Your job contains 1 sequence.
>001236
MADLVSYGNADRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGERS
LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLK
ALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISS
PTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDCDALG
DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR
QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG
DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG
VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG
DKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP
NADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP
ALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLV
HCHSCSSRKALRAALAPNPGKPYRVCDCCFAKLNKVSEASNRRNSLPRLSGENKDRLDKS
DLKLSKSAMPSNVDLIKQLDCKAAKQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRR
TTPKPILAPSGVSSRSVSPFSRRPSPPRSATPVPTTSGLSFSKSITDSLKKTNELLNQEV
LKLRAQVESLRQRCEFQELELQKSTKKAQEAMAVAAEESSKAKAAKDVIKSLTAQLKDMA
ERLPPGVYDPENMRPAYIPNGLETNGVHYSDMNGERHSRSDSVSSSILAFPTGVDSVSNN
GTGGLSQFLRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDSENGTR
PRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSE
NREKVYERYNVRGLDKSSASGQAARRPEGTLSPTSQT
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001236
(1117 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 3841 0. 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 3598 0. 2
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 1977 3.3e-278 4
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 1812 2.1e-276 4
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 1495 7.1e-178 3
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 1664 9.2e-178 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 496 2.3e-46 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 514 2.5e-43 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 515 2.9e-43 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 514 3.7e-43 2
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 522 3.4e-42 3
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 491 1.7e-41 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 491 1.7e-41 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 491 3.3e-41 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 500 4.0e-41 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 496 4.2e-41 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 496 4.2e-41 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 515 4.9e-41 3
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 510 5.3e-41 3
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 491 5.5e-41 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 515 6.3e-41 3
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 491 1.8e-40 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 484 3.9e-40 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 484 4.0e-40 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 490 7.2e-40 3
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 449 1.5e-38 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 441 8.3e-38 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 441 8.4e-38 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 440 1.1e-37 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 439 1.4e-37 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 320 2.7e-37 3
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 431 1.0e-36 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 430 1.3e-36 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 426 3.5e-36 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 425 2.5e-35 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 423 4.1e-35 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 391 4.2e-35 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 416 4.3e-35 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 415 9.4e-35 2
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 412 1.2e-34 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 410 1.4e-34 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 382 3.9e-34 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 410 4.2e-34 2
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 402 6.6e-33 2
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 390 2.6e-32 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 388 4.6e-32 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 393 1.2e-31 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 347 2.2e-30 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 376 8.9e-30 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 379 9.6e-30 2
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 363 2.2e-29 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 361 3.5e-29 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 351 6.0e-29 1
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 345 7.0e-29 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 358 1.5e-28 2
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 346 2.2e-28 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 346 1.5e-27 1
UNIPROTKB|Q86SG6 - symbol:NEK8 "Serine/threonine-protein ... 342 1.7e-27 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 346 8.6e-27 2
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 313 9.3e-27 1
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 334 1.3e-26 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 332 2.1e-26 1
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 332 2.1e-26 1
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 327 2.3e-26 1
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 331 2.8e-26 1
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 321 7.7e-26 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 319 2.1e-25 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 318 2.7e-25 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 323 4.5e-25 1
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 315 5.4e-25 1
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 319 5.4e-25 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 315 5.9e-25 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 315 7.6e-25 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 320 9.8e-25 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 319 1.2e-24 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 312 1.3e-24 1
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 312 1.3e-24 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 312 1.3e-24 1
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 314 2.0e-24 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 317 2.1e-24 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 291 2.1e-24 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 316 2.5e-24 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 309 2.8e-24 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 312 6.9e-24 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 310 1.0e-23 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 300 1.5e-23 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 306 3.0e-23 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 306 3.0e-23 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 306 3.2e-23 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 216 7.0e-23 2
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 216 7.0e-23 2
ZFIN|ZDB-GENE-020509-1 - symbol:nek8 "NIMA (never in mito... 299 8.5e-23 1
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 298 1.0e-22 2
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 291 1.3e-22 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 273 1.8e-22 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 271 2.9e-22 1
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 299 3.6e-22 2
UNIPROTKB|I3L8I2 - symbol:LOC100737658 "Uncharacterized p... 291 5.9e-22 1
UNIPROTKB|I3L5B6 - symbol:LOC100737658 "Uncharacterized p... 291 6.0e-22 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 281 2.0e-21 1
WARNING: Descriptions of 208 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 3841 (1357.2 bits), Expect = 0., P = 0.
Identities = 755/1113 (67%), Positives = 853/1113 (76%)
Query: 1 MADLVSYGNADRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGERS 60
MADLV+Y NAD ++EQALI LKKG QLLKYGRKGKPKFYPFRLS+DE SLIWISSSGE+
Sbjct: 1 MADLVTYSNADHNLEQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKR 60
Query: 61 LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLK 120
LKLASVSKI+PGQRTAVFQRYLRPEKDYLSFSL+YN K+SLDLICKDKVEAE+WI GLK
Sbjct: 61 LKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLK 120
Query: 121 ALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISS 180
LIS+GQGGRSKIDGW+ GGL ++ SR+LTS+S S SS S +R SSP +++ PI+S
Sbjct: 121 TLISTGQGGRSKIDGWSGGGLSVDASRELTSSSPSSSSASASRGHSSPGTPFNID-PITS 179
Query: 181 PTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPDDCDALG 240
P S + E +SE+SHVA DN NMQ K SGSD FRV A DD DALG
Sbjct: 180 PKSAEPEVP-PTDSEKSHVALDNKNMQTKVSGSDGFRVSVSSAQSSSSHGSAADDSDALG 238
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DVYIWGEVICDNVVK G DKN +YL TR DVL+P+PLESN+VLDVH IACGVRHAA VTR
Sbjct: 239 DVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTR 298
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS-VDFVTCGEFHTCAVTMAGELYTW 359
QGE+FTWGEESGGRLGHG+GKD+ P L+ESLT TS VDFV CGEFHTCAVT+AGELYTW
Sbjct: 299 QGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTW 358
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
GDGTHN GLLGHG+D+SHWIPKRI+G LEGL VASV+CGPWHTALITS G+LFTFGDGTF
Sbjct: 359 GDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTF 418
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS-SASVSSGKLFTWG 478
GVLGHGD++ V YPREVESLSGLRTIAV+CGVWHTAAVVE+IVTQS S+SVSSGKLFTWG
Sbjct: 419 GVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWG 478
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG 538
DGDKNRLGHGDK+PRLKPTCVPALIDYNFHK+ACGHSLTVGLTTSG VFTMGSTVYGQLG
Sbjct: 479 DGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG 538
Query: 539 NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRK 598
N DGKLPCLVEDKLA E VEEI+CGAYHVA LTSRNEVYTWGKGANGRLGHGD+EDRK
Sbjct: 539 NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRK 598
Query: 599 TPALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCG 658
P +VEALKDRHVKYIACGSNY+AAICLHKWVS AEQ QCS CR AFGFTRKRHNCYNCG
Sbjct: 599 VPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRLAFGFTRKRHNCYNCG 658
Query: 659 LVHCHSCSSRKALRAALAPNPGKPYRVCDCCFAKLNKVSEAS--NRRNS-LPRLSGENKD 715
LVHCHSCSS+KA RAALAP+ G+ YRVCD C+ KL+KVSE + NRRNS +PRLSGEN+D
Sbjct: 659 LVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEINDTNRRNSAVPRLSGENRD 718
Query: 716 RLDKSDLKLSKSAMPSNVDLIKQLDCKAAKQGKKADAFSLVRSSQAPSLLQLKDVVLTTA 775
RLDKS+++L+K SN+DLIKQLD KAAKQGKK D FSL R+SQ PSLLQLKD V +
Sbjct: 719 RLDKSEIRLAKFGT-SNMDLIKQLDSKAAKQGKKTDTFSLGRNSQLPSLLQLKDAVQSNI 777
Query: 776 ADLRRTTPKPILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSFSKSITDSLKKTNEL 835
D+RR TPK A GL F I D++KKTNE+
Sbjct: 778 GDMRRATPKLAQAPSGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEI 837
Query: 836 LNQEVLKLRAQVESLRQRCEFQELELQKSTXXXXXXXXXXXXXXXXXXXXXDVIKSLTAQ 895
LNQE++KLR QV+SL Q+CEFQE+ELQ S + IKSL AQ
Sbjct: 838 LNQEIVKLRTQVDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQ 897
Query: 896 LKDMAERLPPGVYDPENMRPAYIPNGLETNGVHYSDMNGERHXXXXXXXXXILAFPTGVD 955
LKD+AE+LPPG E+++ A + NGL+ NG H+ + NG H ++ D
Sbjct: 898 LKDVAEKLPPG----ESVKLACLQNGLDQNGFHFPEENGF-HPSRSESMTSSISSVAPFD 952
Query: 956 SVSNNGTGGLSQFLRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDS 1015
N + Q ++T AS R+ P S ++ S +SE E P Q
Sbjct: 953 FAFANASWSNLQSPKQTPRASERNSNAYPADPRLS----SSGSVISERIE-----PFQFQ 1003
Query: 1016 ENGTRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAE 1075
N S +++QVEAEWIEQYEPGVYITLVAL DGTRDL+RVRFSRRRFGEHQAE
Sbjct: 1004 NNSDNGSSQTGVNNTNQVEAEWIEQYEPGVYITLVALHDGTRDLRRVRFSRRRFGEHQAE 1063
Query: 1076 TWWSENREKVYERYNVRGLDKSSASGQAARRPE 1108
TWWSENREKVYE+YNVR +KS+AS R E
Sbjct: 1064 TWWSENREKVYEKYNVRVSEKSTASQTHRDRDE 1096
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 3598 (1271.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 699/1008 (69%), Positives = 796/1008 (78%)
Query: 16 QALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGERSLKLASVSKIIPGQRT 75
QALIALKKGAQLLKYGRKGKPKF PFRLSNDETSLIWIS+ GE+ LKLA+VSKI+PGQRT
Sbjct: 11 QALIALKKGAQLLKYGRKGKPKFCPFRLSNDETSLIWISNGGEKRLKLATVSKIVPGQRT 70
Query: 76 AVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDG 135
AVFQRYLRP+KDYLSFSLIY+N KR+LDLICKDKVEAEVWIAGLKALIS GQ GRSKIDG
Sbjct: 71 AVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALIS-GQAGRSKIDG 129
Query: 136 WNDGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISSPTSFQTEGSISVNSE 195
W+DGGL + DSRDLT +S ++SSV +RD + ++ S + + P + +TE S+S SE
Sbjct: 130 WSDGGLSIADSRDLTLSSPTNSSVCASRDFN---IADSPYNSTNFPRTSRTENSVS--SE 184
Query: 196 RSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPDDCDALGDVYIWGEVICDNVVK 255
RSHVASD+ NM V+G+GSD FRV APDDCDALGDVYIWGEV+C+NV K
Sbjct: 185 RSHVASDSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVLCENVTK 244
Query: 256 AGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
GADKN+ YLG+R+DVL+P+PLESNVVLDVHHIACGV+HAALV+RQGEVFTWGE SGGRL
Sbjct: 245 FGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRL 304
Query: 316 GHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV 375
GHG+GKD+ P L+ESL TS+DFV CGEFHTCAVTM GE+YTWGDGTHNAGLLGHGTDV
Sbjct: 305 GHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDV 364
Query: 376 SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPRE 435
SHWIPKRISGPLEGLQ+ASV+CGPWHTALITSTGQLFTFGDGTFGVLGHGD++ V YPRE
Sbjct: 365 SHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPRE 424
Query: 436 VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK 495
VESLSGLRTIAVACGVWH AA+VEVIVT SS+SVSSGKLFTWGDGDK+RLGHGDKEPRLK
Sbjct: 425 VESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLK 484
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLA 555
PTCV ALID+ FH+VACGHSLTVGLTTSG V+TMGSTVYGQLGNPNADGKLPCLVEDKL
Sbjct: 485 PTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLT 544
Query: 556 GESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIA 615
+ VEEIACGAYHVAVLTSRNEV+TWGKGANGRLGHGDVEDRK P LV+ALK+RHVK IA
Sbjct: 545 KDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIA 604
Query: 616 CGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAAL 675
CGSN++AAICLHKWVS EQ QCSACRQAFGFTRKRHNCYNCGLVHCHSCSS+K+L+AAL
Sbjct: 605 CGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSKKSLKAAL 664
Query: 676 APNPGKPYRVCDCCFAKLNKVSEAS--NRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNV 733
APNPGKPYRVCD C +KL+KVSEA+ +R+N +PRLSGENKDRLDK++++L+KS +PSN+
Sbjct: 665 APNPGKPYRVCDSCHSKLSKVSEANIDSRKNVMPRLSGENKDRLDKTEIRLAKSGIPSNI 724
Query: 734 DLIKQLDCKAAKQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKPILAXXXXX 793
DLIKQLD +AA+QGKKAD FSLVR+SQ P L QLKD LT ADLRR PKP A
Sbjct: 725 DLIKQLDNRAARQGKKADTFSLVRTSQTP-LTQLKDA-LTNVADLRRGPPKP--AVTPSS 780
Query: 794 XXXXXXXXXXXXXXXXXXXXXXXXGLSFSKSITDSLKKTNELLNQEVLKLRAQVESLRQR 853
GL FS SI +SLKKTNELLNQEV++LRAQ ESLR R
Sbjct: 781 SRPVSPFSRRSSPPRSVTPIPLNVGLGFSTSIAESLKKTNELLNQEVVRLRAQAESLRHR 840
Query: 854 CEFQELELQKSTXXXXXXXXXXXXXXXXXXXXXDVIKSLTAQLKDMAERLPPGVYDPENM 913
CE QE E+QKS +VIKSLTAQ+KD+A LPPG Y+ E
Sbjct: 841 CEVQEFEVQKSVKKVQEAMSLAAEESAKSEAAKEVIKSLTAQVKDIAALLPPGAYEAETT 900
Query: 914 RPAYIPNGLETNGVHYSDMNGERHXXXXXXXXXILAFPTGVDSVSNNGTGGLSQFLRETT 973
R A + NG E NG H+++ NG+R LA P + + S NG SQ R T
Sbjct: 901 RTANLLNGFEQNGFHFTNANGQRQSRSDSMSDTSLASPLAMPARSMNGLWRNSQSPRNTD 960
Query: 974 GASGRDDQPVIRLPNG--SVGVLANSSCVSESSEGK-ESMPLQDSENG 1018
+ G +R+ NG G + SS S S+ + E+ ++ E G
Sbjct: 961 ASMGELLSEGVRISNGFSEDGRNSRSSAASASNASQVEAEWIEQYEPG 1008
Score = 342 (125.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 66/87 (75%), Positives = 74/87 (85%)
Query: 1015 SENGTRPRSPALSVSS-HQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQ 1073
SE+G RS A S S+ QVEAEWIEQYEPGVYITL+AL DGTRDLKRVRFSRRRF E Q
Sbjct: 978 SEDGRNSRSSAASASNASQVEAEWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQQ 1037
Query: 1074 AETWWSENREKVYERYNVRGLDKSSAS 1100
AETWWSENRE+VYE+YN+RG D+SS +
Sbjct: 1038 AETWWSENRERVYEKYNIRGTDRSSVA 1064
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 1977 (701.0 bits), Expect = 3.3e-278, Sum P(4) = 3.3e-278
Identities = 363/597 (60%), Positives = 457/597 (76%)
Query: 197 SHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPDDCDALGDVYIWGEVICDNVVKA 256
S V + NM ++ S +D FR+ PDD ++LGDVY+WGEV + ++
Sbjct: 170 SDVGYERGNM-LRPS-TDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPD 227
Query: 257 GADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
G N + DVL PRPLESNVVLDVH I CGVRH ALVTRQGEVFTWGEE GGRLG
Sbjct: 228 GTASNET---VKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLG 284
Query: 317 HGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
HG+ DI +P L+E L +T++DFV CGE+HTC V+ +G+L++WGDG HN GLLGHG+D+S
Sbjct: 285 HGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDIS 344
Query: 377 HWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
HWIPKR+SGPLEGLQV SV CG WH+AL T+ G+LFTFGDG FGVLGHG+R++VSYP+EV
Sbjct: 345 HWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEV 404
Query: 437 ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKP 496
+SL+GL+T+ VAC +WHTAA+VEV+ Q++ S+SS KLFTWGDGDKNRLGHG+KE L P
Sbjct: 405 QSLNGLKTVKVACSIWHTAAIVEVM-GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLP 463
Query: 497 TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAG 556
TCV +LIDYNFHK+ACGH+ TV LTTSGHVFTMG T +GQLGN +DGKLPCLV+D+L G
Sbjct: 464 TCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVG 523
Query: 557 ESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIAC 616
E VEEIACGA+HVAVLTSR+EV+TWGKGANGRLGHGD ED++TP LVEAL+DRHVK ++C
Sbjct: 524 EFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSC 583
Query: 617 GSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALA 676
GSN++++IC+HKWVS A+Q CS CRQAFGFTRKRHNCYNCGLVHCH+CSS+KAL+AALA
Sbjct: 584 GSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALA 643
Query: 677 PNPGKPYRVCDCCFAKLNKVSEAS-----NRRNSLPRLSGENKDRLDKSDLKLSKSAMPS 731
P PGKP+RVCD C++KL K +E+ NR + P S + R D+ + SK + +
Sbjct: 644 PTPGKPHRVCDACYSKL-KAAESGYSSNVNRNVATPGRSIDGSVRTDRETTRSSKVLLSA 702
Query: 732 NVDLIKQLDCKAAKQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKPILA 788
N + + +++ G ++ S R+SQ PSL QLKD+ ++ + KP++A
Sbjct: 703 NKNSVMS----SSRPGFTPES-SNARASQVPSLQQLKDIAFPSSLSAIQNAFKPVVA 754
Score = 412 (150.1 bits), Expect = 3.3e-278, Sum P(4) = 3.3e-278
Identities = 95/217 (43%), Positives = 129/217 (59%)
Query: 1 MADLVS-YGNADRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGER 59
MAD S Y +RD++QAL+ LKKG QLLKY RKGKPKF FRLS DE +LIW S E+
Sbjct: 1 MADPASCYIYHERDVDQALVVLKKGTQLLKYSRKGKPKFRAFRLSPDEKTLIWFSRGEEK 60
Query: 60 SLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGL 119
LKL VS+I+PGQRT R+LRPEKD+LSFSL+YNN +RSLDLICKDK E EVW A L
Sbjct: 61 GLKLFEVSRIVPGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAAL 116
Query: 120 KALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLT-RDISSPEVSVSLNHPI 178
K LI + R++ + + + D + S S+ +I S+ L +
Sbjct: 117 KFLIEKSRNRRARSE--------IPEIHDSDTFSVGRQSIDFVPSNIPRGRTSIDLGYQN 168
Query: 179 SSPTSFQTEGSISVNSERSHVASDNT-NMQVKGSGSD 214
+S ++ + +++ ++ +T + GSG D
Sbjct: 169 NSDVGYERGNMLRPSTDGFRISVSSTPSCSSGGSGPD 205
Score = 191 (72.3 bits), Expect = 3.3e-278, Sum P(4) = 3.3e-278
Identities = 38/101 (37%), Positives = 61/101 (60%)
Query: 1007 KESMPLQDS--ENGTRPRSPALSVSSHQVEA-EWIEQYEPGVYITLVALRDGTRDLKRVR 1063
+E +P S E + R+P+ SS ++ E EQ+EPGVY+T +G + +RVR
Sbjct: 917 EEQVPSNSSITETSSSSRAPSTEASSSRISGKESKEQFEPGVYVTYEVDMNGNKIFRRVR 976
Query: 1064 FSRRRFGEHQAETWWSENREKVYERYNVRGLDKSSASGQAA 1104
FS++RF EHQAE WW++N++++ + Y+ SS+S A
Sbjct: 977 FSKKRFDEHQAEDWWTKNKDRLLKCYSSNSSSSSSSSNPTA 1017
Score = 149 (57.5 bits), Expect = 3.3e-278, Sum P(4) = 3.3e-278
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 821 FSKSITDSLKKTNELLNQEVLKLRAQVESLRQRCEFQELELQKSTXXXXXXXXXXXXXXX 880
FS+S+ DSL+KTNE++NQE+ KL +Q QRC Q E+++
Sbjct: 794 FSRSVIDSLRKTNEVMNQEMTKLHSQ-----QRCNNQGTEIERFQKAAKDASELAARQSS 848
Query: 881 XXXXXXDVIKSLTAQLKDMAERLPPGVYDPE 911
+ +KS+ QLK++ E+LPP V + E
Sbjct: 849 KHKAATEALKSVAEQLKELKEKLPPEVSESE 879
Score = 55 (24.4 bits), Expect = 5.0e-50, Sum P(3) = 5.0e-50
Identities = 25/102 (24%), Positives = 44/102 (43%)
Query: 692 KLNKVSEASNRRNSLPRLSGENKDRLD-----KSDLKLSKSAMPSNVDLIKQLDCKAAKQ 746
KL+ +N+ + R KD + S K + A+ S + +K+L K +
Sbjct: 815 KLHSQQRCNNQGTEIERFQKAAKDASELAARQSSKHKAATEALKSVAEQLKELKEKLPPE 874
Query: 747 GKKADAFSLVRSSQAPSLLQLKDVV----LTTAADLRRTTPK 784
+++AF + +SQA + L V LTT+ + T K
Sbjct: 875 VSESEAFESI-NSQAEAYLNANKVSETSPLTTSGQEQETYQK 915
Score = 44 (20.5 bits), Expect = 4.0e-267, Sum P(4) = 4.0e-267
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 823 KSITDSLKKTNELLNQEVLKLRAQVESLRQRCE 855
KS+ + LK+ E L EV + A ES+ + E
Sbjct: 858 KSVAEQLKELKEKLPPEVSESEA-FESINSQAE 889
Score = 40 (19.1 bits), Expect = 1.7e-48, Sum P(4) = 1.7e-48
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 702 RRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVD-LIKQLDCKAAKQGKKADAF 753
RR S PR SG ++ +D L+ + M + L Q C QG + + F
Sbjct: 784 RRPSPPRTSGFSRSVIDS--LRKTNEVMNQEMTKLHSQQRCN--NQGTEIERF 832
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 1812 (642.9 bits), Expect = 2.1e-276, Sum P(4) = 2.1e-276
Identities = 346/591 (58%), Positives = 432/591 (73%)
Query: 181 PTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPDDCDALG 240
P F S +++ SD+ + ++G G D FRV DD DALG
Sbjct: 208 PKGFYPSDSATISVHSG--GSDSMHGHMRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALG 265
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DV+IWGE I + V+ G + + + D LLP+ LES +VLDV +IACG +HA LVT+
Sbjct: 266 DVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTK 325
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
QGE F+WGEES GRLGHGV +I QP L+++L T+++ V CGEFH+CAVT++G+LYTWG
Sbjct: 326 QGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG 385
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG 420
G + G+LGHG +VSHW+PKR++ LEG+ V+S+ CGP+HTA++TS GQLFTFGDGTFG
