sbjct: 240 AYKFHEDDHGEVFSEITKPGLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKV 299
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXX--GDNTLP--- 355
++ E LPFD++LCGS LRAPHSCHLQYMENMNSIASLVMAVVVN+ ++ P
Sbjct: 300 IEAEALPFDISLCGSALRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQ 359
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QK+K+LWGL+VCH+ +PR+VPFPLRYACEFLAQVFA+HVN+E ELE Q+ EKNIL+ QT+
Sbjct: 360 QKKKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTM 419
Query: 416 LCDMLMRDA-PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
L DML R+A PL IV+ +PNIMDLVKCDGAALLY K+WRL P + Q+HDI WLS+
Sbjct: 420 LSDMLFREASPLTIVSGTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDV 479
Query: 475 HMDSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DS ++CGMA +I+ KD++FWFRS TA+E+RWGGAK++
Sbjct: 480 HRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKND 539
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P + DD R+MHPR SFKAFLEVVK +SLPW DYEMDAIHSLQLILR D +
Sbjct: 540 PSDMDDSRRMHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREA- 598
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S+ +++ DLK++G+ EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD
Sbjct: 599 SLDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVD 658
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
AIG+H LTLVEDSS+ V+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACAS
Sbjct: 659 DAIGRHILTLVEDSSVPVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACAS 718
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLHD+VVGVCFVAQD+T K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWC EW
Sbjct: 719 RDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEW 778
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R+EV+DK+LL EVF ++ A C LKN++AFV+L +++N A++G++ EK P
Sbjct: 779 NAAMTKLTGWNRDEVLDKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAP 838
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF R+GKY ECLL N+K + G +TGVFCF+ +ASHELQ AL VQ+ SEQT+LKRLK
Sbjct: 839 FGFFDRSGKYIECLLSANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLK 898
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXX 954
A +Y + I NPLSG+++SRK ++ T+L EQ + +H C Q++K
Sbjct: 899 AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITE 958
Query: 955 XXX--XXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVL 1012
EM EF L +V+VA++SQV++ KGIRI E+ M +++YGD +RLQQ+L
Sbjct: 959 KSSCLDLEMAEFLLQDVVVAAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQIL 1018
Query: 1013 ADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSE 1072
+DFL IS+ F P GG + +SS LTK+ +G+++HL LELRI H G G+P L+ QMF +
Sbjct: 1019 SDFLFISVKFSPVGGSVEISSKLTKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEED 1078
Query: 1073 G-DTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAA 1116
+ SEEG+SLL+SR L++LMNGDV++LREAG STFI++ ELA+A
Sbjct: 1079 NKEQSEEGLSLLVSRNLLRLMNGDVRHLREAGVSTFIITAELASA 1123
>TAIR|locus:2005515 [details] [associations]
symbol:PHYB "AT2G18790" species:3702 "Arabidopsis
thaliana" [GO:0004673 "protein histidine kinase activity"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009649 "entrainment of circadian clock"
evidence=IMP] [GO:0009883 "red or far-red light photoreceptor
activity" evidence=IMP] [GO:0009638 "phototropism" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0009630
"gravitropism" evidence=RCA;IMP] [GO:0009687 "abscisic acid
metabolic process" evidence=IMP] [GO:0010029 "regulation of seed
germination" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0010617 "circadian regulation of calcium
ion oscillation" evidence=IMP] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0031347 "regulation of defense
response" evidence=IMP] [GO:0010148 "transpiration" evidence=IMP]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0015979 "photosynthesis" evidence=IMP] [GO:0006325 "chromatin
organization" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0010017 "red or far-red light signaling pathway"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0016604 "nuclear body"
evidence=IDA] [GO:0031516 "far-red light photoreceptor activity"
evidence=IDA] [GO:0031517 "red light photoreceptor activity"
evidence=IDA] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0010202 "response to low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 GO:GO:0006355 GO:GO:0016607 GO:GO:0009649
GO:GO:0009409 GO:GO:0006351 GO:GO:0010148 GO:GO:0009630
GO:GO:0009687 GO:GO:0023014 GO:GO:0018298 TIGRFAMs:TIGR00229
GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0010029 GO:GO:0000160 GO:GO:0015979 GO:GO:0006325
GO:GO:0010161 EMBL:AC005724 GO:GO:0009867 GO:GO:0010374
GO:GO:0031347 GO:GO:0010617 GO:GO:0009638 GO:GO:0008020
GO:GO:0009883 eggNOG:COG4251 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17342 EMBL:L09262 EMBL:AY466496
IPI:IPI00521343 PIR:B33473 RefSeq:NP_179469.1 UniGene:At.96
ProteinModelPortal:P14713 SMR:P14713 DIP:DIP-31742N IntAct:P14713
MINT:MINT-192399 STRING:P14713 PaxDb:P14713 PRIDE:P14713
ProMEX:P14713 EnsemblPlants:AT2G18790.1 GeneID:816394
KEGG:ath:AT2G18790 TAIR:At2g18790 InParanoid:P14713 KO:K12121
OMA:AVAYITK PhylomeDB:P14713 Genevestigator:P14713
GermOnline:AT2G18790 GO:GO:0010202 Uniprot:P14713
Length = 1172
Score = 2875 (1017.1 bits), Expect = 1.6e-299, P = 1.6e-299
Identities = 563/1121 (50%), Positives = 766/1121 (68%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG S FDYS S++ +T G
Sbjct: 40 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 94
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 95 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLE 152
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 153 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 212
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 213 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 272
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 273 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 332
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N G N +
Sbjct: 333 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 392
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 393 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 452
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 453 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 512
Query: 478 STGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DS VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 513 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 572
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K +
Sbjct: 573 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKVVD 631
Query: 598 SKL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
+ C D+ E G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV
Sbjct: 632 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 691
Query: 654 DKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNAC 712
++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + ++VNAC
Sbjct: 692 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 751
Query: 713 ASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCC 772
+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE C
Sbjct: 752 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 811
Query: 773 EWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEK 832
EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ GQD +K
Sbjct: 812 EWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGGQDTDK 868
Query: 833 VPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKR 892
PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 869 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 928
Query: 893 LKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXX 952
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +
Sbjct: 929 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 988
Query: 953 XXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVL 1012
+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR+QQ+L
Sbjct: 989 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1048
Query: 1013 ADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSE 1072
A+FL I + P+ + + S Q+ E R+ G G+P L+ MF S
Sbjct: 1049 AEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPPELVRDMFHSS 1108
Query: 1073 GDTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVEL 1113
TS EG+ L + RK++KLMNG+VQY+RE+ +S F++ +EL
Sbjct: 1109 RWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILEL 1149
>TAIR|locus:2005535 [details] [associations]
symbol:PHYD "phytochrome D" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009883 "red
or far-red light photoreceptor activity" evidence=IGI] [GO:0010017
"red or far-red light signaling pathway" evidence=IGI;RCA]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160 EMBL:Z97340
EMBL:AL161543 GO:GO:0008020 GO:GO:0009883 GO:GO:0017006
HOGENOM:HOG000272703 ProtClustDB:CLSN2679275 EMBL:X76609
IPI:IPI00538270 PIR:B71429 RefSeq:NP_193360.1 UniGene:At.33095
ProteinModelPortal:P42497 SMR:P42497 IntAct:P42497 STRING:P42497
PaxDb:P42497 PRIDE:P42497 EnsemblPlants:AT4G16250.1 GeneID:827319
KEGG:ath:AT4G16250 TAIR:At4g16250 InParanoid:P42497 KO:K12122
OMA:INDIVEW PhylomeDB:P42497 ArrayExpress:P42497
Genevestigator:P42497 GermOnline:AT4G16250 Uniprot:P42497
Length = 1164
Score = 2862 (1012.5 bits), Expect = 3.9e-298, P = 3.9e-298
Identities = 566/1120 (50%), Positives = 758/1120 (67%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG S FDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N G+ NT +
Sbjct: 337 VVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSD 516
Query: 478 STGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DS VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-- 595
KDDG++M+PRSSF+ FLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D +
Sbjct: 577 KDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 596 -IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXX 953
K LAY + I+NPLSG+ F+ ++E +L +QK+LL TS C++Q+ K
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 XXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
E EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSEG 1073
+FL + + P G + + T +Q+ LE R+ AG G+P + MF S
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSR 1113
Query: 1074 DTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVEL 1113
TS EG+ L + RK++KLMNG VQY+RE +S F++ +EL
Sbjct: 1114 WTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIEL 1153
>TAIR|locus:2165199 [details] [associations]
symbol:PHYC "phytochrome C" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008020
"G-protein coupled photoreceptor activity" evidence=IEA]
[GO:0009584 "detection of visible light" evidence=IEA] [GO:0009585
"red, far-red light phototransduction" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017006 "protein-tetrapyrrole linkage"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 GO:GO:0023014 GO:GO:0018298 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0008020 EMBL:AB005236 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17343 EMBL:Z32538 IPI:IPI00516887
PIR:C33473 RefSeq:NP_198433.1 UniGene:At.97
ProteinModelPortal:P14714 SMR:P14714 IntAct:P14714 STRING:P14714
PaxDb:P14714 PRIDE:P14714 EnsemblPlants:AT5G35840.1 GeneID:833570
KEGG:ath:AT5G35840 TAIR:At5g35840 InParanoid:P14714 OMA:LYGDNLR
PhylomeDB:P14714 Genevestigator:P14714 GermOnline:AT5G35840
Uniprot:P14714
Length = 1111
Score = 2861 (1012.2 bits), Expect = 4.9e-298, P = 4.9e-298
Identities = 564/1116 (50%), Positives = 768/1116 (68%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPR 62
SS ++S S +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P
Sbjct: 2 SSNTSRSCST--RSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIP- 58
Query: 63 SDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPV 122
S V+T YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+
Sbjct: 59 SSAVST-YLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREA 117
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D+K++F +P SAL+KA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID
Sbjct: 118 LTIGTDVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDL 177
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPV P EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM Y
Sbjct: 178 EPVSPDEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVY 237
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+Q
Sbjct: 238 KFHEDGHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQ 297
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKRKRLW 362
D+ L ++L GSTLRAPH CH QYM NM S+ASLVM+V +N N Q + LW
Sbjct: 298 DKSLSQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLW 357
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R
Sbjct: 358 GLVVCHHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFR 417
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
+AP+GIVTQSPNIMDLVKCDGAAL Y++ +W LGVTP + Q+ D++ W+ + H +TG +
Sbjct: 418 NAPIGIVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFT 477
Query: 483 ADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
+S +CGMAAV IS KD +FWFRS TA +++WGGA+H+P+++D G+
Sbjct: 478 TESLMESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GK 536
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD 602
+MHPRSSFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + + L D
Sbjct: 537 RMHPRSSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQEEHSKTV----VDVPLVD 592
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
+++ + EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK
Sbjct: 593 NRVQKVDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVS 652
Query: 663 TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
LVED S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+
Sbjct: 653 DLVEDDSVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVL 712
Query: 723 GVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLT 782
GVCF+ QD+T QKT+ + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+
Sbjct: 713 GVCFIGQDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLS 772
Query: 783 GWKREEVIDKLLLAEVFGTN-MACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFAR 840
G KREEV++K+LL EVF T+ CC LK+ + L I N +SGQ + EK+ FGF+ R
Sbjct: 773 GIKREEVVNKILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHR 831
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
+G + E LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY +
Sbjct: 832 DGSFIEALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLR 891
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXE 960
++++P I F + ++ + L +QKRLL TS C+ QL K +
Sbjct: 892 HEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELD 951
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
EF L E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI
Sbjct: 952 CSEFGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSI 1011
Query: 1021 NFVPNGGQLMVSSSLTK--DQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGS-EGDTSE 1077
F P L VS + + +G+ + LE RI H G+PE L+ +MF TS
Sbjct: 1012 RFTPALRGLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSR 1071
Query: 1078 EGISLLISRKLVKLMN-GDVQYLREAGKSTFIVSVE 1112
EG+ L I++KLVKLM G ++YLRE+ S F++ E
Sbjct: 1072 EGLGLHITQKLVKLMERGTLRYLRESEMSAFVILTE 1107
>TAIR|locus:2005536 [details] [associations]
symbol:PHYE "phytochrome E" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 EMBL:AL110123 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
EMBL:AL161548 UniGene:At.32943 UniGene:At.70995 GO:GO:0008020
GO:GO:0017006 HOGENOM:HOG000272703 EMBL:X76610 EMBL:AK221424
IPI:IPI00524548 PIR:S46313 RefSeq:NP_193547.4
ProteinModelPortal:P42498 SMR:P42498 IntAct:P42498 STRING:P42498
PaxDb:P42498 PRIDE:P42498 EnsemblPlants:AT4G18130.1 GeneID:827538
KEGG:ath:AT4G18130 TAIR:At4g18130 InParanoid:P42498 KO:K12123
OMA:LCLVNST Genevestigator:P42498 GermOnline:AT4G18130
Uniprot:P42498
Length = 1112
Score = 2443 (865.0 bits), Expect = 9.7e-254, P = 9.7e-254
Identities = 522/1125 (46%), Positives = 709/1125 (63%)
Query: 7 AQSSSNTGKSRHSARVIAQTTIDAKLHADFETS-GTSFDYSNSVRVSSTAGGDQQPRSDR 65
+ S+++ K + AQ ++DA L ADF S T ++ S V S + P D
Sbjct: 6 SSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPP--NHVP--DE 61
Query: 66 VTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV---GDHP- 121
TAYL +IQ+G L+QPFGCL+A++E +F+++ S+N+ + L +++ +PS G+
Sbjct: 62 HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLS--LPSTSHSGEFDK 119
Query: 122 VLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
V G IG D +T+FT S ++L KA F E+SLLNP+LVH +T+ KPFYAI+HR+ +++
Sbjct: 120 VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 179
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
D EP K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTGYDRVM
Sbjct: 180 DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 239
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A VKV
Sbjct: 240 VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 299
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKRKR 360
+Q E+L L L STLRAPH CH QYM NM S+ASL +A+VV G ++ +
Sbjct: 300 VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVK-----GKDS-----SK 349
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTLLCDML
Sbjct: 350 LWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDML 409
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD-ST 479
+RD IVTQSP IMDLVKCDGAAL YK K W +GVTPN+ Q+ D+V+WL E H D ST
Sbjct: 410 LRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDST 469
Query: 480 GLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKD 539
GL+ DS VCG+AA S KD + WFRS TAS ++WGGAKH P +KD
Sbjct: 470 GLTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKD 529
Query: 540 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSK 599
D +MHPRSSF AFLEV K+RSLPW+ E+DAIHSL+LI+R +F T S +
Sbjct: 530 DAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF----TSSRPVLSGNGV 585
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
D EL + EMVR+IETAT PI VD G +NGWN K AE+TGL +A+GK
Sbjct: 586 ARDAN-----ELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGK 640
Query: 660 HFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVNACASR 715
+V++ S ++ +L ALQG+EE+++ +++ G + D + ++VN+C SR
Sbjct: 641 SLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSR 700
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D +N++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE C EWN
Sbjct: 701 DYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWN 760
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD-PEKVP 834
AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++G + PE
Sbjct: 761 AAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIAGDNVPESSL 817
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FF + GKY E L NK + EG V F FLQ+ + E L L E + L
Sbjct: 818 VEFFNKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKESA--QSLN 873
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXX 954
L Y +++I+NPL+GI F+ K++E +E+ A Q++ L TS C++Q+