Sbjct: 386 KG--DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFG 443
Query: 421 VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS-VSSGKLFTWGD 479
VLGHGD+K+V PREV+SL GLRT+ ACGVWHTAAVVEV+V SS+S SSGKLFTWGD
Sbjct: 444 VLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 503
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN 539
GDK RLGHG+KEP+L PTCV AL++ NF +VACGHSLTV LTTSGHV+TMGS VYGQLGN
Sbjct: 504 GDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN 563
Query: 540 PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT 599
+ADGK P VE KL VEEIACGAYHVAVLTSR EVYTWGKG+NGRLGHGDV+DR +
Sbjct: 564 SHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS 623
Query: 600 PALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGL 659
P LVE+LKD+ VK IACG+N++AA+C+H+W S +Q CS CRQ F F RKRHNCYNCGL
Sbjct: 624 PTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRKRHNCYNCGL 683
Query: 660 VHCHSCSSRKALRAALAPNPGKPYRVCDCCFAKLNKVSEAS-NRRNSLPRLSGENK--DR 716
V CHSC+S+K+L+A +APNP KPYRVCD CF KL K E + +SL R N+ D
Sbjct: 684 VFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSLSRRGSINQGSDP 743
Query: 717 LDKSDLKLSKS----AMPSNVDLIKQLDCKAAKQGKKADAFSLVRSSQAPS 763
+DK D S+S A S ++ ++Q+D + K+ KK + F+ R S PS
Sbjct: 744 IDKDDKFDSRSDGQLARFSLMESMRQVDSRH-KKNKKYE-FNSSRVSPIPS 792
Score = 450 (163.5 bits), Expect = 2.1e-276, Sum P(4) = 2.1e-276
Identities = 113/226 (50%), Positives = 140/226 (61%)
Query: 2 ADLVSYGNADRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGERSL 61
+DL G +RDIEQA+IALKKGA LLKYGR+GKPKF PFRLSNDET LIW S + E+ L
Sbjct: 9 SDLSRAGPVERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEKHL 68
Query: 62 KLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKA 121
KL+ VS+II GQRT +FQRY RPEK+Y SFSLIY+ +RSLD+ICKDK EAEVW GLKA
Sbjct: 69 KLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYS--ERSLDVICKDKDEAEVWFTGLKA 126
Query: 122 LISS-GQGGR---SKIDGW----NDGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVS 173
LIS Q R S+ DG N Y S L S +S+ S L +D S+ +
Sbjct: 127 LISHCHQRNRRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDS--LQKDGSN---HLR 181
Query: 174 LNHPISSPTSFQTEGSISVNS-----ERSHVASDNTNMQVKGSGSD 214
++ P SP + + S + + SD+ + V GSD
Sbjct: 182 IHSPFESPPKNGLDKAFSDMALYAVPPKGFYPSDSATISVHSGGSD 227
Score = 252 (93.8 bits), Expect = 2.1e-276, Sum P(4) = 2.1e-276
Identities = 55/109 (50%), Positives = 71/109 (65%)
Query: 994 LANSSCVSESSEGKESMPLQDSENGTRPRSPAL----SVSSHQVEAEWIEQYEPGVYITL 1049
+ N + ES + P+ NGT +PA + + + E EW+EQ EPGVYITL
Sbjct: 966 ILNQANSQESEPNGITTPM--FSNGTM--TPAFGNGEATNEARNEKEWVEQDEPGVYITL 1021
Query: 1050 VALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVRGLDKSS 1098
AL G RDLKRVRFSR+RF E QAE WW++NR +VYE+YNVR +DK+S
Sbjct: 1022 TALAGGARDLKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNVRMVDKAS 1070
Score = 198 (74.8 bits), Expect = 2.1e-276, Sum P(4) = 2.1e-276
Identities = 42/89 (47%), Positives = 57/89 (64%)
Query: 818 GLSFSKSITDSLKKTNELLNQEVLKLRAQVESLRQRCEFQELELQKSTXXXXXXXXXXXX 877
GL+ K + D K+TN+ L+QEV+KLR+QVESL ++ + QE+EL+++T
Sbjct: 852 GLATPKFVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAITNE 911
Query: 878 XXXXXXXXXDVIKSLTAQLKDMAERLPPG 906
+VIKSLTAQLKDMAERLP G
Sbjct: 912 ETTRCKAAKEVIKSLTAQLKDMAERLPVG 940
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 1495 (531.3 bits), Expect = 7.1e-178, Sum P(3) = 7.1e-178
Identities = 331/722 (45%), Positives = 439/722 (60%)
Query: 11 DRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGERSLKLASVSKII 70
DR EQA++ALKKGAQLLK R+G PKF PF+LS DE LIW S ER L+L+SV I+
Sbjct: 13 DRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEERQLRLSSVITIV 72
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGR 130
GQ T FQ+ + ++ SFSLIY NG+ +LDLICKDK +A+ W GL+A+I+ R
Sbjct: 73 RGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHNIR 132
Query: 131 SKIDGWNDGGLY--LEDSRDLTSNSASDSSVSLTRDIS-------SPEVSVS---LNHPI 178
+ ++ + G + + + T D++ SP + L++ +
Sbjct: 133 NSVNHRSSRGAQSCINSPAGFMRRKQNLGLLEETPDVTQIRSLCGSPSTLLEERCLSNGL 192
Query: 179 S-SPTSFQTEGSISVNSERSHVASDNTNMQV-KGSGSDVFRVXXXXXXXX--XXXXXAP- 233
S S SF ++ S D N + +GS++ R P
Sbjct: 193 SCSSDSFAESDALGPVSSYYETDYDFRNSDCDRSTGSELCRFSSQRFAASPPLSIITQPV 252
Query: 234 DDCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVR 293
+ L D+ IWG + ++ KN N D L P+ LES + DV I+ G +
Sbjct: 253 TRSNVLKDIMIWGAIT--GLIDGS--KNQN------DALSPKLLESATMFDVQSISLGAK 302
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMA 353
HAALVTRQGEVF WG + G+LG V DI P +ESL +V V C + TCAVT +
Sbjct: 303 HAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTES 362
Query: 354 GELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQL 411
GELY WG DG G + S ++ ++IS L G L V SV CG WHTA++TS+GQL
Sbjct: 363 GELYLWGIDG----GTIEQSG--SQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQL 416
Query: 412 FTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS 471
FT+G GTFGVLGHG ++V+ P+EVESL ++ I+V+CG WHTAA+VE + + S
Sbjct: 417 FTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKS 476
Query: 472 -GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMG 530
GKLFTWGDGDK RLGH D + +L PTCV LID++F KV+CG +LTV L+ SG V+TMG
Sbjct: 477 CGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMG 536
Query: 531 STVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
S+++GQLG P A K +V L + V++IA G++HVAVLTS VYTWGKG NG+LG
Sbjct: 537 SSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLG 596
Query: 591 HGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRK 650
GDV DR +P LVE L DR V+ IACG N +AAICLHK +S +Q CS+C+ AFGFTR+
Sbjct: 597 LGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTRR 656
Query: 651 RHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDCCFAKLNKVSEASNR---RNSLP 707
+HNCYNCGL+ C++CSS+KA+ A+LAPN K RVCD CF L ++E S N P
Sbjct: 657 KHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFSRNVKMDNHTP 716
Query: 708 RL 709
R+
Sbjct: 717 RM 718
Score = 197 (74.4 bits), Expect = 7.1e-178, Sum P(3) = 7.1e-178
Identities = 40/92 (43%), Positives = 55/92 (59%)
Query: 999 CVSESSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRD 1058
CV++SS ++ L + R+ L + AE +EQYEPGVYIT AL G +
Sbjct: 912 CVTKSSNRDSNIKLLVDASPAITRTGYLQNETQDSSAEQVEQYEPGVYITFTALPCGQKT 971
Query: 1059 LKRVRFSRRRFGEHQAETWWSENREKVYERYN 1090
LKRVRFSR+RF E +A+ WW E + VY +Y+
Sbjct: 972 LKRVRFSRKRFSEKEAQRWWEEKQVLVYNKYD 1003
Score = 73 (30.8 bits), Expect = 7.1e-178, Sum P(3) = 7.1e-178
Identities = 20/101 (19%), Positives = 50/101 (49%)
Query: 822 SKSITDSLKKTNELLNQEVLKLRAQVESLRQRCEFQELELQKSTXXXXXXXXXXXXXXXX 881
S I+ S ++N++L +E+ +L+A +++L+++CE ++++
Sbjct: 785 STKISTS-SESNKILTEEIERLKAVIKNLQRQCELGNEKMEECQQELDKTWEVAKEEAEK 843
Query: 882 XXXXXDVIKSLTAQLKDMAER----LPPGVY-DPENMRPAY 917
++IK+L ++L+ E+ L G+ +P + P +
Sbjct: 844 SKAAKEIIKALASKLQANKEKPSNPLKTGIACNPSQVSPIF 884
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 1664 (590.8 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 341/706 (48%), Positives = 448/706 (63%)
Query: 11 DRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGERSLKLASVSKII 70
DR+ EQA+ LKKGA LLKYGR+GKPKFYPFRLS+DE L+W E+ LKL+SV++II
Sbjct: 14 DRENEQAIAILKKGAYLLKYGRRGKPKFYPFRLSSDEIYLLWYCGKKEKRLKLSSVTRII 73
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWI--AGLKALISSGQG 128
PGQRTAVF+RY +P K+Y SFSLIY G+RSLDL KD+ E + A L SS
Sbjct: 74 PGQRTAVFRRYPQPTKEYQSFSLIY--GERSLDLD-KDEAEFWLTTLRALLSRNNSSALV 130
Query: 129 GRSKIDGWN-DGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHP-----ISSPT 182
S+ + G S++ SN S SS + + + N P + S
Sbjct: 131 LHSRSRSLAPENGEQSSSSQNSKSNIRSVSSDTSYEEHAKKASGSHCNTPQRLGKVFSEV 190
Query: 183 SFQTE--GSISVNS--ERSHVASDNT--NMQVKGS--GSDVFRVXXXXXXXXXXXXXAPD 234
QT ++S++ + H + T N S G D + +
Sbjct: 191 LSQTAVLKALSLDELVHKPHTSPPETIENRPTNHSSPGVDTSKYSISSAVSSSSQGSTFE 250
Query: 235 DCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRH 294
D +L DV++WGE I D ++ G K+ + D LP+ L+S+V LD I+CG +
Sbjct: 251 DLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNY 310
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAG 354
A LVT+QG++++WGEESGGRLGHGV + P L++ ++V+ CGEFHTCAVT +G
Sbjct: 311 AVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASG 370
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
+LY WGDG HNAGLLG G+ SHW P RI G +EG+ V +++CGPWHTA +TS G+LFTF
Sbjct: 371 DLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTF 430
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
GDGTFG LGHGDR + + PREVE+L+G RTI ACGVWH+AAVV V + SSGKL
Sbjct: 431 GDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVF----GEATSSGKL 486
Query: 475 FTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVY 534
FTWGDGD RLGHGD E RL P+CV L +F +VACG S+TV L+ SG V+ MG+
Sbjct: 487 FTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTA-- 544
Query: 535 GQLGNPNAD-GKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGD 593
+P+ D + P +E L V+E+ACG +H+AVL S+ EVYTWGKG+NG+LGHGD
Sbjct: 545 ----DPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGD 600
Query: 594 VEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHN 653
E R P LV+ALK + V+ + CGSNY+A ICLHK ++ + +CS CR F + RK HN
Sbjct: 601 TEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRHPFNYMRKLHN 660
Query: 654 CYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDCCFAKLNKVSEA 699
CYNCG V C+SC+S+K+L AA+AP +PYRVCD C+ KL + E+
Sbjct: 661 CYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRES 706
Score = 84 (34.6 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 830 KKTNELLNQEVLKLRAQVESLRQRCEFQELELQKSTXXXXXXXXXXXXXXXXXXXXXDVI 889
KK+N+ L+ E+ L+AQVE L + + E EL K++ +++
Sbjct: 870 KKSNQCLSHEISVLKAQVEELTLKSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIV 929
Query: 890 KSLTAQLKDMAER 902
+SLT QL + ++
Sbjct: 930 RSLTLQLMNTTKK 942
Score = 44 (20.5 bits), Expect = 1.6e-173, Sum P(2) = 1.6e-173
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 822 SKSITDSLKKTNELLNQEVLKLRAQVESLRQRCEF-QELELQ 862
SK + L KT++ L VL R E ++ E + L LQ
Sbjct: 894 SKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQ 935
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 496 (179.7 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 133/396 (33%), Positives = 194/396 (48%)
Query: 246 GEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIA---CGVRHAALVTRQG 302
G+++C G D + + G D P P + + LD H I CG H ++ G
Sbjct: 33 GDIVCS--WGRGEDGQLGH-GDAED--RPSPTQLSA-LDGHQIVSVTCGADHTVAYSQSG 86
Query: 303 -EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGD 361
EV++WG GRLGHG D+ P +++L + + CG+ H AVTM GE+ +WG
Sbjct: 87 MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR 146
Query: 362 GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV 421
+ G LG G +P++I EG+++ V G HTA +T G L+ +G G +G
Sbjct: 147 NQN--GQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 422 LGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
LG GDR + P V S G + VACG HT +V SG L+T+G
Sbjct: 204 LGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSY-----------SGALYTYGWSK 252
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NP 540
+LGHGD E L P + AL + +++ G T+ LT+ G ++ G +GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 541 NADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP 600
N D P V + V +++CG H +T RN V+ WG+G NG+LG G+ DR P
Sbjct: 313 NLDQCSPVQVRFP-DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Query: 601 ALVEALK-DRHVKYIACGSNYSAAICLHKWVSSAEQ 635
++EAL D SN + WVS AE+
Sbjct: 372 KIIEALSVDGASGQHIESSNIDPSSG-KSWVSPAER 406
Score = 449 (163.1 bits), Expect = 2.5e-41, P = 2.5e-41
Identities = 111/339 (32%), Positives = 172/339 (50%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
I+ G H+ + V +WG G+LGHG +D P L +L + VTCG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 348 CAVTMAG-ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
A + +G E+Y+WG G + G LGHG + P I L G+++ + CG H +T
Sbjct: 80 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136
Query: 407 STGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G++ ++G G LG GD ++ P+++++ G+R VA G HTAAV E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
G L+ WG G LG GD+ RL P V + VACG T+ ++ SG +
Sbjct: 190 ----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGAL 245
Query: 527 FTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
+T G + YGQLG+ + + L P +E L+ + +I+ G H LTS ++Y WG
Sbjct: 246 YTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G++G G+ D+ +P V D+ V ++CG ++ A+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Score = 308 (113.5 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 77/246 (31%), Positives = 118/246 (47%)
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
+V ++ G H+ + S + ++G G G LGHGD ++ P ++ +L G + ++V CG
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
HT A +QS V ++WG GD RLGHG+ P + AL ++
Sbjct: 76 ADHTVAY-----SQSGMEV-----YSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 125
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAYHV 569
ACG S + +T G V + G GQLG D +P ++ G ++ +A GA H
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHT 184
Query: 570 AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACG------SNYSAA 623
A +T ++Y WG G G LG GD DR P V + + +ACG +YS A
Sbjct: 185 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 624 ICLHKW 629
+ + W
Sbjct: 245 LYTYGW 250
Score = 295 (108.9 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 81/267 (30%), Positives = 125/267 (46%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNY-LGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
A GD + + V G ++N LG D L+P+ +++ + + +A G H A
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 185
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
VT G+++ WG G LG G D + P + S + V CG HT +V+ +G L
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGAL 245
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW-HTALITSTGQLFTFG 415
YT+G + G LGHG H IP ++ L ++ ++ G W HT +TS G+L+ +G
Sbjct: 246 YTYGWSKY--GQLGHGDLEDHLIPHKLEA-LSNSFISQIS-GGWRHTMALTSDGKLYGWG 301
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
FG +G G+ + P +V + + V+CG HT AV E +F
Sbjct: 302 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE-----------RNNVF 350
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPAL 502
WG G +LG G+ R P + AL
Sbjct: 351 AWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 271 (100.5 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 68/201 (33%), Positives = 108/201 (53%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
GD+Y WG G N+ LG R D L+P + S + +ACG RH V+
Sbjct: 191 GDLYGWGW---------GRYGNLG-LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVS 240
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G ++T+G G+LGHG +D + PH LE+L+ + + ++ G HT A+T G+LY W
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW 300
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G + G +G G ++ P ++ P + +V V+CG HT +T +F +G GT
Sbjct: 301 G--WNKFGQVGVGNNLDQCSPVQVRFP-DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Query: 420 GVLGHGDRKNVSYPREVESLS 440
G LG G+ + ++P+ +E+LS
Sbjct: 358 GQLGIGESVDRNFPKIIEALS 378
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 514 (186.0 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 132/391 (33%), Positives = 196/391 (50%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
D ++ G+ CD V GA ++ +V++P S + CG ++
Sbjct: 3247 DWHLGGK--CD-VYLWGAGRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 3301
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVT-CG-EFHTCAVTMAGELY 357
G V GE S GRLG G D+ ++ +L VT CG + H+ A+T +GE++
Sbjct: 3302 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3361
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LGHG P++I L+G +V ++CG H+A++TS G+LFTFG+G
Sbjct: 3362 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3418
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+G LG G+ N P V +L G + VACG+ HT AV S ++ +
Sbjct: 3419 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 3468
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVY--- 534
GDGD +LG G+ + P V L KVACG +V LT GHV+T G
Sbjct: 3469 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 3528
Query: 535 --GQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
G+ N N ++P L AG +E++A GA H L S +VY WG + G+LG G
Sbjct: 3529 PEGRARNHNRPQQIPVL-----AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 3583
Query: 593 DVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ P LV L+ ++++ I+ G +SAA
Sbjct: 3584 HTNHVREPTLVTVLQGKNIRQISAGRCHSAA 3614
Score = 389 (142.0 bits), Expect = 9.9e-28, Sum P(3) = 9.9e-28
Identities = 103/341 (30%), Positives = 171/341 (50%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDG 362
+V+ WG G+L G++++ P S + V CG+ T + G + G+G
Sbjct: 3255 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQAQQ--VICGQNCTFVIQANGTVLACGEG 3311
Query: 363 THNAGLLGHG-TDVSHWIPKRISGPLEGLQVASV--TCGP-WHTALITSTGQLFTFGDGT 418
++ G LG G +D H + + L+G V + +CG H+ +T +G++F++GDG
Sbjct: 3312 SY--GRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 3367
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGHG+ PR++E+L G + ++CG H+A +VT S GKLFT+G
Sbjct: 3368 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSA-----VVT------SDGKLFTFG 3416
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH-VFTMGSTVYGQL 537
+GD RLG G+ + P V AL Y +VACG + T+ ++ G V+ G YG+L
Sbjct: 3417 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 3476
Query: 538 GNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
G N+ K D L G ++++ACG LT VYT+G+ L G +
Sbjct: 3477 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3536
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE 634
P + L ++ +A G+ ++ A+ ++ W S++E
Sbjct: 3537 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 3577
Score = 363 (132.8 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 94/289 (32%), Positives = 149/289 (51%)
Query: 289 ACGVR-HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
+CG H+ +T GEVF+WG+ G+LGHG +P +E+L V ++CG H+
Sbjct: 3344 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3403
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
VT G+L+T+G+G + G LG G + +P+R++ LEG Q+ V CG HT +++
Sbjct: 3404 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 3460
Query: 408 TGQL-FTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G + + FGDG +G LG G+ S P++V+ L G+ VACG + A+ +
Sbjct: 3461 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK------- 3513
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
G ++T+G L G +P +P L VA G T+ L ++G V
Sbjct: 3514 ----DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDV 3569
Query: 527 FTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
+ GS GQLG + + + P LV L G+++ +I+ G H A T+
Sbjct: 3570 YAWGSNSEGQLGLGHTNHVREPTLVT-VLQGKNIRQISAGRCHSAAWTA 3617
Score = 252 (93.8 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 82/253 (32%), Positives = 127/253 (50%)
Query: 381 KRISGPLEGLQVAS-VTCGP--WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVE 437
K I+G E Q+ S T P WH + ++ +G G G L R NV P
Sbjct: 3228 KWINGMDE--QIMSWATSRPEDWH---LGGKCDVYLWGAGRHGQLAEAGR-NVMVPAAAP 3281
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
S S + V CG + V++ ++G + G+G RLG G+ + T
Sbjct: 3282 SFSQAQQ--VICGQ-NCTFVIQ----------ANGTVLACGEGSYGRLGQGNSDDLHVLT 3328
Query: 498 CVPALIDYNFHKV--ACG---HSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVE 551
+ AL + ++ +CG HS+ LT SG VF+ G YG+LG+ N+D + P +E
Sbjct: 3329 VISALQGFVVTQLVTSCGSDGHSMA--LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 3386
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
L GE V +++CG H AV+TS +++T+G G GRLG G+ ++K P V AL+ +
Sbjct: 3387 -ALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 3445
Query: 612 KYIACGSNYSAAI 624
+ACG N++ A+
Sbjct: 3446 GQVACGLNHTLAV 3458
Score = 46 (21.3 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 20/86 (23%), Positives = 42/86 (48%)
Query: 131 SKIDGWNDGGLYLEDSRDLTSNSAS--DSSVSLTRDISSP---EVSVS-LNHPISSPTSF 184
S+++ +D L+ SRD NS+ +S LT+ + E VS ++ + + F
Sbjct: 857 SQLESLSDSWARLKHSRDWLCNSSYSFESDFDLTKSLGVHTLIENVVSFVSGDVGNAPGF 916
Query: 185 -QTEGSISVNSERSHVASDNTNMQVK 209
+ E S+S + + S +A + ++ +
Sbjct: 917 KEPEESMSTSPQASIIAMEQQQLRAE 942
Score = 46 (21.3 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 333 TMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP 380
T+T F T G+F TC + M ++G L D + P
Sbjct: 1432 TLTLSSF-TQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYP 1478
Score = 41 (19.5 bits), Expect = 2.8e-41, Sum P(3) = 2.8e-41
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 96 NNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSAS 155
N GK +D I V A W A SG+ + G DG L L + D+++
Sbjct: 2772 NGGKGLVD-IQPHWVSALAWPEEGPATAWSGESPELLLVGRMDGSLGLIEVVDVSTMHRR 2830
Query: 156 DSSVSLTRDIS 166
+ +D+S
Sbjct: 2831 ELEHCYRKDVS 2841
Score = 41 (19.5 bits), Expect = 2.8e-41, Sum P(3) = 2.8e-41
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 99 KRSLDLICKDKVEAEVWIAGLKALISSGQGGRSK--IDGWNDGGLYLEDSRDLTSNSASD 156
KR+L L ++ +A ++ + L+ GG+ K ID + + ++ + S S
Sbjct: 1845 KRALGLADLERAQAMIYKLVVHGLLEDQFGGKIKQEIDQQAEENDQAQQAQTPVTTSPSA 1904
Query: 157 SSVSLTRDISSPEVSVSLNHPIS 179
SS + SS E + + P++
Sbjct: 1905 SSTTSFMS-SSLEDTTTATTPVT 1926
Score = 41 (19.5 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 330 ESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
E+L + V F E C + G++ T G G GL G
Sbjct: 1333 ENLPIQEVSFDP--EKAQCCLVENGQILTHGSGGKGYGLASTG 1373
Score = 40 (19.1 bits), Expect = 3.6e-41, Sum P(3) = 3.6e-41
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 118 GLKALISSGQGGRSKIDGWNDGGL 141
GL AL+S G GG I DG +
Sbjct: 3016 GL-ALVSGGLGGLMNIWSLRDGSV 3038
Score = 39 (18.8 bits), Expect = 2.8e-41, Sum P(3) = 2.8e-41
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 13 DIEQALIALKKGAQLLKYGRKGK 35
D E+A L + Q+L +G GK
Sbjct: 1343 DPEKAQCCLVENGQILTHGSGGK 1365
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 515 (186.3 bits), Expect = 2.9e-43, Sum P(2) = 2.9e-43
Identities = 132/391 (33%), Positives = 196/391 (50%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
D ++ G+ CD V GA ++ +V++P S + CG ++
Sbjct: 3990 DWHLGGK--CD-VYLWGAGRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVT-CG-EFHTCAVTMAGELY 357
G V GE S GRLG G D+ ++ +L VT CG + H+ A+T +GE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LGHG P++I L+G +V ++CG H+A++TS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+G LG G+ N P V +L G + VACG+ HT AV S ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVY--- 534
GDGD +LG G+ + P + L KVACG +V LT GHV+T G
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4271
Query: 535 --GQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
G+ N N ++P L AG +E++A GA H L S +VY WG + G+LG G
Sbjct: 4272 PEGRARNHNRPQQIPVL-----AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Query: 593 DVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ P LV L+ ++V+ I+ G +SAA
Sbjct: 4327 HTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 450 (163.5 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 128/399 (32%), Positives = 190/399 (47%)
Query: 232 APDDCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACG 291
+PD GD I E C+ V + GT+ +L P+ S D I G
Sbjct: 356 SPDSIQT-GDAPIVSET-CEVYVWGSNSSHQLVEGTQEKILQPKLAPS--FSDAQTIEAG 411
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT---SVDFVTCG---EF 345
+++ G V G+ S GRLG G D L+ LT S+ V+ +
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLG---DSNNQSTLKKLTFEPHRSIKKVSSSKGSDG 468
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
HT A T GE+++WGDG + G LGHG + PK I GPL+G V V+ G H+A +
Sbjct: 469 HTLAFTTEGEVFSWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G+L+T+G+G FG LGHGD + + P V+ +S + V+CG HT A+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--VSCGSSHTIAL-------- 576
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
S ++++G GD +LGHGD KP + AL KV G ++ LT++G
Sbjct: 577 --SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQ 634
Query: 526 VFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
V+ G G+ A P L+E+ LA + +++ G H L+ NEVY WG +
Sbjct: 635 VYAWGCGACLGCGSSEATALRPKLIEE-LAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693
Query: 586 NGRLGHGDVEDRKT-PALVEALKDRHVKYIACGSNYSAA 623
G+ G G+ T P V L ++ I+ G+++S A
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 388 (141.6 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 103/341 (30%), Positives = 171/341 (50%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDG 362
+V+ WG G+L G++++ P S + V CG+ T + G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQAQQ--VICGQNCTFVIQANGTVLACGEG 4054
Query: 363 THNAGLLGHG-TDVSHWIPKRISGPLEGLQVASV--TCGP-WHTALITSTGQLFTFGDGT 418
++ G LG G +D H + + L+G V + +CG H+ +T +G++F++GDG
Sbjct: 4055 SY--GRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4110
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGHG+ PR++E+L G + ++CG H+A +VT S GKLFT+G
Sbjct: 4111 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSA-----VVT------SDGKLFTFG 4159
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH-VFTMGSTVYGQL 537
+GD RLG G+ + P V AL Y +VACG + T+ ++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 538 GNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
G N+ K D L G ++++ACG LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE 634
P + L ++ +A G+ ++ A+ ++ W S++E
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSE 4320
Score = 364 (133.2 bits), Expect = 8.1e-25, Sum P(3) = 8.1e-25
Identities = 94/289 (32%), Positives = 149/289 (51%)
Query: 289 ACGVR-HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
+CG H+ +T GEVF+WG+ G+LGHG +P +E+L V ++CG H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
VT G+L+T+G+G + G LG G + +P+R++ LEG Q+ V CG HT +++
Sbjct: 4147 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4203
Query: 408 TGQL-FTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G + + FGDG +G LG G+ S P++++ L G+ VACG + A+ +
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTK------- 4256
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
G ++T+G L G +P +P L VA G T+ L ++G V
Sbjct: 4257 ----DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDV 4312
Query: 527 FTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
+ GS GQLG + + + P LV L G++V +I+ G H A T+
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLVTG-LQGKNVRQISAGRCHSAAWTA 4360
Score = 290 (107.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 83/300 (27%), Positives = 148/300 (49%)
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL 390
S T S D + G+ + T E+Y WG + + L GT PK ++
Sbjct: 351 SRTCASPDSIQTGDAPIVSETC--EVYVWGSNSSHQ--LVEGTQEKILQPK-LAPSFSDA 405
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV--ESLSGLRTIAVA 448
Q ++ G + T +I++ G + G G++G LG GD N S +++ E ++ ++ +
Sbjct: 406 Q--TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 449 CGV-WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
G HT A + G++F+WGDGD +LGHG+ + P + +
Sbjct: 464 KGSDGHTLAFT-----------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 508 HK-VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACG 565
V+ G+ + +T G ++T G +G+LG+ +++ + +P LV+D +V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCG 569
Query: 566 AYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ H L+ V+++G G NG+LGHGD P ++EAL+ ++ + GS S A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 252 (93.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 82/253 (32%), Positives = 127/253 (50%)
Query: 381 KRISGPLEGLQVAS-VTCGP--WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVE 437
K I+G E Q+ S T P WH + ++ +G G G L R NV P
Sbjct: 3971 KWINGMDE--QIMSWATSRPEDWH---LGGKCDVYLWGAGRHGQLAEAGR-NVMVPAAAP 4024
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
S S + V CG + V++ ++G + G+G RLG G+ + T
Sbjct: 4025 SFSQAQQ--VICGQ-NCTFVIQ----------ANGTVLACGEGSYGRLGQGNSDDLHVLT 4071
Query: 498 CVPALIDYNFHKV--ACG---HSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVE 551
+ AL + ++ +CG HS+ LT SG VF+ G YG+LG+ N+D + P +E
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMA--LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4129
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
L GE V +++CG H AV+TS +++T+G G GRLG G+ ++K P V AL+ +
Sbjct: 4130 -ALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 612 KYIACGSNYSAAI 624
+ACG N++ A+
Sbjct: 4189 GQVACGLNHTLAV 4201
Score = 155 (59.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 41/153 (26%), Positives = 74/153 (48%)
Query: 257 GADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
G D G V P+ +E+ + + + G + + +T G+V+ WG G LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLG 645
Query: 317 HGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV 375
G + ++P L+E L T + V+ G+ H A++ E+Y WG+ ++ G G G
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGN--NSMGQCGQGNST 703
Query: 376 SHWI-PKRISGPLEGLQVASVTCGPWHTALITS 407
PK++SG L+G+ + ++ G H+ T+
Sbjct: 704 GPITKPKKVSG-LDGIAIQQISAGTSHSLAWTA 735
Score = 113 (44.8 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 52/238 (21%), Positives = 86/238 (36%)
Query: 120 KALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSV----SLTRDISSP-EVSVSL 174
K ++ G R DG LY D DS+ +L +DIS+ EVS
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 175 NHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPD 234
+H I+ +T S + + +TN K + +
Sbjct: 571 SHTIALSKDGRTVWSFG-GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA- 628
Query: 235 DCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRH 294
+ G VY WG C + G+ + A L P+ +E + ++ G H
Sbjct: 629 -LTSTGQVYAWG---CGACLGCGSSE--------ATALRPKLIEELAATRIVDVSIGDSH 676
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKD-IVQPHLLESLTMTSVDFVTCGEFHTCAVT 351
++ EV+ WG S G+ G G I +P + L ++ ++ G H+ A T
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 46 (21.3 bits), Expect = 2.9e-43, Sum P(2) = 2.9e-43
Identities = 20/86 (23%), Positives = 42/86 (48%)
Query: 131 SKIDGWNDGGLYLEDSRDLTSNSAS--DSSVSLTRDISSP---EVSVS-LNHPISSPTSF 184
S+++ +D L+ SRD NS+ +S LT+ + E VS ++ + + F
Sbjct: 1550 SQLESLSDSWARLKHSRDWLCNSSYSFESDFDLTKSLGVHTLIENVVSFVSGDVGNAPGF 1609
Query: 185 -QTEGSISVNSERSHVASDNTNMQVK 209
+ E S+S + + S +A + ++ +
Sbjct: 1610 KEPEESMSTSPQASIIAMEQQQLRAE 1635
Score = 41 (19.5 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 96 NNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSAS 155
N GK +D I V A W A SG+ + G DG L L + D+++
Sbjct: 3515 NGGKGLVD-IQPHWVSALAWPEEGPATAWSGESPELLLVGRMDGSLGLIEVVDVSTMHRR 3573
Query: 156 DSSVSLTRDIS 166
+ +D+S
Sbjct: 3574 ELEHCYRKDVS 3584
Score = 40 (19.1 bits), Expect = 4.9e-41, Sum P(3) = 4.9e-41
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 118 GLKALISSGQGGRSKIDGWNDGGL 141
GL AL+S G GG I DG +
Sbjct: 3759 GL-ALVSGGLGGLMNIWSLRDGSV 3781
Score = 39 (18.8 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 13 DIEQALIALKKGAQLLKYGRKGK 35
D E+A L + Q+L +G GK
Sbjct: 2036 DPEKAQCCLVENGQILTHGSGGK 2058
Score = 39 (18.8 bits), Expect = 6.3e-41, Sum P(3) = 6.3e-41
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 99 KRSLDLICKDKVEAEVWIAGLKALISSGQGGRSK--IDGWNDGGLYLEDSRDLTSNSASD 156
KR+L L ++ +A ++ + L+ GG+ K ID + + ++ + S S
Sbjct: 2581 KRALGLADLERAQAMIYKLVVHGLLEDQFGGKIKQEIDQQAEESDPAQQAQTPVTTSPSA 2640
Query: 157 SSVSLTRDISSPEVSVSLNHPIS 179
SS + SS E + + P++
Sbjct: 2641 SSTTSFMS-SSLEDTTTATTPVT 2662
Score = 38 (18.4 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 678 NPGKPYRVCD 687
NPG+ ++CD
Sbjct: 2179 NPGEKVKICD 2188
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 514 (186.0 bits), Expect = 3.7e-43, Sum P(2) = 3.7e-43
Identities = 132/391 (33%), Positives = 196/391 (50%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
D ++ G+ CD V GA ++ +V++P S + CG ++
Sbjct: 3991 DWHLGGK--CD-VYLWGAGRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4045
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVT-CG-EFHTCAVTMAGELY 357
G V GE S GRLG G D+ ++ +L VT CG + H+ A+T +GE++
Sbjct: 4046 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4105
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LGHG P++I L+G +V ++CG H+A++TS G+LFTFG+G
Sbjct: 4106 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4162
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+G LG G+ N P V +L G + VACG+ HT AV S ++ +
Sbjct: 4163 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4212
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVY--- 534
GDGD +LG G+ + P V L KVACG +V LT GHV+T G
Sbjct: 4213 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4272
Query: 535 --GQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
G+ N N ++P L AG +E++A GA H L S +VY WG + G+LG G
Sbjct: 4273 PEGRARNHNRPQQIPVL-----AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4327
Query: 593 DVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ P LV L+ ++++ I+ G +SAA
Sbjct: 4328 HTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4358
Score = 441 (160.3 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 130/400 (32%), Positives = 190/400 (47%)
Query: 232 APDDCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACG 291
+PD GD I E C+ V + GT+ +L P+ S D I G
Sbjct: 356 SPDSIQT-GDAPIVSET-CEVYVWGSNSSHQLVEGTQEKILQPKMALS--FSDAQTIEAG 411
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT---SVDFVTCG---EF 345
+++ G V G+ S GRLG G D L+ LT S+ V+ +
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLG---DSNNQSTLKKLTFEPHRSIKKVSSSKGSDG 468
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
HT A T GE+++WGDG + G LGHG + PK I GPL+G V V+ G H+A +
Sbjct: 469 HTLAFTTEGEVFSWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G+L+T+G+G FG LGHGD + + P V+ +S + V+CG HT A+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--VSCGSSHTIAL-------- 576
Query: 466 SASVSSGKLFTWGDGDK-NRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
S ++++G GD +LGHGD KP V AL KV G ++ LT++G
Sbjct: 577 --SKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTG 634
Query: 525 HVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
V+ G G+ A P L+E+ LA + +I+ G HV + NEVY WG
Sbjct: 635 QVYAWGCGACLGCGSSEATALRPKLIEE-LAATRIVDISIGDSHVWLFVMDNEVYAWGNN 693
Query: 585 ANGRLGHGDVEDRKT-PALVEALKDRHVKYIACGSNYSAA 623
+ G+ G G+ T P V L ++ I+ G+++S A
Sbjct: 694 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 733
Score = 389 (142.0 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 103/341 (30%), Positives = 171/341 (50%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDG 362
+V+ WG G+L G++++ P S + V CG+ T + G + G+G
Sbjct: 3999 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQAQQ--VICGQNCTFVIQANGTVLACGEG 4055
Query: 363 THNAGLLGHG-TDVSHWIPKRISGPLEGLQVASV--TCGP-WHTALITSTGQLFTFGDGT 418
++ G LG G +D H + + L+G V + +CG H+ +T +G++F++GDG
Sbjct: 4056 SY--GRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4111
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGHG+ PR++E+L G + ++CG H+A +VT S GKLFT+G
Sbjct: 4112 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSA-----VVT------SDGKLFTFG 4160
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH-VFTMGSTVYGQL 537
+GD RLG G+ + P V AL Y +VACG + T+ ++ G V+ G YG+L
Sbjct: 4161 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4220
Query: 538 GNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
G N+ K D L G ++++ACG LT VYT+G+ L G +
Sbjct: 4221 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4280
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE 634
P + L ++ +A G+ ++ A+ ++ W S++E
Sbjct: 4281 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 4321
Score = 363 (132.8 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 94/289 (32%), Positives = 149/289 (51%)
Query: 289 ACGVR-HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
+CG H+ +T GEVF+WG+ G+LGHG +P +E+L V ++CG H+
Sbjct: 4088 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4147
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
VT G+L+T+G+G + G LG G + +P+R++ LEG Q+ V CG HT +++
Sbjct: 4148 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4204
Query: 408 TGQL-FTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G + + FGDG +G LG G+ S P++V+ L G+ VACG + A+ +
Sbjct: 4205 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK------- 4257
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
G ++T+G L G +P +P L VA G T+ L ++G V
Sbjct: 4258 ----DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDV 4313
Query: 527 FTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
+ GS GQLG + + + P LV L G+++ +I+ G H A T+
Sbjct: 4314 YAWGSNSEGQLGLGHTNHVREPTLVT-VLQGKNIRQISAGRCHSAAWTA 4361
Score = 282 (104.3 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 84/301 (27%), Positives = 146/301 (48%)
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL 390
S T S D + G+ + T E+Y WG + + L GT PK L
Sbjct: 351 SRTCASPDSIQTGDAPIVSETC--EVYVWGSNSSHQ--LVEGTQEKILQPKMA---LSFS 403
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV--ESLSGLRTIAVA 448
++ G + T +I++ G + G G++G LG GD N S +++ E ++ ++ +
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 449 CGV-WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
G HT A + G++F+WGDGD +LGHG+ + P + +
Sbjct: 464 KGSDGHTLAFT-----------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 508 HK-VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACG 565
V+ G+ + +T G ++T G +G+LG+ +++ + +P LV+D +V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCG 569
Query: 566 AYHVAVLTSRNE-VYTWGKGAN-GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ H L+ V+++G G N G+LGHGD P +VEAL+ ++ + GS S A
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 629
Query: 624 I 624
+
Sbjct: 630 L 630
Score = 252 (93.8 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 82/253 (32%), Positives = 127/253 (50%)
Query: 381 KRISGPLEGLQVAS-VTCGP--WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVE 437
K I+G E Q+ S T P WH + ++ +G G G L R NV P
Sbjct: 3972 KWINGMDE--QIMSWATSRPEDWH---LGGKCDVYLWGAGRHGQLAEAGR-NVMVPAAAP 4025
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
S S + V CG + V++ ++G + G+G RLG G+ + T
Sbjct: 4026 SFSQAQQ--VICGQ-NCTFVIQ----------ANGTVLACGEGSYGRLGQGNSDDLHVLT 4072
Query: 498 CVPALIDYNFHKV--ACG---HSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVE 551
+ AL + ++ +CG HS+ LT SG VF+ G YG+LG+ N+D + P +E
Sbjct: 4073 VISALQGFVVTQLVTSCGSDGHSMA--LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4130
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
L GE V +++CG H AV+TS +++T+G G GRLG G+ ++K P V AL+ +
Sbjct: 4131 -ALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4189
Query: 612 KYIACGSNYSAAI 624
+ACG N++ A+
Sbjct: 4190 GQVACGLNHTLAV 4202
Score = 157 (60.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 43/156 (27%), Positives = 75/156 (48%)
Query: 257 GADKNVNYLGTRAD---VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGG 313
G NV LG D V P+ +E+ + + + G + + +T G+V+ WG G
Sbjct: 587 GGGDNVGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGA 643
Query: 314 RLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
LG G + ++P L+E L T + ++ G+ H M E+Y WG+ ++ G G G
Sbjct: 644 CLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGN--NSMGQCGQG 701
Query: 373 TDVSHWI-PKRISGPLEGLQVASVTCGPWHTALITS 407
PK++SG L+G+ + ++ G H+ T+
Sbjct: 702 NSTGPITKPKKVSG-LDGIAIQQISAGTSHSLAWTA 736
Score = 114 (45.2 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 54/238 (22%), Positives = 84/238 (35%)
Query: 120 KALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSV----SLTRDISSP-EVSVSL 174
K ++ G R DG LY D DS+ +L +DIS+ EVS
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 175 NHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPD 234
+H I+ +T S + +TN K + +
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA- 629
Query: 235 DCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRH 294
+ G VY WG C + G+ + A L P+ +E + I+ G H
Sbjct: 630 -LTSTGQVYAWG---CGACLGCGSSE--------ATALRPKLIEELAATRIVDISIGDSH 677
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKD-IVQPHLLESLTMTSVDFVTCGEFHTCAVT 351
L EV+ WG S G+ G G I +P + L ++ ++ G H+ A T
Sbjct: 678 VWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 735
Score = 46 (21.3 bits), Expect = 3.7e-43, Sum P(2) = 3.7e-43
Identities = 20/86 (23%), Positives = 42/86 (48%)
Query: 131 SKIDGWNDGGLYLEDSRDLTSNSAS--DSSVSLTRDISSP---EVSVS-LNHPISSPTSF 184
S+++ +D L+ SRD NS+ +S LT+ + E VS ++ + + F
Sbjct: 1551 SQLESLSDSWARLKHSRDWLCNSSYSFESDFDLTKSLGVHTLIENVVSFVSGDVGNAPGF 1610
Query: 185 -QTEGSISVNSERSHVASDNTNMQVK 209
+ E S+S + + S +A + ++ +
Sbjct: 1611 KEPEESMSTSPQASIIAMEQQQLRAE 1636
Score = 41 (19.5 bits), Expect = 5.0e-41, Sum P(3) = 5.0e-41
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 96 NNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSAS 155
N GK +D I V A W A SG+ + G DG L L + D+++
Sbjct: 3516 NGGKGLVD-IQPHWVSALAWPEEGPATAWSGESPELLLVGRMDGSLGLIEVVDVSTMHRR 3574
Query: 156 DSSVSLTRDIS 166
+ +D+S
Sbjct: 3575 ELEHCYRKDVS 3585
Score = 41 (19.5 bits), Expect = 5.0e-41, Sum P(3) = 5.0e-41
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 99 KRSLDLICKDKVEAEVWIAGLKALISSGQGGRSK--IDGWNDGGLYLEDSRDLTSNSASD 156
KR+L L ++ +A ++ + L+ GG+ K ID + + ++ + S S
Sbjct: 2582 KRALGLADLERAQAMIYKLVVHGLLEDQFGGKIKQEIDQQAEENDQAQQAQTPVTTSPSA 2641
Query: 157 SSVSLTRDISSPEVSVSLNHPIS 179
SS + SS E + + P++
Sbjct: 2642 SSTTSFMS-SSLEDTTTATTPVT 2663
Score = 40 (19.1 bits), Expect = 6.4e-41, Sum P(3) = 6.4e-41
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 118 GLKALISSGQGGRSKIDGWNDGGL 141
GL AL+S G GG I DG +
Sbjct: 3760 GL-ALVSGGLGGLMNIWSLRDGSV 3782
Score = 39 (18.8 bits), Expect = 5.0e-41, Sum P(3) = 5.0e-41
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 13 DIEQALIALKKGAQLLKYGRKGK 35
D E+A L + Q+L +G GK
Sbjct: 2037 DPEKAQCCLVENGQILTHGSGGK 2059
Score = 38 (18.4 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 678 NPGKPYRVCD 687
NPG+ ++CD
Sbjct: 2180 NPGEKVKICD 2189
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 522 (188.8 bits), Expect = 3.4e-42, Sum P(3) = 3.4e-42
Identities = 130/362 (35%), Positives = 187/362 (51%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G+R + P P E+ +L +A G + VT G++F G SGGRLG G
Sbjct: 4067 GSR--IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI 4124
Query: 326 PHLLESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
P LL SL V V G H A+T GE+Y WG+G G LGHG +S+ PK +
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED--GKLGHGNRMSYDRPKLV 4182
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
L G+ VA + CG H+A IT++G + T+G G +G LGHGD ++ P+ VE+L G R
Sbjct: 4183 EH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYR 4241
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I +ACG + + +T +++WGDGD +LG G + P + +L
Sbjct: 4242 AIDIACG---SGDAQTLCITDDD------NVWSWGDGDYGKLGRGGSDGCKLPYKIESLA 4292
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
KV CG +V LT SG V+T G + +LG+ + D + P V L G+ + I
Sbjct: 4293 GLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVA-ALQGKKIISI 4351
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H + EVYTWG G+LG G V + P LV AL+ +H+ + CGS ++
Sbjct: 4352 ATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTL 4411
Query: 623 AI 624
A+
Sbjct: 4412 AL 4413
Score = 478 (173.3 bits), Expect = 6.8e-37, Sum P(4) = 6.8e-37
Identities = 118/340 (34%), Positives = 173/340 (50%)
Query: 287 HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC--GE 344
HIA G + +V++ G+V+ GE + GRLG GV ++ PH L L V V G
Sbjct: 3023 HIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGG 3082
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 404
H A+T+ G++++WG+G G LGHG + P+ + L ++ V CG H+A
Sbjct: 3083 KHALALTLDGKVFSWGEGED--GKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAA 3139
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
I+S G+L+T+G G +G LGHGD P+ V +L+G R + VACG Q
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDA---------Q 3190
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
+ A G +F+WGDGD +LG G E P + L ++ CG ++ LT +G
Sbjct: 3191 TLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAG 3250
Query: 525 HVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGK 583
V+T G Y +LG+ + P + L G V +A GA H +T +VY WG
Sbjct: 3251 EVWTWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGD 3309
Query: 584 GANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+G+ G G+ K PALV L V +ACGS++S A
Sbjct: 3310 NDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 469 (170.2 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 134/395 (33%), Positives = 198/395 (50%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGT 363
++ WG G+LG G I P E+L++ + GE AVT G+L+ G G+
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4110
Query: 364 HNAGLLGHGTDVSHWIPKRISGPLEGLQV--ASVTCGPWHTALITSTGQLFTFGDGTFGV 421