Sbjct: 874 ELTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEE 933
Query: 955 XXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
E EF L +L ISQVM+ + ++ E AE+I + L GD ++LQ +LAD
Sbjct: 934 GKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILAD 993
Query: 1015 FLSISINFVP--N---GGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMF 1069
L +N P N G + L++D G+ +HL + R+ H G G+P +L MF
Sbjct: 994 LLRNIVNHAPFPNSWVGISISPGQELSRDN-GRYIHLQF---RMIHPGKGLPSEMLSDMF 1049
Query: 1070 GS-EGDTSEEGISLLISRKLVKLMNGDVQYLREAGKSTFIVSVEL 1113
+ +G + +G+ L +SRKL++ MNG V Y+RE + F V +++
Sbjct: 1050 ETRDGWVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFFQVDLQV 1094
>UNIPROTKB|Q55168 [details] [associations]
symbol:cph1 "Phytochrome-like protein cph1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009585 "red, far-red light
phototransduction" evidence=IDA] [GO:0009639 "response to red or
far red light" evidence=IDA] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IDA] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0046777 "protein
autophosphorylation" evidence=IDA] InterPro:IPR003018
InterPro:IPR000014 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065
SMART:SM00091 SMART:SM00387 SMART:SM00388 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0046777
GO:GO:0023014 GO:GO:0018298 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0004673 GO:GO:0000160 EMBL:BA000022 GenomeReviews:BA000022_GR
BRENDA:2.7.13.3 GO:GO:0008020 GO:GO:0009883 PIR:S74389
RefSeq:NP_442237.1 RefSeq:YP_005652297.1 PDB:2VEA PDB:3ZQ5
PDBsum:2VEA PDBsum:3ZQ5 ProteinModelPortal:Q55168 IntAct:Q55168
STRING:Q55168 GeneID:12253516 GeneID:952560 KEGG:syn:slr0473
KEGG:syy:SYNGTS_2344 PATRIC:23842112 eggNOG:COG4251
HOGENOM:HOG000030537 KO:K11354 OMA:PESDIPQ ProtClustDB:CLSK893476
EvolutionaryTrace:Q55168 Uniprot:Q55168
Length = 748
Score = 590 (212.7 bits), Expect = 1.9e-56, P = 1.9e-56
Identities = 184/650 (28%), Positives = 301/650 (46%)
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
I LIQP G ++ L E + S N +L G P +G + +F
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGIL----------GRSPEDLLGRTLGEVF 69
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFY---AIVHRVT-GSLIIDFEPVKPYE 189
+ +Q L G++S LNP + + G F + HR + G L+ + EP +
Sbjct: 70 DSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSD 129
Query: 190 -VPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
+P L Y +A A+ RL+ ++ D +++EV +TG+DRVM Y+F E++
Sbjct: 130 NLPF-----LGFYHMANAALNRLRQ--QANLRDFYDVIVEEVRRMTGFDRVMLYRFDENN 182
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK----VLQDE 304
HG+V++E + +EPYLGLHYP +DIPQ AR LF+ N +R+I D V V
Sbjct: 183 HGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPST 242
Query: 305 KLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKRKRLWGL 364
DLT S LR+ + CHL Y++NM ASL ++++ K LWGL
Sbjct: 243 NRAVDLT--ESILRSAYHCHLTYLKNMGVGASLTISLI--------------KDGHLWGL 286
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
+ CH+ TP+ +PF LR ACEF +V +++ + + E + + +L D + A
Sbjct: 287 IACHHQTPKVIPFELRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAA 346
Query: 425 PL--GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
G+ ++ L GAA+ + K+ +G TP++ + ++ WL + +
Sbjct: 347 DFVEGLTNHPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENREVQDVFFT 406
Query: 483 ADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE--KDD 540
S V G+ A+ I+ + + WFR + V WGG + E ++D
Sbjct: 407 --SSLSQIYPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQED 464
Query: 541 GR-KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ-----LILRNAFKDVGTL--DLD 592
G+ ++HPR SF + E+V+ +SLPW+ E+ + +L+ LILR A +++ L +L+
Sbjct: 465 GKIELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQA-EELAQLARNLE 523
Query: 593 TKSIH-SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVD----VDGLVNG---WNTK 644
+ K + ++E S V+L+E L D +D V G T
Sbjct: 524 RSNADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTL 583
Query: 645 IAE-LTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEI 693
I + LT VD + T V++ V + L Q EE + E+
Sbjct: 584 IDDILTYAKVDTQYAQLTFTDVQE----VVDKALANLKQRIEESGAEIEV 629
>UNIPROTKB|Q4K656 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0009639
"response to red or far red light" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0009639 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0018298 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 OMA:NWLRIIP ProtClustDB:CLSK412238
RefSeq:YP_262277.1 ProteinModelPortal:Q4K656 STRING:Q4K656
GeneID:3479601 KEGG:pfl:PFL_5200 PATRIC:19879863
BioCyc:PFLU220664:GIX8-5240-MONOMER Uniprot:Q4K656
Length = 746
Score = 419 (152.6 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
Identities = 127/490 (25%), Positives = 230/490 (46%)
Query: 104 PEL-LTMVNHAVPSVGDHPVLGI-GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCK 161
PEL + ++ V ++ P + G ++ + +++ L +S P+ H
Sbjct: 39 PELRIQQISANVEALLGQPAAQVLGQPLEQLLGDTDGQRIREVLQLPRLSDAPPL--HLA 96
Query: 162 TSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMER 221
+G F ++HR G L+++ E + P Q+ L + + RLQ+ + ++
Sbjct: 97 VNGARFEGLLHRHQGVLMLELEIQLEHLQPQHLKE--QTENLG-RLLRRLQT--AKTLNE 151
Query: 222 LCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFL 281
L + E+ +TGYDRV+ Y+F E+ HG+V++E T+ +E + GL +PA+DIPQ AR L
Sbjct: 152 LYAISVSEIQAMTGYDRVLIYRFEEEGHGQVIAEATRPTMEVFNGLFFPASDIPQQAREL 211
Query: 282 FMKNKVRMIVDCRARHVKVLQ----DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASL 337
+ N +R+I + + V +L D + DL+ +TLR+ H QYM+NM ++S+
Sbjct: 212 YRSNWLRIIPNADYQPVPLLPALRPDTQQALDLSF--ATLRSVSPIHCQYMKNMGVLSSM 269
Query: 338 VMAVVVNDXXXXGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVN-- 395
++++ D +LWGL+ C N P VP LR AC+ + QV ++ ++
Sbjct: 270 SISLLKGD--------------QLWGLISCGNRQPLLVPHELRIACQTIGQVLSLQISAM 315
Query: 396 KELELEYQILEKNILRTQTLLCDMLMRDAPLGI---VTQSPNIM-DLVKCDGAALLYKNK 451
+ L++ Q EK + +L D MRD P + + Q P ++ DL + G A++ +
Sbjct: 316 EALDISRQREEK-VTALASL--DQAMRDTPDSVFDGLAQVPQLLLDLTQAGGVAIIEDKQ 372
Query: 452 IWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRI-S 510
+ G P ++ + WL + A V G+ A+ +
Sbjct: 373 LHCFGNCPPQDEIRALHRWLQG---TGQAVFASHHLANVYPPAASYQQVASGVLAMTLPK 429
Query: 511 PKDM-IFWFRSQTASEVRWGGAKHEP---DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKD 566
P D + WFR + + W G +P + D G ++ PR+SF+ + + S W
Sbjct: 430 PVDNGVLWFRPEVKENINWSGNPQKPLDLENSDAGLRLRPRTSFEIWKVEMAGISTKWSH 489
Query: 567 YEMDAIHSLQ 576
+ A + L+
Sbjct: 490 GDRFAANDLR 499
Score = 93 (37.8 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 56/274 (20%), Positives = 108/274 (39%)
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQP G LL L E ++ S N LL G +G ++ +
Sbjct: 27 IQPHGVLLTLSEPELRIQQISANVEALL----------GQPAAQVLGQPLEQLLGDTDGQ 76
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE----PVKPYEVPMTAA 195
+++ L +S P+ H +G F ++HR G L+++ E ++P +
Sbjct: 77 RIREVLQLPRLSDAPPL--HLAVNGARFEGLLHRHQGVLMLELEIQLEHLQPQHLKEQTE 134
Query: 196 --GALQSYKLAAKAITRLQSLPSGSMERLC--DTMIQEVFELTGYDRVMAYKFHEDDHGE 251
G L AK + L ++ ++ + D ++ FE G+ +V+A +
Sbjct: 135 NLGRLLRRLQTAKTLNELYAISVSEIQAMTGYDRVLIYRFEEEGHGQVIA------EATR 188
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
E+ P + A ++ ++ + N V + D + DL+
Sbjct: 189 PTMEVFNGLFFPASDIPQQARELYRSNWLRIIPNADYQPVPLLPA---LRPDTQQALDLS 245
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVND 345
+TLR+ H QYM+NM ++S+ ++++ D
Sbjct: 246 F--ATLRSVSPIHCQYMKNMGVLSSMSISLLKGD 277
Score = 82 (33.9 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 1004 DSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEP 1063
D RL QVL++ + +I F P G++ V + +Q+ SV +G GIP
Sbjct: 637 DPERLFQVLSNLVGNAIKFTPKQGKVGVVAMSDGEQIVFSVR---------DSGEGIPTD 687
Query: 1064 LLDQMFG-----SEGDTSEEGISLLISRKLVKLMNGDVQYLREAGK-STFIVSVELAA 1115
L +F EG+ + G+ L I++ ++ G ++ E GK S F SV A+
Sbjct: 688 QLPFIFDRYWTMKEGNPNGTGLGLYITQGIIHAHGGKIEAHSEVGKGSEFRFSVPRAS 745
Score = 48 (22.0 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 865 FCFLQLASHELQQALHVQRLSEQTALK-RLKALAYTKRQIRNPLSGIIFSRKMME 918
F L L+ L Q L EQ A++ R + +A +RNP++ I MM+
Sbjct: 493 FAANDLRRSALEHDLARQVLREQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQ 547
>UNIPROTKB|Q48G81 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0009639 "response to red or far red light"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR003018 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0009639 GO:GO:0005622 GO:GO:0018298
GO:GO:0000156 EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 RefSeq:YP_275602.1 ProteinModelPortal:Q48G81
STRING:Q48G81 GeneID:3556653 KEGG:psp:PSPPH_3446 PATRIC:19976304
OMA:NWLRIIP ProtClustDB:CLSK412238 Uniprot:Q48G81
Length = 745
Score = 394 (143.8 bits), Expect = 6.9e-38, Sum P(2) = 6.9e-38
Identities = 127/497 (25%), Positives = 232/497 (46%)
Query: 97 IAYSENAPEL-LTMVNHAVPSVGDH-PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLN 154
+ ++ P L + V+ V SV H P +G + + A A ++ A
Sbjct: 32 LLFTLEEPNLTILQVSANVQSVLGHAPEHVLGKGLDHVLGAGWAEVIRSASAHDSFVDAQ 91
Query: 155 PILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL 214
+L+ +G F A++HR G L+++ E + A A+ + L+ L
Sbjct: 92 RLLM--TVNGIEFEALMHRNQGVLVLELE------IQDKDAQAVSYTERTGNMGRMLRQL 143
Query: 215 PSGS-MERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATD 273
+ S ++ L + ++E+ +TGYDRV+ Y+F E+ HG+V++E + +E + GL +PA+D
Sbjct: 144 HAASDLQTLYEVSVREIQRMTGYDRVLIYRFEEEGHGQVIAEASAPSMELFNGLFFPASD 203
Query: 274 IPQAARFLFMKNKVRMIVDCRARHVKVLQ----DEKLPFDLTLCGSTLRAPHSCHLQYME 329
IP+ AR L+ +N +R+I D V ++ D + DL+ STLR+ H QYM+
Sbjct: 204 IPEQARELYRRNWLRIIPDADYTPVPLVPQLRPDTQQQLDLSF--STLRSVSPIHCQYMK 261
Query: 330 NMNSIASLVMAVVVNDXXXXGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQV 389
NM ++S+ ++++ +LWGL+ C + TP +V LR AC+ + QV
Sbjct: 262 NMGVLSSMSVSLIQGG--------------KLWGLISCGHRTPLYVSHELRSACQAIGQV 307
Query: 390 FAIHVN--KELELEYQILEKNILRTQTLLCDMLMRDAPL--GIVTQSPNIMDLVKCDGAA 445
++ ++ + LE+ Q E + + L M + + G+ Q +MDLV G A
Sbjct: 308 LSLQISAMEALEISRQ-REAKVRALEQLHQAMAESEENVFDGLAQQPQLLMDLVGATGVA 366
Query: 446 LLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSXXXXXXXXXXXXXXVVCGMA 505
++ + G P + + +W+ + A V G+
Sbjct: 367 IIEDRQTHCYGACPEVSDIRALHTWMIA---GGEPVYASHHLSSVYAPGEAYQPVASGVL 423
Query: 506 AVRI-SPKDM-IFWFRSQTASEVRWGGAKHEP---DEKDDGRKMHPRSSFKAFLEVVKTR 560
A+ + P D + WFRS+ V+W G ++P + + G ++ PR+SF+ + +V T
Sbjct: 424 AMNLPKPVDNGVIWFRSEVKESVQWSGDPNKPLNMESSEGGMRLRPRTSFEIW-KVEMTG 482
Query: 561 SLP-WKDYEMDAIHSLQ 576
P W ++ A + L+
Sbjct: 483 IAPKWSHGDVFAANDLR 499
Score = 95 (38.5 bits), Expect = 6.9e-38, Sum P(2) = 6.9e-38
Identities = 60/265 (22%), Positives = 107/265 (40%)
Query: 864 VFCFLQLASHELQQALHVQRLSEQTALK-RLKALAYTKRQIRNPLSGIIFSRKMMEGT-- 920
VF L L+ L Q EQ A++ R + +A +RNP++ I MM+ +
Sbjct: 492 VFAANDLRRSALENDLASQVRKEQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQKSFS 551
Query: 921 ELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQ---V 977
G R + T+ +Q T + V+ I +
Sbjct: 552 SDGPHTSRRISTAIDTMQQAASRMNVLLEDLLDTSKIEAGRYTITPQPLEVSQIFEEAYT 611
Query: 978 MMKSNA--KGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSL 1035
++ A K I I + AE + + D RL QVL++ + +I F P G++ V++
Sbjct: 612 LLAPLAMDKSIEI-SFNAEPDLK--VQADPERLFQVLSNLIGNAIKFTPKLGKIGVAA-- 666
Query: 1036 TKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFG-----SEGDTSEEGISLLISRKLVK 1090
+ + + + +G GIP L +F EG+ + G+ L IS+ ++K
Sbjct: 667 ----MSNGTEIVFT---VRDSGEGIPPEQLPHIFERYWTVKEGNPTGTGLGLYISQGIIK 719
Query: 1091 LMNGDVQYLREAGK-STFIVSVELA 1114
G++ + G+ S F +V +A
Sbjct: 720 AHGGELGAQSQLGEGSEFRFTVPIA 744
>UNIPROTKB|Q7CY45 [details] [associations]
symbol:Atu1990 "Bacteriophytochrome protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0004673 "protein histidine
kinase activity" evidence=TAS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=TAS] [GO:0019922
"protein-chromophore linkage via peptidyl-cysteine" evidence=IDA]
InterPro:IPR003018 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 SMART:SM00065 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673
GO:GO:0000160 EMBL:AE007869 GenomeReviews:AE007869_GR GO:GO:0008020
GO:GO:0009883 KO:K00936 eggNOG:COG4251 HOGENOM:HOG000030537
RefSeq:NP_354963.2 ProteinModelPortal:Q7CY45 STRING:Q7CY45
GeneID:1134028 KEGG:atu:Atu1990 PATRIC:20813753 OMA:PVHLQYM
GO:GO:0019922 Uniprot:Q7CY45
Length = 736
Score = 416 (151.5 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 125/415 (30%), Positives = 193/415 (46%)
Query: 172 HRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG-SMERLCDTMIQEV 230
HR +G+L+I EV G + KL + + + L S S+E Q V
Sbjct: 95 HR-SGTLVI-------LEVEKAGVGE-SAEKLMGELTSLAKYLNSAPSLEDALFRTAQLV 145
Query: 231 FELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMI 290
++G+DR + Y F D G VV+E L YLGL +PA DIP AR L+ N++RMI
Sbjct: 146 SSISGHDRTLIYDFGLDWSGHVVAEAGSGALPSYLGLRFPAGDIPPQARQLYTINRLRMI 205
Query: 291 VDCRARHVKVLQDEKLPFD--LTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXX 348
D + V + + L + S LR+ HL+YM NM + AS+ +++VVN
Sbjct: 206 PDVDYKPVPIRPEVNAETGAVLDMSFSQLRSVSPVHLEYMRNMGTAASMSVSIVVNGA-- 263
Query: 349 XGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKN 408
LWGL+ CH+ TP V +R AC+F AQ+ ++ + E +
Sbjct: 264 ------------LWGLIACHHATPHSVSLAVREACDFAAQLLSMRIAMEQSSQDASRRVE 311
Query: 409 ILRTQT-LLCDMLMR----DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQ 463
+ Q LL M D LG + +++ V DGAAL+ + +G TP+ Q
Sbjct: 312 LGHIQARLLKGMAAAEKWVDGLLGGEGEREDLLKQVGADGAALVLGDDYELVGNTPSREQ 371
Query: 464 LHDIVSWLSEYHMDSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPK--DMIFWFRSQ 521
+ +++ WL E + + A V G+ A+R+S + WFR +
Sbjct: 372 VEELILWLGEREI--ADVFATDNLAGNYPTAAAYASVASGIIAMRVSELHGSWLIWFRPE 429
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ 576
VRWGG H+ + + GR +HPR SF+ + E ++ S PW + E+ A L+
Sbjct: 430 VIKTVRWGGDPHKTVQ-ESGR-IHPRKSFEIWKEQLRNTSFPWSEPELAAARELR 482
Score = 47 (21.6 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 80 IQPFGCLLALDEKTFKVIAYSEN 102
IQ G LL L + F V+ S+N
Sbjct: 22 IQEHGALLVLSAREFSVVQASDN 44
>ASPGD|ASPL0000049609 [details] [associations]
symbol:fphA species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0000909 "sporocarp
development involved in sexual reproduction" evidence=IMP]
[GO:0031517 "red light photoreceptor activity" evidence=IDA]
[GO:0010913 "regulation of sterigmatocystin biosynthetic process"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0071491
"cellular response to red light" evidence=IMP;IDA] [GO:1900198
"positive regulation of penicillin biosynthetic process"
evidence=IMP] [GO:0042318 "penicillin biosynthetic process"
evidence=IMP] [GO:1900376 "regulation of secondary metabolite
biosynthetic process" evidence=IMP] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IEA] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR003018 InterPro:IPR001294
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR009082 InterPro:IPR013515 InterPro:IPR013654
InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 SMART:SM00065 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:BN001307
GO:GO:0005622 GO:GO:0023014 EMBL:AACD01000168 GO:GO:0018298
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 RefSeq:XP_682277.1
ProteinModelPortal:G5EB62 EnsemblFungi:CADANIAT00007846
GeneID:2868257 KEGG:ani:AN9008.2 HOGENOM:HOG000171704 OMA:KELTGFH
Uniprot:G5EB62
Length = 1280
Score = 343 (125.8 bits), Expect = 6.0e-28, Sum P(4) = 6.0e-28
Identities = 115/421 (27%), Positives = 201/421 (47%)
Query: 171 VHRVTGSLIIDFEPVKPYEVPMTAAG---ALQSYKLAAKAITRLQSLPSGSMERLCDTMI 227
+ ++ GS I +P++ G A++ + + ++ +L + +ME L DT
Sbjct: 346 IEQMAGSTITINQPLRVLRRARRRKGEAAAMEVFSIVSQIQEQLAR--ADNMEALLDTTS 403
Query: 228 QEVFELTGYDRVMAYKFHEDDHGEVVSEITKS--GLEPYLGLHYPATDIPQAARFLFMKN 285
V ELTG+ R++ Y+F + +G+VVSE+ ++ + GLH+PA DIP+ AR L+ N
Sbjct: 404 GIVKELTGFHRILVYQFDSEFNGKVVSELVDPTMSIDLFKGLHFPAADIPKQARDLYRIN 463
Query: 286 KVRMIVD---CRARHV-KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAV 341
KVR++ D AR V + L+D + P D+T + LRA H++Y+ NM +S M++
Sbjct: 464 KVRLLYDRDHVTARLVCRALEDLETPLDMT--HAYLRAMSPIHIKYLANMQIRSS--MSI 519
Query: 342 VVNDXXXXGDNTLPQKRKRLWGLVVCHNTTPRF--VPFPLRYACEFLAQVFAIHVNKELE 399
+N D LWGL+ CH+ PR V FP+R C + + ++ + L
Sbjct: 520 SINSM---ND---------LWGLISCHSYGPRGMRVSFPIRKMCRLIGDTVSRNIER-LS 566
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
++ + ++ T + D + IV S +++ LV D AL + ++ L +P
Sbjct: 567 YASRLQARKLINT--VPTDA---NPSGYIVASSDDLLRLVDADYGALCIRGEVKILAKSP 621
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPK--DMIFW 517
++ ++ +L +S S + G+ V +S D I +
Sbjct: 622 QSQEMLALLEYLKVRKYNSVLTSNHIVKDFQDLNYPPGFKDISGLLYVPLSTDGLDFIVF 681
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FR +EV+WGG +E + +G + PR SF+ + E V R W + E+D L L
Sbjct: 682 FRRGQLTEVKWGGNPNEA-KFTEGH-LEPRKSFQTWRETVLDRCRDWTESEVDTAAVLCL 739
Query: 578 I 578
+
Sbjct: 740 V 740
Score = 69 (29.3 bits), Expect = 6.0e-28, Sum P(4) = 6.0e-28
Identities = 33/185 (17%), Positives = 76/185 (41%)
Query: 886 EQTALKRLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXX 944
E ++L +L LA + ++R PL+ I+ + +EG G + L + + + ++
Sbjct: 756 ESSSLTKL-LLANSAHEVRTPLNAIVNYLEIALEGALDGETRDHLSKSYSASKSLIYVIN 814
Query: 945 XXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGD 1004
+ F L + + ++ KG+ ++ + ET+ GD
Sbjct: 815 DLLDLTNVEKGQSLIKDEPFDLPTTFSEATAMFESEAKRKGLNY-KVLSQPGIPETVIGD 873
Query: 1005 SIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPL 1064
R++Q +++ +S ++ +GG V+ + A +++ + G GI
Sbjct: 874 QRRVRQSISNLISNAVQNTSSGG---VTVEVWHAPGEGDTDKATVKIAVLDTGRGISSST 930
Query: 1065 LDQMF 1069
L+ +F
Sbjct: 931 LELLF 935
Score = 48 (22.0 bits), Expect = 6.0e-28, Sum P(4) = 6.0e-28
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 1074 DTSEEGISLLISRKLVKLMNGDVQYLREAGK-STFIVSVE 1112
D + G+ L + ++V+ M+G + E GK S F +S++
Sbjct: 968 DKAVLGLGLALVARIVRNMHGQLTVRSEEGKGSRFQISLQ 1007
Score = 40 (19.1 bits), Expect = 6.0e-28, Sum P(4) = 6.0e-28
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 80 IQPFGCLLALDEKTFK---VIAYSENAPELL 107
IQ FG L+A+ E+ + V SEN+ ++L
Sbjct: 206 IQSFGALVAVREEPGEQMVVRIVSENSQDIL 236
>UNIPROTKB|G4MU11 [details] [associations]
symbol:MGG_12377 "Phytochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360
Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 PROSITE:PS50112 SMART:SM00065
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0023014 GO:GO:0018298 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0043581 EMBL:CM001232
GO:GO:0008020 RefSeq:XP_003715418.1 ProteinModelPortal:G4MU11
EnsemblFungi:MGG_12377T0 GeneID:5050971 KEGG:mgr:MGG_12377
Uniprot:G4MU11
Length = 1523
Score = 325 (119.5 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 106/395 (26%), Positives = 188/395 (47%)
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGA+Q + + ++ +L + + ++E+ ++ V ELTG+ RVM Y+F + +G VV+
Sbjct: 463 AGAMQIFDIMSQVQEQLAT--ADNLEKFLKILVGIVSELTGFHRVMIYQFDSEFNGRVVT 520
Query: 255 EI--TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC---RARHV-KVLQDEKLPF 308
E+ T + Y GLH+PA+DIP+ AR L+ NKVR++ D AR V + +D P