G LG G S IP + G L+ + V +V G H +T+ G+++ +G+G G
Sbjct: 4111 --GGRLGVGGSDSWAIPTLL-GSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4167
Query: 422 LGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
LGHG+R + P+ VE L+G+ +ACG H+AA+ +SG + TWG G
Sbjct: 4168 LGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT-----------ASGHVLTWGKGR 4216
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGN 539
RLGHGD E +L+P V AL+ Y +ACG + T+ +T +V++ G YG+LG
Sbjct: 4217 YGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4276
Query: 540 PNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRK 598
+DG KLP +E LAG V ++ CG+ LT VYTWGKG RLGHG V+ +
Sbjct: 4277 GGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVR 4335
Query: 599 TPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSACRQA--FGFT 648
P V AL+ + + IA GS + A ++ W + E QL +A ++
Sbjct: 4336 RPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAAL 4395
Query: 649 RKRHNC-YNCGLVHCHSCSSRKALRAALAPNPGKP 682
+ +H CG H + S+ + L L P P P
Sbjct: 4396 QGKHIVKVTCGSAHTLALSTSQ-LSERLRPLPNPP 4429
Score = 442 (160.7 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 108/309 (34%), Positives = 156/309 (50%)
Query: 265 LGTRADVLLPR--PLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
LG +V LP P+ V+ + G +HA +T G+VF+WGE G+LGHG
Sbjct: 3053 LGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT 3112
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
+ +P L+E+L + V CG H+ A++ GELYTWG G + G LGHG + + PK
Sbjct: 3113 LDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEY--GRLGHGDNTTQLKPKL 3170
Query: 383 ISGPLEGLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLS 440
++ L G +V V CG T +T G +F++GDG FG LG G + P E+E LS
Sbjct: 3171 VTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLS 3229
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
G+ + + CG + A+ +G+++TWG GD RLGHG + KP +
Sbjct: 3230 GIGVVQIECGAQFSLALTR-----------AGEVWTWGKGDYYRLGHGGDQHVRKPQPIG 3278
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESV 559
L VA G + +T +G V+ G +GQ G+ N K P LV L V
Sbjct: 3279 GLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-LDAVFV 3337
Query: 560 EEIACGAYH 568
+ACG+ H
Sbjct: 3338 NRVACGSSH 3346
Score = 426 (155.0 bits), Expect = 7.0e-35, Sum P(3) = 7.0e-35
Identities = 113/327 (34%), Positives = 167/327 (51%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGT 363
V WG +LG G + P ++++ + G V+ G++Y G+GT
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 364 HNAGLLGHGTDVSHWIPKRISGPLEGLQVA---SVTCGPWHTALITSTGQLFTFGDGTFG 420
+ G LG G V+H +P P+ V +V G H +T G++F++G+G G
Sbjct: 3048 N--GRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 421 VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
LGHG+R + PR VE+L + VACG H+AA+ S G+L+TWG G
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS-----------SQGELYTWGLG 3152
Query: 481 DKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLG 538
+ RLGHGD +LKP V AL +VACG + T+ LT G VF+ G +G+LG
Sbjct: 3153 EYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3212
Query: 539 NPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
++G P +E +L+G V +I CGA LT EV+TWGKG RLGHG +
Sbjct: 3213 RGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3271
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAI 624
+ P + L+ R V ++A G+ + A+
Sbjct: 3272 RKPQPIGGLRGRRVIHVAVGALHCLAV 3298
Score = 417 (151.9 bits), Expect = 8.5e-31, Sum P(3) = 8.5e-31
Identities = 98/287 (34%), Positives = 143/287 (49%)
Query: 291 GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
G +H +T +GEV+ WGE G+LGHG +P L+E L SV + CG H+ A+
Sbjct: 4144 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAI 4203
Query: 351 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW--HTALITST 408
T +G + TWG G + G LGHG PK + L G + + CG T IT
Sbjct: 4204 TASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GYRAIDIACGSGDAQTLCITDD 4260
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
++++GDG +G LG G P ++ESL+GL + V CG + A+ +
Sbjct: 4261 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK--------- 4311
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFT 528
SG ++TWG GD +RLGHG + +P V AL +A G V + SG V+T
Sbjct: 4312 --SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYT 4369
Query: 529 MGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
G GQLG+ + P LV L G+ + ++ CG+ H L++
Sbjct: 4370 WGDNDEGQLGDGTVTAIQRPRLVA-ALQGKHIVKVTCGSAHTLALST 4415
Score = 383 (139.9 bits), Expect = 6.5e-29, Sum P(2) = 6.5e-29
Identities = 94/270 (34%), Positives = 142/270 (52%)
Query: 257 GADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
G D + + G R P+ +E + V IACG H+A +T G V TWG+ GRLG
Sbjct: 4163 GEDGKLGH-GNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLG 4221
Query: 317 HGVGKDIVQPHLLESLT-MTSVDFVTCG--EFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
HG +D ++P L+E+L ++D + CG + T +T +++WGDG + G LG G
Sbjct: 4222 HGDSEDQLRPKLVEALLGYRAID-IACGSGDAQTLCITDDDNVWSWGDGDY--GKLGRGG 4278
Query: 374 DVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
+P +I L GL V V CG + +T +G ++T+G G F LGHG +V P
Sbjct: 4279 SDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP 4337
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
++V +L G + I++A G H A + SG+++TWGD D+ +LG G
Sbjct: 4338 KKVAALQGKKIISIATGSLHCVACSD-----------SGEVYTWGDNDEGQLGDGTVTAI 4386
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
+P V AL + KV CG + T+ L+TS
Sbjct: 4387 QRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 322 (118.4 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 83/244 (34%), Positives = 124/244 (50%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE G D + + G R P+ +E + V IACG H+A +T
Sbjct: 4155 GEVYAWGE---------GEDGKLGH-GNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4204
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVTCG--EFHTCAVTMAGEL 356
G V TWG+ GRLGHG +D ++P L+E+L ++D + CG + T +T +
Sbjct: 4205 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID-IACGSGDAQTLCITDDDNV 4263
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
++WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G
Sbjct: 4264 WSWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGK 4320
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFT 476
G F LGHG +V P++V +L G + I++A G H A + + G+L
Sbjct: 4321 GDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQL-- 4378
Query: 477 WGDG 480
GDG
Sbjct: 4379 -GDG 4381
Score = 301 (111.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 96/300 (32%), Positives = 139/300 (46%)
Query: 342 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH 401
C H A+ Y+WG G + LGHG + +P +I+ LE V SV CG +
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSY 679
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
+A IT G L T+G GT+ LGHG+ + S P V +LS + VA G
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDA------- 732
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
S A S G +F WGDGD +LG+G+ L+P V +L +V G +V L+
Sbjct: 733 --HSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALS 788
Query: 522 TSGHVFTMG-STVYG-QLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
+ G ++T G +T G QL + G +P LV L + + ++A H L+S EV
Sbjct: 789 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSS-LQHKRIVDVAVSVAHCLALSSSGEV 847
Query: 579 YTWGKGANGRLGHGDVEDR---KTPALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQ 635
+ WG+ + ++ V +TP LV +L IAC S S W S+ Q
Sbjct: 848 FGWGRNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLV-----WTQSSHQ 901
Score = 257 (95.5 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
Identities = 75/208 (36%), Positives = 104/208 (50%)
Query: 422 LGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
LG V P +++S LR I +A G + ++ IV+Q GK++ G+G
Sbjct: 2999 LGGLKGSKVKVPTFSQTISRLRPIHIAGG---SKSLF--IVSQD------GKVYACGEGT 3047
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYNFHKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLGN 539
RLG G P +P L Y KVA G + LT G VF+ G G+LG+
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3107
Query: 540 PNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRK 598
N P LVE L + + ++ACG+ H A ++S+ E+YTWG G GRLGHGD +
Sbjct: 3108 GNRTTLDKPRLVE-ALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQL 3166
Query: 599 TPALVEALKDRHVKYIACGSNYSAAICL 626
P LV AL R V +ACGS + + L
Sbjct: 3167 KPKLVTALAGRRVVQVACGSRDAQTLAL 3194
Score = 256 (95.2 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 72/215 (33%), Positives = 104/215 (48%)
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
S+ ++WG G+ +RLGHGD R PT + AL + V CG S + +T G++ T
Sbjct: 633 SNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTW 692
Query: 530 GSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACGA--YHVAVLTSRNEVYTWGKGAN 586
G Y +LG+ N+D + LP LV L+ V ++A G+ H LTS V+ WG G
Sbjct: 693 GRGTYARLGHGNSDDRSLPTLVV-ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI-------------CL-HKWVSS 632
G+LG+G+ P LVE+L V+ + GS +S A+ CL H+ V
Sbjct: 752 GKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809
Query: 633 AEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSS 667
+ Q CS R KR + HC + SS
Sbjct: 810 SVQ-GCSVPRLVSSLQHKRIVDVAVSVAHCLALSS 843
Score = 252 (93.8 bits), Expect = 2.0e-12, Sum P(4) = 2.0e-12
Identities = 86/266 (32%), Positives = 121/266 (45%)
Query: 274 PRPLESNVVLDVH-HIA--CGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
P P+E V DV IA C RH + ++WG RLGHG P +
Sbjct: 605 PLPMEE-VAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIA 663
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL 390
+L V V CG ++ A+T G L TWG GT+ LGHG +P + + +
Sbjct: 664 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY--ARLGHGNSDDRSLPTLVVALSDHM 721
Query: 391 QV-ASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
V ++ G H+ +TS G +F +GDG +G LG+G+ P VESL R V
Sbjct: 722 VVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFA 779
Query: 450 GVWHTAAVVEVIVTQSSASVSS-GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
G +Q S ++SS G+L+TWG LGH E ++ VP L+ H
Sbjct: 780 G------------SQFSVALSSEGQLYTWGKA--TCLGHQLVERSVQGCSVPRLVSSLQH 825
Query: 509 K----VACGHSLTVGLTTSGHVFTMG 530
K VA + + L++SG VF G
Sbjct: 826 KRIVDVAVSVAHCLALSSSGEVFGWG 851
Score = 173 (66.0 bits), Expect = 0.00086, Sum P(5) = 0.00086
Identities = 56/201 (27%), Positives = 93/201 (46%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
+ +AC +++++G+++TW RL + + + + ++ C
Sbjct: 574 IKQVACCETQMLILSQEGKLYTW------RLAKPEAEPLPMEEVAHDVFISIAGH--CEG 625
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 404
H A+ Y+WG G + LGHG + +P +I+ LE V SV CG ++A
Sbjct: 626 RHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAA 682
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVW--HTAAVVEVIV 462
IT G L T+G GT+ LGHG+ + S P V +LS + VA G H+ A+ +
Sbjct: 683 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 742
Query: 463 TQSSASVSSGKLFTWGDGDKN 483
+ GKL G+G+ N
Sbjct: 743 VFAWGDGDYGKL---GNGNCN 760
Score = 158 (60.7 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 46/166 (27%), Positives = 76/166 (45%)
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKEPR-LKPTCVPALIDYNFHKVACGHSLTVGLT 521
TQ GKL+TW RL + EP ++ I H C + +
Sbjct: 582 TQMLILSQEGKLYTW------RLAKPEAEPLPMEEVAHDVFISIAGH---CEGRHFLAID 632
Query: 522 TSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYT 580
++ + ++ G+ +LG+ + + +P + L V+ + CG + A +T + T
Sbjct: 633 SNHNAYSWGTGEDHRLGHGDTHARAVPTKIA-ALEQHCVQSVYCGCSYSAAITCGGNLLT 691
Query: 581 WGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
WG+G RLGHG+ +DR P LV AL D V +A GS + ++ L
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 737
Score = 66 (28.3 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 25/105 (23%), Positives = 45/105 (42%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +Y WG+ C + +++V G L+ L+ ++DV A V H ++
Sbjct: 791 GQLYTWGKATC--LGHQLVERSVQ--GCSVPRLVSS-LQHKRIVDV---AVSVAHCLALS 842
Query: 300 RQGEVFTWGEESGGRL-GHGVGKD-IVQPHLLESLTMTSVDFVTC 342
GEVF WG ++ V + +++ +L SL + C
Sbjct: 843 SSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIAC 887
Score = 50 (22.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 994 LANSSCVSESSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPGVYITLV--A 1051
L N+S E + +SMP Q+ E + ++ Q+ E + +P + +V A
Sbjct: 1652 LLNASIQQEQEKKPQSMPKQELEEQEEEETLLRRLNERQIHGEG--ELDPALMQDIVDFA 1709
Query: 1052 LRDGTRDLKRVR 1063
L+D D++ R
Sbjct: 1710 LQDSC-DVETAR 1720
Score = 47 (21.6 bits), Expect = 6.8e-37, Sum P(4) = 6.8e-37
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1016 ENGTRPRSPALSVSSHQVEAEWIEQYE 1042
E RP+ P+LS + E + QYE
Sbjct: 3830 EQAPRPQDPSLSTLLQPLIPELLRQYE 3856
Score = 45 (20.9 bits), Expect = 3.4e-42, Sum P(3) = 3.4e-42
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 51 IWISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRS 101
+ + ++ ER+ L S+ PGQ ++ R++ D L SL+ G S
Sbjct: 1012 VLLPTAAERAQTLTSLLPSEPGQASSAGHRFMT---DLLVSSLMAEGGLES 1059
Score = 44 (20.5 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 977 GRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDS 1015
G++ Q ++L + ++ V + + E G E+ P DS
Sbjct: 1977 GKEGQYDLQLADSALNVASPTEPEREDVSGSEASPTSDS 2015
Score = 41 (19.5 bits), Expect = 2.0e-12, Sum P(4) = 2.0e-12
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 540 PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
P A+GK L+ +G EE+ + L S N V
Sbjct: 2168 PTAEGKARVLLTASHSGSVAEELVALLRRLHTLPSWNPV 2206
Score = 40 (19.1 bits), Expect = 3.8e-34, Sum P(3) = 3.8e-34
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 961 GTGGLSQFLRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDSENGTR 1020
G GG Q +R+ G + VI + G++ LA + + G Q S N
Sbjct: 3264 GHGG-DQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFV 3322
Query: 1021 PRSPALSV 1028
+ PAL +
Sbjct: 3323 NKKPALVI 3330
Score = 39 (18.8 bits), Expect = 0.00086, Sum P(5) = 0.00086
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 472 GKLFTWGDGDKNRLGHG 488
G + WGD D N G G
Sbjct: 1934 GADWKWGDQDGNPPGEG 1950
Score = 38 (18.4 bits), Expect = 3.4e-42, Sum P(3) = 3.4e-42
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHA 295
DA G VY WG DN G + N + L+ + + V V+ +ACG H+
Sbjct: 3300 DA-GQVYAWG----DN--DHGQQGSGNTFVNKKPALV---IGLDAVF-VNRVACGSSHS 3347
Score = 37 (18.1 bits), Expect = 6.8e-37, Sum P(4) = 6.8e-37
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 301 QGEVFTWGEESGGRLGHG 318
+G + WG++ G G G
Sbjct: 1933 RGADWKWGDQDGNPPGEG 1950
Score = 37 (18.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRK 650
KW ++A Q GFTR+
Sbjct: 2506 KWPAAATDAQLIGQIMEMGFTRR 2528
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 491 (177.9 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 126/369 (34%), Positives = 183/369 (49%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 2745 AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 2804
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 2805 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 2861
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V V G H+A +T+ G L+T+G G +G LGH D ++ P+ VE+L G R I
Sbjct: 2862 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVID 2921
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 2922 IACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 2972
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 2973 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 3031
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ H T EVYTWG G+LG G + P LV AL+ + V +ACGS ++ A
Sbjct: 3032 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 3091
Query: 626 LHKWVSSAE 634
K S+ +
Sbjct: 3092 TSKPASAGK 3100
Score = 477 (173.0 bits), Expect = 5.0e-37, Sum P(3) = 5.0e-37
Identities = 118/357 (33%), Positives = 189/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V++ GE + GRLG G+ V P +
Sbjct: 1789 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 1848
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 1849 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 1905
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A +TS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 1906 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 1965
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 1966 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2016
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 2017 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2075
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 2076 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 464 (168.4 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 123/333 (36%), Positives = 178/333 (53%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
T + +VF WG +LG G I P E+L+ +V V G AVT+ G++Y+
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 1824
Query: 359 WGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALITSTGQLFTFG 415
G+ T+ G LG G IP++I+ L V V G H +T G++F++G
Sbjct: 1825 CGEATN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 1881
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
+G G LGH R N PR +E+L R +ACG H+AA+ SSG+L+
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT-----------SSGELY 1930
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTV 533
TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT G VF+ G
Sbjct: 1931 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 1990
Query: 534 YGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
+G+LG ++G +P +E +L G+ V +I CGA LT V+TWGKG RLGHG
Sbjct: 1991 FGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 2049
Query: 593 -DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 2050 SDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 2081
Score = 436 (158.5 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 107/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + S+ V+ + G RHA +T G+VF+WGE G+LGH + +P L
Sbjct: 1842 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 1901
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 1902 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 1958
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 1959 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 2018
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 2019 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 2067
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T SG V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 2068 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 2126
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 2127 SSHSVAWTT 2135
Score = 433 (157.5 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 129/392 (32%), Positives = 184/392 (46%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 2726 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATG 2784
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 2785 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2842
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + VA G H+A V ++G L+TWG
Sbjct: 2843 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-----------AAGDLYTWGK 2891
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGH D E +LKP V AL + +ACG + T+ LT V++ G YG+L
Sbjct: 2892 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 2951
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 2952 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 3010
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 3011 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 3070
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 3071 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 3102
Score = 393 (143.4 bits), Expect = 6.4e-31, Sum P(2) = 6.4e-31
Identities = 97/286 (33%), Positives = 147/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE D + + G R+ PR +ES ++V +A G H+A VT
Sbjct: 2832 GEVYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 2881
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
G+++TWG+ GRLGH +D ++P L+E+L V + CG + T +T ++
Sbjct: 2882 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 2941
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 2942 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 2998
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 2999 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-----------DGEVYTW 3047
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 3048 GDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3093
Score = 282 (104.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 74/221 (33%), Positives = 111/221 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A GD+Y WG+ + G + + L + L L+ + V+D IACG A
Sbjct: 2882 AAGDLYTWGK---GRYGRLGHSDSEDQLKPK----LVEALQGHRVID---IACGSGDAQT 2931
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 2932 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 2991
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H T G+++T+G
Sbjct: 2992 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3048
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 3049 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3089
Score = 257 (95.5 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 75/238 (31%), Positives = 112/238 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 1927 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 1976
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 1977 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2036
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHG+DV P+ + G L G ++ V G H +T +GQ++ +GD
Sbjct: 2037 TWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2093
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 2094 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 2149
Score = 245 (91.3 bits), Expect = 3.6e-11, Sum P(4) = 3.6e-11
Identities = 79/242 (32%), Positives = 112/242 (46%)
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVA 448
G + T G TA I + ++F +G LG + P E+LS L + VA
Sbjct: 1750 GSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 1807
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNF 507
G + ++ V V GK+++ G+ RLG G + P + AL Y
Sbjct: 1808 GG---SKSLFAVTV--------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVV 1856
Query: 508 HKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIAC 564
KVA G LT G VF+ G G+LG+ + P L+E L + + +IAC
Sbjct: 1857 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIAC 1915
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+ H A LTS E+YTWG G GRLGHGD + P +V+ L V +ACGS + +
Sbjct: 1916 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 1975
Query: 625 CL 626
L
Sbjct: 1976 AL 1977
Score = 175 (66.7 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
SG ++ WG + +LG G + ++K PT AL ++ G +T G ++
Sbjct: 2725 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2783
Query: 530 GSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIAC--GAYHVAVLTSRNEVYTWGKGAN 586
G G+LG + P L+E + ++++A G H L+S EVY+WG+ +
Sbjct: 2784 GYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2842
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+LGHG+ P ++E+L+ V +A G +SA +
Sbjct: 2843 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 2880
Score = 51 (23.0 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 30/132 (22%), Positives = 51/132 (38%)
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLD----LICKDKVEAEVWIAGLKALISSG 126
PG + + + + ++D S + +SLD L+ D V + L +G
Sbjct: 2313 PGAASIIAETMTKTKEDVESQNKTSGPEPQSLDEFTSLLIPDDTRVVVDLLKLSVCSRAG 2372
Query: 127 QGGRSKIDGWNDG-GLYLEDSRD----LTSNSASDSSV-SLTRDISSPEVSVSLNHPISS 180
GR + G G+ D L D + S + +SS V V +HP +
Sbjct: 2373 DRGREVLSAVLSGMGIAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTD 2432
Query: 181 PTSFQTEGSISV 192
TS T G++ +
Sbjct: 2433 DTS--TSGTVKI 2442
Score = 39 (18.8 bits), Expect = 5.0e-37, Sum P(3) = 5.0e-37
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 61 LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105
LKLA+ S ++P + A+F + R + + + R +DLI
Sbjct: 485 LKLAAKSFLLPSVQYAMFCGWQRLIPEGIDIGEPLTDCLRDVDLI 529
Score = 38 (18.4 bits), Expect = 3.6e-11, Sum P(4) = 3.6e-11
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 357 YTWGDGTHNA-GLL----GHGTDV-------SHW 378
Y WG TH + GL+ +G D+ SHW
Sbjct: 1465 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 1498
Score = 37 (18.1 bits), Expect = 5.0e-37, Sum P(3) = 5.0e-37
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R LPRL
Sbjct: 2652 CMA--SRVAVALDKRTPLPRL 2670
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 491 (177.9 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 126/369 (34%), Positives = 183/369 (49%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 2781 AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 2840
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 2841 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 2897
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V V G H+A +T+ G L+T+G G +G LGH D ++ P+ VE+L G R I
Sbjct: 2898 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVID 2957
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 2958 IACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 3008
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 3009 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 3067
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ H T EVYTWG G+LG G + P LV AL+ + V +ACGS ++ A
Sbjct: 3068 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 3127
Query: 626 LHKWVSSAE 634
K S+ +
Sbjct: 3128 TSKPASAGK 3136
Score = 477 (173.0 bits), Expect = 5.2e-37, Sum P(3) = 5.2e-37
Identities = 118/357 (33%), Positives = 189/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V++ GE + GRLG G+ V P +
Sbjct: 1789 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 1848
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 1849 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 1905
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A +TS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 1906 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 1965
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 1966 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2016
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 2017 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2075
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 2076 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 464 (168.4 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 123/333 (36%), Positives = 178/333 (53%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
T + +VF WG +LG G I P E+L+ +V V G AVT+ G++Y+
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 1824
Query: 359 WGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALITSTGQLFTFG 415
G+ T+ G LG G IP++I+ L V V G H +T G++F++G
Sbjct: 1825 CGEATN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 1881
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
+G G LGH R N PR +E+L R +ACG H+AA+ SSG+L+
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT-----------SSGELY 1930
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTV 533
TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT G VF+ G
Sbjct: 1931 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 1990
Query: 534 YGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
+G+LG ++G +P +E +L G+ V +I CGA LT V+TWGKG RLGHG
Sbjct: 1991 FGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 2049
Query: 593 -DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 2050 SDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 2081
Score = 436 (158.5 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 107/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + S+ V+ + G RHA +T G+VF+WGE G+LGH + +P L
Sbjct: 1842 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 1901
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 1902 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 1958
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 1959 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 2018
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 2019 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 2067
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T SG V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 2068 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 2126
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 2127 SSHSVAWTT 2135
Score = 433 (157.5 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 129/392 (32%), Positives = 184/392 (46%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 2762 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATG 2820
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 2821 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2878
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + VA G H+A V ++G L+TWG
Sbjct: 2879 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-----------AAGDLYTWGK 2927
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGH D E +LKP V AL + +ACG + T+ LT V++ G YG+L
Sbjct: 2928 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 2987
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 2988 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 3046
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 3047 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 3106
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 3107 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 3138
Score = 393 (143.4 bits), Expect = 6.6e-31, Sum P(2) = 6.6e-31
Identities = 97/286 (33%), Positives = 147/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE D + + G R+ PR +ES ++V +A G H+A VT
Sbjct: 2868 GEVYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 2917
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
G+++TWG+ GRLGH +D ++P L+E+L V + CG + T +T ++
Sbjct: 2918 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 2977
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 2978 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3034
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 3035 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-----------DGEVYTW 3083
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 3084 GDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3129
Score = 282 (104.3 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 74/221 (33%), Positives = 111/221 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A GD+Y WG+ + G + + L + L L+ + V+D IACG A
Sbjct: 2918 AAGDLYTWGK---GRYGRLGHSDSEDQLKPK----LVEALQGHRVID---IACGSGDAQT 2967
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 2968 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 3027
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H T G+++T+G
Sbjct: 3028 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3084
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 3085 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3125
Score = 257 (95.5 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 75/238 (31%), Positives = 112/238 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 1927 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 1976
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 1977 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2036
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHG+DV P+ + G L G ++ V G H +T +GQ++ +GD
Sbjct: 2037 TWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2093
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 2094 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 2149
Score = 245 (91.3 bits), Expect = 3.8e-11, Sum P(4) = 3.8e-11
Identities = 79/242 (32%), Positives = 112/242 (46%)
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVA 448
G + T G TA I + ++F +G LG + P E+LS L + VA
Sbjct: 1750 GSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 1807
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNF 507
G + ++ V V GK+++ G+ RLG G + P + AL Y
Sbjct: 1808 GG---SKSLFAVTV--------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVV 1856
Query: 508 HKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIAC 564
KVA G LT G VF+ G G+LG+ + P L+E L + + +IAC
Sbjct: 1857 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIAC 1915
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+ H A LTS E+YTWG G GRLGHGD + P +V+ L V +ACGS + +
Sbjct: 1916 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 1975
Query: 625 CL 626
L
Sbjct: 1976 AL 1977
Score = 175 (66.7 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
SG ++ WG + +LG G + ++K PT AL ++ G +T G ++
Sbjct: 2761 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2819
Query: 530 GSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIAC--GAYHVAVLTSRNEVYTWGKGAN 586
G G+LG + P L+E + ++++A G H L+S EVY+WG+ +
Sbjct: 2820 GYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2878
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+LGHG+ P ++E+L+ V +A G +SA +
Sbjct: 2879 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 2916
Score = 51 (23.0 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 30/132 (22%), Positives = 51/132 (38%)
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLD----LICKDKVEAEVWIAGLKALISSG 126
PG + + + + ++D S + +SLD L+ D V + L +G
Sbjct: 2313 PGAASIIAETMTKTKEDVESQNKTSGPEPQSLDEFTSLLIPDDTRVVVDLLKLSVCSRAG 2372
Query: 127 QGGRSKIDGWNDG-GLYLEDSRD----LTSNSASDSSV-SLTRDISSPEVSVSLNHPISS 180
GR + G G+ D L D + S + +SS V V +HP +
Sbjct: 2373 DRGREVLSAVLSGMGIAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTD 2432
Query: 181 PTSFQTEGSISV 192
TS T G++ +
Sbjct: 2433 DTS--TSGTVKI 2442
Score = 39 (18.8 bits), Expect = 5.2e-37, Sum P(3) = 5.2e-37
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 61 LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105
LKLA+ S ++P + A+F + R + + + R +DLI
Sbjct: 485 LKLAAKSFLLPSVQYAMFCGWQRLIPEGIDIGEPLTDCLRDVDLI 529
Score = 38 (18.4 bits), Expect = 3.8e-11, Sum P(4) = 3.8e-11
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 357 YTWGDGTHNA-GLL----GHGTDV-------SHW 378
Y WG TH + GL+ +G D+ SHW
Sbjct: 1465 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 1498
Score = 37 (18.1 bits), Expect = 5.2e-37, Sum P(3) = 5.2e-37
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R LPRL
Sbjct: 2688 CMA--SRVAVALDKRTPLPRL 2706
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 491 (177.9 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 126/369 (34%), Positives = 183/369 (49%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3916 AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 3975
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 3976 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 4032
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V V G H+A +T+ G L+T+G G +G LGH D ++ P+ VE+L G R I
Sbjct: 4033 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVID 4092
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 4093 IACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 4143
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4144 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4202
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ H T EVYTWG G+LG G + P LV AL+ + V +ACGS ++ A
Sbjct: 4203 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4262
Query: 626 LHKWVSSAE 634
K S+ +
Sbjct: 4263 TSKPASAGK 4271
Score = 477 (173.0 bits), Expect = 8.3e-37, Sum P(3) = 8.3e-37
Identities = 118/357 (33%), Positives = 189/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V++ GE + GRLG G+ V P +
Sbjct: 2924 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 2983
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 2984 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3040
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A +TS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 3041 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3100
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3101 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3151
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3152 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3210
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3211 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 464 (168.4 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 123/333 (36%), Positives = 178/333 (53%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
T + +VF WG +LG G I P E+L+ +V V G AVT+ G++Y+
Sbjct: 2900 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2959
Query: 359 WGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALITSTGQLFTFG 415
G+ T+ G LG G IP++I+ L V V G H +T G++F++G
Sbjct: 2960 CGEATN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3016
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
+G G LGH R N PR +E+L R +ACG H+AA+ SSG+L+
Sbjct: 3017 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT-----------SSGELY 3065
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTV 533
TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT G VF+ G
Sbjct: 3066 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3125
Query: 534 YGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
+G+LG ++G +P +E +L G+ V +I CGA LT V+TWGKG RLGHG
Sbjct: 3126 FGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3184
Query: 593 -DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3185 SDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3216
Score = 436 (158.5 bits), Expect = 2.3e-32, Sum P(3) = 2.3e-32
Identities = 107/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + S+ V+ + G RHA +T G+VF+WGE G+LGH + +P L
Sbjct: 2977 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3036
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 3037 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 3093
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 3094 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3153
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 3154 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 3202
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T SG V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 3203 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 3261
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 3262 SSHSVAWTT 3270
Score = 433 (157.5 bits), Expect = 6.1e-35, Sum P(2) = 6.1e-35
Identities = 129/392 (32%), Positives = 184/392 (46%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATG 3955
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 3956 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + VA G H+A V ++G L+TWG
Sbjct: 4014 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-----------AAGDLYTWGK 4062
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGH D E +LKP V AL + +ACG + T+ LT V++ G YG+L
Sbjct: 4063 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4122
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4123 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4181
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 4182 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4241
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 4242 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4273
Score = 421 (153.3 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 112/361 (31%), Positives = 174/361 (48%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+V+ P E L V +AC + +++R G V+T S D++ P L
Sbjct: 383 ANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQL 432
Query: 329 LESLTMTSVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS-- 384
++ L ++ + H A+ GE+Y+WG G + G LGHG V PK IS
Sbjct: 433 VQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAF 490
Query: 385 -GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
G G V + CG ++A IT+ G+L+T+G G +G LGHG ++ + P V L GL+
Sbjct: 491 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 550
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I VACG Q+ A +G++++WGDGD +LG G + P + L
Sbjct: 551 VIDVACGSGDA---------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 601
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
D + KV CG ++ LT G V++ G +LG+ + + P L+E L G+ V ++
Sbjct: 602 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 660
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H LT +EV++WG + + P + L +H+ IACG S
Sbjct: 661 AAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSF 720
Query: 623 A 623
A
Sbjct: 721 A 721
Score = 393 (143.4 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 97/286 (33%), Positives = 147/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE D + + G R+ PR +ES ++V +A G H+A VT
Sbjct: 4003 GEVYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4052
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
G+++TWG+ GRLGH +D ++P L+E+L V + CG + T +T ++
Sbjct: 4053 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4112
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 4113 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4169
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 4170 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-----------DGEVYTW 4218
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 4219 GDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4264
Score = 372 (136.0 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
Identities = 106/338 (31%), Positives = 168/338 (49%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +G +++ P E L V V C E ++ G +YT +N+ +L
Sbjct: 375 GLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA---YNSDMLA-- 429
Query: 373 TDVSHWIPKRISGPLEG--LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
P+ + G +++A+ + G + AL +TG+++++G G G LGHGD +
Sbjct: 430 -------PQLVQGLASRNIVKIAAHSDGHHYLAL-AATGEVYSWGCGDGGRLGHGDTVPL 481
Query: 431 SYPREVESLSGLRT----IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
P+ + + SG + + +ACG ++AA+ + G+L+TWG G+ RLG
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRLG 530
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGNPNADG 544
HG E P V L VACG + T+ +T +G V++ G YG+LG +DG
Sbjct: 531 HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 590
Query: 545 -KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
K P L+E KL V ++ CG+ LT +VY+WGKG N RLGHG E + P L+
Sbjct: 591 CKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 649
Query: 604 EALKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
E L+ + V +A GS + A+ +H W S+ +Q Q
Sbjct: 650 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN-DQCQ 686
Score = 362 (132.5 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 97/310 (31%), Positives = 148/310 (47%)
Query: 233 PDDCDALGDVYIWGEVIC--DNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIAC 290
P C+ L + + +V C + + V +D+L P+ ++ ++ IA
Sbjct: 388 PIQCEGLASLGVM-QVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAA 446
Query: 291 ---GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS----VDFVTCG 343
G + AL GEV++WG GGRLGHG + +P ++ + + V + CG
Sbjct: 447 HSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 505
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW--H 401
++ A+T GELYTWG G N G LGHG+ IP ++G L+GL+V V CG
Sbjct: 506 STYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQ 562
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
T +T GQ++++GDG +G LG G P+ +E L L I V CG + A+ +
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK-- 620
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
G++++WG GD RLGHG +E P + L VA G + + LT
Sbjct: 621 ---------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 671
Query: 522 TSGHVFTMGS 531
V + GS
Sbjct: 672 EDSEVHSWGS 681
Score = 340 (124.7 bits), Expect = 6.2e-24, Sum P(3) = 6.2e-24
Identities = 93/281 (33%), Positives = 138/281 (49%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRA-DVLLPRPLESNVVLDVHHIACGVRHAA 296
A G+VY WG C + + G V + + +VV HIACG ++A
Sbjct: 458 ATGEVYSWG---CGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV----HIACGSTYSA 510
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAG 354
+T +GE++TWG + GRLGHG +D P L+ L V V CG + T AVT G
Sbjct: 511 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 570
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++++WGDG + G LG G PK I L+ L V V CG + +T GQ++++
Sbjct: 571 QVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSW 627
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
G G LGHG ++V YP+ +E L G + I VA G H A+ E ++
Sbjct: 628 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE-----------DSEV 676
Query: 475 FTWGDGDKNRLGHGD--KEPRLKPTCVPALIDYNFHKVACG 513