Sbjct: 521 ELVDTAQTRDLYKGLHFPASDIPKQARDLYKINKVRLLYDRDQPTARLVCRSTEDLDKPL 580
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKRKRLWGLVVCH 368
DLT S LRA HL+Y+ NM +S+ +++ D LWGL+ CH
Sbjct: 581 DLT--HSYLRAMSPIHLKYLNNMAVRSSMSISIKAFD--------------ELWGLIACH 624
Query: 369 NTTPRF--VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL 426
+ PR V FP+R C + + ++ + L ++ + ++ T + D ++
Sbjct: 625 SYGPRGMRVSFPIRKMCRLVGDTASRNIER-LSYASRLQARKLINT--VPTD---KNPSG 678
Query: 427 GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSX 486
IV S +++ L D A+ + + LG + ++ ++ +L S S D
Sbjct: 679 YIVASSDDLLKLFDADFGAVSIRGETKILGKPESTQEILVLLEYLRMKKFTSVLTSQDLT 738
Query: 487 XXXXXXXXXXXXXVVCGMAAVRISP--KDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK- 543
++ G+ V +S D I +FR +V+W G +E ++ +
Sbjct: 739 VDFADLRYAPGFQMIAGVLYVPLSVGGNDFIVFFRQGQVRQVKWAGNPYEKVVQEGTQHY 798
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
+ PR SFK + E V + W + +++ L L+
Sbjct: 799 LEPRKSFKVWHETVVGKCRDWSEEQVETAAVLCLV 833
Score = 77 (32.2 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 42/188 (22%), Positives = 78/188 (41%)
Query: 886 EQTALKRLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXX 944
+ + L +L LA + ++R PL+ II + +EG+ L E + L S + L
Sbjct: 849 QSSKLTKL-LLANSAHEVRTPLNAIINYLEIALEGS-LDQETRDNLSKSHSASKSL--IY 904
Query: 945 XXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVM--MKSNAKGIRIVNETAEQI-MSETL 1001
E+++ + + L A I + S+AK I E E + +
Sbjct: 905 VINDLLDLTKAEEGQELIKDEIFD-LPACIHEATESFTSDAKRKGIGYEVIEHPGLPRAV 963
Query: 1002 YGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIP 1061
YGD +++Q +A+ ++ N V + Q V ++ H +E+ + G G+
Sbjct: 964 YGDQRKVRQAVAN---VTANAVQHTSQGFVKIEFYVVEVDVEQHKVKVEIAVQDTGSGMS 1020
Query: 1062 EPLLDQMF 1069
LD +F
Sbjct: 1021 NAQLDALF 1028
Score = 50 (22.7 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 1079 GISLLISRKLVKLMNGDVQYLREAGK-STFIV 1109
G+ + + ++V+ MNG ++ E GK S F++
Sbjct: 1062 GLGIAVVGRIVRNMNGQLRLKSEVGKGSRFVM 1093
Score = 47 (21.6 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 80 IQPFGCLLAL--DEKTFKVIAY-SENAPELL 107
+Q FG L+AL DE ++ Y SEN +L
Sbjct: 290 VQGFGALVALAEDENGCHLVRYASENTKHIL 320
Score = 41 (19.5 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 774 WNPAMV-KLTGWKREEVIDKLLLAEVFGTNMACCRLK 809
W+ +V K W E+V +L V+G + R K
Sbjct: 808 WHETVVGKCRDWSEEQVETAAVLCLVYGKFIEVWRQK 844
>UNIPROTKB|Q9KSB0 [details] [associations]
symbol:VC_1349 "Sensory box sensor histidine
kinase/response regulator" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50894
SMART:SM00073 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
InterPro:IPR013656 Pfam:PF08448 PIR:H82211 RefSeq:NP_230993.1
ProteinModelPortal:Q9KSB0 DNASU:2614803 GeneID:2614803
KEGG:vch:VC1349 PATRIC:20081774 OMA:NDSARNI ProtClustDB:CLSK794089
Uniprot:Q9KSB0
Length = 1331
Score = 195 (73.7 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 113/471 (23%), Positives = 193/471 (40%)
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
K++ +F +V S + + + YL LQ + E+ T G +T+ S
Sbjct: 389 KSLNGNF-QVVSTSGVIALNEVYYLPLQVNNQPIALLELGTVGM------LTMQQYHWLS 441
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDK-FTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
+ L D V + ++Q+ Q+ K + + + + + PNP+ +D G
Sbjct: 442 QMLDDLSVAIQ-LSQNAEQQRLAERKVLEQSQLNQEILDATPNPMY--CLSAD--GKFLT 496
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
N + L G EVIDK E+F +A E F VL + S Q+ E
Sbjct: 497 VNAKFLDLMGLYNNEVIDKEP-QEIFPAEVA-------ERFAAAHQVLTQQQSSQNYEVS 548
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQT-ALKR 892
+ G E L+ DR V G+ L + + +++ E A+ +
Sbjct: 549 LVDY---TGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEAADAMSQ 605
Query: 893 LKA--LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL-HTSAQCQRQLHKXXXXXXX 949
K LA +IR P++ I+ + T L Q++ + + + L
Sbjct: 606 AKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDF 665
Query: 950 XXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
E ++F L++VL + V +K+ KGI + + I L GD +RL
Sbjct: 666 SKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLG-LIGDPLRLG 724
Query: 1010 QVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMF 1069
QV+ + ++ F G ++++S+ ++ QL + L + G GI + LD +F
Sbjct: 725 QVMVNLCGNAVKFTSQG-EIVLSARVS--QLNEQQ--VTLRFAVKDTGIGIAQDKLDDLF 779
Query: 1070 G--SEGDTS------EEGISLLISRKLVKLMNGDVQYLREAGK-STFIVSV 1111
S+ D S G+ L IS++LV+LM G + E GK STF SV
Sbjct: 780 DAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSV 830
>TIGR_CMR|VC_1349 [details] [associations]
symbol:VC_1349 "sensory box sensor histidine
kinase/response regulator" species:686 "Vibrio cholerae O1 biovar
El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF01627
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50894 SMART:SM00073 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 PIR:H82211
RefSeq:NP_230993.1 ProteinModelPortal:Q9KSB0 DNASU:2614803
GeneID:2614803 KEGG:vch:VC1349 PATRIC:20081774 OMA:NDSARNI
ProtClustDB:CLSK794089 Uniprot:Q9KSB0
Length = 1331
Score = 195 (73.7 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 113/471 (23%), Positives = 193/471 (40%)
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
K++ +F +V S + + + YL LQ + E+ T G +T+ S
Sbjct: 389 KSLNGNF-QVVSTSGVIALNEVYYLPLQVNNQPIALLELGTVGM------LTMQQYHWLS 441
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDK-FTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
+ L D V + ++Q+ Q+ K + + + + + PNP+ +D G
Sbjct: 442 QMLDDLSVAIQ-LSQNAEQQRLAERKVLEQSQLNQEILDATPNPMY--CLSAD--GKFLT 496
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
N + L G EVIDK E+F +A E F VL + S Q+ E
Sbjct: 497 VNAKFLDLMGLYNNEVIDKEP-QEIFPAEVA-------ERFAAAHQVLTQQQSSQNYEVS 548
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQT-ALKR 892
+ G E L+ DR V G+ L + + +++ E A+ +
Sbjct: 549 LVDY---TGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEAADAMSQ 605
Query: 893 LKA--LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL-HTSAQCQRQLHKXXXXXXX 949
K LA +IR P++ I+ + T L Q++ + + + L
Sbjct: 606 AKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDF 665
Query: 950 XXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
E ++F L++VL + V +K+ KGI + + I L GD +RL
Sbjct: 666 SKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLG-LIGDPLRLG 724
Query: 1010 QVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMF 1069
QV+ + ++ F G ++++S+ ++ QL + L + G GI + LD +F
Sbjct: 725 QVMVNLCGNAVKFTSQG-EIVLSARVS--QLNEQQ--VTLRFAVKDTGIGIAQDKLDDLF 779
Query: 1070 G--SEGDTS------EEGISLLISRKLVKLMNGDVQYLREAGK-STFIVSV 1111
S+ D S G+ L IS++LV+LM G + E GK STF SV
Sbjct: 780 DAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSV 830
>UNIPROTKB|Q1D8M1 [details] [associations]
symbol:MXAN_2785 "Sensory box histidine kinase/response
regulator" species:246197 "Myxococcus xanthus DK 1622" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00072 Pfam:PF00512
Pfam:PF00989 Pfam:PF02518 Pfam:PF08447 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 EMBL:CP000113 GenomeReviews:CP000113_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 InterPro:IPR013656
Pfam:PF08448 RefSeq:YP_631002.1 ProteinModelPortal:Q1D8M1
IntAct:Q1D8M1 STRING:Q1D8M1 GeneID:4101404 KEGG:mxa:MXAN_2785
PATRIC:22648109 OMA:ATHLAVE BioCyc:MXAN246197:GIWU-2762-MONOMER
Uniprot:Q1D8M1
Length = 1077
Score = 176 (67.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 122/530 (23%), Positives = 216/530 (40%)
Query: 615 TSEMVRL-IETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG-KHFLTLVEDSSIDT 672
+ E +R+ + + ++ + + V W+ + + GL K+ K + ++
Sbjct: 426 SEERLRMALAAGQLGVVELQYERGVLSWDERALQHLGLPPGKSPTLKEAAARIHPDDVNR 485
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHG-SKINDDPITLIVNACASRDLHDNVVGVCFVAQDI 731
+R + AL+ E I+ E + G + + ++ ++ D VVG QD+
Sbjct: 486 ARRTIEQALRPGAEA-IRLECRVQGWDGVQRFLLAMVKTHFDAQGQPDRVVGAL---QDV 541
Query: 732 TPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW-NPAMVKLTGWKREEVI 790
T Q++ + R+ IV+ P G + W N A +L G +E I
Sbjct: 542 TEQRSAERERERLA----TIVEQS----PDFIGVGDPSGRAVWVNDAGRRLLGLGLDEDI 593
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA---EC 847
+ L + F L + +V+ I G+ F F A
Sbjct: 594 TRYHLRDFF--------LAEDQTYVDEHIAAAILQGGRREGAFRFRHFPTGEPIAAQYHT 645
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASH---ELQQALHVQRLSEQTA--LKRLKA--LAYTK 900
V R+ + V ++ E ++ L +R++ + A RLK LA
Sbjct: 646 FALVEHDTQRQMGIATVGRDIRAQKRLEAERERLLARERVAREEAEEANRLKDEFLATVS 705
Query: 901 RQIRNPLSGIIFSRKMME-GTELGAEQKRLLHT---SAQCQRQLHKXXXXXXXXXXXXXX 956
++R PL+ ++ +M+ GT +++R L T +A+ Q QL +
Sbjct: 706 HELRTPLTAVLGWVQMLRTGTLPPEKRERALATVERNARAQGQLVEDLLDVSRIMTGKLK 765
Query: 957 XXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
V+ +++V+ A + + + AKGIRI A T+ GD RLQQV+ + L
Sbjct: 766 LDVSSVD--VSQVVEAVLESLRPAAEAKGIRI---QAALDSGGTIMGDVSRLQQVVWNLL 820
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFG----SE 1072
S ++ F P GG++ V ++ SV E+ + G GI L +F ++
Sbjct: 821 SNAVKFTPKGGRVQV----LVERRNSSV-----EITVADTGQGISPQFLPHVFERFRQAD 871
Query: 1073 GDTSEE----GISLLISRKLVKLMNGDVQYLREA-GK-STFIVSVELAAA 1116
G T+ + G+ L I R LV+L G V E G+ +TFIVS+ A A
Sbjct: 872 GSTTRKAGGLGLGLAIVRHLVELHGGTVMATSEGEGRGATFIVSLPQAVA 921
>TIGR_CMR|GSU_1285 [details] [associations]
symbol:GSU_1285 "sensory box sensor histidine
kinase/response regulator" species:243231 "Geobacter sulfurreducens
PCA" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_952338.1
PDB:2R78 PDBsum:2R78 ProteinModelPortal:Q74DN1 SMR:Q74DN1
GeneID:2688111 KEGG:gsu:GSU1285 PATRIC:22025341
HOGENOM:HOG000144300 OMA:AHTNSER
BioCyc:GSUL243231:GH27-1253-MONOMER EvolutionaryTrace:Q74DN1
Uniprot:Q74DN1
Length = 772
Score = 174 (66.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 90/402 (22%), Positives = 166/402 (41%)
Query: 727 VAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKR 786
+A+D++ +K M++ R ++ + + PL PI+ + G N A + TG R
Sbjct: 140 IARDVSERKR-MEESLRSTSEFLDTILDEAPL--PIYITSVDGTLRLANNAWERETGIPR 196
Query: 787 EEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAE 846
+ + L E+F M C +Q + +N +V + A + QD E + FG R +
Sbjct: 197 NAAVGRRL-NELFPAAM-C----DQFSEINRRVVESNATAVQD-EFLDFGAGVRVFHTIK 249
Query: 847 CLL--CVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
L +D G + ++ EL+ A H + A ++ LA +IR
Sbjct: 250 FPLRDAAGGVVDVGGISIDITDRSKMEG-ELRAA-HAAAVDSSRA--KIDFLANMSHEIR 305
Query: 905 NPLSGIIFSRKMMEGTELGAEQKRLLHTSAQ-CQRQLHKXXXXXXXXXXXXXXXXXEMVE 963
P++G+I + +++ T+L Q+ + + + L E V
Sbjct: 306 TPMNGVIGTLELLRETDLDPRQREYAEIARESAESMLAVINMVLDYSKIESHQLVLEAVP 365
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F + E + ++ + KG+ + + + ET+ GD +R Q++A+ + ++ F
Sbjct: 366 FAIREAVERAVKPFRAVAARKGVMVAADVPPHV-PETVVGDPVRFSQIVANLVGNAVKFT 424
Query: 1024 PNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGI-PEP---LLDQMFGSEGDTSE-- 1077
G + + D V + + G GI PE + D ++G T+
Sbjct: 425 EQGAITVQLGAAAVDDCRIDVSCS-----VGDTGAGISPEKFDTIFDPFVQADGSTTRIH 479
Query: 1078 --EGISLLISRKLVKLMNGDVQYLREAGK-STFIVSVELAAA 1116
G+ L I R+LV+ M+G + E G STF V L A
Sbjct: 480 GGTGLGLAIVRRLVEAMDGVISVASEPGMGSTFSFRVRLRGA 521
>UNIPROTKB|P0AEC3 [details] [associations]
symbol:arcB "ArcB sensory histidine kinase - his717
phosphorylated" species:83333 "Escherichia coli K-12" [GO:0009927
"histidine phosphotransfer kinase activity" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA;IDA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA;IDA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA;IDA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046777 "protein autophosphorylation"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
InterPro:IPR013767 InterPro:IPR014409 Pfam:PF00072 Pfam:PF00512
Pfam:PF00989 Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF003182
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50894 SMART:SM00073 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U18997 GO:GO:0046777 GO:GO:0006351 GO:GO:0005622
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0009927 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
Gene3D:1.20.120.160 SUPFAM:SSF47226 EMBL:X53315 PIR:D65112
RefSeq:YP_026207.1 RefSeq:YP_491395.1 PDB:1A0B PDB:1BDJ PDB:1FR0
PDB:2A0B PDB:2KSD PDBsum:1A0B PDBsum:1BDJ PDBsum:1FR0 PDBsum:2A0B
PDBsum:2KSD ProteinModelPortal:P0AEC3 SMR:P0AEC3 DIP:DIP-47915N
IntAct:P0AEC3 MINT:MINT-98513 PRIDE:P0AEC3
EnsemblBacteria:EBESCT00000004707 EnsemblBacteria:EBESCT00000014380
GeneID:12934428 GeneID:947887 KEGG:ecj:Y75_p3130 KEGG:eco:b3210
PATRIC:32121840 EchoBASE:EB0060 EcoGene:EG10062
HOGENOM:HOG000272667 KO:K07648 OMA:ESRNLEN ProtClustDB:PRK11091
BioCyc:EcoCyc:ARCB-MONOMER BioCyc:ECOL316407:JW5536-MONOMER
EvolutionaryTrace:P0AEC3 Genevestigator:P0AEC3 Uniprot:P0AEC3
Length = 778
Score = 173 (66.0 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 86/352 (24%), Positives = 149/352 (42%)
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFV--NLGIVLNKAMSGQDPEK 832
N AM LTG K E+ + L A+V+ A ++ E N+ + + + D K
Sbjct: 181 NRAMELLTG-KSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRK 239
Query: 833 VPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKR 892
F R Y DR G G+ F ++ + Q E+ + +
Sbjct: 240 ACFEI--RKVPY----------YDRVGKRHGLMGF----GRDITERKRYQDALERASRDK 283
Query: 893 LKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL---HTSAQCQRQLHKXXXXXXX 949
++ ++R PL+GI+ +++ TEL AEQ++ L H SA +
Sbjct: 284 TTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDK 343
Query: 950 XXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
+ V+FT + ++S +++ KG+R E + + + D RL+
Sbjct: 344 MERRKVQLDNQPVDFTSFLADLENLSA--LQAQQKGLRFNLEPTLPLPHQVIT-DGTRLR 400
Query: 1010 QVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMF 1069
Q+L + +S ++ F G V+ + D+ G +H + +G GIP+ LD++F
Sbjct: 401 QILWNLISNAVKFTQQG---QVTVRVRYDE-GDMLHF-----EVEDSGIGIPQDELDKIF 451
Query: 1070 G-------SEGD--TSEEGISLLISRKLVKLMNGDVQYLREAGK-STFIVSV 1111
S G + GI L +SR+L K M GD+ E GK STF +++
Sbjct: 452 AMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTI 503
>TIGR_CMR|SO_0859 [details] [associations]
symbol:SO_0859 "sensory box histidine kinase/response
regulator" species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
InterPro:IPR013655 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 Pfam:PF08447 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50885
PROSITE:PS50894 SMART:SM00073 SMART:SM00091 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
RefSeq:NP_716490.1 PDB:3LIC PDBsum:3LIC ProteinModelPortal:Q8EII0
DNASU:1168706 GeneID:1168706 KEGG:son:SO_0859 PATRIC:23521379
HOGENOM:HOG000296662 OMA:IAKPIEV ProtClustDB:CLSK905976
EvolutionaryTrace:Q8EII0 Uniprot:Q8EII0
Length = 1765
Score = 154 (59.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 71/259 (27%), Positives = 115/259 (44%)
Query: 868 LQLASHELQQALHVQRLSEQTALKRLKA--LAYTKRQIRNPLSGIIFSRKMMEGTELGAE 925
L+L S EL A E A + K LA +IR P++ II ++ T+L +
Sbjct: 1019 LKLLSDELLVAK-----DEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQTQLDKK 1073
Query: 926 QKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNA- 983
QK L + + L E V F L+ +L +S + + A
Sbjct: 1074 QKNYLEKIERASQSLLSIINDILDFSKIEAGKLDIENVSFQLDTML-EDLSDMFSERAAQ 1132
Query: 984 KGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQS 1043
K I ++ A + L GD +RL QVL + ++ +I F G ++++S SL + Q
Sbjct: 1133 KQIELLFAVAPNVPRHLL-GDPLRLGQVLINLMNNAIKFTERG-EVLLSLSLVEQQNDDV 1190
Query: 1044 VHLAYLELRITHAGGGIPEPLLDQMFGS--EGDTSEE------GISLLISRKLVKLMNGD 1095
V L + +G G+ + ++F S + DTS G+ L IS++LV+LM G
Sbjct: 1191 V----LRFSVRDSGIGLTQEQQSKLFKSFTQADTSTTRKYGGTGLGLAISKQLVELMGGS 1246
Query: 1096 VQYLREAGK-STFIVSVEL 1113
+ + G STF +V+L
Sbjct: 1247 IGVESQLGHGSTFFFTVKL 1265
Score = 74 (31.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/132 (20%), Positives = 53/132 (40%)
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
+EL + L + AT+ I+ VD+ GL+ N + E GLS D+ ++
Sbjct: 897 EELAVSEAHFKALFDGATIGIVNVDIKGLILDCNYQFCEDMGLSRDELRSTPIFDVLSAQ 956
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
D K ++G+ + + + + + +P+ + VN D +
Sbjct: 957 DKDVAKAQFKELVEGKIDH---YRGERSFVRPSGEPLWMTVNVSTLLDSQNQFESAVVSM 1013
Query: 729 QDITPQKTVMDK 740
D+T K + D+
Sbjct: 1014 VDMTELKLLSDE 1025
Score = 39 (18.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 27/149 (18%), Positives = 66/149 (44%)
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
E+EA ++ + E+ +P + V+ + L+G ++ +G H L+ D +
Sbjct: 767 EIEASRQQLTNITES--IPCTVYQLRW-VSPTDRSFTFLSGAAL-AMLGLHREELLRDFN 822
Query: 670 I------DTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD-NVV 722
I D + + AL G+ + +++ I+ + + I + + D +++
Sbjct: 823 IIAERIFDEERPEVISALAGKSDDQLRW-IREFRYRHPNGGIRWMEAGASGHYADDGSII 881
Query: 723 GVCFVAQDITPQKTVMDKFTRIEGDYKAI 751
+V D+T +K++ ++ E +KA+
Sbjct: 882 WNGYV-MDVTERKSIEEELAVSEAHFKAL 909
>UNIPROTKB|P0AEC5 [details] [associations]
symbol:barA species:83333 "Escherichia coli K-12"
[GO:0009927 "histidine phosphotransfer kinase activity"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0042542 "response to hydrogen peroxide" evidence=IMP]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0071310 "cellular response to organic substance"
evidence=IEP] [GO:0016868 "intramolecular transferase activity,
phosphotransferases" evidence=ISS] [GO:0005887 "integral to plasma
membrane" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA;IDA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA;IDA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046777 GO:GO:0006351 GO:GO:0005622
GO:GO:0042542 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0009927 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 EMBL:D10888 EMBL:U29580
PIR:S20550 RefSeq:NP_417266.1 RefSeq:YP_490994.1
ProteinModelPortal:P0AEC5 SMR:P0AEC5 DIP:DIP-47932N IntAct:P0AEC5
MINT:MINT-1307958 EnsemblBacteria:EBESCT00000000619
EnsemblBacteria:EBESCT00000017432 GeneID:12933292 GeneID:947255
KEGG:ecj:Y75_p2723 KEGG:eco:b2786 PATRIC:32120988 EchoBASE:EB1341
EcoGene:EG11367 HOGENOM:HOG000272329 KO:K07678 OMA:ANQVISQ
ProtClustDB:PRK11107 BioCyc:EcoCyc:BARA-MONOMER
BioCyc:ECOL316407:JW2757-MONOMER Genevestigator:P0AEC5
GO:GO:0071310 InterPro:IPR019247 Pfam:PF09984 Uniprot:P0AEC5
Length = 918
Score = 165 (63.1 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 63/256 (24%), Positives = 114/256 (44%)
Query: 869 QLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQK 927
Q+ ++ L +R E +K + LA ++R PL+G+I F+R ++ TEL Q+
Sbjct: 271 QMEIQNVELDLAKKRAQEAARIKS-EFLANMSHELRTPLNGVIGFTRLTLK-TELTPTQR 328
Query: 928 RLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNAKGI 986
L+T + L E + F L L ++ + S+ KG+
Sbjct: 329 DHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGL 388
Query: 987 RIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHL 1046
+ + + + GD +RLQQ++ + + +I F NG + + K L +
Sbjct: 389 ELTLNIKSDV-PDNVIGDPLRLQQIITNLVGNAIKFTENGN---IDILVEKRALSNTK-- 442
Query: 1047 AYLELRITHAGGGIPEPLLDQMFGS--EGDTSEE------GISLLISRKLVKLMNGDVQY 1098
+E++I G GIPE ++F + + D S G+ L+I++KLV M GD+ +
Sbjct: 443 VQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISF 502
Query: 1099 LREAGK-STFIVSVEL 1113