+WG D+ + H D + + +PT +P L + +ACG
Sbjct: 677 HSWGSNDQCQ--HFDTLRVTKPEPTALPGLDTKHIVGIACG 715
Score = 282 (104.3 bits), Expect = 8.6e-19, Sum P(2) = 8.6e-19
Identities = 74/221 (33%), Positives = 111/221 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A GD+Y WG+ + G + + L + L L+ + V+D IACG A
Sbjct: 4053 AAGDLYTWGK---GRYGRLGHSDSEDQLKPK----LVEALQGHRVID---IACGSGDAQT 4102
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 4103 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4162
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H T G+++T+G
Sbjct: 4163 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4219
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 4220 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 257 (95.5 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 75/238 (31%), Positives = 112/238 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 3062 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 3111
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 3112 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3171
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHG+DV P+ + G L G ++ V G H +T +GQ++ +GD
Sbjct: 3172 TWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3228
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 3229 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 3284
Score = 245 (91.3 bits), Expect = 7.2e-11, Sum P(4) = 7.2e-11
Identities = 79/242 (32%), Positives = 112/242 (46%)
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVA 448
G + T G TA I + ++F +G LG + P E+LS L + VA
Sbjct: 2885 GSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2942
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNF 507
G + ++ V V GK+++ G+ RLG G + P + AL Y
Sbjct: 2943 GG---SKSLFAVTV--------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVV 2991
Query: 508 HKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIAC 564
KVA G LT G VF+ G G+LG+ + P L+E L + + +IAC
Sbjct: 2992 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIAC 3050
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+ H A LTS E+YTWG G GRLGHGD + P +V+ L V +ACGS + +
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3110
Query: 625 CL 626
L
Sbjct: 3111 AL 3112
Score = 175 (66.7 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
SG ++ WG + +LG G + ++K PT AL ++ G +T G ++
Sbjct: 3896 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3954
Query: 530 GSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIAC--GAYHVAVLTSRNEVYTWGKGAN 586
G G+LG + P L+E + ++++A G H L+S EVY+WG+ +
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+LGHG+ P ++E+L+ V +A G +SA +
Sbjct: 4014 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4051
Score = 59 (25.8 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 573 TSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSS 632
T R +V+ WG +LG K P+ E L +V +A GS A+ + V S
Sbjct: 2900 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2959
Score = 51 (23.0 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 30/132 (22%), Positives = 51/132 (38%)
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLD----LICKDKVEAEVWIAGLKALISSG 126
PG + + + + ++D S + +SLD L+ D V + L +G
Sbjct: 3448 PGAASIIAETMTKTKEDVESQNKTSGPEPQSLDEFTSLLIPDDTRVVVDLLKLSVCSRAG 3507
Query: 127 QGGRSKIDGWNDG-GLYLEDSRD----LTSNSASDSSV-SLTRDISSPEVSVSLNHPISS 180
GR + G G+ D L D + S + +SS V V +HP +
Sbjct: 3508 DRGREVLSAVLSGMGIAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTD 3567
Query: 181 PTSFQTEGSISV 192
TS T G++ +
Sbjct: 3568 DTS--TSGTVKI 3577
Score = 41 (19.5 bits), Expect = 8.3e-37, Sum P(3) = 8.3e-37
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 62 KLASVSKIIPGQRT--AVFQRYLRP-EKDYLSFSLIYNNGKRSLDLI 105
K A K I Q + F R P +KD ++ + ++GK+ L L+
Sbjct: 907 KEAQKEKEIDEQEANASTFHRSRTPLDKDLINTGIYESSGKQCLPLV 953
Score = 40 (19.1 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 913 MRPAYIPNGLETNGVHYSDMNGER 936
++ + GL+T+ +HYS N E+
Sbjct: 1281 LQSSIFSGGLQTSQIHYS-YNEEK 1303
Score = 39 (18.8 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 61 LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105
LKLA+ S ++P + A+F + R + + + R +DLI
Sbjct: 1620 LKLAAKSFLLPSVQYAMFCGWQRLIPEGIDIGEPLTDCLRDVDLI 1664
Score = 39 (18.8 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 971 ETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEG 1006
E T G D + ++ + G A SSC SE S G
Sbjct: 697 EPTALPGLDTKHIVGIACGPAQSFAWSSC-SEWSIG 731
Score = 38 (18.4 bits), Expect = 7.2e-11, Sum P(4) = 7.2e-11
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 357 YTWGDGTHNA-GLL----GHGTDV-------SHW 378
Y WG TH + GL+ +G D+ SHW
Sbjct: 2600 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 2633
Score = 37 (18.1 bits), Expect = 8.3e-37, Sum P(3) = 8.3e-37
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R LPRL
Sbjct: 3823 CMA--SRVAVALDKRTPLPRL 3841
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 500 (181.1 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 126/358 (35%), Positives = 182/358 (50%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3969 AKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 4028
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GELY+WG+ G LGHG P+ I
Sbjct: 4029 LESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED--GKLGHGNRSPCDRPRVIES- 4085
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V + G H+A IT++G+L+T+G G +G LGHGD ++ P+ VE+L G R I
Sbjct: 4086 LRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVID 4145
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
VACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 4146 VACGSGDA---------QTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 4196
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4197 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4255
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ H T EVYTWG G+LG G + P LV AL+ + + +ACGS ++ A
Sbjct: 4256 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4313
Score = 471 (170.9 bits), Expect = 4.6e-40, P = 4.6e-40
Identities = 115/357 (32%), Positives = 188/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V+ GE + GRLG G+ + P +
Sbjct: 2976 IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQI 3035
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 3036 SALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3092
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A ITS+G+L+++G G +G LGHGD P+ V+ L G R + V
Sbjct: 3093 KTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQV 3152
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3153 ACGSRDA---------QTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3203
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3204 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGA 3262
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +V+ WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3263 LHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3319
Score = 463 (168.0 bits), Expect = 3.4e-39, P = 3.4e-39
Identities = 124/341 (36%), Positives = 180/341 (52%)
Query: 291 GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
G+ AA + + +VF WG +LG G I P E+L+ +V V G AV
Sbjct: 2946 GLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3003
Query: 351 TMAGELYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALITS 407
T G++Y G+ T+ G LG G IP++IS L V V G H +T
Sbjct: 3004 TAEGKVYACGEATN--GRLGLGLSSGTIPIPRQISA-LSNYVVKKVAVHSGGRHAMALTV 3060
Query: 408 TGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
G++F++G+G G LGH R N PR +E+L R +ACG H+AA+
Sbjct: 3061 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT--------- 3111
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGH 525
SSG+L++WG G+ RLGHGD +L+P V L+ + +VACG + T+ LT G
Sbjct: 3112 --SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 3169
Query: 526 VFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
VF+ G +G+LG ++G +P +E +L G+ V +I CGA LT V+TWGKG
Sbjct: 3170 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3228
Query: 585 ANGRLGHG-DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
RLGHG DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3229 DYFRLGHGTDVHVRK-PQMVEGLRGKKIVHVAVGALHCLAV 3268
Score = 446 (162.1 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 131/392 (33%), Positives = 186/392 (47%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 3950 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG-GEQTLFAVTADGKLYATG 4008
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+L+++G+
Sbjct: 4009 YGA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 4066
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + +A G H+A + +SG+L+TWG
Sbjct: 4067 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT-----------ASGELYTWGK 4115
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGHGD E +LKP V AL + VACG + T+ LT V++ G YG+L
Sbjct: 4116 GRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 4175
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4176 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4234
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 4235 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4294
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 4295 ALQGKKINRVACGSAHTLAWSTSKPTNAGKLP 4326
Score = 440 (159.9 bits), Expect = 9.9e-37, P = 9.9e-37
Identities = 108/316 (34%), Positives = 159/316 (50%)
Query: 265 LGTRADVL-LPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGK 321
LG + + +PR + SN V+ + G RHA +T G+VF+WGE G+LGH
Sbjct: 3022 LGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3081
Query: 322 DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPK 381
+ +P L+E+L + + CG H+ A+T +GELY+WG G + G LGHG + + PK
Sbjct: 3082 NCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY--GRLGHGDNTTQLRPK 3139
Query: 382 RISGPLEGLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
+ L G +V V CG T +T G +F++GDG FG LG G + + P+ +E L
Sbjct: 3140 LVK-VLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3198
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 499
+G + CG + A+ + SG ++TWG GD RLGHG KP V
Sbjct: 3199 NGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGTDVHVRKPQMV 3247
Query: 500 PALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGES 558
L VA G + +T +G VF G +GQ GN + P LV+ L G+
Sbjct: 3248 EGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQK 3306
Query: 559 VEEIACGAYHVAVLTS 574
+ +ACG+ H T+
Sbjct: 3307 ITRVACGSSHSVAWTT 3322
Score = 417 (151.9 bits), Expect = 2.9e-34, P = 2.9e-34
Identities = 116/358 (32%), Positives = 179/358 (50%)
Query: 283 LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
L V I C + ++T G V+T +S + P L+ +LT + +
Sbjct: 441 LGVTQIVCSEKGFLILTITGAVYTQNYKS----------TTLAPMLVHALTSRKIMKLAA 490
Query: 343 ---GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS---GPLEGLQVASVT 396
G+ H A+++ GE+++WG G + G LGHG P IS G G QV +
Sbjct: 491 HPDGQ-HYLALSVNGEVFSWGCG--DGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIA 547
Query: 397 CGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
CG ++A IT+ G+L T+G G +G LGHG ++ + P V +L GL+ I VACG
Sbjct: 548 CGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDA-- 605
Query: 457 VVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSL 516
Q+ A +G++++WGDGD +LG G + P V L D + KV CG
Sbjct: 606 -------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQF 658
Query: 517 TVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSR 575
+V LT G V+T G +LG+ + + P L+ D L G+ V +IA G+ H LT
Sbjct: 659 SVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL-DSLQGKRVVDIAVGSTHCLALTEE 717
Query: 576 NEVYTWGKGANGRLGHGDV--EDRKTPALVEALKDRHVKYIACG--SNYSAAICLHKW 629
EV++WG +N +L H D ++K P + L +H+ I+CG ++S + C +W
Sbjct: 718 GEVHSWG--SNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFSWSSC-SEW 772
Score = 400 (145.9 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 99/286 (34%), Positives = 148/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G++Y WGE D + + G R+ PR +ES ++V IA G H+A +T
Sbjct: 4056 GELYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 4105
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
GE++TWG+ GRLGHG +D ++P L+E+L V V CG + T +T ++
Sbjct: 4106 ASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVW 4165
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 4166 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4222
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 4223 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-----------DGEVYTW 4271
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 4272 GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4317
Score = 315 (115.9 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 97/333 (29%), Positives = 155/333 (46%)
Query: 353 AGELYTWGDGTHN-AGLLG--HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTG 409
+G +Y WG HN G LG G V P L +Q+ G +T+ G
Sbjct: 3949 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG---GEQTLFAVTADG 4002
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSG--LRTIAVACGVWHTAAVVEVIVTQSSA 467
+L+ G G G LG G ++VS P +ES+ +R +AV G H A+
Sbjct: 4003 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALS--------- 4053
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
S G+L++WG+ + +LGHG++ P +P + +L +A G + + +T SG ++
Sbjct: 4054 --SEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELY 4111
Query: 528 TMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGA--YHVAVLTSRNEVYTWGKG 584
T G YG+LG+ +++ +L P LVE L G V ++ACG+ LT + V++WG G
Sbjct: 4112 TWGKGRYGRLGHGDSEDQLKPKLVE-ALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDG 4170
Query: 585 ANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI----CLHKW-------VSSA 633
G+LG G + K P +++L V + CGS +S A+ ++ W +
Sbjct: 4171 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4230
Query: 634 EQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCS 666
RQ G K+ G +HC C+
Sbjct: 4231 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4263
Score = 287 (106.1 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 103/347 (29%), Positives = 160/347 (46%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG-D 361
EV WG LG ++ P ++L+ V + C E +T+ G +YT
Sbjct: 414 EVIGWG-----LLGWKPYANVNGPIQCKALSNLGVTQIVCSEKGFLILTITGAVYTQNYK 468
Query: 362 GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV 421
T A +L H S I K + P +G H ++ G++F++G G G
Sbjct: 469 STTLAPMLVHAL-TSRKIMKLAAHP-DGQ----------HYLALSVNGEVFSWGCGDGGR 516
Query: 422 LGHGDRKNVSYPREVESLSGL----RTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
LGHGD + P + SG + + +ACG ++AA+ + + G+L
Sbjct: 517 LGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRL--- 573
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPAL--IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYG 535
G G D+ + T + L ID G + T+ +T +G V++ G YG
Sbjct: 574 GHGSSE-----DQTTPMLVTALKGLKVIDV---ACGSGDAQTLAVTENGQVWSWGDGDYG 625
Query: 536 QLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
+LG +DG K P LVE KL + ++ CG+ LT +VYTWGKG N RLGHG
Sbjct: 626 KLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 684
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
E + P L+++L+ + V IA GS + A+ +H W S+ ++LQ
Sbjct: 685 EHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSN-DKLQ 730
Score = 285 (105.4 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 80/232 (34%), Positives = 113/232 (48%)
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
W T +G ++ +G G LG + V P E+L+ LR + + G AV
Sbjct: 3942 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT- 3999
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC--GHSLT 517
+ GKL+ G G RLG G E PT + ++ KVA G
Sbjct: 4000 ----------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHC 4049
Query: 518 VGLTTSGHVFTMGSTVYGQLGNPNADGKLPC---LVEDKLAGESVEEIACGAYHVAVLTS 574
+ L++ G +++ G G+LG+ N + PC V + L G V +IA G H A +T+
Sbjct: 4050 LALSSEGELYSWGEAEDGKLGHGN---RSPCDRPRVIESLRGVEVVDIAAGGAHSACITA 4106
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
E+YTWGKG GRLGHGD ED+ P LVEAL+ V +ACGS + +CL
Sbjct: 4107 SGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCL 4158
Score = 277 (102.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 81/227 (35%), Positives = 111/227 (48%)
Query: 275 RPLESNVVLD--VHHIACGVRHAALV--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
RP V+L V +ACG R A + T +G VF+WG+ G+LG G + P +E
Sbjct: 3137 RPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIE 3196
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL 390
L V + CG + A+T +G ++TWG G + LGHGTDV P+ + G L G
Sbjct: 3197 RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR--LGHGTDVHVRKPQMVEG-LRGK 3253
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
++ V G H +T TGQ+F +GD G G+G P V+ L G + VACG
Sbjct: 3254 KIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3313
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLF-TWGDG-DKNRLG-HGDKEPRL 494
H+ A V VT + SV LF T D + LG D +P L
Sbjct: 3314 SSHSVAWTTVDVT--TPSVHEPVLFQTARDSLGASYLGVPSDSDPSL 3358
Score = 275 (101.9 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 73/221 (33%), Positives = 110/221 (49%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A G++Y WG+ G + + G D L P+ +E+ V +ACG A
Sbjct: 4106 ASGELYTWGK---------GRYGRLGH-GDSEDQLKPKLVEALQGHRVIDVACGSGDAQT 4155
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 4156 LCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4215
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H T G+++T+G
Sbjct: 4216 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4272
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 4273 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4313
Score = 239 (89.2 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 72/221 (32%), Positives = 103/221 (46%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
++F +G LG + P E+LS L + VA G AV
Sbjct: 2956 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 3004
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVAC--GHSLTVGLTTSGHV 526
+ GK++ G+ RLG G + P + AL +Y KVA G + LT G V
Sbjct: 3005 AEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 3064
Query: 527 FTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
F+ G G+LG+ + P L+E L + + +IACG+ H A +TS E+Y+WG G
Sbjct: 3065 FSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3123
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
GRLGHGD + P LV+ L V +ACGS + + L
Sbjct: 3124 YGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLAL 3164
Score = 188 (71.2 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 49/161 (30%), Positives = 79/161 (49%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG+ + + G+D G + P+ +E LD+ + CG + + +T
Sbjct: 614 GQVWSWGDGDYGKLGRGGSD------GCKT----PKLVEKLQDLDIVKVCCGSQFSVALT 663
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
+ G+V+TWG+ RLGHG + + P LL+SL V + G H A+T GE+++W
Sbjct: 664 KDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSW 723
Query: 360 GDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGP 399
G N L T S+ PK + G L + ++CGP
Sbjct: 724 GS---NDKLQHFDTLFSNKKQPKALPG-LNSKHIVGISCGP 760
Score = 41 (19.5 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 155 SDSSVSLTRDISSPEVSVSLNHPISSPTSFQTEGSISVNSERSHVAS 201
SDS SL + + +V N P + +G+++ SHV S
Sbjct: 3352 SDSDPSLLSNKLNGVNNVKPNRPSLAKILLSLDGNLAKQQALSHVLS 3398
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 496 (179.7 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 126/360 (35%), Positives = 181/360 (50%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3976 AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 4035
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 4036 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 4092
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V + G H+A IT+ G LFT+G G +G LGHGD ++ P+ VE+L G R I
Sbjct: 4093 LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVID 4152
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ACG Q+ +++WGDGD +LG G + P + +L D
Sbjct: 4153 IACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG 4203
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4204 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4262
Query: 566 AYHVAVLTSRN--EVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ H T EVYTWG G+LG G + P LV AL+ + + +ACGS ++ A
Sbjct: 4263 SLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4322
Score = 480 (174.0 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 119/357 (33%), Positives = 188/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V+ GE + GRLG G+ V P +
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 3043
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 3044 TALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3100
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A ITS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 3101 KTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3160
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3161 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGA 3270
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3271 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 472 (171.2 bits), Expect = 7.9e-36, Sum P(3) = 7.9e-36
Identities = 126/343 (36%), Positives = 182/343 (53%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A G+ AA + + +VF WG +LG G I P E+L+ +V V G
Sbjct: 2952 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3009
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALI 405
AVT+ G++Y G+ T+ G LG G IP++I+ L V V G H +
Sbjct: 3010 AVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHAMAL 3066
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G++F++G+G G LGH R N PR +E+L R +ACG H+AA+
Sbjct: 3067 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------- 3119
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTS 523
SSG+L+TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT
Sbjct: 3120 ----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 524 GHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G VF+ G +G+LG ++G +P +E +L G+ V +I CGA LT V+TWG
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWG 3234
Query: 583 KGANGRLGHG-DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