+ + STF + L
Sbjct: 503 HSQPNRGSTFWFHINL 518
>TIGR_CMR|SPO_0094 [details] [associations]
symbol:SPO_0094 "sensory box sensor histidine
kinase/response regulator" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936
RefSeq:YP_165368.1 ProteinModelPortal:Q5LWQ3 GeneID:3196418
KEGG:sil:SPO0094 PATRIC:23373425 HOGENOM:HOG000014353 OMA:ASTHEMC
ProtClustDB:CLSK933154 Uniprot:Q5LWQ3
Length = 743
Score = 163 (62.4 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 69/275 (25%), Positives = 121/275 (44%)
Query: 855 LDREGAVTGVFCF---LQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII 911
LDR G V + A + ++ + +E+ A + + LA +IR P++G++
Sbjct: 325 LDRNGKVEVTVAIERDVTAAKAQAEELAAARVAAEEGARAKAEFLATMSHEIRTPMNGVV 384
Query: 912 FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLV 971
+++ T+L EQ++ + T L E+ + V
Sbjct: 385 GMAELLSETKLSIEQRQYVDTIRSSSTAL-LAIINDILELSRLDARKMELHPVNFDPVSC 443
Query: 972 ASISQVMMK--SNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQL 1029
+ ++K + AKG+R+ ET + +YGD RL+QVL + L +I F GG
Sbjct: 444 VRDTMRLLKPQAQAKGLRLSLETGADV-PPLVYGDDGRLRQVLINLLGNAIKFTERGGVT 502
Query: 1030 MVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFG----SEGDTSE----EGIS 1081
+ S +D G +L LE+ T G GI ++++F ++ DT+ G+
Sbjct: 503 LRLRSEAQDP-G---YLLTLEVEDT--GIGIAAEKIERVFERFSQADADTTRLYGGTGLG 556
Query: 1082 LLISRKLVKLMNGDVQYLREAGK-STFIVSVELAA 1115
L ISR+LV LM G + G+ S F + + L +
Sbjct: 557 LTISRELVALMGGRITVDSTLGQGSCFTLCLPLGS 591
Score = 50 (22.7 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 616 SEMVRLI-ETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
++++ L+ A ++ D +G + N TG S+D+A G++
Sbjct: 228 AQLLSLVARNANDSVILADSEGRIVWTNESFTRTTGYSLDEAKGRY 273
>UNIPROTKB|Q9KPJ8 [details] [associations]
symbol:VC_2369 "Sensor histidine kinase FexB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0023014 "signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 InterPro:IPR013767
InterPro:IPR014409 Pfam:PF00072 Pfam:PF00512 Pfam:PF00989
Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF003182 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50894
SMART:SM00073 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 KO:K07648 ProtClustDB:PRK11091 HSSP:P22763
PIR:A82085 RefSeq:NP_231999.1 ProteinModelPortal:Q9KPJ8
DNASU:2613038 GeneID:2613038 KEGG:vch:VC2369 PATRIC:20083763
OMA:FDINECI Uniprot:Q9KPJ8
Length = 785
Score = 173 (66.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 97/360 (26%), Positives = 157/360 (43%)
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLK-NQEAFVNLGIVLNKAM 825
EF C N AM +LTG KRE + L +V+ +A ++ +Q+ F N N A+
Sbjct: 176 EFSGC---NRAMEELTG-KRESELVGLTPWDVYRKEIAQSIVETDQQVFNN-----NTAI 226
Query: 826 SGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLS 885
+ + + P G + E L +++G G+ F ++ H + L
Sbjct: 227 TYEQWLEYPDG----RKSFFE--LRKVPFYNKDGRHLGLVGF---GRDITERKRHEESL- 276
Query: 886 EQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXX 945
E+ + + ++ ++R PL+GI+ +M+ T L EQ++ L T L
Sbjct: 277 EKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFN 336
Query: 946 XXXXXXXXXXXXXXEMVEFTLN-EVLVASISQVM-MKSNAKGIRIVNETAEQIMSETLYG 1003
E+ LN E VA I + + + KG+R E + S +
Sbjct: 337 DIIDMDKFDRRKL-ELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPS-LVEV 394
Query: 1004 DSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEP 1063
DS RL+QVL + LS ++ F GG +M S+ Q H A + + + G GIPE
Sbjct: 395 DSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQ-----H-AEITIEVEDTGIGIPEA 448
Query: 1064 LLDQMFG------SEGDTSEE---GISLLISRKLVKLMNGDVQYLREAG-KSTFIVSVEL 1113
+++F S D GI L +SR+L+KLM GD+ E G STF V++ +
Sbjct: 449 EQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTIRV 508
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
EL T+ + I+ + I + G +G N + ELTG + +G
Sbjct: 149 ELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVG 197
>TIGR_CMR|VC_2369 [details] [associations]
symbol:VC_2369 "sensor histidine kinase FexB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 InterPro:IPR013767 InterPro:IPR014409
Pfam:PF00072 Pfam:PF00512 Pfam:PF00989 Pfam:PF01627 Pfam:PF02518
PIRSF:PIRSF003182 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50894 SMART:SM00073 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K07648 ProtClustDB:PRK11091
HSSP:P22763 PIR:A82085 RefSeq:NP_231999.1 ProteinModelPortal:Q9KPJ8
DNASU:2613038 GeneID:2613038 KEGG:vch:VC2369 PATRIC:20083763
OMA:FDINECI Uniprot:Q9KPJ8
Length = 785
Score = 173 (66.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 97/360 (26%), Positives = 157/360 (43%)
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLK-NQEAFVNLGIVLNKAM 825
EF C N AM +LTG KRE + L +V+ +A ++ +Q+ F N N A+
Sbjct: 176 EFSGC---NRAMEELTG-KRESELVGLTPWDVYRKEIAQSIVETDQQVFNN-----NTAI 226
Query: 826 SGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLS 885
+ + + P G + E L +++G G+ F ++ H + L
Sbjct: 227 TYEQWLEYPDG----RKSFFE--LRKVPFYNKDGRHLGLVGF---GRDITERKRHEESL- 276
Query: 886 EQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXX 945
E+ + + ++ ++R PL+GI+ +M+ T L EQ++ L T L
Sbjct: 277 EKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFN 336
Query: 946 XXXXXXXXXXXXXXEMVEFTLN-EVLVASISQVM-MKSNAKGIRIVNETAEQIMSETLYG 1003
E+ LN E VA I + + + KG+R E + S +
Sbjct: 337 DIIDMDKFDRRKL-ELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPS-LVEV 394
Query: 1004 DSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEP 1063
DS RL+QVL + LS ++ F GG +M S+ Q H A + + + G GIPE
Sbjct: 395 DSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQ-----H-AEITIEVEDTGIGIPEA 448
Query: 1064 LLDQMFG------SEGDTSEE---GISLLISRKLVKLMNGDVQYLREAG-KSTFIVSVEL 1113
+++F S D GI L +SR+L+KLM GD+ E G STF V++ +
Sbjct: 449 EQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTIRV 508
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
EL T+ + I+ + I + G +G N + ELTG + +G
Sbjct: 149 ELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVG 197
>TIGR_CMR|CPS_4165 [details] [associations]
symbol:CPS_4165 "sensory box histidine kinase/response
regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0009927 "histidine phosphotransfer kinase
activity" evidence=ISS] InterPro:IPR000014 InterPro:IPR001638
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00497 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50894
SMART:SM00062 SMART:SM00073 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005215 GO:GO:0030288 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 RefSeq:YP_270817.1 ProteinModelPortal:Q47WK5
STRING:Q47WK5 GeneID:3522010 KEGG:cps:CPS_4165 PATRIC:21471191
OMA:GNFIKHN ProtClustDB:CLSK938303
BioCyc:CPSY167879:GI48-4175-MONOMER Uniprot:Q47WK5
Length = 1683
Score = 169 (64.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 104/514 (20%), Positives = 217/514 (42%)
Query: 609 KELEAVTSEMVRLIETATVP-ILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVED 667
KEL A + + +LI ++ IL VD G N ++TG S ++ + ++L
Sbjct: 678 KEL-AASEQKSKLINSSVADGILGVDKLGHFIFANESATKITGYSEEQILSSDLISLFAG 736
Query: 668 SSIDTVK---RMLYLALQGQEEQNIQFE-IKTHGSKINDDPITLIVNACASRDLHDNVVG 723
+ + + +Y A+Q +E I E + G++ + P+ ++ D
Sbjct: 737 DNKENLTFEDTEVYKAIQSKEVIRISNEYVLMSGAR--ELPLEYSISPVED----DESEL 790
Query: 724 VCFVA-QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLT 782
C +A QDIT + + + R+E K + P ++ + +DE + N ++L
Sbjct: 791 ACVIALQDITLR---VQETERLE---KMLEHLPVCMVI-MNQNDEVE---QINQTGIELL 840
Query: 783 GWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNG 842
G++R+E++ + ++F ++++ +A + + + E+ F ++G
Sbjct: 841 GFERDEIVGNPV--DLFIPQE---QVESHKALLKKFFQEETVIDTRSLER-DFKVKHKSG 894
Query: 843 KYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQAL-HVQRLSEQTALKRLKALAYTKR 901
K E G V + + AL +R+S+ + + LA
Sbjct: 895 KLIEIQAVYTPVHFHNGLYAAVMVRDITLDRQAEFALLEAKRISDDASKAKSDFLANMSH 954
Query: 902 QIRNPLSGIIFSRKMMEGTELGAEQKRLL-HTSAQCQRQLHKXXXXXXXXXXXXXXXXXE 960
+IR P++ I+ + G EL + K + + L E
Sbjct: 955 EIRTPMNAIMGMSHLALGCELDRKPKNYVTKVYKAAESLLGIINDILDFSKIEAGKLDIE 1014
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
++EF+L++ + + +K+ K + ++ + + + L GD +RL Q+L + ++
Sbjct: 1015 VIEFSLHDTFADLANIIGLKAGEKNLELLFDISPDV-PVNLKGDPLRLNQILINLAGNAV 1073
Query: 1021 NFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGS--EGDTSEE 1078
F G Q+++S ++ + LE + +G G+ + ++F S + D+S
Sbjct: 1074 KFTEQG-QVVISVNVVTNVSTSHCDDINLEFSVKDSGIGMDDEQQKKLFQSFSQADSSTT 1132
Query: 1079 ------GISLLISRKLVKLMNGDVQYLREAGKST 1106
G+ L IS+KLV+LMNG + +AG+ +
Sbjct: 1133 RKYGGTGLGLTISKKLVELMNGQIWLESKAGEGS 1166
Score = 49 (22.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 47 NSVRVSSTAGGDQQPRSDR----VTTAYLHH--IQKG--KLIQPFGCLLALDEKTFKVIA 98
NS +SS G Q S + +T YL+ ++K K I+P +A+ + I
Sbjct: 168 NSKGLSSNLQGYQSIESGKYDVFITYLYLYKYMLKKHDFKNIKP----IAISQFESLPIG 223
Query: 99 Y--SENAPELLTMVNHAVPSVGDHPVLGIGS 127
+ ++N P+L+ ++N + +GD +L + S
Sbjct: 224 FCVNKNKPQLVGLLNWGIDQLGDDFILAMQS 254
>DICTYBASE|DDB_G0277883 [details] [associations]
symbol:dhkJ "histidine kinase J" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0004673 "protein histidine kinase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0277883
GO:GO:0016021 GO:GO:0005524 GO:GO:0005615 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0005622 GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P39928 eggNOG:COG0784 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 EMBL:AF362372 RefSeq:XP_642053.2
ProteinModelPortal:Q54YZ9 EnsemblProtists:DDB0215385 GeneID:8621265
KEGG:ddi:DDB_G0277883 OMA:ACGDLSK Uniprot:Q54YZ9
Length = 2062
Score = 169 (64.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 69/267 (25%), Positives = 119/267 (44%)
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA--LKRLKA--LAYTKRQIRNPLSGI 910
+D +G V + + H L++ L+++TA R K+ +A +IR P++GI
Sbjct: 1306 VDAKGEVNLLKLIINEMIHNLKETTLKNTLAKETAEAASRAKSDFMANMSHEIRTPMNGI 1365
Query: 911 IFSRKMMEGTELGAEQKRLLH-TSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEV 969
I + TEL AEQ+ L + L + EF+L
Sbjct: 1366 IGMTDLTLDTELTAEQREYLSMVQSSAGSLLTIINDILDFSKIEAGRLELDQAEFSLRAH 1425
Query: 970 LVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQL 1029
L ++ + +++ K I +V + A + ++L GD RL+Q++ + + +I F G
Sbjct: 1426 LYDALKTLSWRAHQKCIELVCDIASDV-PDSLIGDPGRLRQIVNNLVGNAIKFTSQGEVD 1484
Query: 1030 MVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFG--SEGDTS------EEGIS 1081
+V G+ V L+ + G GIP+ L +F S+ D S G+
Sbjct: 1485 LVVKVEKSLSCGEVV----LKFSVIDTGIGIPKDKLHLIFEAFSQADGSITRRYGGTGLG 1540
Query: 1082 LLISRKLVKLMNGDVQYLREAGK-STF 1107
L IS +LV+LM G + + ++GK STF
Sbjct: 1541 LTISTRLVELMKGKLSVVSKSGKGSTF 1567
Score = 50 (22.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 590 DLDTK-SIHSK--LCDLK--IEGM-KELEAVTSEMVRLI-ETATVPILA-----VDVDGL 637
DL K SI ++ +C+LK I M +L++ +SE+ R+ E T IL DV G+
Sbjct: 1023 DLSKKISIDAQGEICELKNTINTMVDQLKSFSSEVTRVAREVGTEGILGGQAEVKDVGGV 1082
Query: 638 VNGW----NTKIAELTG 650
G NT A LTG
Sbjct: 1083 WKGLTDNVNTMAANLTG 1099
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 608 MKELEAVTSEMVRLI-ETATVPILA--VDVDGLVNGW-------NTKIAELTG 650
+++L+ +SE+ R+ E T IL +V G+ W NT A LTG
Sbjct: 493 VQQLKGFSSEVTRVAREVGTKGILGGQAEVTGVGGVWKGLTDNVNTMAANLTG 545
Score = 40 (19.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 610 ELEAVTSEMVRLI-ETATVPILA--VDVDGLVNGW-------NTKIAELTG 650
+L++ +SE+ R+ E T IL +V G+ W NT A LTG
Sbjct: 587 QLKSFSSEVTRVSREVGTEGILGGQAEVTGVDGVWKGLTDNVNTMAANLTG 637
>TIGR_CMR|CPS_4117 [details] [associations]
symbol:CPS_4117 "sensor histidine kinase/response
regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
Gene3D:1.20.120.160 SUPFAM:SSF47226 HOGENOM:HOG000272329 KO:K07678
OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247 Pfam:PF09984
RefSeq:YP_270772.1 ProteinModelPortal:Q47WQ0 STRING:Q47WQ0
DNASU:3518736 GeneID:3518736 KEGG:cps:CPS_4117 PATRIC:21471097
BioCyc:CPSY167879:GI48-4130-MONOMER Uniprot:Q47WQ0
Length = 948
Score = 159 (61.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/245 (24%), Positives = 119/245 (48%)
Query: 870 LASHELQQA-LHVQRLSEQTALKRLKA--LAYTKRQIRNPLSGII-FSRKMMEGTELGAE 925
L E+Q L + + Q A R+K+ LA ++R PL+G+I F+R++++ T L
Sbjct: 280 LEQFEIQNVELSISKRKAQEA-NRVKSEFLANMSHELRTPLNGVIGFTRQVLK-TPLTEN 337
Query: 926 QKRLLHT-SAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAK 984
Q+ L T L E + F+L E + +++ + ++ K
Sbjct: 338 QRDYLQTIDRSANNLLTIINDILDFSKLDAGKMVTENIPFSLRESIDETLTLLAPSAHKK 397
Query: 985 GIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSV 1044
I + + Q + ++L GD++R++Q++ + +S +I F P G V+ +T +++ Q+
Sbjct: 398 NIEL-SINLPQELPDSLVGDTMRIKQIITNLVSNAIKFTPQGS---VAVDITSEEISQN- 452
Query: 1045 HLAYLELRITHAGGGIPEPLLDQMFGS--EGDTS------EEGISLLISRKLVKLMNGDV 1096
++ L++ +T G G+ +F + + D S G+ L+I ++L + MNGD+
Sbjct: 453 NIK-LKVIVTDTGIGMTTNQQRTIFDAFTQADQSITRLYGGTGLGLVICQRLAQEMNGDI 511
Query: 1097 QYLRE 1101
+ E
Sbjct: 512 GFSSE 516
>CGD|CAL0002691 [details] [associations]
symbol:NIK1 species:5476 "Candida albicans" [GO:0009405
"pathogenesis" evidence=IMP] [GO:0004673 "protein histidine kinase
activity" evidence=ISS;IDA] [GO:0007234 "osmosensory signaling via
phosphorelay pathway" evidence=ISS] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=ISS] [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:1900445 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900436 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 GO:GO:1900445 GO:GO:0006355
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0036170
GO:GO:1900436 GO:GO:0007234 EMBL:AACQ01000061 EMBL:AACQ01000060
GO:GO:0097308 RefSeq:XP_716936.1 RefSeq:XP_717003.1
ProteinModelPortal:Q5A599 STRING:Q5A599 GeneID:3641358
GeneID:3641453 KEGG:cal:CaO19.12648 KEGG:cal:CaO19.5181
Uniprot:Q5A599
Length = 1081
Score = 158 (60.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 62/248 (25%), Positives = 110/248 (44%)
Query: 875 LQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSA 934
LQ+ + +E + + LA +IR PL+GII ++ TEL Q+ +L
Sbjct: 484 LQRNTAAREAAELANSAKSEFLANMSHEIRTPLNGIIGMTQLSLDTELTQYQREMLSIVH 543
Query: 935 QCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNAKGIRIVNETA 993
L E ++F+L + ++ + +K+ K + + +
Sbjct: 544 NLANSLLTIIDDILDISKIEANRMTVEQIDFSLRGTVFGALKTLAVKAIEKNLDLTYQ-C 602
Query: 994 EQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTK-DQLGQSVHLAYLELR 1052
+ + L GDS RL+QV+ + +I F G VS S+ K D++ L LE+
Sbjct: 603 DSSFPDNLIGDSFRLRQVILNLAGNAIKFTKEG---KVSVSVKKSDKMVLDSKLL-LEVC 658
Query: 1053 ITHAGGGIPEPLLDQMFGS----EGDTSEE----GISLLISRKLVKLMNGDVQYLREAGK 1104
++ G GI + L +F + +G T+ + G+ L IS++L+ LM G++ E G
Sbjct: 659 VSDTGIGIEKDKLGLIFDTFCQADGSTTRKFGGTGLGLSISKQLIHLMGGEIWVTSEYGS 718
Query: 1105 -STFIVSV 1111
S F +V
Sbjct: 719 GSNFYFTV 726
>UNIPROTKB|Q5A599 [details] [associations]
symbol:NIK1 "Putative uncharacterized protein NIK1"
species:237561 "Candida albicans SC5314" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=ISS] [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0004673 "protein
histidine kinase activity" evidence=ISS;IDA] [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=ISS]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0023014 "signal
transduction by phosphorylation" evidence=ISS] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0035556 "intracellular
signal transduction" evidence=ISS] [GO:0036170 "filamentous growth
of a population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0097308 "cellular response to farnesol" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
GO:GO:0071216 GO:GO:0036180 GO:GO:0009405 GO:GO:1900445
GO:GO:0006355 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0036170 GO:GO:1900436 GO:GO:0007234 EMBL:AACQ01000061
EMBL:AACQ01000060 GO:GO:0097308 RefSeq:XP_716936.1
RefSeq:XP_717003.1 ProteinModelPortal:Q5A599 STRING:Q5A599
GeneID:3641358 GeneID:3641453 KEGG:cal:CaO19.12648
KEGG:cal:CaO19.5181 Uniprot:Q5A599
Length = 1081
Score = 158 (60.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 62/248 (25%), Positives = 110/248 (44%)
Query: 875 LQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSA 934
LQ+ + +E + + LA +IR PL+GII ++ TEL Q+ +L
Sbjct: 484 LQRNTAAREAAELANSAKSEFLANMSHEIRTPLNGIIGMTQLSLDTELTQYQREMLSIVH 543
Query: 935 QCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNAKGIRIVNETA 993
L E ++F+L + ++ + +K+ K + + +
Sbjct: 544 NLANSLLTIIDDILDISKIEANRMTVEQIDFSLRGTVFGALKTLAVKAIEKNLDLTYQ-C 602
Query: 994 EQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTK-DQLGQSVHLAYLELR 1052
+ + L GDS RL+QV+ + +I F G VS S+ K D++ L LE+
Sbjct: 603 DSSFPDNLIGDSFRLRQVILNLAGNAIKFTKEG---KVSVSVKKSDKMVLDSKLL-LEVC 658
Query: 1053 ITHAGGGIPEPLLDQMFGS----EGDTSEE----GISLLISRKLVKLMNGDVQYLREAGK 1104
++ G GI + L +F + +G T+ + G+ L IS++L+ LM G++ E G
Sbjct: 659 VSDTGIGIEKDKLGLIFDTFCQADGSTTRKFGGTGLGLSISKQLIHLMGGEIWVTSEYGS 718
Query: 1105 -STFIVSV 1111
S F +V
Sbjct: 719 GSNFYFTV 726
>TIGR_CMR|SO_4445 [details] [associations]
symbol:SO_4445 "response regulator/sensor histidine kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001638 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497 Pfam:PF00512
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
SMART:SM00062 SMART:SM00073 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005215 GO:GO:0030288
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 RefSeq:NP_719966.1 ProteinModelPortal:Q8E948
GeneID:1172042 KEGG:son:SO_4445 PATRIC:23528543
HOGENOM:HOG000273173 OMA:AYIGNLH ProtClustDB:CLSK641032
Uniprot:Q8E948
Length = 1141
Score = 158 (60.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 62/245 (25%), Positives = 111/245 (45%)
Query: 875 LQQALHVQRLSEQTALKRLKA--LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHT 932
++ AL + + + + A KR KA LA +IR P++G++ + + T LG EQK+++
Sbjct: 544 VENALAIAKENAELATKR-KAEFLAAMSHEIRTPMNGLVGMAEQLSFTPLGIEQKQMVQI 602
Query: 933 -SAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNE 991
S + L E L EVL ++++ VM K + +
Sbjct: 603 ISNGAEEILQIINNILDFSKIDMGKMRLESTPILLREVLDSTLNMVMNDLRTKDLSLYLH 662
Query: 992 TAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
+Q ++ + GDS+R++Q+L +++S +I F G + VS L ++ GQ + L +
Sbjct: 663 V-DQGVAARVTGDSLRIKQILFNWVSNAIKFTERGF-IEVSVKLEAEEEGQQLLL----I 716
Query: 1052 RITHAGGGIPEPLLDQMFG--SEGDTSEE------GISLLISRKLVKLMNGDVQYLREAG 1103
+ G G+ ++F + D S G+ L IS L ++M GD+
Sbjct: 717 GVQDTGIGMNADTQARIFNIFEQADVSTTRSYGGAGLGLAISHTLAEMMGGDIILNSAPH 776
Query: 1104 KSTFI 1108
TFI
Sbjct: 777 LGTFI 781
>TIGR_CMR|GSU_2575 [details] [associations]
symbol:GSU_2575 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF01627
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50894
SMART:SM00073 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 HSSP:P06143 RefSeq:NP_953621.1
ProteinModelPortal:Q74A16 GeneID:2686358 KEGG:gsu:GSU2575
PATRIC:22028003 HOGENOM:HOG000064081 OMA:YLEEANH
BioCyc:GSUL243231:GH27-2552-MONOMER Uniprot:Q74A16
Length = 850
Score = 155 (59.6 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 59/236 (25%), Positives = 109/236 (46%)
Query: 885 SEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKR----LLHTSAQCQRQL 940
+E + + LA +IR PL+GI+ ++ G L Q+ + SA C +
Sbjct: 207 AESASRAKSDFLANMSHEIRTPLNGIMGMTDLLLGGGLNQTQQHQYLGAIKGSADCLMGV 266
Query: 941 HKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSET 1000
+ V F+L + ++ + ++ KG+ +V + E ++ +
Sbjct: 267 --IGDILDFSKIEAGKVELDPVPFSLRTFVGQAVRSLSARAAEKGVELVCDPREDVI-DP 323
Query: 1001 LYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGI 1060
L GD +L+QVL + + +I F +GG+++V+ + G V L + ++ G GI
Sbjct: 324 LIGDCGKLRQVLVNLVGNAIKF-SDGGEVVVAVETAAVE-GNEVLLRF---SVSDQGCGI 378
Query: 1061 PEPLLDQMFG--SEGDTSEE------GISLLISRKLVKLMNGDVQYLREAGK-STF 1107
LD++F + D+S G+ L ISR++V+LM GD++ G+ STF
Sbjct: 379 APEALDRIFNVFEQADSSTTKRFGGTGLGLAISRRIVQLMGGDIRVESAPGEGSTF 434
>TIGR_CMR|GSU_2314 [details] [associations]
symbol:GSU_2314 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 Pfam:PF13188
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50894 SMART:SM00073 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 InterPro:IPR021796 Pfam:PF11845
HSSP:P06143 RefSeq:NP_953363.2 GeneID:2687347 KEGG:gsu:GSU2314
PATRIC:22027483 HOGENOM:HOG000144277 ProtClustDB:CLSK2306793
BioCyc:GSUL243231:GH27-2320-MONOMER Uniprot:Q74AN8
Length = 1025
Score = 147 (56.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 58/232 (25%), Positives = 100/232 (43%)
Query: 876 QQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKR---LLHT 932
++ L + +E + + LA +IR P++G+I ++ T L EQ+R ++ T
Sbjct: 497 EELLLAKEQAESANRAKSEFLANMSHEIRTPMNGVIGMTGLLLETGLADEQRRYAEIVRT 556
Query: 933 SAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNET 992
SA Q+ E + F L +L + K+N KG+
Sbjct: 557 SAASLLQV--IDDILDFSKIEAGRLEMETIGFDLRTLLDDLAESLAFKANEKGLTFTCLL 614
Query: 993 AEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
++ L GD +RL+QVL + ++ F G + SLTK G SV L +
Sbjct: 615 RPEV-PRFLMGDPVRLKQVLVNLAGNALKFTHQGEISVEVGSLTKT--GDSVKLRFA--- 668
Query: 1053 ITHAGGGIPEPLLDQMFG--SEGDTS------EEGISLLISRKLVKLMNGDV 1096
+ G GIP + +F ++ D S G+ L I ++LV++M G++
Sbjct: 669 VRDTGIGIPPEKTELLFEKFTQADASITRKYGGTGLGLAICKRLVQMMGGEI 720
Score = 61 (26.5 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 232 ELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPY 264
EL G + V++ FH DD G ++ +++++ EPY
Sbjct: 299 ELEGIN-VISLLFHPDDIGSMIDKMSRAHSEPY 330
Score = 57 (25.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 39/187 (20%), Positives = 77/187 (41%)
Query: 613 AVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLV---ED-- 667
A + E RL+ + + + G+V N + A+L G ++ G + ++L+ +D
Sbjct: 257 AESEERNRLLSEVALEGIVIHDRGIVQDMNARFAKLFGYPREELEGINVISLLFHPDDIG 316
Query: 668 SSIDTVKRMLYLALQ--GQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S ID + R Q G ++ F+++ G + D VV V
Sbjct: 317 SMIDKMSRAHSEPYQVRGVKKDGTVFDVEIEGYNLQHG------------DKSVRVVSV- 363
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP---LIPPIFGSDEFGWCCEWNPAMVKLT 782
+DIT ++ + + E ++ + ++ +I P+ G+ + N A V
Sbjct: 364 ---RDITERRRAEEALRQSEALFRNLFEHHAAVKLIIDPVSGA-----IVDANNAAVSFY 415
Query: 783 GWKREEV 789
GW RE++
Sbjct: 416 GWSREQL 422
>DICTYBASE|DDB_G0274191 [details] [associations]
symbol:dhkC "histidine kinase C" species:44689
"Dictyostelium discoideum" [GO:0009847 "spore germination"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467
dictyBase:DDB_G0274191 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000151_GR EMBL:AAFI02000012
GO:GO:0005622 GO:GO:0009847 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 HSSP:Q9WZV7
EMBL:AF029726 EMBL:AF361474 PIR:T09057 RefSeq:XP_644273.1
ProteinModelPortal:Q95PI2 EnsemblProtists:DDB0185038 GeneID:8619701
KEGG:ddi:DDB_G0274191 OMA:FENSREL ProtClustDB:CLSZ2846868
Uniprot:Q95PI2
Length = 1225
Score = 156 (60.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 57/227 (25%), Positives = 105/227 (46%)
Query: 884 LSEQTAL--KRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKR---LLHTSAQCQR 938
LS ++ L K + +++ ++R P+ +I S ++ T L Q ++ TSA
Sbjct: 410 LSIESVLNNKSIDMISHLSHELRTPIHSVIASIQLFRSTILTVTQNEYLSIIDTSANTLL 469
Query: 939 QLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMS 998
+L V+F L V+ + V ++ AK ++I +
Sbjct: 470 EL--VSNVLDYKRIRSGKLTLNNVDFNLCHVIEDVCAMVSPQAQAKSLQIASFIFIHCPL 527
Query: 999 ETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGG 1058
+ YGD IRL+QVL + + + + N GQ+ +S + +Q+ + H YL ++ +G
Sbjct: 528 -SFYGDPIRLRQVLLNLIGNGLKYT-NKGQVCIS--VEPEQVNE--HCMYLHFQVKDSGI 581
Query: 1059 GIPEPLLDQMFG-----SEGDTSEE----GISLLISRKLVKLMNGDV 1096
GI E + ++F + G T++E G+ L IS+ LV+LM G +
Sbjct: 582 GIKEENMSKLFAGFSQVNNGGTTQEALGSGLGLAISKDLVELMGGKI 628
>DICTYBASE|DDB_G0277845 [details] [associations]
symbol:dhkB "histidine kinase B" species:44689
"Dictyostelium discoideum" [GO:0016020 "membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0000155
"phosphorelay sensor kinase activity" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0023014
"signal transduction by phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0277845
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0005622 GO:GO:0023014 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 HSSP:Q9WZV7
EMBL:AF024654 PIR:T08875 RefSeq:XP_642228.1
ProteinModelPortal:Q54YH4 EnsemblProtists:DDB0215358 GeneID:8621437
KEGG:ddi:DDB_G0277845 OMA:HWILMES Uniprot:Q54YH4
Length = 1969
Score = 172 (65.6 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 68/270 (25%), Positives = 122/270 (45%)
Query: 854 KLDREGAVTGVFCFLQLASH-ELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K +G V + + +L +A + R +E ++ L ++R P++G++
Sbjct: 922 KATYDGEPVDVISIIDITGRKQLMEADYALRKAEAANEAKVIFLTTVSHELRTPINGVLA 981
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMV--EFTLNEVL 970
S ++E T L + QK L+ L E++ +F++ ++L
Sbjct: 982 SADILERTTLDSTQKEFLNCIKLSGNYL-LDLINDILDYSKIEAGKMEIIKYDFSILKML 1040
Query: 971 VASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM 1030
SI V KG+ + + + GD R++Q+L +FLS SI F N GQ++
Sbjct: 1041 DNSIRIVSKNIYEKGLDLCIFIDPNV-PVIVNGDQRRIKQILLNFLSNSIKFT-NHGQII 1098
Query: 1031 VSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGS-----EGDTSE---EGISL 1082
+ L D S H + ++ + +G GI L+Q+F S G++ + G+ L
Sbjct: 1099 IRVKLESDD---STH-SLIKFDVEDSGIGIKTEHLNQLFASFSQIDSGNSRKYQGTGLGL 1154
Query: 1083 LISRKLVKLMNGDVQYLREAGK-STFIVSV 1111
IS++L K+M GDV+ E G STF ++
Sbjct: 1155 SISKRLCKMMGGDVKVKSEFGVGSTFSFTI 1184
Score = 39 (18.8 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 38 TSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKG 77
TS ++ ++ N R + Q + + Y HHI G
Sbjct: 389 TSASAMNHQNQRRYREHHQINHQQQQQQHHRHYHHHINSG 428
>UNIPROTKB|P16497 [details] [associations]
symbol:kinA "Sporulation kinase A" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR000014 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013767
Pfam:PF00512 Pfam:PF00989 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50112 PROSITE:PS50113 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0030435 GO:GO:0023014
EMBL:AL009126 GenomeReviews:AL009126_GR SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 BRENDA:2.7.13.3 EMBL:AJ222587 EMBL:M29450
EMBL:M31067 PIR:A33496 RefSeq:NP_389282.1 PDB:2VLG PDBsum:2VLG
ProteinModelPortal:P16497 SMR:P16497 DIP:DIP-58966N
EnsemblBacteria:EBBACT00000003684 GeneID:939230 KEGG:bsu:BSU13990
PATRIC:18974581 GenoList:BSU13990 HOGENOM:HOG000008904 KO:K02491
OMA:TQANLNG ProtClustDB:CLSK887211 BioCyc:BSUB:BSU13990-MONOMER
BindingDB:P16497 ChEMBL:CHEMBL3889 EvolutionaryTrace:P16497
Uniprot:P16497
Length = 606
Score = 107 (42.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 70/298 (23%), Positives = 131/298 (43%)
Query: 820 VLNKAMSGQDPEKVPFGFFARNGK--YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQ 877
+ N A + E V +F + Y E ++C+ E AV + L+ S E +Q
Sbjct: 328 IQNIAEQKTESEIVKQSWFTFQNRVIYTE-MVCIPTTFFGEAAVQVI---LRDIS-ERKQ 382
Query: 878 ALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQ 937
+ SE+ ++ A A +IRNPL+ I ++M+ T G E H
Sbjct: 383 TEELMLKSEKLSIAGQLA-AGIAHEIRNPLTAIKGFLQLMKPTMEGNE-----HYFDIVF 436
Query: 938 RQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVM-MKSNAKGIRIVNETAEQI 996
+L + + E+ + L+ +S ++ ++N GI I T+ +
Sbjct: 437 SELSRIELILSELLMLAKPQQNAVKEYLNLKKLIGEVSALLETQANLNGIFI--RTSYEK 494
Query: 997 MSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHA 1056
S + GD +L+QV + + ++ +P+GG V +T+D+ SVH+ +
Sbjct: 495 DSIYINGDQNQLKQVFINLIKNAVESMPDGGT--VDIIITEDE--HSVHVT-----VKDE 545
Query: 1057 GGGIPEPLLDQMFGSEGDTSEE---GISLLISRKLVKLMNGDVQYLREAGKST-FIVS 1110
G GIPE +L+++ G T++E G+ L+++ +++ G + K T F +S
Sbjct: 546 GEGIPEKVLNRI-GEPFLTTKEKGTGLGLMVTFNIIENHQGVIHVDSHPEKGTAFKIS 602
Score = 93 (37.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 42/206 (20%), Positives = 88/206 (42%)
Query: 553 FLEVVKTRSLPWKDYEMDAIHS-LQLILRNAFKDVGTLDLDT--KSIHSKLCDLKIEGMK 609
F + K ++ W + ++ + + + R + L+ +T +S++ + +++ +
Sbjct: 77 FRFIKKDHTIVWVEAAVEIVTTRAERTEREIILKMKVLEEETGHQSLNCEKHEIEPASPE 136
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGL-SVDKAIGKHFLTLVEDS 668
+T + RL+E P L + V G + N+ + + G S D IGK +E+
Sbjct: 137 STTYITDDYERLVENLPSP-LCISVKGKIVYVNSAMLSMLGAKSKDAIIGKSSYEFIEEE 195
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
D VK + +G E I+ K +++ P+ L V A S ++ N +
Sbjct: 196 YHDIVKNRIIRMQKGMEVGMIEQTWK----RLDGTPVHLEVKA--SPTVYKNQQAELLLL 249
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQN 754
DI+ +K + Y+ ++QN
Sbjct: 250 IDISSRKKFQTILQKSRERYQLLIQN 275
>UNIPROTKB|Q9KLK7 [details] [associations]
symbol:luxQ "Autoinducer 2 sensor kinase/phosphatase LuxQ"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0023014 "signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR015387
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF09308 PRINTS:PR00344
ProDom:PD142495 PROSITE:PS50110 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0004721 GO:GO:0016311 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 PIR:C82424
RefSeq:NP_233123.1 PDB:3C30 PDB:3C38 PDBsum:3C30 PDBsum:3C38
ProteinModelPortal:Q9KLK7 DNASU:2611934 GeneID:2611934
KEGG:vch:VCA0736 PATRIC:20086018 KO:K10909 OMA:LMSQERQ
ProtClustDB:CLSK869745 EvolutionaryTrace:Q9KLK7 Uniprot:Q9KLK7
Length = 857
Score = 150 (57.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 62/243 (25%), Positives = 108/243 (44%)
Query: 876 QQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQ 935
+Q+ +R +E++A R + LA ++R PL+G++ ++++ T L EQ+ H +
Sbjct: 464 KQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQRE--HVAVL 521
Query: 936 CQRQLHKXXXXXXXXXXXXXXXXXEMV---EFTLNEVLVASISQVMMK-SNAKGIRIVNE 991
C H + EF L E LV +I ++ N KG+ +V
Sbjct: 522 CSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKE-LVCAIDRIYRPLCNEKGLELV-V 579
Query: 992 TAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
+ + + D IR+ Q+L + L+ +I F G + L QL + LA L +
Sbjct: 580 NSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGS---IRVEL---QLIEGDPLAQLVI 633
Query: 1052 RITHAGGGIPEPLLDQMFG----SEGDTSEE----GISLLISRKLVKLMNGDVQYLREAG 1103
++ G GI E L +F +E T+ E G+ L I LV++++G + E G
Sbjct: 634 QVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYG 693
Query: 1104 KST 1106
T
Sbjct: 694 IGT 696
>TIGR_CMR|VC_A0736 [details] [associations]
symbol:VC_A0736 "sensor histidine kinase LuxQ" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR015387 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 Pfam:PF09308 PRINTS:PR00344 ProDom:PD142495
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0004721
GO:GO:0016311 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 PIR:C82424
RefSeq:NP_233123.1 PDB:3C30 PDB:3C38 PDBsum:3C30 PDBsum:3C38
ProteinModelPortal:Q9KLK7 DNASU:2611934 GeneID:2611934
KEGG:vch:VCA0736 PATRIC:20086018 KO:K10909 OMA:LMSQERQ
ProtClustDB:CLSK869745 EvolutionaryTrace:Q9KLK7 Uniprot:Q9KLK7
Length = 857
Score = 150 (57.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 62/243 (25%), Positives = 108/243 (44%)
Query: 876 QQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQ 935
+Q+ +R +E++A R + LA ++R PL+G++ ++++ T L EQ+ H +
Sbjct: 464 KQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQRE--HVAVL 521
Query: 936 CQRQLHKXXXXXXXXXXXXXXXXXEMV---EFTLNEVLVASISQVMMK-SNAKGIRIVNE 991
C H + EF L E LV +I ++ N KG+ +V
Sbjct: 522 CSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKE-LVCAIDRIYRPLCNEKGLELV-V 579
Query: 992 TAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
+ + + D IR+ Q+L + L+ +I F G + L QL + LA L +
Sbjct: 580 NSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGS---IRVEL---QLIEGDPLAQLVI 633
Query: 1052 RITHAGGGIPEPLLDQMFG----SEGDTSEE----GISLLISRKLVKLMNGDVQYLREAG 1103
++ G GI E L +F +E T+ E G+ L I LV++++G + E G
Sbjct: 634 QVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYG 693
Query: 1104 KST 1106
T
Sbjct: 694 IGT 696
>TIGR_CMR|SO_3457 [details] [associations]
symbol:SO_3457 "sensor histidine kinase/response regulator"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 HOGENOM:HOG000272329 OMA:ANQVISQ
ProtClustDB:PRK11107 InterPro:IPR019247 Pfam:PF09984
RefSeq:NP_719006.2 ProteinModelPortal:Q8EBQ2 GeneID:1171133
PATRIC:23526610 Uniprot:Q8EBQ2
Length = 935
Score = 150 (57.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 63/245 (25%), Positives = 118/245 (48%)
Query: 884 LSEQTALK--RLKA--LAYTKRQIRNPLSGII-FSRKMMEGTELGAEQKRLLHTSAQCQR 938
L+++ AL+ R+K+ LA ++R PL+G+I F+R++++ T L + Q ++T +
Sbjct: 289 LAKKRALEASRIKSEFLANMSHELRTPLNGVIGFARQLVK-TPLHSSQVDYINTIERSAT 347
Query: 939 QLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIM 997
L E + F L E L +I+ + + AKG+ +V + A +
Sbjct: 348 NLLAIINDILDFSKLEAGKMVLESMPFGLRETLGETITLISGSAQAKGLELVVDIAPNV- 406
Query: 998 SETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAG 1057
+ + GDS+R+ Q++ + + +I F + G ++V L + Q + V L + G
Sbjct: 407 PDNVNGDSMRVCQIINNLVGNAIKFT-DSGSVLVKLEL-QAQTDEQV---VLRCDVIDTG 461
Query: 1058 GGIPEPLLDQMFGSEG--DTSEE------GISLLISRKLVKLMNGDVQYLREAGK-STFI 1108
GI E D +F + G D+S G+ L+I+++LV M G + + K S F
Sbjct: 462 IGIDESQQDFLFQAFGQADSSISRRFGGTGLGLVITKRLVNQMGGQIGFTSSVDKGSNFW 521
Query: 1109 VSVEL 1113
++ L
Sbjct: 522 FTLPL 526
>UNIPROTKB|Q9KLN4 [details] [associations]
symbol:VC_A0709 "Sensor protein TorS" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 InterPro:IPR014302 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF036437
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894
SMART:SM00073 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K07647 OMA:PNQGRSR
TIGRFAMs:TIGR02956 HSSP:Q9A5I4 ProtClustDB:CLSK869735 PIR:B82427
RefSeq:NP_233096.1 ProteinModelPortal:Q9KLN4 DNASU:2612043
GeneID:2612043 KEGG:vch:VCA0709 PATRIC:20085964 Uniprot:Q9KLN4
Length = 1020
Score = 153 (58.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 61/254 (24%), Positives = 109/254 (42%)
Query: 866 CFLQLASHELQQAL--HVQRLSEQTALKRLKA--LAYTKRQIRNPLSGIIFSRKMMEGTE 921
C L +H+L Q + H + + R K+ LA +IR P++G++ + ++++ T
Sbjct: 476 CQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTT 535
Query: 922 LGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMM- 979
L + Q+ + + R L F L LV+ ++M
Sbjct: 536 LTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYR-LVSETHELMQS 594
Query: 980 KSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQ 1039
++ KGI + E + ++ GD IR+ QVL + + I F G ++ + L D
Sbjct: 595 RAREKGITLTYHIDEDV-TQYWQGDEIRIGQVLNNLVGNGIKFTDQG-EVRIRIRLAPD- 651
Query: 1040 LGQSVHLAYLELRITHAGGGIPEPLLDQMFGS--EGDTSEE-----GISLLISRKLVKLM 1092
GQ + A + +G GI E +F + + D G+ L ISRKLV+ M
Sbjct: 652 -GQGIRFA-----VEDSGIGIAEEEQATLFDAFTQADAGRRKLGGTGLGLAISRKLVQAM 705
Query: 1093 NGDVQYLREAGKST 1106
G++Q + G+ +
Sbjct: 706 GGELQLASQLGQGS 719
Score = 47 (21.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 78 KLIQPFGC--LLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD-HPVLGIGSDI-KTIF 133
KL+ F LL L V+ +S A +VN+A+PS+ + V + I ++
Sbjct: 47 KLLFSFSAMALLVLLSALIGVLGFSLVAKTERDVVNNAIPSMIEARQVAELSHQIIASVQ 106
Query: 134 TAPSASALQKALGFGE--VSLLNPILVHCKTSGK 165
T +A Q+ G+ S L +L H + G+
Sbjct: 107 TLSNAKNEQEHQAAGQKVFSQLETLLTHIQQLGE 140
>TIGR_CMR|VC_A0709 [details] [associations]
symbol:VC_A0709 "sensor protein TorS" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
InterPro:IPR014302 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PIRSF:PIRSF036437 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07647 OMA:PNQGRSR TIGRFAMs:TIGR02956 HSSP:Q9A5I4
ProtClustDB:CLSK869735 PIR:B82427 RefSeq:NP_233096.1
ProteinModelPortal:Q9KLN4 DNASU:2612043 GeneID:2612043
KEGG:vch:VCA0709 PATRIC:20085964 Uniprot:Q9KLN4
Length = 1020
Score = 153 (58.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 61/254 (24%), Positives = 109/254 (42%)
Query: 866 CFLQLASHELQQAL--HVQRLSEQTALKRLKA--LAYTKRQIRNPLSGIIFSRKMMEGTE 921
C L +H+L Q + H + + R K+ LA +IR P++G++ + ++++ T
Sbjct: 476 CQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTT 535
Query: 922 LGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMM- 979
L + Q+ + + R L F L LV+ ++M
Sbjct: 536 LTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYR-LVSETHELMQS 594
Query: 980 KSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQ 1039
++ KGI + E + ++ GD IR+ QVL + + I F G ++ + L D
Sbjct: 595 RAREKGITLTYHIDEDV-TQYWQGDEIRIGQVLNNLVGNGIKFTDQG-EVRIRIRLAPD- 651
Query: 1040 LGQSVHLAYLELRITHAGGGIPEPLLDQMFGS--EGDTSEE-----GISLLISRKLVKLM 1092
GQ + A + +G GI E +F + + D G+ L ISRKLV+ M
Sbjct: 652 -GQGIRFA-----VEDSGIGIAEEEQATLFDAFTQADAGRRKLGGTGLGLAISRKLVQAM 705
Query: 1093 NGDVQYLREAGKST 1106
G++Q + G+ +
Sbjct: 706 GGELQLASQLGQGS 719
Score = 47 (21.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 78 KLIQPFGC--LLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD-HPVLGIGSDI-KTIF 133
KL+ F LL L V+ +S A +VN+A+PS+ + V + I ++
Sbjct: 47 KLLFSFSAMALLVLLSALIGVLGFSLVAKTERDVVNNAIPSMIEARQVAELSHQIIASVQ 106
Query: 134 TAPSASALQKALGFGE--VSLLNPILVHCKTSGK 165
T +A Q+ G+ S L +L H + G+
Sbjct: 107 TLSNAKNEQEHQAAGQKVFSQLETLLTHIQQLGE 140
>UNIPROTKB|P54302 [details] [associations]
symbol:luxQ "Autoinducer 2 sensor kinase/phosphatase LuxQ"
species:669 "Vibrio harveyi" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR015387 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
Pfam:PF09308 PRINTS:PR00344 ProDom:PD142495 PROSITE:PS50110
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0004721 GO:GO:0016311
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 BRENDA:2.7.13.3
EMBL:U07069 PDB:1ZHH PDB:2HJ9 PDBsum:1ZHH PDBsum:2HJ9 PIR:S49046
PDB:2HJE PDBsum:2HJE ProteinModelPortal:P54302 SMR:P54302
IntAct:P54302 ChEMBL:CHEMBL1741188 EvolutionaryTrace:P54302
Uniprot:P54302
Length = 859
Score = 146 (56.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 58/247 (23%), Positives = 111/247 (44%)
Query: 876 QQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQ 935
+Q+ +R +E++A R LA +IR P++GI+ ++++ + EQK +
Sbjct: 467 KQSNIARREAEKSAQARADFLAKMSHEIRTPINGILGVAQLLKDSVDTQEQKNQIDVLCH 526
Query: 936 C-QRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMK-SNAKGIRIVNETA 993
+ L + F+ + + ++ + KG+ +V E
Sbjct: 527 SGEHLLAVLNDILDFSKIEQGKFNIQKHPFSFTDTM-RTLENIYRPICTNKGVELVIEN- 584
Query: 994 EQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRI 1053
E + ++ D +RL Q+L + +S ++ F P G + + + L +Q + L + +