KG RLGHG DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3235 KGDYFRLGHGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 437 (158.9 bits), Expect = 4.9e-32, Sum P(3) = 4.9e-32
Identities = 106/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + SN V+ + G RHA +T G++F+WGE G+LGH + +P L
Sbjct: 3037 VPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRL 3096
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 3153
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 3214 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK 3262
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T +G V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 3263 IVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 3321
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 3322 SSHSVAWTT 3330
Score = 435 (158.2 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 114/322 (35%), Positives = 161/322 (50%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATG 4015
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 4016 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + +A G H+A + ++G LFTWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT-----------AAGDLFTWGK 4122
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGHGD E +LKP V AL Y +ACG + T+ LT V++ G YG+L
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4183 GRGGSDGCKVPMKI-DSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4241
Query: 597 RKTPALVEALKDRHVKYIACGS 618
+ P V+ L+ + V IA GS
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGS 4263
Score = 418 (152.2 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 114/361 (31%), Positives = 175/361 (48%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+V P E L V IAC + +++R G V+T S D + P L
Sbjct: 438 ANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQL 487
Query: 329 LESLTMTSVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS-- 384
++SL ++ + H A++ GE+++WG G + G LGHG V PK IS
Sbjct: 488 VQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKLISAL 545
Query: 385 -GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
G G V + CG ++A IT+ G+L+T+G G +G LGHG ++ + P V L GL+
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I V+CG Q+ A +G++++WGDGD +LG G + P + L
Sbjct: 606 VIDVSCGSGDA---------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
D + KV CG ++ LT G V+T G +LG+ + + P L+E L G+ V ++
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDV 715
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H LT +EV++WG + + PA + L +H+ IACG S
Sbjct: 716 AAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSF 775
Query: 623 A 623
A
Sbjct: 776 A 776
Score = 405 (147.6 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 116/363 (31%), Positives = 174/363 (47%)
Query: 233 PDDCDALGDV----YIWGE-----VICDNVVKA---GADKNVNYLGTRADVLLPRPLES- 279
P C+AL + I GE V D + A GA + GT + V P LES
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESI 4039
Query: 280 -NVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVD 338
+V + + G +H ++ +GEV++WGE G+LGHG +P ++ESL V
Sbjct: 4040 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVV 4099
Query: 339 FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCG 398
+ G H+ +T AG+L+TWG G + G LGHG PK + L+G +V + CG
Sbjct: 4100 DIAAGGAHSACITAAGDLFTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYRVIDIACG 4156
Query: 399 PW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
T +T ++++GDG +G LG G P +++SL+ L + V CG + A
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVA 4216
Query: 457 VVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSL 516
+ + SG ++TWG GD +RLGHG + +P V L +A G
Sbjct: 4217 LTK-----------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Query: 517 TVGLTTSG--HVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYH-VAVL 572
V T G V+T G GQLG+ + + P LV L G+ + +ACG+ H +A
Sbjct: 4266 CVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVA-ALQGKKINRVACGSAHTLAWS 4324
Query: 573 TSR 575
TS+
Sbjct: 4325 TSK 4327
Score = 375 (137.1 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 107/336 (31%), Positives = 168/336 (50%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +G ++ P E L V + C E ++ G +YT +N+ LG
Sbjct: 430 GLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQA---YNSDTLGPQ 486
Query: 373 TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
V + I +++A+ + G + AL ++ G++F++G G G LGHGD +
Sbjct: 487 L-VQSLASRNI------VKIAAHSDGHHYLAL-SANGEVFSWGCGDGGRLGHGDTVPLEE 538
Query: 433 PREVESLSGLRT----IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
P+ + +LSG + + +ACG ++AA+ + G+L+TWG G+ RLGHG
Sbjct: 539 PKLISALSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRLGHG 587
Query: 489 DKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGNPNADG-K 545
E + P V L V+CG + T+ +T +G V++ G YG+LG +DG K
Sbjct: 588 SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 546 LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEA 605
P L+E KL + ++ CG+ LT +VYTWGKG N RLGHG E + P L+E
Sbjct: 648 TPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG 706
Query: 606 LKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
LK + V +A GS + A+ +H W S+ +Q Q
Sbjct: 707 LKGKKVIDVAAGSTHCLALTEDSEVHSWGSN-DQCQ 741
Score = 336 (123.3 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 92/281 (32%), Positives = 139/281 (49%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRA-DVLLPRPLESNVVLDVHHIACGVRHAA 296
A G+V+ WG C + + G V + L + +VV HIACG ++A
Sbjct: 513 ANGEVFSWG---CGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVV----HIACGSTYSA 565
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAG 354
+T +GE++TWG + GRLGHG +D P L+ L V V+CG + T AVT G
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENG 625
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++++WGDG + G LG G PK I L+ L + V CG + +T GQ++T+
Sbjct: 626 QVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTW 682
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
G G LGHG ++V YP+ +E L G + I VA G H A+ E ++
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE-----------DSEV 731
Query: 475 FTWGDGDKNRLGHGD--KEPRLKPTCVPALIDYNFHKVACG 513
+WG D+ + H D + + +P +P L + +ACG
Sbjct: 732 HSWGSNDQCQ--HFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 313 (115.2 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 97/333 (29%), Positives = 156/333 (46%)
Query: 353 AGELYTWGDGTHN-AGLLG--HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTG 409
+G +Y WG HN G LG G V P L +Q+ G +T+ G
Sbjct: 3956 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADG 4009
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSG--LRTIAVACGVWHTAAVVEVIVTQSSA 467
+L+ G G G LG G ++VS P +ES+ ++ +AV G H A+
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS--------- 4060
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
S G++++WG+ + +LGHG++ P +P + +L +A G + + +T +G +F
Sbjct: 4061 --SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLF 4118
Query: 528 TMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGA--YHVAVLTSRNEVYTWGKG 584
T G YG+LG+ +++ +L P LVE L G V +IACG+ LT + V++WG G
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVE-ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177
Query: 585 ANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI----CLHKW-------VSSA 633
G+LG G + K P +++L D V + CGS +S A+ ++ W +
Sbjct: 4178 DYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Query: 634 EQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCS 666
RQ G K+ G +HC C+
Sbjct: 4238 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4270
Score = 296 (109.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 91/287 (31%), Positives = 133/287 (46%)
Query: 170 VSVSLNHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXX 229
V+V+L+ P F E V + + +DN NM V DVF+
Sbjct: 3888 VAVALDKRTPLPRLFLDE----VAKKIRELMADNENMDVLHECHDVFK-REQDEQLVQWM 3942
Query: 230 XXAPDD----CDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDV 285
PDD G +Y WG ++ + G + A V +P P E+ L
Sbjct: 3943 NRRPDDWTLSAGGSGTIYGWGH---NHRGQLGGIEG-------AKVKVPTPCEALATLRP 3992
Query: 286 HHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVD--FVTCG 343
+ G + VT G+++ G +GGRLG G + + P LLES+ + V G
Sbjct: 3993 VQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSG 4052
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
H A++ GE+Y+WG+ G LGHG P+ I L G++V + G H+A
Sbjct: 4053 GKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSA 4109
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
IT+ G LFT+G G +G LGHGD ++ P+ VE+L G R I +ACG
Sbjct: 4110 CITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Score = 277 (102.6 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 80/232 (34%), Positives = 113/232 (48%)
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
W T +G ++ +G G LG + V P E+L+ LR + + G AV
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 4006
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC--GHSLT 517
+ GKL+ G G RLG G E PT + ++ KVA G
Sbjct: 4007 ----------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4056
Query: 518 VGLTTSGHVFTMGSTVYGQLGNPNADGKLPC---LVEDKLAGESVEEIACGAYHVAVLTS 574
+ L++ G V++ G G+LG+ N + PC V + L G V +IA G H A +T+
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITA 4113
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
+++TWGKG GRLGHGD ED+ P LVEAL+ V IACGS + +CL
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 265 (98.3 bits), Expect = 9.6e-14, Sum P(3) = 9.6e-14
Identities = 77/238 (32%), Positives = 112/238 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 3122 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 3171
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHGTDV P+ + G L G ++ V G H +T TGQ++ +GD
Sbjct: 3232 TWGKGDYFR--LGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3288
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 3289 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 3344
Score = 239 (89.2 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 71/221 (32%), Positives = 105/221 (47%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
++F +G LG + P E+LS L + VA G + ++ V V
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3013
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVAC--GHSLTVGLTTSGHV 526
GK++ G+ RLG G + P + AL +Y KVA G + LT G +
Sbjct: 3014 -EGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072
Query: 527 FTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
F+ G G+LG+ + P L+E L + + +IACG+ H A +TS E+YTWG G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
GRLGHGD + P +V+ L V +ACGS + + L
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
Score = 181 (68.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 62/205 (30%), Positives = 91/205 (44%)
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEV--IVTQSSASVSSGKLFT 476
+G++G NVS P + E L+ L + +AC + + TQ+ S + G
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLV 488
Query: 477 WGDGDKNRL---GHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
+N + H D L + + + CG +G H G TV
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWG-----CGDGGRLG-----H----GDTV 534
Query: 534 YGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGD 593
P + KL + K AG+ V IACG+ + A +T+ E+YTWG+G GRLGHG
Sbjct: 535 ------PLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 588
Query: 594 VEDRKTPALVEALKDRHVKYIACGS 618
ED+ P LV LK V ++CGS
Sbjct: 589 SEDQTIPMLVTGLKGLKVIDVSCGS 613
Score = 170 (64.9 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 45/161 (27%), Positives = 74/161 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG+ + + G+D G + P+ +E LD+ + CG + + +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSD------GCKT----PKLIEKLQDLDIVKVRCGSQFSIALT 674
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
+ G+V+TWG+ RLGHG + + P LLE L V V G H A+T E+++W
Sbjct: 675 KDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGP 399
G H + P+ + P L+ + + CGP
Sbjct: 735 GSNDQ----CQHFDTLRITKPEPAALPGLDTKHIVGIACGP 771
Score = 45 (20.9 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 31/134 (23%), Positives = 55/134 (41%)
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLD----LICKDKVEAEVWIAGLKALISS- 125
PG + + + + ++D S S + + LD L+ D + V + LK +S+
Sbjct: 3508 PGAASIIAETMTKTKEDVESQSKVSGPEPQYLDEFTSLLVPD--DTRVMVDLLKLAVSNR 3565
Query: 126 -GQGGRSKIDGWNDG-GLYLEDSRD----LTSNSASDSSV-SLTRDISSPEVSVSLNHPI 178
G+ GR + G G D L D + S + +SS V V +HP
Sbjct: 3566 AGEKGRDVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPY 3625
Query: 179 SSPTSFQTEGSISV 192
+ TS + G++ +
Sbjct: 3626 TDDTS--SSGTVKI 3637
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 433 PREVESLSGLRTI-AVACG--VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
PR SL+ + A+A G +W + +++ T+ S++ ++ DG+ L
Sbjct: 3756 PRLAASLAACAQLSALAAGHRMWALQRLRKLLTTEFGQSININRILGDNDGEARTL 3811
Score = 41 (19.5 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 913 MRPAYIPNGLETNGVHYSDMNGER 936
++ + GL+T+ +HYS N E+
Sbjct: 1338 LKSSIFSGGLQTSQIHYS-YNEEK 1360
Score = 40 (19.1 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 989 GSVGVLANSSCVSESSE---GKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPGV 1045
G+ G SCV S K +P++ ++ +P LS + + +W++Q G+
Sbjct: 1575 GNEGSDLEESCVVPHSPVPIDKRPIPIKSPKDKWQP---LLSTVTGVHKYKWLKQNVQGL 1631
Query: 1046 Y 1046
Y
Sbjct: 1632 Y 1632
Score = 38 (18.4 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 16/67 (23%), Positives = 26/67 (38%)
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GLL----GHGTDV--- 375
+ LL +S + G+ ++ Y WG TH + G++ +G DV
Sbjct: 2627 IHVELLGFPPQSSASHIKIGDKVRVKTSVTTPKYKWGSVTHRSVGVVKAFSANGKDVIVD 2686
Query: 376 ----SHW 378
SHW
Sbjct: 2687 FPQQSHW 2693
Score = 37 (18.1 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R LPRL
Sbjct: 3883 CMA--SRVAVALDKRTPLPRL 3901
Score = 37 (18.1 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 85 EKDYLSFSLIYNNGKRSLDLI 105
+KD ++ + + GK+SL L+
Sbjct: 990 DKDLINTGIYESAGKQSLPLV 1010
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 496 (179.7 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 126/360 (35%), Positives = 181/360 (50%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3976 AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 4035
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 4036 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 4092
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V + G H+A IT+ G LFT+G G +G LGHGD ++ P+ VE+L G R I
Sbjct: 4093 LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVID 4152
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ACG Q+ +++WGDGD +LG G + P + +L D
Sbjct: 4153 IACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG 4203
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4204 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4262
Query: 566 AYHVAVLTSRN--EVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ H T EVYTWG G+LG G + P LV AL+ + + +ACGS ++ A
Sbjct: 4263 SLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4322
Score = 480 (174.0 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 119/357 (33%), Positives = 188/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V+ GE + GRLG G+ V P +
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 3043
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 3044 TALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3100
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A ITS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 3101 KTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3160
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3161 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGA 3270
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3271 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 472 (171.2 bits), Expect = 7.9e-36, Sum P(3) = 7.9e-36
Identities = 126/343 (36%), Positives = 182/343 (53%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A G+ AA + + +VF WG +LG G I P E+L+ +V V G
Sbjct: 2952 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3009
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALI 405
AVT+ G++Y G+ T+ G LG G IP++I+ L V V G H +
Sbjct: 3010 AVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHAMAL 3066
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G++F++G+G G LGH R N PR +E+L R +ACG H+AA+
Sbjct: 3067 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------- 3119
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTS 523
SSG+L+TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT
Sbjct: 3120 ----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 524 GHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G VF+ G +G+LG ++G +P +E +L G+ V +I CGA LT V+TWG
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWG 3234
Query: 583 KGANGRLGHG-DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
KG RLGHG DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3235 KGDYFRLGHGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 437 (158.9 bits), Expect = 4.9e-32, Sum P(3) = 4.9e-32
Identities = 106/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + SN V+ + G RHA +T G++F+WGE G+LGH + +P L
Sbjct: 3037 VPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRL 3096
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 3153
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 3214 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK 3262
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T +G V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 3263 IVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 3321
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 3322 SSHSVAWTT 3330
Score = 435 (158.2 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 114/322 (35%), Positives = 161/322 (50%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATG 4015
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 4016 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + +A G H+A + ++G LFTWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT-----------AAGDLFTWGK 4122
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGHGD E +LKP V AL Y +ACG + T+ LT V++ G YG+L
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4183 GRGGSDGCKVPMKI-DSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4241
Query: 597 RKTPALVEALKDRHVKYIACGS 618
+ P V+ L+ + V IA GS
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGS 4263
Score = 418 (152.2 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 114/361 (31%), Positives = 175/361 (48%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+V P E L V IAC + +++R G V+T S D + P L
Sbjct: 438 ANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQL 487
Query: 329 LESLTMTSVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS-- 384
++SL ++ + H A++ GE+++WG G + G LGHG V PK IS
Sbjct: 488 VQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKLISAL 545
Query: 385 -GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
G G V + CG ++A IT+ G+L+T+G G +G LGHG ++ + P V L GL+
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I V+CG Q+ A +G++++WGDGD +LG G + P + L
Sbjct: 606 VIDVSCGSGDA---------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
D + KV CG ++ LT G V+T G +LG+ + + P L+E L G+ V ++
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDV 715
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H LT +EV++WG + + PA + L +H+ IACG S
Sbjct: 716 AAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSF 775
Query: 623 A 623
A
Sbjct: 776 A 776
Score = 405 (147.6 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 116/363 (31%), Positives = 174/363 (47%)
Query: 233 PDDCDALGDV----YIWGE-----VICDNVVKA---GADKNVNYLGTRADVLLPRPLES- 279
P C+AL + I GE V D + A GA + GT + V P LES
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESI 4039
Query: 280 -NVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVD 338
+V + + G +H ++ +GEV++WGE G+LGHG +P ++ESL V
Sbjct: 4040 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVV 4099
Query: 339 FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCG 398
+ G H+ +T AG+L+TWG G + G LGHG PK + L+G +V + CG
Sbjct: 4100 DIAAGGAHSACITAAGDLFTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYRVIDIACG 4156
Query: 399 PW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
T +T ++++GDG +G LG G P +++SL+ L + V CG + A
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVA 4216
Query: 457 VVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSL 516
+ + SG ++TWG GD +RLGHG + +P V L +A G
Sbjct: 4217 LTK-----------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Query: 517 TVGLTTSG--HVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYH-VAVL 572
V T G V+T G GQLG+ + + P LV L G+ + +ACG+ H +A
Sbjct: 4266 CVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVA-ALQGKKINRVACGSAHTLAWS 4324
Query: 573 TSR 575
TS+
Sbjct: 4325 TSK 4327
Score = 375 (137.1 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 107/336 (31%), Positives = 168/336 (50%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +G ++ P E L V + C E ++ G +YT +N+ LG
Sbjct: 430 GLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQA---YNSDTLGPQ 486
Query: 373 TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
V + I +++A+ + G + AL ++ G++F++G G G LGHGD +
Sbjct: 487 L-VQSLASRNI------VKIAAHSDGHHYLAL-SANGEVFSWGCGDGGRLGHGDTVPLEE 538
Query: 433 PREVESLSGLRT----IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
P+ + +LSG + + +ACG ++AA+ + G+L+TWG G+ RLGHG
Sbjct: 539 PKLISALSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRLGHG 587
Query: 489 DKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGNPNADG-K 545
E + P V L V+CG + T+ +T +G V++ G YG+LG +DG K
Sbjct: 588 SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 546 LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEA 605
P L+E KL + ++ CG+ LT +VYTWGKG N RLGHG E + P L+E
Sbjct: 648 TPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG 706
Query: 606 LKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
LK + V +A GS + A+ +H W S+ +Q Q
Sbjct: 707 LKGKKVIDVAAGSTHCLALTEDSEVHSWGSN-DQCQ 741
Score = 336 (123.3 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 92/281 (32%), Positives = 139/281 (49%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRA-DVLLPRPLESNVVLDVHHIACGVRHAA 296