Sbjct: 585 ELDPNVEIFTDQVRLNQILFNLVSNAVKFTPIGS-IRLHAEL--EQF-YGAENSVLVVEL 640
Query: 1054 THAGGGIPEPLLDQMFG----SEGDTSEE----GISLLISRKLVKLMNGDVQYLR-EAGK 1104
T G GI LDQMF E T+ E G+ L I + LV ++ GDVQ + G
Sbjct: 641 TDTGIGIESDKLDQMFEPFVQEESTTTREYGGSGLGLTIVKNLVDMLEGDVQVRSSKGGG 700
Query: 1105 STFIVSV 1111
+TF++++
Sbjct: 701 TTFVITL 707
>UNIPROTKB|Q9KPC0 [details] [associations]
symbol:VC_2453 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07678 OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247
Pfam:PF09984 HSSP:Q9A5I4 PIR:B82075 RefSeq:NP_232082.1
ProteinModelPortal:Q9KPC0 DNASU:2612995 GeneID:2612995
KEGG:vch:VC2453 PATRIC:20083927 Uniprot:Q9KPC0
Length = 927
Score = 151 (58.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 66/257 (25%), Positives = 114/257 (44%)
Query: 868 LQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQ 926
L++ + EL A ++ +++ A + + LA ++R PL+G+I F+R+M++ T+L Q
Sbjct: 270 LEIQNVELDIA---KKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLK-TQLTNSQ 325
Query: 927 KRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNAKG 985
L T + L E + F EVL ++ ++ KG
Sbjct: 326 ADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKG 385
Query: 986 IRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVH 1045
+ I + +I + GD +R+QQVL + + SI F G + S+ L V
Sbjct: 386 LEITLKIDPKI-PRGVVGDPLRIQQVLTNLVGNSIKFTERGN---IDVSVEMRALRDDV- 440
Query: 1046 LAYLELRITHAGGGIPEPLLDQMFG--SEGDTSEE------GISLLISRKLVKLMNGDVQ 1097
L+ + G GI E Q+F S+ D S G+ L+I++KLV M G++
Sbjct: 441 -IDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEIS 499
Query: 1098 YLREAGK-STFIVSVEL 1113
+ STF ++ L
Sbjct: 500 LTSRLHQGSTFWFTLRL 516
Score = 45 (20.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS---KLCDLKIEGMKELEAVT 615
TR + +D I L +R K G LD K I++ L + +E ++ T
Sbjct: 201 TRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKKGINAMAVSLSEYHVEMQHSIDQAT 260
Query: 616 SEMVRLIETATVPILAVDV 634
S++ +E + + +D+
Sbjct: 261 SDLRETLEQLEIQNVELDI 279
>TIGR_CMR|VC_2453 [details] [associations]
symbol:VC_2453 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07678 OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247
Pfam:PF09984 HSSP:Q9A5I4 PIR:B82075 RefSeq:NP_232082.1
ProteinModelPortal:Q9KPC0 DNASU:2612995 GeneID:2612995
KEGG:vch:VC2453 PATRIC:20083927 Uniprot:Q9KPC0
Length = 927
Score = 151 (58.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 66/257 (25%), Positives = 114/257 (44%)
Query: 868 LQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQ 926
L++ + EL A ++ +++ A + + LA ++R PL+G+I F+R+M++ T+L Q
Sbjct: 270 LEIQNVELDIA---KKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLK-TQLTNSQ 325
Query: 927 KRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNAKG 985
L T + L E + F EVL ++ ++ KG
Sbjct: 326 ADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKG 385
Query: 986 IRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVH 1045
+ I + +I + GD +R+QQVL + + SI F G + S+ L V
Sbjct: 386 LEITLKIDPKI-PRGVVGDPLRIQQVLTNLVGNSIKFTERGN---IDVSVEMRALRDDV- 440
Query: 1046 LAYLELRITHAGGGIPEPLLDQMFG--SEGDTSEE------GISLLISRKLVKLMNGDVQ 1097
L+ + G GI E Q+F S+ D S G+ L+I++KLV M G++
Sbjct: 441 -IDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEIS 499
Query: 1098 YLREAGK-STFIVSVEL 1113
+ STF ++ L
Sbjct: 500 LTSRLHQGSTFWFTLRL 516
Score = 45 (20.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS---KLCDLKIEGMKELEAVT 615
TR + +D I L +R K G LD K I++ L + +E ++ T
Sbjct: 201 TRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKKGINAMAVSLSEYHVEMQHSIDQAT 260
Query: 616 SEMVRLIETATVPILAVDV 634
S++ +E + + +D+
Sbjct: 261 SDLRETLEQLEIQNVELDI 279
>UNIPROTKB|Q9KR16 [details] [associations]
symbol:VC_1831 "Sensor histidine kinase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR004010 Pfam:PF02743
HSSP:Q56312 PIR:C82151 RefSeq:NP_231465.1 ProteinModelPortal:Q9KR16
DNASU:2613585 GeneID:2613585 KEGG:vch:VC1831 PATRIC:20082704
OMA:STNAKTA ProtClustDB:CLSK874555 Uniprot:Q9KR16
Length = 736
Score = 142 (55.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 58/248 (23%), Positives = 112/248 (45%)
Query: 879 LHVQRLSEQTALKRLKA-LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQC- 936
L +++ Q + K A LA +IR P++G++ + +++ EL ++Q++ L + +
Sbjct: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
Query: 937 QRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNA-KGIRIVNETAEQ 995
+ + + F L + + SI + KG++ +E
Sbjct: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSI-IGSIKSIYSSLCVEKGLKF-QLNSEI 460
Query: 996 IMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITH 1055
YGD RL+Q++ + LS ++ F G V+ L+++ + YL +++
Sbjct: 461 TDGRWYYGDKARLRQIIFNLLSNAVKFTEAG---FVAIGLSEESCDEE---NYLIIKVQD 514
Query: 1056 AGGGIPEPLLDQMFG----SEGDTSEE----GISLLISRKLVKLMNGDVQYLREAGK-ST 1106
G GI + L ++F +E T+ G+ L I +++ +LMNG V E G+ S
Sbjct: 515 TGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSC 574
Query: 1107 FIVSVELA 1114
F V V+LA
Sbjct: 575 FKVRVKLA 582
>TIGR_CMR|VC_1831 [details] [associations]
symbol:VC_1831 "sensor histidine kinase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR004010 Pfam:PF02743
HSSP:Q56312 PIR:C82151 RefSeq:NP_231465.1 ProteinModelPortal:Q9KR16
DNASU:2613585 GeneID:2613585 KEGG:vch:VC1831 PATRIC:20082704
OMA:STNAKTA ProtClustDB:CLSK874555 Uniprot:Q9KR16
Length = 736
Score = 142 (55.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 58/248 (23%), Positives = 112/248 (45%)
Query: 879 LHVQRLSEQTALKRLKA-LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQC- 936
L +++ Q + K A LA +IR P++G++ + +++ EL ++Q++ L + +
Sbjct: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
Query: 937 QRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNA-KGIRIVNETAEQ 995
+ + + F L + + SI + KG++ +E
Sbjct: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSI-IGSIKSIYSSLCVEKGLKF-QLNSEI 460
Query: 996 IMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITH 1055
YGD RL+Q++ + LS ++ F G V+ L+++ + YL +++
Sbjct: 461 TDGRWYYGDKARLRQIIFNLLSNAVKFTEAG---FVAIGLSEESCDEE---NYLIIKVQD 514
Query: 1056 AGGGIPEPLLDQMFG----SEGDTSEE----GISLLISRKLVKLMNGDVQYLREAGK-ST 1106
G GI + L ++F +E T+ G+ L I +++ +LMNG V E G+ S
Sbjct: 515 TGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSC 574
Query: 1107 FIVSVELA 1114
F V V+LA
Sbjct: 575 FKVRVKLA 582
>UNIPROTKB|Q55434 [details] [associations]
symbol:cph2 "Phytochrome-like protein cph2" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0009585 "red,
far-red light phototransduction" evidence=TAS] [GO:0009883 "red or
far-red light photoreceptor activity" evidence=TAS] [GO:0018298
"protein-chromophore linkage" evidence=TAS] InterPro:IPR003018
InterPro:IPR001054 InterPro:IPR001294 InterPro:IPR013515
InterPro:IPR016132 Pfam:PF00360 Pfam:PF01590 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 SMART:SM00065 Pfam:PF00990
Pfam:PF00563 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0018298 GO:GO:0016849 GO:GO:0009190
InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887
Gene3D:3.20.20.450 InterPro:IPR001633 SMART:SM00052
SUPFAM:SSF141868 PROSITE:PS50883 EMBL:BA000022
GenomeReviews:BA000022_GR GO:GO:0008020 GO:GO:0009883 PIR:S75801
RefSeq:NP_442466.1 RefSeq:YP_005652527.1 ProteinModelPortal:Q55434
DIP:DIP-48801N IntAct:Q55434 STRING:Q55434 GeneID:12253839
GeneID:952361 KEGG:syn:sll0821 KEGG:syy:SYNGTS_2574 PATRIC:23842638
eggNOG:COG2203 KO:K02488 OMA:AIHQGEL ProtClustDB:CLSK2393495
Uniprot:Q55434
Length = 1276
Score = 156 (60.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 48/160 (30%), Positives = 77/160 (48%)
Query: 218 SMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSE-ITKSGLEPYLGLHYPATDIPQ 276
++ +++E G DRV YKF D GEV++E + ++ L LGLH+P DIP
Sbjct: 23 TLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLHFPVEDIPP 82
Query: 277 AARFLFMKNKVRMI-VDCRARHVKV--LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNS 333
AR + N+ +MI VD R K L P + + SCH+QY+ M
Sbjct: 83 QAREE-LGNQRKMIAVDVAHRRKKSHELSGRISPTEHS--NGHYTTVDSCHIQYLLAMGV 139
Query: 334 IASLVMAVVVNDXXXXGDNTLPQKRKRLWGLVVCHNTTPR 373
++SL + V+ + ++LWG++ H++ PR
Sbjct: 140 LSSLTVPVMQD--------------QQLWGIMAVHHSKPR 165
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 532 KHEPDEKD-DGRKMHPRSSFKAFLEVVKTRSLP-WKDYE--MDAIHSLQLIL 579
KH ++ D R + PR SF+A+ E K +P W E + + S QL +
Sbjct: 367 KHWAGKRGIDRRNILPRLSFEAWEETQKL--VPTWNRSERKLAQVASTQLYM 416
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1031 VSSSLTKDQLGQSVH 1045
VS ++T+ QL + VH
Sbjct: 182 VSLAITQSQLSRQVH 196
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 912 FSRKMMEGTELGAEQKRLLHTSAQCQRQLHK 942
F+ + E L +++ L T +Q RQ+H+
Sbjct: 167 FTEQEWETMALLSKEVSLAITQSQLSRQVHQ 197
>ASPGD|ASPL0000074067 [details] [associations]
symbol:nikA species:162425 "Emericella nidulans"
[GO:0007234 "osmosensory signaling via phosphorelay pathway"
evidence=ISS] [GO:0071474 "cellular hyperosmotic response"
evidence=IMP] [GO:0071470 "cellular response to osmotic stress"
evidence=IMP] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEA]
[GO:0071473 "cellular response to cation stress" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 EMBL:BN001303
ProteinModelPortal:C8V8F5 EnsemblFungi:CADANIAT00005966 OMA:IGMTQLT
Uniprot:C8V8F5
Length = 1297
Score = 153 (58.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 60/280 (21%), Positives = 122/280 (43%)
Query: 839 ARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAY 898
A +G + + L+ VN + + + + +Q+ + +E + + LA
Sbjct: 672 ATDGDFTK-LITVNASGEMDELKRKINKMVSNLRDSIQRNTAAREAAELANRTKSEFLAN 730
Query: 899 TKRQIRNPLSGII-FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXX 957
+IR P++GII ++ ++ +L + +L+ L
Sbjct: 731 MSHEIRTPMNGIIGMTQLTLDTDDLKPYTREMLNVVHNLANSLLTIIDDILDISKIEANR 790
Query: 958 XX-EMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
E + FT+ + ++ + +K+N K + + + + + + + GD RL+Q++ + +
Sbjct: 791 MVIESIPFTVRGTVFNALKTLAVKANEKFLSLTYQV-DNTVPDYVIGDPFRLRQIILNLV 849
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGS----E 1072
+I F +G + ++Q + + A+ E ++ G GI E LD +F + +
Sbjct: 850 GNAIKFTEHGEVKLTICKSDREQCAANEY-AF-EFSVSDTGIGIEEDKLDLIFDTFQQAD 907
Query: 1073 GDTSEE----GISLLISRKLVKLMNGDVQYLREAGK-STF 1107
G T+ G+ L IS++LV LM GDV E G STF
Sbjct: 908 GSTTRRFGGTGLGLSISKRLVNLMGGDVWVTSEYGHGSTF 947
Score = 43 (20.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/178 (18%), Positives = 72/178 (40%)
Query: 584 KDVGTLDLDTKSIHSKLCDLKIEGMKEL-EAVTSEMVRLIETATVPILAVDVDGLVNGWN 642
K V DL T+ + + C +I +K + ++ ++ + + T V DG++ G
Sbjct: 394 KAVAKGDL-TQKVQAN-CKGEIAELKNIINSMVDQLRQFAQEVTKIAKEVGTDGVLGGQA 451
Query: 643 TKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIND 702
T + ++ G D + + + + + + +G + + ++ +I D
Sbjct: 452 T-VNDVEGTWKDLTENVNRMANNLTTQVREIADVTTAVAKGDLSKKVTANVQ---GEILD 507
Query: 703 DPITLIVNACASRDLHDNVVGVCFVAQDITPQKTV--MDKFTRIEGDYKAIVQNPNPL 758
T +N R L+ V VA+++ T+ K +EG +K + N N +
Sbjct: 508 LKST--INGMVDR-LNTFAFEVSKVAREVGTDGTLGGQAKVDNVEGKWKDLTDNVNTM 562
>TIGR_CMR|GSU_0718 [details] [associations]
symbol:GSU_0718 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
HOGENOM:HOG000217841 HSSP:P06143 RefSeq:NP_951775.1
ProteinModelPortal:Q74F91 GeneID:2687214 KEGG:gsu:GSU0718
PATRIC:22024197 OMA:EPIHILL ProtClustDB:CLSK763092
BioCyc:GSUL243231:GH27-675-MONOMER Uniprot:Q74F91
Length = 589
Score = 139 (54.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 51/242 (21%), Positives = 111/242 (45%)
Query: 885 SEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQ-CQRQLHKX 943
+E + + + LA +IR P++G++ +++ TELG EQ+ L + + L
Sbjct: 185 AEDASRAKSEFLANMSHEIRTPINGVLGMLQLVLDTELGDEQRHCLEMAKRSADALLRLV 244
Query: 944 XXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYG 1003
E F L + +++ + ++ KG+ ++ + + + G
Sbjct: 245 NDILDFSRIEARKMVFESRPFDLTACVNSAVEILAFEARRKGLAVMVRMGPDVPAAVV-G 303
Query: 1004 DSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGI-PE 1062
D RL+QVL + + ++ F G ++ V+++ + Q + A + + + G GI P+
Sbjct: 304 DEARLRQVLVNLIGNAVKFTDRG-KVEVTAARAERQ-SDPLRTA-IRISVRDTGIGIAPQ 360
Query: 1063 PL--LDQMFGS-EGDTSEE----GISLLISRKLVKLMNGDVQYLREAGK-STFIVSVELA 1114
L ++F +G + G+ L ++R +V+ M G + ++G+ STF +++ L
Sbjct: 361 ERERLFRVFSQVDGACNRRFGGTGLGLALTRDIVEAMGGAIDVESQSGQGSTFTITIPLL 420
Query: 1115 AA 1116
A
Sbjct: 421 LA 422
Score = 48 (22.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/89 (23%), Positives = 33/89 (37%)
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+LE L A V +D G++ N +A + G + +G F V
Sbjct: 45 QLELSLERYANLYHFAPVGYATIDAVGVIADANRTLAGMIGADCREMVGLLFSDFVHKD- 103
Query: 670 IDTVKRMLYLA-LQGQEEQNIQFEIKTHG 697
D + +LA GQ E + E + G
Sbjct: 104 -DVTSFVSHLARCTGQRE-GVTGEFRLSG 130
>ASPGD|ASPL0000033199 [details] [associations]
symbol:tcsA species:162425 "Emericella nidulans"
[GO:0004673 "protein histidine kinase activity" evidence=ISA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISA] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISA] [GO:0075306 "regulation of conidium formation"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IEA]
[GO:0009405 "pathogenesis" evidence=IEA] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0048315 "conidium
formation" evidence=IMP] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0005737 GO:GO:0016020 GO:GO:0006355 GO:GO:0048315
EMBL:BN001305 GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0030437
EMBL:AACD01000093 EMBL:AJ271843 RefSeq:XP_662900.1
ProteinModelPortal:Q9P896 EnsemblFungi:CADANIAT00003803
GeneID:2871585 KEGG:ani:AN5296.2 HOGENOM:HOG000216303 OMA:KGHAPRV
OrthoDB:EOG4BVW2T InterPro:IPR013656 Pfam:PF08448 Uniprot:Q9P896
Length = 682
Score = 139 (54.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 80/366 (21%), Positives = 149/366 (40%)
Query: 748 YKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCR 807
YK +V IF D G WN L G+K EE+I K F +
Sbjct: 170 YKILVDTVKDYA--IFMLDPTGHIATWNAGAGVLKGYKAEEIIGKH-----FSILYSPAD 222
Query: 808 LKNQEAFVNLGIVLNKAMSGQDPEKVPFGF-FARNGK--YAECLLCVNKKLDREGAVTGV 864
N + L + L + G+ ++ G+ + R+G +A L+ + + V V
Sbjct: 223 RDNGKPARALDVCLRE---GRIEDE---GWRYRRDGSRFWANVLITPIYQFGQH--VGFV 274
Query: 865 FCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGA 924
L + +A + E + LK LA +IR P++G+ + M+ T L
Sbjct: 275 KVTRDLTERKEAEACMIAAFEESSRLKT-DFLANISHEIRTPMNGMQIALTMLTDTGLSE 333
Query: 925 EQKR---LLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKS 981
EQ+ ++ S Q+ +M++ + E+ V ++ + S
Sbjct: 334 EQREHANIVQDSMSLLLQIVNDVLDYSKLSSGSFSLHADMLD--IREI-VGAVVRNCRSS 390
Query: 982 NAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG-QLMVSSSLTKDQL 1040
+G+ + E + ++ + + GD +R +QVL + + ++ F G + ++SS ++
Sbjct: 391 LQEGVELDTEISPKLPTR-MRGDPLRYRQVLQNLVGNAVKFTEKGSIHVKITSSTDEEDS 449
Query: 1041 GQSVHLAYLELRITHAGGGIPEPLLDQMFG--SEGDTSEE------GISLLISRKLVKLM 1092
SV + +T G G+P+ ++ +F S S G+ L I + L +LM
Sbjct: 450 DSSV----VRTEVTDTGIGVPDSAINTLFTPFSRFANSAARKYQGTGLGLSICKSLAELM 505
Query: 1093 NGDVQY 1098
+G V Y
Sbjct: 506 DGSVGY 511
>UNIPROTKB|Q9P896 [details] [associations]
symbol:tcsA "Two-component system protein A" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000156 "phosphorelay response
regulator activity" evidence=NAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0030437 "ascospore formation" evidence=IMP]
[GO:0035556 "intracellular signal transduction" evidence=NAS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0048315 EMBL:BN001305
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0030437
EMBL:AACD01000093 EMBL:AJ271843 RefSeq:XP_662900.1
ProteinModelPortal:Q9P896 EnsemblFungi:CADANIAT00003803
GeneID:2871585 KEGG:ani:AN5296.2 HOGENOM:HOG000216303 OMA:KGHAPRV
OrthoDB:EOG4BVW2T InterPro:IPR013656 Pfam:PF08448 Uniprot:Q9P896
Length = 682
Score = 139 (54.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 80/366 (21%), Positives = 149/366 (40%)
Query: 748 YKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCR 807
YK +V IF D G WN L G+K EE+I K F +
Sbjct: 170 YKILVDTVKDYA--IFMLDPTGHIATWNAGAGVLKGYKAEEIIGKH-----FSILYSPAD 222
Query: 808 LKNQEAFVNLGIVLNKAMSGQDPEKVPFGF-FARNGK--YAECLLCVNKKLDREGAVTGV 864
N + L + L + G+ ++ G+ + R+G +A L+ + + V V
Sbjct: 223 RDNGKPARALDVCLRE---GRIEDE---GWRYRRDGSRFWANVLITPIYQFGQH--VGFV 274
Query: 865 FCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGA 924
L + +A + E + LK LA +IR P++G+ + M+ T L
Sbjct: 275 KVTRDLTERKEAEACMIAAFEESSRLKT-DFLANISHEIRTPMNGMQIALTMLTDTGLSE 333
Query: 925 EQKR---LLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKS 981
EQ+ ++ S Q+ +M++ + E+ V ++ + S
Sbjct: 334 EQREHANIVQDSMSLLLQIVNDVLDYSKLSSGSFSLHADMLD--IREI-VGAVVRNCRSS 390
Query: 982 NAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG-QLMVSSSLTKDQL 1040
+G+ + E + ++ + + GD +R +QVL + + ++ F G + ++SS ++
Sbjct: 391 LQEGVELDTEISPKLPTR-MRGDPLRYRQVLQNLVGNAVKFTEKGSIHVKITSSTDEEDS 449
Query: 1041 GQSVHLAYLELRITHAGGGIPEPLLDQMFG--SEGDTSEE------GISLLISRKLVKLM 1092
SV + +T G G+P+ ++ +F S S G+ L I + L +LM
Sbjct: 450 DSSV----VRTEVTDTGIGVPDSAINTLFTPFSRFANSAARKYQGTGLGLSICKSLAELM 505
Query: 1093 NGDVQY 1098
+G V Y
Sbjct: 506 DGSVGY 511
>TAIR|locus:2177261 [details] [associations]
symbol:HK2 "histidine kinase 2" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0004673 "protein histidine
kinase activity" evidence=IEA;ISS;IDA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0009884 "cytokinin receptor activity" evidence=TAS] [GO:0010029
"regulation of seed germination" evidence=RCA;IMP] [GO:0010271
"regulation of chlorophyll catabolic process" evidence=IMP]
[GO:0048831 "regulation of shoot system development"
evidence=RCA;IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0043424 "protein histidine
kinase binding" evidence=IPI] [GO:0009636 "response to toxic
substance" evidence=IMP] [GO:0005034 "osmosensor activity"
evidence=IGI] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
[GO:0034757 "negative regulation of iron ion transport"
evidence=IMP] [GO:0019900 "kinase binding" evidence=IPI]
[GO:0010087 "phloem or xylem histogenesis" evidence=IMP]
[GO:0080117 "secondary growth" evidence=IMP] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0048509
"regulation of meristem development" evidence=IMP] [GO:0070417
"cellular response to cold" evidence=IMP] [GO:0071215 "cellular
response to abscisic acid stimulus" evidence=IMP] [GO:0031537
"regulation of anthocyanin metabolic process" evidence=RCA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0007275 GO:GO:0005886 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0034757 GO:GO:0035556
GO:GO:0009636 GO:GO:0009651 GO:GO:0009414 GO:GO:0005622
GO:GO:0023014 GO:GO:0010087 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P39928 GO:GO:0005034 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 EMBL:AB046869 EMBL:AB011485
EMBL:BT002530 EMBL:BT008407 EMBL:AK175733 IPI:IPI00520698
RefSeq:NP_568532.1 UniGene:At.23233 ProteinModelPortal:Q9C5U2
SMR:Q9C5U2 IntAct:Q9C5U2 STRING:Q9C5U2 PaxDb:Q9C5U2 PRIDE:Q9C5U2
EnsemblPlants:AT5G35750.1 GeneID:833552 KEGG:ath:AT5G35750
TAIR:At5g35750 eggNOG:COG0642 HOGENOM:HOG000116474
InParanoid:Q9C5U2 KO:K14489 OMA:SVDMMSG PhylomeDB:Q9C5U2
ProtClustDB:CLSN2687668 Genevestigator:Q9C5U2 GO:GO:0009884
GO:GO:0004673 GO:GO:0071215 GO:GO:0070417 GO:GO:0010271
GO:GO:0009909 GO:GO:0048509 GO:GO:0010029 GO:GO:0048831
GO:GO:0080117 InterPro:IPR006189 Pfam:PF03924 SMART:SM01079
PROSITE:PS50839 Uniprot:Q9C5U2
Length = 1176
Score = 125 (49.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 41/183 (22%), Positives = 82/183 (44%)
Query: 874 ELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTS 933
+ Q+ ++ +E + + + LA +IR P++G++ KM+ T+L A+Q T+
Sbjct: 570 DCQKMRELKARAEAADIAKSQFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQMDYAQTA 629
Query: 934 AQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNAKGIRIVNET 992
+ L E V F + +L S + K+N KGI +
Sbjct: 630 HGSGKDLTSLINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYV 689
Query: 993 AEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHL--AYLE 1050
+ Q+ + + GD R +Q++ + + SI F G + +S L D++ + + + A L+
Sbjct: 690 SSQV-PDVVVGDPSRFRQIITNLVGNSIKFTQERGHIFISVHLA-DEVKEPLTIEDAVLK 747
Query: 1051 LRI 1053
R+
Sbjct: 748 QRL 750
Score = 68 (29.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1049 LELRITHAGGGIPEPLLDQMFGS--EGDTSEE------GISLLISRKLVKLMNGDVQYLR 1100
L + + G GIP ++F + D+S GI L IS++LV+LM G++ ++
Sbjct: 792 LLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGIGLSISKRLVELMQGEMGFVS 851
Query: 1101 EAG-KSTF 1107
E G STF
Sbjct: 852 EPGIGSTF 859
>TIGR_CMR|CPS_2475 [details] [associations]
symbol:CPS_2475 "sensor histidine kinase/response
regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
RefSeq:YP_269191.1 ProteinModelPortal:Q481S8 STRING:Q481S8
GeneID:3522271 KEGG:cps:CPS_2475 PATRIC:21468019
HOGENOM:HOG000289548 OMA:EYRREMR ProtClustDB:CLSK869032
BioCyc:CPSY167879:GI48-2538-MONOMER Uniprot:Q481S8
Length = 784
Score = 137 (53.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 65/255 (25%), Positives = 117/255 (45%)
Query: 875 LQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQK---RLLH 931
LQQA + ++E+ + + LA +IR P++G++ ++++ EL Q ++LH
Sbjct: 278 LQQA---KEIAEEANKAKSQFLATMSHEIRTPMNGMLGMIQLLQNNELTDPQSHRVKILH 334
Query: 932 TSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNE 991
S + + F+L+E+L IS + K++ K +++ +
Sbjct: 335 DSTEALLETFDHVLQFAQLEEGGYVCSESF--FSLDELLHNLISLMQPKADEKHLQLKLD 392
Query: 992 TAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
T + + + + L+Q+L + L+ +I F G ++++ S L QS H L
Sbjct: 393 TP--VTGDCYHDAAGSLRQILTNLLANAIKFTDQG-EILLRVS----HLEQSEHQHRLRF 445
Query: 1052 RITHAGGGIPEPLLDQ-MFG--SEGDTS------EEGISLLISRKLVKLMNGDVQYLREA 1102
I +G GI EP L Q +F ++ D S G+ L I R+L + M G +
Sbjct: 446 SIQDSGIGI-EPALQQHIFERFTQADESITRRFGGTGLGLSICRQLSQEMGGQIGVESTV 504
Query: 1103 GK-STFIVSVELAAA 1116
G+ STF V V+L A
Sbjct: 505 GQGSTFWVEVKLKVA 519
>UNIPROTKB|P14376 [details] [associations]
symbol:rcsC "RcsC sensory histidine kinase" species:83333
"Escherichia coli K-12" [GO:0018106 "peptidyl-histidine
phosphorylation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046777
"protein autophosphorylation" evidence=IMP] [GO:0044010
"single-species biofilm formation" evidence=IMP] [GO:0071470
"cellular response to osmotic stress" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;RCA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;IDA] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA;IDA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR019017 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 Pfam:PF09456 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50112 PROSITE:PS51426 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:U00096_GR GO:GO:0046777 GO:GO:0005622
GO:GO:0071470 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
BRENDA:2.7.13.3 GO:GO:0018106 GO:GO:0044010 EMBL:M28242 EMBL:L11272
PIR:H64991 RefSeq:NP_416722.2 PDB:2AYX PDB:2AYY PDB:2AYZ
PDBsum:2AYX PDBsum:2AYY PDBsum:2AYZ ProteinModelPortal:P14376
SMR:P14376 DIP:DIP-10647N IntAct:P14376 MINT:MINT-1267658
PRIDE:P14376 EnsemblBacteria:EBESCT00000001645
EnsemblBacteria:EBESCT00000017555 GeneID:948993 KEGG:eco:b2218
PATRIC:32119795 EchoBASE:EB0815 EcoGene:EG10822
HOGENOM:HOG000122300 KO:K07677 OMA:HPINRSL ProtClustDB:PRK10841
BioCyc:EcoCyc:RCSC-MONOMER BioCyc:ECOL316407:JW5917-MONOMER
BioCyc:ECOL316407:JW5920-MONOMER EvolutionaryTrace:P14376
Genevestigator:P14376 Uniprot:P14376
Length = 949
Score = 137 (53.3 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 66/257 (25%), Positives = 109/257 (42%)
Query: 874 ELQQALH-VQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHT 932
+++++L + + +EQ + + LA ++R PL GII + +++ EL RL+
Sbjct: 451 KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTA 510
Query: 933 SAQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVL---VASISQVMMKSNAKGIRI 988
L K E EF+ EV+ A+ ++++ G+
Sbjct: 511 MNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQL-GLYC 569
Query: 989 VNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAY 1048
E + L GD +RLQQV+++ LS +I F G + + D G Y
Sbjct: 570 FIEPDVPV---ALNGDPMRLQQVISNLLSNAIKFTDTG---CIVLHVRAD--GD-----Y 616
Query: 1049 LELRITHAGGGIPEP----LLDQMF----GSEGDTSEEGISLLISRKLVKLMNGDVQYLR 1100
L +R+ G GIP L D F G + + G+ L I KL+ +M+GD+
Sbjct: 617 LSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDS 676
Query: 1101 EAGK-STFIVSVELAAA 1116
E G S F V + L A
Sbjct: 677 EPGMGSQFTVRIPLYGA 693
>TIGR_CMR|GSU_1265 [details] [associations]
symbol:GSU_1265 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
HOGENOM:HOG000217841 RefSeq:NP_952318.1 ProteinModelPortal:Q74DQ0
GeneID:2685795 KEGG:gsu:GSU1265 PATRIC:22025301 OMA:SHITHEF
ProtClustDB:CLSK743116 BioCyc:GSUL243231:GH27-1218-MONOMER
Uniprot:Q74DQ0
Length = 445
Score = 132 (51.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 62/255 (24%), Positives = 107/255 (41%)
Query: 868 LQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQK 927
L+ EL+ A +E + + LA+ +IR+ L I + + T L Q+
Sbjct: 49 LRAVEQELRTAATA---AEAATTAKSELLAHVSHEIRSQLQLISGAVDLFRQTRLDEIQR 105
Query: 928 RLLHTSAQCQRQLH-KXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGI 986
L L E + F L ++ A+ +Q++ ++ KG+
Sbjct: 106 HYLEGFQHANELLLCLVNDILDTSRLEAGHLRLESLPFDLAGLVAATGTQLLWQAQRKGL 165
Query: 987 RIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHL 1046
+ + + + S L GD R+QQV+ + +I F G + + D L S L
Sbjct: 166 ELSWQVSPDVPSRLL-GDQARVQQVIVNLAGNAIKFTREGA-VTIRVERVPDPLTAS-SL 222
Query: 1047 AYLELRITHAGGGIPEPLLDQMF-----GSEGDTSE----EGISLLISRKLVKLMNGDVQ 1097
A + I G GIP L +F GS +TS+ G+ L I++ L++ M+GD+
Sbjct: 223 AMIRFVIEDTGIGIPVDRLGGIFERYDRGSP-ETSKLFGGTGLGLAIAKGLIEAMDGDIT 281
Query: 1098 YLREAGK-STFIVSV 1111
G+ S FIV++
Sbjct: 282 VESYEGRGSRFIVTI 296
>TIGR_CMR|GSU_1928 [details] [associations]
symbol:GSU_1928 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 HOGENOM:HOG000217841 RefSeq:NP_952977.2
ProteinModelPortal:Q74BV4 GeneID:2685383 KEGG:gsu:GSU1928
PATRIC:22026721 ProtClustDB:CLSK741729
BioCyc:GSUL243231:GH27-2002-MONOMER Uniprot:Q74BV4
Length = 810
Score = 134 (52.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 62/264 (23%), Positives = 116/264 (43%)
Query: 868 LQLASHELQQAL----HVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELG 923
L + EL++A+ + ++ + + + LA +IR P++G++ ++ T+L
Sbjct: 275 LSRTNEELERAVADLSKAKEAADSASQSKSRFLANVSHEIRTPMNGVLGMVSLLLETDLQ 334
Query: 924 AEQKR---LLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMK 980
A+Q+ ++ +S + Q+ E + F V+ + +
Sbjct: 335 AKQREYAEIIRSSGELLMQV--INDLLDFSRIESGKLKMEQLPFAARRVIEEMATIYGER 392
Query: 981 SNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG-QLMVSSSLTKDQ 1039
+ KG+ + A ++ + L GD RL+QVL + L ++ F G L V S+
Sbjct: 393 ARQKGVFLEYSMAGEV-PDRLLGDRHRLRQVLGNLLDNAVKFTLKGTITLTVRGSVE--- 448
Query: 1040 LGQSVHLAYLELRITHAGGGIPEPLLDQMFG--SEGDTSEE------GISLLISRKLVKL 1091
G L+ + ++ G GIP+ +L ++F ++ D S G+ L I R LV+L
Sbjct: 449 -GGVCRLSCI---VSDTGIGIPQDMLPRLFHPFTQADDSNTRRFGGTGLGLAIVRHLVEL 504
Query: 1092 MNGDVQYLREAG-KSTFIVSVELA 1114
M G V E G S F +V L+
Sbjct: 505 MGGTVSCDSEPGCGSVFRFTVALS 528
>TIGR_CMR|SO_4002 [details] [associations]
symbol:SO_4002 "sensory transduction histidine kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001638 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497
Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50894 SMART:SM00062 SMART:SM00073
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005215 GO:GO:0030288
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 InterPro:IPR025997 Pfam:PF13407
HSSP:Q9A5I4 RefSeq:NP_719532.2 ProteinModelPortal:Q8EAA6
GeneID:1171630 KEGG:son:SO_4002 PATRIC:23527674
HOGENOM:HOG000286637 ProtClustDB:CLSK577303 Uniprot:Q8EAA6
Length = 1702
Score = 154 (59.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 66/261 (25%), Positives = 110/261 (42%)
Query: 866 CF-LQLASHELQQALHVQRLSEQTALKRLKA--LAYTKRQIRNPLSGIIFSRKMMEGTEL 922
C+ L + + QA + A R K+ LA +IR P++ II + T+L
Sbjct: 940 CWALDITQEKAIQAELASAKLQADAANRAKSDFLANMSHEIRTPMNAIIGMSYLALQTDL 999
Query: 923 GAEQKRLLHTSAQCQRQL-HKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKS 981
++K + Q L + E +EF L+EVL + + K
Sbjct: 1000 AEKRKDYIAKVHQAAGSLLNIINDILDFSKIEANKLTVEHIEFDLDEVLTQLNNVIGFKV 1059
Query: 982 NAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLG 1041
+R++ + A GD RL Q+L ++ + ++ F P G +++S D+ G
Sbjct: 1060 EENSMRLIYDIATDC-PRYFIGDPQRLGQILLNYCNNAVKFSPKGSDILLSCQAELDKQG 1118
Query: 1042 QSVHLAYLELRITHAGGGIPEPLLDQMFGS--EGDTSEE------GISLLISRKLVKLMN 1093
A L + G GIP ++F S +GDTS G+ L I ++L +LM
Sbjct: 1119 -----ATLTFCVADDGIGIPLDKQARLFHSFEQGDTSTSRKYGGTGLGLAICKRLSELMQ 1173
Query: 1094 GDVQYLREAGK-STFIVSVEL 1113
G+V E G+ S F + + L
Sbjct: 1174 GEVWCESELGQGSRFYLRLHL 1194
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 632 VDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQF 691
V V+G N ++ +TGL V+ A+ FL +D Y+ E++ I F
Sbjct: 858 VCVNGTCRYVNAQMTLMTGLEVEHAVADIFLQ-PKDY-------WHYIRELAPEQECITF 909
Query: 692 EIKTHGSKINDDPITLIVNACASRDLHDNV-VGVCFVAQDITPQKTV 737
E K G + + ++ A + +D +C+ A DIT +K +
Sbjct: 910 ESKLKG--YHGQILDVLFTAYPT--FYDGQHANLCW-ALDITQEKAI 951
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP-LGIVTQSPNIM 436
PLR ++Q H N +L + ++ ++L ++ + + P L + Q P+I
Sbjct: 389 PLRLNFRQISQ----HFNPDLSIN-ELRLADLLTSEARVNFLKTLTEPELNFLRQHPSIR 443
Query: 437 DLVKCDGAALLY 448
++ DGA + Y
Sbjct: 444 VGIEPDGAPIDY 455
Score = 37 (18.1 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 35/188 (18%), Positives = 68/188 (36%)
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA--IGKHFLTLVED 667
+LE+ ++ L ++ + +D G++ N + L G+ DK +G +L +
Sbjct: 709 QLESSMNKFHALFDSVMDACVIIDKRGVIKECNAALQTLLGVE-DKTALVGT---SLTQF 764
Query: 668 SSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFV 727
DT Q E+ Q +K I D I + + N
Sbjct: 765 HLADTFMGSAVQIAQSVEDVLKQGLLKFEAD-ITDSQGQSIPAEVTLKSIELNTERFVLA 823
Query: 728 AQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKRE 787
++ ++D+ R E + V +P+ + + G C N M +TG + E
Sbjct: 824 TYHNLAERRLVDRLIRHERNLLKNVLGMSPIGVWVCVN---GTCRYVNAQMTLMTGLEVE 880
Query: 788 EVIDKLLL 795
+ + L
Sbjct: 881 HAVADIFL 888
>UNIPROTKB|P14377 [details] [associations]
symbol:zraS species:83333 "Escherichia coli K-12"
[GO:0016020 "membrane" evidence=IDA] [GO:0023014 "signal
transduction by phosphorylation" evidence=IEA;IMP] [GO:0071294
"cellular response to zinc ion" evidence=IEP] [GO:0071284 "cellular
response to lead ion" evidence=IEP] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA;IDA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA;IMP]
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005887 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046777 EMBL:U00006 GO:GO:0071294
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
BRENDA:2.7.13.3 GO:GO:0071284 EMBL:M28369 PIR:F65207
RefSeq:NP_418431.1 RefSeq:YP_491457.1 ProteinModelPortal:P14377
SMR:P14377 DIP:DIP-9981N IntAct:P14377 PRIDE:P14377
EnsemblBacteria:EBESCT00000003871 EnsemblBacteria:EBESCT00000016271
GeneID:12934459 GeneID:948506 KEGG:ecj:Y75_p3193 KEGG:eco:b4003
PATRIC:32123531 EchoBASE:EB0008 EcoGene:EG10008
HOGENOM:HOG000126797 KO:K07709 OMA:GRQGTIT ProtClustDB:PRK10364
BioCyc:EcoCyc:HYDH-MONOMER BioCyc:ECOL316407:JW3967-MONOMER
Genevestigator:P14377 Uniprot:P14377
Length = 465
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 870 LASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQKR 928
L S +L Q ++R + AL L A +IRNPLS I ++ E G E +
Sbjct: 226 LRSRQLLQD-EMKRKEKLVALGHLAA--GVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQ 282
Query: 929 LLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRI 988
L A+ +L++ + V+ LN ++ S+ V +N++ I++
Sbjct: 283 LAQVMAKEADRLNRVVSELLELVKPTHLAL-QAVD--LNTLINHSLQLVSQDANSREIQL 339
Query: 989 VNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAY 1048
TA + E + D RL QVL L++ +N + GQ V S +T + G V ++
Sbjct: 340 -RFTANDTLPE-IQADPDRLTQVL---LNLYLNAIQAIGQHGVIS-VTASESGAGVKIS- 392
Query: 1049 LELRITHAGGGIPEPLLDQMFGSEGDTSEEG--ISLLISRKLVKLMNGDVQYLREAGK-S 1105
+T +G GI LD +F T EG + L + +V+ G +Q + GK S
Sbjct: 393 ----VTDSGKGIAADQLDAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGS 448
Query: 1106 TF 1107
TF
Sbjct: 449 TF 450
>TIGR_CMR|GSU_1302 [details] [associations]
symbol:GSU_1302 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 InterPro:IPR021796 Pfam:PF11845 RefSeq:NP_952355.1
ProteinModelPortal:Q74DL4 GeneID:2686509 KEGG:gsu:GSU1302
PATRIC:22025379 HOGENOM:HOG000131064 OMA:DQADAFE
ProtClustDB:CLSK743117 BioCyc:GSUL243231:GH27-1286-MONOMER
Uniprot:Q74DL4
Length = 835
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 58/242 (23%), Positives = 101/242 (41%)
Query: 885 SEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXX 944
+E+ + + LA +IR P++ II +++ T L EQ+RLL S L
Sbjct: 321 AEEASRAKSDFLATMSHEIRTPMNAIIGINQLLVDTPLTQEQRRLLDDSTTAAESLLIII 380
Query: 945 XXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVM-MKSNAKGIRIVNETAEQIMSETLYG 1003
E V S+ ++ +++ K I + E ++
Sbjct: 381 NDILDLSRVEARRLELFPEAVELRSFVESLRRLFAVQATRKQISLSVSVGEGT-PRFVWC 439
Query: 1004 DSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEP 1063
D RL+Q+L + LS ++ F P GG + ++ DQ L + ++ G GI +
Sbjct: 440 DPARLRQILTNLLSNALKFTPTGGVV----TMVADQAPAGAGLVFT---VSDTGIGIDKA 492
Query: 1064 LLDQMFGS--EGDTSEE------GISLLISRKLVKLMNGDVQYLREAGK-STFIVSVELA 1114
+ +F + D+S G+ L I++ LV+LM G + E G +TF V + L
Sbjct: 493 KQESIFEMFRQADSSTTRIYGGTGLGLAITKGLVELMGGTIAVESEPGSGATFSVCLPLE 552
Query: 1115 AA 1116
A
Sbjct: 553 PA 554
>TIGR_CMR|CHY_1856 [details] [associations]
symbol:CHY_1856 "sensor histidine kinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0023014
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 RefSeq:YP_360676.1
ProteinModelPortal:Q3AB08 STRING:Q3AB08 GeneID:3728338
KEGG:chy:CHY_1856 PATRIC:21276811 eggNOG:COG4191
HOGENOM:HOG000087242 KO:K02482 OMA:FRIRWIN ProtClustDB:CLSK941330
BioCyc:CHYD246194:GJCN-1855-MONOMER Uniprot:Q3AB08
Length = 602
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 64/270 (23%), Positives = 114/270 (42%)
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGI-IFSR 914
D G + F F+ + +++Q +E+ A L A A +I NPL+ + ++
Sbjct: 336 DEIGQLVDAFNFM---TQQIKQKSAELIQTEKMAALGLLA-AGVAHEINNPLATVSAYAE 391
Query: 915 KMMEGTELGAEQKRLLHTSAQCQR-------QLHKXXXXXXXXXXXXXXXXXEMVEFTLN 967
++E + E R LH S + R Q+ + M++ LN
Sbjct: 392 DLLE--RIAEEDVRELHRSGELARYLQVIGKQIERCKKITGSLLNFARQPAGHMIDINLN 449
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-G 1026
E+L +++ V + GI++ E + + GD +LQQVL + + +++ + G
Sbjct: 450 ELLEDTLALVNHRIKQLGIQVEKEFNVDL--PVVKGDLSQLQQVLLNIIGNALDAMETTG 507
Query: 1027 GQL-MVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSE----EGIS 1081
G+L +V+ KD L ++I G GI + L ++F T G+
Sbjct: 508 GRLKLVTEKREKD----------LVIKIIDTGTGIAQEELKRVFDPFYTTKPLGKGTGLG 557
Query: 1082 LLISRKLVKLMNGDVQYLREAGKSTFIVSV 1111
L I +VK M GD+Q GK T + +
Sbjct: 558 LSICYGIVKEMKGDIQISSSLGKGTTVTII 587
>DICTYBASE|DDB_G0282927 [details] [associations]
symbol:dhkL "histidine kinase L" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 dictyBase:DDB_G0282927
GO:GO:0005525 GO:GO:0005524 GenomeReviews:CM000153_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 EMBL:AAFI02000049 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
EMBL:AF362373 EMBL:AF258796 RefSeq:XP_639305.1
ProteinModelPortal:Q54RP6 EnsemblProtists:DDB0191389 GeneID:8623876
KEGG:ddi:DDB_G0282927 OMA:FIERNDT Uniprot:Q54RP6
Length = 1709
Score = 114 (45.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 58/245 (23%), Positives = 103/245 (42%)
Query: 874 ELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTS 933
E + L ++ E++ L RL +++ IR P+S II ++ T L Q L
Sbjct: 817 EESKTLEQNKIIEKSRL-RLSMMSH---DIRTPMSNIIGMADLLLDTSLSQHQHHYLEII 872
Query: 934 AQCQRQLHKXXXXXXXXXXXXXXXXX-EMVEFTLNEVLVASISQVMMKSNAKGIRIVNET 992
L + F N + + + + +KG+ +++
Sbjct: 873 KNSSNTLLTIINDILDISKIEAGKLDIDYESFDFNATVSQVVESMAQRVQSKGLELLSYV 932
Query: 993 AEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+I + L G S RL Q+L + L S+ F G ++ + L D+ + +++R
Sbjct: 933 DPKIPN-ILIGPSSRLNQILTNLLGNSLKFTDKG-EISICC-LLNDETDSEYEIK-VDVR 988
Query: 1053 ITHAGGGIPE---PLLDQMFG-SEGDTSEE----GISLLISRKLVKL-MNGDVQYLREAG 1103
T G GI + PLL + F +EG + + G+ L I ++LV L NG++ + G
Sbjct: 989 DT--GIGIKKEALPLLFKAFTQAEGTITRQYGGSGLGLAICKELVHLAFNGEISVESQYG 1046
Query: 1104 K-STF 1107
STF
Sbjct: 1047 HGSTF 1051
Score = 73 (30.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
+L ++ + L+ T +MV IE + + D G + N +E+TG + + +GK F
Sbjct: 688 NLHLKKAESLKDATRKMVTCIENSPDCVEIWDPSGHIQYLNLAFSEMTGFARWELLGKEF 747
Query: 662 LTLVEDSSI 670
L++++ I
Sbjct: 748 SNLIDNTEI 756
>DICTYBASE|DDB_G0269204 [details] [associations]
symbol:dhkE "histidine kinase E" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0269204
GO:GO:0016021 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0023014 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 EMBL:AF362375 RefSeq:XP_645937.1
ProteinModelPortal:Q55E44 EnsemblProtists:DDB0191265 GeneID:8616881
KEGG:ddi:DDB_G0269204 OMA:KEKRFRN Uniprot:Q55E44
Length = 1699
Score = 133 (51.9 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
A +L A R +E+ ++ L ++R P++GI+ S ++++G++L Q+ L
Sbjct: 651 AKKKLMIADQALRRAEELNQAKINFLTTVSHEVRTPINGILASVEILDGSQLDVTQRDFL 710
Query: 931 HTSAQ-CQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIV 989
Q L + VEF L +L SI+ V + +GI ++
Sbjct: 711 SCIKQSADYLLDLITDILDFSKIEAGKFELDRVEFNLITMLEESINIVYRTAQERGIEVL 770
Query: 990 NETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQS 1043
+ L GD R++Q + +FLS +I F + GQ+MV S+ DQ+ +
Sbjct: 771 TFIDPDVPI-ILIGDPYRVKQCVLNFLSNAIKFT-HKGQVMVKVSIV-DQINNN 821
Score = 63 (27.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 1049 LELRITHAGGGIPEPLLDQMF-------GSEGDTSEEGISLLISRKLVKLMNGDV 1096
L + +G GI E +LD +F GS G+ L IS+KL LM G++
Sbjct: 876 LSFSVEDSGVGIKEEVLDCLFTPFHQLGGSPRKYLGTGLGLSISKKLTTLMGGEI 930
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 819 IVLNKAMSGQDPEKVPFGFFARNGKYAECLL 849
++LN Q+ + GFF RN K E L
Sbjct: 103 VILNNNFLKQNKK----GFFKRNKKMIEIFL 129
>TIGR_CMR|CHY_0935 [details] [associations]
symbol:CHY_0935 "sensory box histidine kinase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0004673 "protein histidine kinase activity" evidence=ISS]
InterPro:IPR000014 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013767
Pfam:PF00512 Pfam:PF00989 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50112 SMART:SM00091 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0023014
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 GO:GO:0000160 RefSeq:YP_359782.1
ProteinModelPortal:Q3ADK2 STRING:Q3ADK2 GeneID:3726552
KEGG:chy:CHY_0935 PATRIC:21275005 OMA:LERSILM
BioCyc:CHYD246194:GJCN-934-MONOMER Uniprot:Q3ADK2
Length = 406
Score = 116 (45.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 76/329 (23%), Positives = 132/329 (40%)
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
EVFG KN E F VL +++ D K F N E CV +
Sbjct: 80 EVFGITKEEILGKNYEIFFQKFGVLERSIL-MDSLKYKKTFEVENYPI-EVKNCVKRFWG 137
Query: 857 R-------EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAY-TKRQIRNPLS 908
+ +G ++G L L + +Q L + L Q +K +A T +IRNPL+
Sbjct: 138 KSYPLFGPKGEISGAV--LVLWDTKDKQIL-TRELINQEKFSVVKTIATGTAHEIRNPLT 194
Query: 909 GIIFSRKMMEGTELG-AEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLN 967
+ +++ +L E K L+T Q ++++ + F LN
Sbjct: 195 TVKGFIQLLGQEKLNDPESKVFLNTVLQ---EINRIEKIISELLILGSDKGLKKTFFNLN 251
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
++ + + I IV A+++ YGD L + L+ + + G
Sbjct: 252 YLIEKVVENFTPTAYLNNISIVKNLAKEL--PLFYGDEESLYLAITSILNNAFEALQKDG 309
Query: 1028 QLMVSSSLTKDQLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSEEG--ISLLIS 1085
+++ T + G + + LRI G GIPE L ++F T EG + L I
Sbjct: 310 VIVIE---TFYEHGSNE----IGLRIADNGPGIPEELRSKIFEPFFTTKPEGTGLGLAIC 362
Query: 1086 RKLVKLMNGDVQ-YLREAGKSTFIVSVEL 1113
+ ++ G+++ Y E G +TF +++ L
Sbjct: 363 YRTIEEHGGEIRVYNNETGGATFEITLPL 391
Score = 54 (24.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 20/87 (22%), Positives = 43/87 (49%)
Query: 575 LQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDV 634
L LIL F G L K+ SK + ++ + +T +++ + I+A+D
Sbjct: 13 LTLIL--VFNQKGLFTLSIKN--SKKSKI-LKKILSFNRLTYLYFTILDNSPNIIIAIDK 67
Query: 635 DGLVNGWNTKIAELTGLSVDKAIGKHF 661
+ V N++ E+ G++ ++ +GK++
Sbjct: 68 NNKVIFLNSRAEEVFGITKEEILGKNY 94
>DICTYBASE|DDB_G0280961 [details] [associations]
symbol:dhkA "histidine kinase A" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=TAS] [GO:0009784 "transmembrane receptor histidine kinase
activity" evidence=IGI] [GO:0006468 "protein phosphorylation"
evidence=IGI] [GO:0051344 "negative regulation of cyclic-nucleotide
phosphodiesterase activity" evidence=TAS] [GO:0030435 "sporulation
resulting in formation of a cellular spore" evidence=IEA;IMP]
[GO:0019933 "cAMP-mediated signaling" evidence=IMP] [GO:0005524
"ATP binding" evidence=IEA;TAS] [GO:0031150 "sorocarp stalk
development" evidence=IMP] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;ISS] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA;ISS] [GO:0000155
"phosphorelay sensor kinase activity" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004673 "protein histidine
kinase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013655
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF08447 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 EMBL:U42597
InterPro:IPR001610 dictyBase:DDB_G0280961 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0009897 GenomeReviews:CM000152_GR
GO:GO:0019933 EMBL:AAFI02000040 GO:GO:0030435 GO:GO:0009736
SMART:SM00086 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
InterPro:IPR006189 Pfam:PF03924 SMART:SM01079 PROSITE:PS50839
GO:GO:0051344 GO:GO:0031150 PIR:S71629 RefSeq:XP_640889.1
HSSP:Q9WZV7 ProteinModelPortal:Q54U87 EnsemblProtists:DDB0215354
GeneID:8622946 KEGG:ddi:DDB_G0280961 OMA:KERENNW GO:GO:0009784
Uniprot:Q54U87
Length = 2150
Score = 153 (58.9 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 60/249 (24%), Positives = 109/249 (43%)
Query: 870 LASHELQQALHVQRLSEQTALKRLKALAYT-KRQIRNPLSGIIFSRKMMEGTELGAEQKR 928
+ S + Q L +++ + + A K A T ++R PLSG+I ++ T L EQ+
Sbjct: 1364 MTSRKDMQRLILEKEAAEEANKAKSAFVATVSHEVRTPLSGVIGVSDLLLETNLSEEQRD 1423
Query: 929 LLHT-SAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIR 987
+ T Q L E + F++ E A I + + +N +
Sbjct: 1424 YVQTIQKSSQALLTIINDILDYSKLESRQLKMETLPFSIIETCQAVIHMLSVAAN-DDVD 1482
Query: 988 IVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM-VSSSLTKDQLGQSVHL 1046
I+ + ++GD++R++QVL + LS +I F G L +S + +
Sbjct: 1483 ILLRVPPNV-PRIIFGDAMRMRQVLLNLLSNAIKFTSRGHVLTDISVDDSIPPTNTEEEI 1541
Query: 1047 AYLELRITHAGGGIPEPLLDQMFG--SEGDTSEE------GISLLISRKLVK-LMNGDVQ 1097
+L + I G GIP+ L D +F S+ D S G+ L I+++L++ +M G +Q
Sbjct: 1542 IHLCITIEDTGIGIPQSLFDSIFEPFSQADNSTTRKYGGTGLGLSITKRLIEEVMGGTIQ 1601
Query: 1098 YLREAGKST 1106
G+ +
Sbjct: 1602 VSSIVGQGS 1610
Score = 42 (19.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 42 SFDYS-NSVRVSSTAGGDQQPRSD 64
SFD + N++ ST GG+ PRS+
Sbjct: 330 SFDGNINTITEEST-GGNNSPRSN 352
Score = 40 (19.1 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 238 RVMAYKFHEDDHGEVVSEITKS 259
+ +A H DD + +SEI K+
Sbjct: 1292 KFLAELIHPDDKQKFISEIKKT 1313
Score = 39 (18.8 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 10/49 (20%), Positives = 24/49 (48%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVR 50
++S + +S+N ++ + T +K H+ +ET+ S S++
Sbjct: 224 NNSNNSNNSNNNNNGNNNNNITDSPT-KSKRHSTYETNIGSHQRRKSIQ 271
>TIGR_CMR|SPO_0163 [details] [associations]
symbol:SPO_0163 "sensory box histidine kinase/response
regulator" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0005622
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
RefSeq:YP_165433.1 ProteinModelPortal:Q5LWV8 GeneID:3194882
KEGG:sil:SPO0163 PATRIC:23373573 HOGENOM:HOG000121933 OMA:WNMSQLE
ProtClustDB:CLSK835598 Uniprot:Q5LWV8
Length = 823
Score = 120 (47.3 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 60/254 (23%), Positives = 108/254 (42%)
Query: 874 ELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTS 933
+L++A + Q + L +++ ++R PL+GI+ S +ME EL +Q RL+
Sbjct: 333 DLREARDTAQAGAQAKAQLLTVMSH---EMRTPLNGILGSLDLMERDELSPKQVRLVRAI 389
Query: 934 AQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNE-VLVASISQVMMKSNAKGIRIVNET 992
R + M+EF L+ + ++ A N
Sbjct: 390 ----RVSGELLLTQVNRVLDLSRLESGMIEFPKEPFALLPMVRRLTESLTAAAEERGNRL 445
Query: 993 AEQIMSE---TLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYL 1049
++ + + G+ I LQQ L + L +I F NG + L D++ +
Sbjct: 446 QTTLVGDDPGVVLGNRIALQQALVNLLGNAIKFTRNGEISLEVERLNDDRM--------I 497
Query: 1050 ELRITHAGGGIPEPLLDQMFGS--EGDTS--EE----GISLLISRKLVKLMNGDVQY--L 1099
E RI+ G GIP ++++F DT+ E G+ L I+R+LV M G+++ +
Sbjct: 498 EFRISDTGLGIPAKDIERIFDEFVTIDTAYARENPGTGLGLSITRRLVWAMGGEIEVESI 557
Query: 1100 REAGKSTFIVSVEL 1113
G S F++ + L
Sbjct: 558 EHEG-SLFLIRLPL 570
Score = 61 (26.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLV 665
E EAV S +++A +L VD +G + +N + G S +A+G+ L+
Sbjct: 203 EKEAVKSRFEAAVKSALDAVLVVDTEGHIIEFNGGAEAMFGYSRSEALGQPMSDLI 258
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343
A V+ + E LT+ ++ RA + L+ E + +A V+ ++V
Sbjct: 133 AHLVEQVSPEVRDLALTIVNTSARAADTQRLKVSETLRRLALSVLGLLV 181
>UNIPROTKB|Q4K894 [details] [associations]
symbol:gacS "Sensor protein GacS" species:220664
"Pseudomonas protegens Pf-5" [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000076 GenomeReviews:CP000076_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
HOGENOM:HOG000272329 KO:K07678 InterPro:IPR019247 Pfam:PF09984
RefSeq:YP_261539.1 ProteinModelPortal:Q4K894 STRING:Q4K894
GeneID:3478570 KEGG:pfl:PFL_4451 PATRIC:19878334 OMA:HHIEIAT
ProtClustDB:CLSK866224 BioCyc:PFLU220664:GIX8-4486-MONOMER
Uniprot:Q4K894
Length = 917
Score = 138 (53.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 59/244 (24%), Positives = 114/244 (46%)
Query: 884 LSEQTALK--RLKA--LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHT-SAQCQR 938
L+ + AL+ R+K+ LA +IR PL+GI+ +++ +EL Q L T
Sbjct: 273 LARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQLDYLGTIEKSADS 332
Query: 939 QLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMS 998
L + + F L ++L +++ + ++AK + +V+
Sbjct: 333 LLGIINEILDFSKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPL 392
Query: 999 ETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELRITHAGG 1058
+L GD +RL+Q+L + +S +I F G +V+ ++ +++ SV L + I G
Sbjct: 393 -SLVGDPLRLKQILTNLVSNAIKFTREG--TIVARAMLEEEHEDSVQL---RISIQDTGI 446
Query: 1059 GIPEPLLDQMFG--SEGDTSEE------GISLLISRKLVKLMNGDVQYLREAGK-STFIV 1109
G+ + +F S+ D S G+ L+IS++L++ M G++ G+ S F +
Sbjct: 447 GLSNQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSEFWI 506
Query: 1110 SVEL 1113
S+ L
Sbjct: 507 SLNL 510
Score = 39 (18.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 19/86 (22%), Positives = 42/86 (48%)
Query: 622 IETATVPILAVDVDGLVNGWNTKIAELTGL------SVDKA---IGKHFLTL-VEDSSID 671
+ET P+ + ++D L +G N + L S+D+A + ++ T+ +++ +D
Sbjct: 213 LETRLPPLGSQELDELASGINRMASTLQNAQEELQHSIDQATEDVRQNLETIEIQNIELD 272
Query: 672 TVKRMLYLALQGQEE--QNIQFEIKT 695
++ A + + E N+ EI+T
Sbjct: 273 LARKEALEASRIKSEFLANMSHEIRT 298
>TIGR_CMR|GSU_2916 [details] [associations]
symbol:GSU_2916 "sensor histidine kinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 RefSeq:NP_953958.2
ProteinModelPortal:Q748T5 GeneID:2688556 KEGG:gsu:GSU2916
PATRIC:22028691 HOGENOM:HOG000276323 ProtClustDB:CLSK924647
BioCyc:GSUL243231:GH27-2919-MONOMER Uniprot:Q748T5
Length = 496
Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
Identities = 55/250 (22%), Positives = 106/250 (42%)
Query: 868 LQLASHELQQALHVQRLSEQTALKRLKALAY-TKRQIRNPLSGIIFSRKMMEGTELGAEQ 926
L A EL+Q H Q++ L + +A +I+NPL+GI + ++ + E
Sbjct: 247 LDKAKQELEQ-YHFQQMERADRLASVGEMAAGIAHEIKNPLAGISAAMTIIR-QDFQEED 304
Query: 927 KRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGI 986
R + Q+++ E LN+VL ++ + K I
Sbjct: 305 PRR-EIIGEVIEQVNRLDKTVNDLLFFGKPTHPEPAPTDLNDVLRKTLLFALQHKGGKNI 363
Query: 987 RIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GGQLMVSSSLTKDQLGQSVH 1045
E E + ++ D ++QQV+ + + +I + GG L V+S + + + G
Sbjct: 364 EKRLELQEPL--PLVFVDPKQVQQVVLNLILNAIQAMQETGGTLTVASRIAEREGG---- 417
Query: 1046 LAYLELRITHAGGGIPEPLLDQMFGSEGDTSEEG--ISLLISRKLVKLMNGDVQYLREAG 1103
++ + + G GIPEP++ ++F T +G + L I +KL+ G +
Sbjct: 418 -LWVRVEVADTGPGIPEPIISKIFTPFFTTKAQGTGLGLAICQKLITQHGGTLHVSSVLN 476
Query: 1104 KSTFIVSVEL 1113
+ T + S++L
Sbjct: 477 QGT-VFSIDL 485
>TIGR_CMR|SPO_0132 [details] [associations]
symbol:SPO_0132 "sensor histidine kinase/response
regulator" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936 RefSeq:YP_165404.1
ProteinModelPortal:Q5LWT5 GeneID:3196450 KEGG:sil:SPO0132
PATRIC:23373509 HOGENOM:HOG000250541 OMA:RRLWHSI
ProtClustDB:CLSK933165 Uniprot:Q5LWT5
Length = 739
Score = 125 (49.1 bits), Expect = 0.00065, P = 0.00065
Identities = 65/270 (24%), Positives = 112/270 (41%)
Query: 853 KKLDREGAVTGVFCF-LQLASHELQQA-LHVQRLSEQTALKRLKA-LAYTKRQIRNPLSG 909
K +D+ G V L + S +A L R + A + A LA +IR P++G
Sbjct: 174 KMIDQRGHGGDVVSLALNITSTVRYEAELRAAREKAEAANRAKSAFLANMSHEIRTPMNG 233
Query: 910 IIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVE-FTLNE 968
++ +++ T L EQ+ T L E F L
Sbjct: 234 VVGMAELLCDTALDEEQQLYASTIKNSGEALLVIINDVLDYSKIEAEKMMLHPEPFDLER 293
Query: 969 VL--VASISQVMMKSNAKGIRIVNETAEQIMSETLY-GDSIRLQQVLADFLSISINFVPN 1025
+ VA + Q +++ KG+ ++ + + TL+ GD R++QVL + L ++ F
Sbjct: 294 CIHEVAMLMQPIVRD--KGLTLLVDY--DLFLPTLFVGDPGRVRQVLTNLLGNAVKFTTK 349
Query: 1026 GGQLMVSSSLTKDQLGQ-SVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSEE------ 1078
G L+ + + G+ ++H+A I G GIP L +FG E
Sbjct: 350 GHILIRVTGVPDPATGRCAIHVA-----IEDTGIGIPREKLAHIFGEFNQVENERNRQFD 404
Query: 1079 --GISLLISRKLVKLMNGDVQYLREAGKST 1106
G+ L IS++L+++M G V E G+ +
Sbjct: 405 GTGLGLAISQRLIQMMGGTVWVESEEGRGS 434
>UNIPROTKB|Q06904 [details] [associations]
symbol:sasA "Adaptive-response sensory-kinase SasA"
species:1140 "Synechococcus elongatus PCC 7942" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_01837 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR011649 InterPro:IPR023527 Pfam:PF00512 Pfam:PF02518
Pfam:PF07689 PRINTS:PR00344 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0048511 GO:GO:0023014
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
EMBL:CP000100 GenomeReviews:CP000100_GR EMBL:D14056 PIR:JN0793
RefSeq:YP_401131.1 PDB:1T4Y PDB:1T4Z PDBsum:1T4Y PDBsum:1T4Z
ProteinModelPortal:Q06904 SMR:Q06904 IntAct:Q06904 STRING:Q06904
GeneID:3774333 KEGG:syf:Synpcc7942_2114 PATRIC:23789717
HOGENOM:HOG000233315 KO:K08479 ProtClustDB:PRK09303
BioCyc:SELO1140:GJWQ-2145-MONOMER EvolutionaryTrace:Q06904
Uniprot:Q06904
Length = 387
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 60/255 (23%), Positives = 106/255 (41%)
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS------RKMMEGTELGA 924
A +LQQ LSE+T + +A +RNPL+ + + R
Sbjct: 134 AFFQLQQ--QYADLSERTKFLE-QVIALVAHDLRNPLTAALLAVDTIQIRSQSFSVATAK 190
Query: 925 EQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKS--- 981
E + L Q + QL + E + EV+ + Q +++
Sbjct: 191 EMQGLCSLFDQARSQLREIERMIAEILEATRHSG-ESLRINPREVVFEPLLQQVLEQLHE 249
Query: 982 --NAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQ 1039
+K +++ + + TLY D RL+QVL + L +I + P GG + +++ +
Sbjct: 250 RWRSKQQQLITDVPGDL--PTLYADPDRLRQVLVNLLDNAIKYTPPGGTITIAAL---HR 304
Query: 1040 LGQSVHLAYLELRITHAGGGIPEPLLDQMFGS----EGDTSEEG--ISLLISRKLVKLMN 1093
Q V ++ I+ G GIP L +F + D+S+EG I L + +++V+
Sbjct: 305 TSQKVQIS-----ISDTGSGIPRDQLSVIFKNLVRLSRDSSQEGYGIGLSVCQRIVQAHF 359
Query: 1094 GDVQYLREAGK-STF 1107
G + E G+ STF
Sbjct: 360 GRIWVASELGQGSTF 374
>DICTYBASE|DDB_G0277887 [details] [associations]
symbol:dhkK "histidine kinase K" species:44689
"Dictyostelium discoideum" [GO:0031154 "culmination involved in
sorocarp development" evidence=IMP] [GO:0019933 "cAMP-mediated
signaling" evidence=IMP] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0023014 "signal transduction by phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 dictyBase:DDB_G0277887 GO:GO:0016021
GO:GO:0005524 GO:GO:0005635 GO:GO:0006355 GenomeReviews:CM000152_GR
GO:GO:0019933 EMBL:AAFI02000023 GO:GO:0031965 GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
GO:GO:0031154 EMBL:AF362376 EMBL:AY263399 RefSeq:XP_642392.1
ProteinModelPortal:Q86CZ2 EnsemblProtists:DDB0214934 GeneID:8621597
KEGG:ddi:DDB_G0277887 OMA:SDIDEAN Uniprot:Q86CZ2
Length = 1213
Score = 127 (49.8 bits), Expect = 0.00073, P = 0.00073
Identities = 52/218 (23%), Positives = 95/218 (43%)
Query: 892 RLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQKRLLHTSAQC-QRQLHKXXXXXXX 949
R + LA +IR PL+G+I + + + L E+K + C L
Sbjct: 816 RQEFLATMSHEIRTPLNGLIGMATLLRDSHNLPPEEKTMAKAVKSCGDILLRLVNDILDL 875
Query: 950 XXXXXXXXXXEMVEFTLNEVLVASISQVMM-KSNAKGIRIVNETAEQIMSETLYGDSIRL 1008
E + F + E L I V+ ++N K I + E +++I S L GDS R+
Sbjct: 876 SKLEANQMGLEHIPFRMRE-LTQQICHVLSGQANEKNIHLSCEVSDKIPS-ILLGDSGRI 933
Query: 1009 QQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLA-Y-LELRITHAGGGIPEPLLD 1066
Q+L + ++ F +G ++ + ++ S+ Y + R+ G G+P
Sbjct: 934 LQILMNLTGNALKFTQSGYVKIIIDLIEEESELVSLKKGEYNISFRVKDTGIGVPVESHQ 993
Query: 1067 QMFGS--EGDTSEE------GISLLISRKLVKLMNGDV 1096
++F + + D S+ G+ L + KLV+LM G++
Sbjct: 994 KIFEAFVQADPSDSRKYGGSGLGLYLCAKLVRLMKGEI 1031
>TIGR_CMR|GSU_1004 [details] [associations]
symbol:GSU_1004 "sensory box histidine kinase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
HOGENOM:HOG000262169 KO:K07708 InterPro:IPR013656 Pfam:PF08448
RefSeq:NP_952058.1 ProteinModelPortal:Q74EF8 GeneID:2686090
KEGG:gsu:GSU1004 PATRIC:22024780 OMA:ICQKIVT ProtClustDB:CLSK828130
BioCyc:GSUL243231:GH27-990-MONOMER Uniprot:Q74EF8
Length = 363
Score = 105 (42.0 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 60/266 (22%), Positives = 116/266 (43%)
Query: 859 GAVTGVFCFLQ-LAS-HELQQAL-HVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
G TG L+ + S EL+ A+ + RLS L LA+ +I+NPL GI + +
Sbjct: 107 GETTGTILVLRDITSIRELEDAVRNADRLSTLGTLAA--GLAH---EIKNPLGGIKGAAQ 161
Query: 916 MMEGTELGAEQKRLLHTSAQCQ-RQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASI 974
++E EL E + L + + +++ + ++ + L++V+ +
Sbjct: 162 LLE-LELPTESE--LRDNVRIMLKEVERVNRIVEELLALASPRGLQLSKVNLHKVIGDIL 218
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSS 1034
+ + K + +G + + + D L Q+ + + ++ V +GG + V+S
Sbjct: 219 T--LQKRSTEGKNVAFQQQFDPSIPPILADEGLLTQLFLNLVKNAMEAVDDGGCIRVASR 276
Query: 1035 LTKD----QLGQSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSEEG--ISLLISRKL 1088
+ D Q G+ + + + G GIP L+Q+F T +G + L I +K+
Sbjct: 277 VISDYSMTQKGER-RSRMVAIDVADDGPGIPPERLEQLFTPFFTTKTKGTGLGLAICQKI 335
Query: 1089 VKLMNGDVQYLREAGK-STFIVSVEL 1113
V G ++ GK +TF V + L
Sbjct: 336 VTEHRGMIKVESYPGKGTTFTVMLPL 361
Score = 61 (26.5 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 22/124 (17%), Positives = 52/124 (41%)
Query: 618 MVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSI--DTVKR 675
+ +I++ ++ +D+DG + N E++G+S +A+G F + ++ + V +
Sbjct: 11 LATVIDSVGDGVIVIDLDGRIALMNPAAEEISGISRRQAVGHRFALVFHREAVLREMVGK 70
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
+ + +NI + ++ L++ H G V +DIT +
Sbjct: 71 TATSGMTISDHENIVIRKLKQLTPVSATTFPLMLP-------HGETTGTILVLRDITSIR 123
Query: 736 TVMD 739
+ D
Sbjct: 124 ELED 127
>TIGR_CMR|CBU_1084 [details] [associations]
symbol:CBU_1084 "sensory box sensor histidine
kinase/response regulator" species:227377 "Coxiella burnetii RSA
493" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013655 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
Pfam:PF08447 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 RefSeq:NP_820083.1
ProteinModelPortal:Q83CM8 PRIDE:Q83CM8 GeneID:1208985
KEGG:cbu:CBU_1084 PATRIC:17930899 HOGENOM:HOG000027065 OMA:HWINETS
ProtClustDB:CLSK914528 BioCyc:CBUR227377:GJ7S-1076-MONOMER
Uniprot:Q83CM8
Length = 683
Score = 123 (48.4 bits), Expect = 0.00097, P = 0.00097
Identities = 57/258 (22%), Positives = 113/258 (43%)
Query: 870 LASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRL 929
L EL +A + +EQ + LA ++R PL+ I+ ++++ L EQ+
Sbjct: 287 LREKELWEA---KEFAEQANRTKSDFLAMMSHELRTPLNAILGMSQILKTHNLSDEQQGQ 343
Query: 930 LHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVE-FTLNEVLVASISQVMMKSNAKGIRI 988
+ +Q + L E L+E+++ +++ ++ KGI++
Sbjct: 344 IDVISQAGQNLLALLNDLLDFAKLEAGKLSFTEETMDLHELVMKIKGDMLLLAHKKGIQL 403
Query: 989 VNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAY 1048
+ E I S+ + GD+ R++QVL + LS ++ F G + ++ L KD + + L +
Sbjct: 404 KFDYPENIPSKVM-GDAKRIRQVLVNLLSNALKFTEKGYVQLTANCLKKDH--KKMTLCF 460
Query: 1049 LELRITHAGGGIPEPLLDQMFG------SEGDTSEEGISLLIS--RKLVKLMNGDVQYLR 1100
+ G G+ + L +F S +G+ L +S ++L++ M G +
Sbjct: 461 T---VKDTGIGMEKTKLSSIFNRFQQINSVYQRKYDGVGLGLSIVKELLEKMGGTISVTS 517
Query: 1101 EAG---KSTFIVSVELAA 1115
E G + T I+ L A
Sbjct: 518 EPGVGSEFTCIIPFRLQA 535
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1117 1082 0.00086 123 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 626 (67 KB)
Total size of DFA: 470 KB (2223 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.47u 0.17s 85.64t Elapsed: 00:00:04
Total cpu time: 85.50u 0.17s 85.67t Elapsed: 00:00:04
Start: Fri May 10 23:51:06 2013 End: Fri May 10 23:51:10 2013