A G+V+ WG C + + G V + L + +VV HIACG ++A
Sbjct: 513 ANGEVFSWG---CGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVV----HIACGSTYSA 565
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAG 354
+T +GE++TWG + GRLGHG +D P L+ L V V+CG + T AVT G
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENG 625
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++++WGDG + G LG G PK I L+ L + V CG + +T GQ++T+
Sbjct: 626 QVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTW 682
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
G G LGHG ++V YP+ +E L G + I VA G H A+ E ++
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE-----------DSEV 731
Query: 475 FTWGDGDKNRLGHGD--KEPRLKPTCVPALIDYNFHKVACG 513
+WG D+ + H D + + +P +P L + +ACG
Sbjct: 732 HSWGSNDQCQ--HFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 313 (115.2 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 97/333 (29%), Positives = 156/333 (46%)
Query: 353 AGELYTWGDGTHN-AGLLG--HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTG 409
+G +Y WG HN G LG G V P L +Q+ G +T+ G
Sbjct: 3956 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADG 4009
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSG--LRTIAVACGVWHTAAVVEVIVTQSSA 467
+L+ G G G LG G ++VS P +ES+ ++ +AV G H A+
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS--------- 4060
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
S G++++WG+ + +LGHG++ P +P + +L +A G + + +T +G +F
Sbjct: 4061 --SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLF 4118
Query: 528 TMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGA--YHVAVLTSRNEVYTWGKG 584
T G YG+LG+ +++ +L P LVE L G V +IACG+ LT + V++WG G
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVE-ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177
Query: 585 ANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI----CLHKW-------VSSA 633
G+LG G + K P +++L D V + CGS +S A+ ++ W +
Sbjct: 4178 DYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Query: 634 EQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCS 666
RQ G K+ G +HC C+
Sbjct: 4238 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT 4270
Score = 296 (109.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 91/287 (31%), Positives = 133/287 (46%)
Query: 170 VSVSLNHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXX 229
V+V+L+ P F E V + + +DN NM V DVF+
Sbjct: 3888 VAVALDKRTPLPRLFLDE----VAKKIRELMADNENMDVLHECHDVFK-REQDEQLVQWM 3942
Query: 230 XXAPDD----CDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDV 285
PDD G +Y WG ++ + G + A V +P P E+ L
Sbjct: 3943 NRRPDDWTLSAGGSGTIYGWGH---NHRGQLGGIEG-------AKVKVPTPCEALATLRP 3992
Query: 286 HHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVD--FVTCG 343
+ G + VT G+++ G +GGRLG G + + P LLES+ + V G
Sbjct: 3993 VQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSG 4052
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
H A++ GE+Y+WG+ G LGHG P+ I L G++V + G H+A
Sbjct: 4053 GKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSA 4109
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
IT+ G LFT+G G +G LGHGD ++ P+ VE+L G R I +ACG
Sbjct: 4110 CITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Score = 277 (102.6 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 80/232 (34%), Positives = 113/232 (48%)
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
W T +G ++ +G G LG + V P E+L+ LR + + G AV
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 4006
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC--GHSLT 517
+ GKL+ G G RLG G E PT + ++ KVA G
Sbjct: 4007 ----------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4056
Query: 518 VGLTTSGHVFTMGSTVYGQLGNPNADGKLPC---LVEDKLAGESVEEIACGAYHVAVLTS 574
+ L++ G V++ G G+LG+ N + PC V + L G V +IA G H A +T+
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITA 4113
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
+++TWGKG GRLGHGD ED+ P LVEAL+ V IACGS + +CL
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 265 (98.3 bits), Expect = 9.6e-14, Sum P(3) = 9.6e-14
Identities = 77/238 (32%), Positives = 112/238 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 3122 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 3171
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHGTDV P+ + G L G ++ V G H +T TGQ++ +GD
Sbjct: 3232 TWGKGDYFR--LGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3288
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 3289 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 3344
Score = 239 (89.2 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 71/221 (32%), Positives = 105/221 (47%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
++F +G LG + P E+LS L + VA G + ++ V V
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3013
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVAC--GHSLTVGLTTSGHV 526
GK++ G+ RLG G + P + AL +Y KVA G + LT G +
Sbjct: 3014 -EGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072
Query: 527 FTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
F+ G G+LG+ + P L+E L + + +IACG+ H A +TS E+YTWG G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
GRLGHGD + P +V+ L V +ACGS + + L
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
Score = 181 (68.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 62/205 (30%), Positives = 91/205 (44%)
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEV--IVTQSSASVSSGKLFT 476
+G++G NVS P + E L+ L + +AC + + TQ+ S + G
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLV 488
Query: 477 WGDGDKNRL---GHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
+N + H D L + + + CG +G H G TV
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWG-----CGDGGRLG-----H----GDTV 534
Query: 534 YGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGD 593
P + KL + K AG+ V IACG+ + A +T+ E+YTWG+G GRLGHG
Sbjct: 535 ------PLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 588
Query: 594 VEDRKTPALVEALKDRHVKYIACGS 618
ED+ P LV LK V ++CGS
Sbjct: 589 SEDQTIPMLVTGLKGLKVIDVSCGS 613
Score = 170 (64.9 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 45/161 (27%), Positives = 74/161 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG+ + + G+D G + P+ +E LD+ + CG + + +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSD------GCKT----PKLIEKLQDLDIVKVRCGSQFSIALT 674
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
+ G+V+TWG+ RLGHG + + P LLE L V V G H A+T E+++W
Sbjct: 675 KDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGP 399
G H + P+ + P L+ + + CGP
Sbjct: 735 GSNDQ----CQHFDTLRITKPEPAALPGLDTKHIVGIACGP 771
Score = 45 (20.9 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 31/134 (23%), Positives = 55/134 (41%)
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLD----LICKDKVEAEVWIAGLKALISS- 125
PG + + + + ++D S S + + LD L+ D + V + LK +S+
Sbjct: 3508 PGAASIIAETMTKTKEDVESQSKVSGPEPQYLDEFTSLLVPD--DTRVMVDLLKLAVSNR 3565
Query: 126 -GQGGRSKIDGWNDG-GLYLEDSRD----LTSNSASDSSV-SLTRDISSPEVSVSLNHPI 178
G+ GR + G G D L D + S + +SS V V +HP
Sbjct: 3566 AGEKGRDVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPY 3625
Query: 179 SSPTSFQTEGSISV 192
+ TS + G++ +
Sbjct: 3626 TDDTS--SSGTVKI 3637
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 433 PREVESLSGLRTI-AVACG--VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
PR SL+ + A+A G +W + +++ T+ S++ ++ DG+ L
Sbjct: 3756 PRLAASLAACAQLSALAAGHRMWALQRLRKLLTTEFGQSININRILGDNDGEARTL 3811
Score = 41 (19.5 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 913 MRPAYIPNGLETNGVHYSDMNGER 936
++ + GL+T+ +HYS N E+
Sbjct: 1338 LKSSIFSGGLQTSQIHYS-YNEEK 1360
Score = 40 (19.1 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 989 GSVGVLANSSCVSESSE---GKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPGV 1045
G+ G SCV S K +P++ ++ +P LS + + +W++Q G+
Sbjct: 1575 GNEGSDLEESCVVPHSPVPIDKRPIPIKSPKDKWQP---LLSTVTGVHKYKWLKQNVQGL 1631
Query: 1046 Y 1046
Y
Sbjct: 1632 Y 1632
Score = 38 (18.4 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 16/67 (23%), Positives = 26/67 (38%)
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GLL----GHGTDV--- 375
+ LL +S + G+ ++ Y WG TH + G++ +G DV
Sbjct: 2627 IHVELLGFPPQSSASHIKIGDKVRVKTSVTTPKYKWGSVTHRSVGVVKAFSANGKDVIVD 2686
Query: 376 ----SHW 378
SHW
Sbjct: 2687 FPQQSHW 2693
Score = 37 (18.1 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R LPRL
Sbjct: 3883 CMA--SRVAVALDKRTPLPRL 3901
Score = 37 (18.1 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 85 EKDYLSFSLIYNNGKRSLDLI 105
+KD ++ + + GK+SL L+
Sbjct: 990 DKDLINTGIYESAGKQSLPLV 1010
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 515 (186.3 bits), Expect = 4.9e-41, Sum P(3) = 4.9e-41
Identities = 133/391 (34%), Positives = 196/391 (50%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
D ++ G+ CD V GA ++ +V++P S + CG ++
Sbjct: 3988 DWHLGGK--CD-VYLWGAGRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4042
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVT-CG-EFHTCAVTMAGELY 357
G V GE S GRLG G D+ ++ +L VT CG + H+ A+T +GE++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LGHG P++I L+G +V ++CG H+A++TS G+LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+G LG G+ N P V +L G + VACG+ HT AV S ++ +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4209
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVY--- 534
GDGD +LG G+ + P V L KVACG +V LT GHV+T G
Sbjct: 4210 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4269
Query: 535 --GQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
G+ N N ++P L AG +E++A GA H L S +VY WG + G+LG G
Sbjct: 4270 PEGRARNHNRPQQIPVL-----AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Query: 593 DVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ P LV L+ ++V+ I+ G +SAA
Sbjct: 4325 HTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4355
Score = 451 (163.8 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 129/399 (32%), Positives = 190/399 (47%)
Query: 232 APDDCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACG 291
+PD GD I E C+ V + GT+ +L P+ S D I G
Sbjct: 356 SPDSIQT-GDAPIVSET-CEVYVWGSNSSHQLVEGTQEKILQPKLAPS--FSDAQTIEAG 411
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT---SVDFVTCG---EF 345
+++ G V G+ S GRLG G D L+ LT S+ V+ +
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLG---DSNNQSTLKKLTFEPHRSIKKVSSSKGSDG 468
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
HT A T GE+++WGDG + G LGHG + PK I GPL+G V V+ G H+A +
Sbjct: 469 HTLAFTTEGEVFSWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G+L+T+G+G FG LGHGD + + P V+ +S + V+CG HT A+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--VSCGSSHTIAL-------- 576
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
S ++++G GD +LGHGD KP + AL KV G ++ LT++G
Sbjct: 577 --SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQ 634
Query: 526 VFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
V+ G G+ A P L+E+ LA + +I+ G H L+ NEVY WG +
Sbjct: 635 VYAWGCGACLGCGSSEATALRPKLIEE-LAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693
Query: 586 NGRLGHGDVEDRKT-PALVEALKDRHVKYIACGSNYSAA 623
G+ G G+ T P V L ++ I+ G+++S A
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 389 (142.0 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 103/341 (30%), Positives = 171/341 (50%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDG 362
+V+ WG G+L G++++ P S + V CG+ T + G + G+G
Sbjct: 3996 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQAQQ--VICGQNCTFVIQANGTVLACGEG 4052
Query: 363 THNAGLLGHG-TDVSHWIPKRISGPLEGLQVASV--TCGP-WHTALITSTGQLFTFGDGT 418
++ G LG G +D H + + L+G V + +CG H+ +T +G++F++GDG
Sbjct: 4053 SY--GRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4108
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGHG+ PR++E+L G + ++CG H+A +VT S GKLFT+G
Sbjct: 4109 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSA-----VVT------SDGKLFTFG 4157
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH-VFTMGSTVYGQL 537
+GD RLG G+ + P V AL Y +VACG + T+ ++ G V+ G YG+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 538 GNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
G N+ K D L G ++++ACG LT VYT+G+ L G +
Sbjct: 4218 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE 634
P + L ++ +A G+ ++ A+ ++ W S++E
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 4318
Score = 364 (133.2 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 95/289 (32%), Positives = 149/289 (51%)
Query: 289 ACGVR-HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
+CG H+ +T GEVF+WG+ G+LGHG +P +E+L V ++CG H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
VT G+L+T+G+G + G LG G + +P+R++ LEG Q+ V CG HT +++
Sbjct: 4145 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4201
Query: 408 TGQL-FTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G + + FGDG +G LG G+ S P++V+ L G+ VACG + A+ +
Sbjct: 4202 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK------- 4254
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
G ++T+G L G +P +P L VA G T+ L ++G V
Sbjct: 4255 ----DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDV 4310
Query: 527 FTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
+ GS GQLG + + + P LV L G++V +I+ G H A T+
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLVT-VLQGKNVRQISAGRCHSAAWTA 4358
Score = 290 (107.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 83/300 (27%), Positives = 148/300 (49%)
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL 390
S T S D + G+ + T E+Y WG + + L GT PK ++
Sbjct: 351 SRTCASPDSIQTGDAPIVSETC--EVYVWGSNSSHQ--LVEGTQEKILQPK-LAPSFSDA 405
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV--ESLSGLRTIAVA 448
Q ++ G + T +I++ G + G G++G LG GD N S +++ E ++ ++ +
Sbjct: 406 Q--TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 449 CGV-WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
G HT A + G++F+WGDGD +LGHG+ + P + +
Sbjct: 464 KGSDGHTLAFT-----------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 508 HK-VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACG 565
V+ G+ + +T G ++T G +G+LG+ +++ + +P LV+D +V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCG 569
Query: 566 AYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ H L+ V+++G G NG+LGHGD P ++EAL+ ++ + GS S A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 252 (93.8 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 82/253 (32%), Positives = 127/253 (50%)
Query: 381 KRISGPLEGLQVAS-VTCGP--WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVE 437
K I+G E Q+ S T P WH + ++ +G G G L R NV P
Sbjct: 3969 KWINGMDE--QIMSWATSRPEDWH---LGGKCDVYLWGAGRHGQLAEAGR-NVMVPAAAP 4022
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
S S + V CG + V++ ++G + G+G RLG G+ + T
Sbjct: 4023 SFSQAQQ--VICGQ-NCTFVIQ----------ANGTVLACGEGSYGRLGQGNSDDLHVLT 4069
Query: 498 CVPALIDYNFHKV--ACG---HSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVE 551
+ AL + ++ +CG HS+ LT SG VF+ G YG+LG+ N+D + P +E
Sbjct: 4070 VISALQGFVVTQLVTSCGSDGHSMA--LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4127
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
L GE V +++CG H AV+TS +++T+G G GRLG G+ ++K P V AL+ +
Sbjct: 4128 -ALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 612 KYIACGSNYSAAI 624
+ACG N++ A+
Sbjct: 4187 GQVACGLNHTLAV 4199
Score = 154 (59.3 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 257 GADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
G D G V P+ +E+ + + + G + + +T G+V+ WG G LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLG 645
Query: 317 HGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV 375
G + ++P L+E L T + ++ G+ H A++ E+Y WG+ ++ G G G
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN--NSMGQCGQGNST 703
Query: 376 SHWI-PKRISGPLEGLQVASVTCGPWHTALITS 407
PK++SG L+G+ + ++ G H+ T+
Sbjct: 704 GPITKPKKVSG-LDGIAIQQISAGTSHSLAWTA 735
Score = 114 (45.2 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 53/238 (22%), Positives = 86/238 (36%)
Query: 120 KALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSV----SLTRDISSP-EVSVSL 174
K ++ G R DG LY D DS+ +L +DIS+ EVS
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 175 NHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPD 234
+H I+ +T S + + +TN K + +
Sbjct: 571 SHTIALSKDGRTVWSFG-GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA- 628
Query: 235 DCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRH 294
+ G VY WG C + G+ + A L P+ +E + I+ G H
Sbjct: 629 -LTSTGQVYAWG---CGACLGCGSSE--------ATALRPKLIEELAATRIVDISIGDSH 676
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKD-IVQPHLLESLTMTSVDFVTCGEFHTCAVT 351
++ EV+ WG S G+ G G I +P + L ++ ++ G H+ A T
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 42 (19.8 bits), Expect = 4.9e-41, Sum P(3) = 4.9e-41
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 99 KRSLDLICKDKVEAEVWIAGLKALISSGQGGRSK--IDGWNDGGLYLEDSRDLTSNSASD 156
KR+L L ++ +A ++ + L+ GG+ K ID + + ++ + S S
Sbjct: 2579 KRALGLADLERAQAMIYKLVIHGLLEDQFGGKIKQEIDQQAEESDQAQQAQTPVTTSPSA 2638
Query: 157 SSVSLTRDISSPEVSVSLNHPIS 179
SS + SS E + + P++
Sbjct: 2639 SSTTSFMS-SSLEDTTTATTPVT 2660
Score = 40 (19.1 bits), Expect = 8.0e-41, Sum P(3) = 8.0e-41
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 118 GLKALISSGQGGRSKIDGWNDGGL 141
GL AL+S G GG I DG +
Sbjct: 3757 GL-ALVSGGLGGLMNIWSLRDGSV 3779
Score = 38 (18.4 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 96 NNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSAS 155
N GK +D I V A W + SG+ + G DG L L + D+++
Sbjct: 3513 NGGKGLVD-IQPHWVSALAWPEEGPSTAWSGESPELLLVGRMDGSLGLIEVVDVSTMHRR 3571
Query: 156 DSSVSLTRDIS 166
+ +D+S
Sbjct: 3572 ELEHCYRKDVS 3582
Score = 38 (18.4 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 678 NPGKPYRVCD 687
NPG+ ++CD
Sbjct: 2177 NPGEKVKICD 2186
Score = 37 (18.1 bits), Expect = 4.9e-41, Sum P(3) = 4.9e-41
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 13 DIEQALIALKKGAQLLKYGRKGK 35
D E+A + + Q+L +G GK
Sbjct: 2034 DPEKAQCCIVENGQILTHGSGGK 2056
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 510 (184.6 bits), Expect = 5.3e-41, Sum P(3) = 5.3e-41
Identities = 130/389 (33%), Positives = 196/389 (50%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
D ++ G+ CD V GA ++ +V++P S + CG ++
Sbjct: 3990 DWHLGGK--CD-VYLWGAGRHGQLAEAGRNVMVPVAAPS--FSQAQQVVCGQNCTFVIQA 4044
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVT-CG-EFHTCAVTMAGELY 357
G V GE S GRLG G D+ ++ +L VT CG + H+ A+T +GE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LGHG P++I L+G +V ++CG H+A++T+ G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4161
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+G LG G+ N P V +L G + VACG+ HT AV S ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV----------STDGSMVWAF 4211
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
GDGD +LG G+ + P V L KVACG +V LT GHV+T G +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLI 4271
Query: 538 GNPNADGK---LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
G P + P V L+G +E+IA GA H L+S +VY WG + G+LG G
Sbjct: 4272 GLPEGRARNHNRPQQVP-VLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHT 4330
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ P L+ L+ ++++ I+ G +SAA
Sbjct: 4331 NHVREPTLITVLQGKNIRQISAGRCHSAA 4359
Score = 457 (165.9 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
Identities = 147/496 (29%), Positives = 227/496 (45%)
Query: 139 GGL-YLEDSRDLTSN-SASDSSVSLTRDISSPEVSVSLNHPISSPTSFQTE-GSISVNSE 195
G L YL + ++ N SA +++ T+ + SPE +S + +S + GS + S+
Sbjct: 259 GSLRYLLEWIEMALNASAVVNTMEKTKLLQSPEGMISFDCFMSILMQMRRSLGSSADRSQ 318
Query: 196 -RSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPDDCDALGDVYIWGEVICDNVV 254
R + + + + +F +PD GD I E C+ V
Sbjct: 319 WREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT-GDAPIVSET-CEVYV 376
Query: 255 KAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGR 314
+ GT+ +L P+ S D I G +++ G V G+ S GR
Sbjct: 377 WGSNSSHQLVEGTQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGR 434
Query: 315 LGHGVGKDIVQPHLLESLTMT---SVDFVTCG---EFHTCAVTMAGELYTWGDGTHNAGL 368
LG G D L+ LT S+ V+ + HT A T GE+++WGDG + G
Sbjct: 435 LGLG---DSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY--GK 489
Query: 369 LGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK 428
LGHG + PK I GPL+G V V+ G H+A +T G+L+T+G+G FG LGHGD
Sbjct: 490 LGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSN 549
Query: 429 NVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
+ + P V+ +S + V+CG HT A+ S ++++G GD +LGHG
Sbjct: 550 SRNIPTLVKDISNVGE--VSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHG 597
Query: 489 DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC 548
D KP + AL KV G ++ LT++G V+ G G+ A P
Sbjct: 598 DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPK 657
Query: 549 LVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT-PALVEALK 607
L+E+ LA + +I+ G H L+ NEVY WG + G+ G G+ T P V L
Sbjct: 658 LIEE-LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLD 716
Query: 608 DRHVKYIACGSNYSAA 623
++ I+ G+++S A
Sbjct: 717 GVSIQQISAGTSHSLA 732
Score = 362 (132.5 bits), Expect = 5.1e-25, Sum P(3) = 5.1e-25
Identities = 93/291 (31%), Positives = 151/291 (51%)
Query: 289 ACGVR-HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
+CG H+ +T GEVF+WG+ G+LGHG +P +E+L V ++CG H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
VT G+L+T+G+G + G LG G + +P+R++ LEG Q+ V CG HT +++
Sbjct: 4147 AVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST 4203
Query: 408 TGQL-FTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G + + FGDG +G LG G+ S P++V+ L G+ VACG + A+ +
Sbjct: 4204 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTK------- 4256
Query: 467 ASVSSGKLFTWGDGDKNRLG--HGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
G ++T+G +G G +P VP L +A G T+ L+++G
Sbjct: 4257 ----DGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTG 4312
Query: 525 HVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
V+ GS GQLG + + + P L+ L G+++ +I+ G H A T+
Sbjct: 4313 DVYAWGSNSEGQLGLGHTNHVREPTLIT-VLQGKNIRQISAGRCHSAAWTA 4362
Score = 332 (121.9 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 87/275 (31%), Positives = 142/275 (51%)
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++Y WG G H L G +V +P ++ P Q V CG T +I + G +
Sbjct: 3998 DVYLWGAGRHGQ-LAEAGRNVM--VP--VAAPSFS-QAQQVVCGQNCTFVIQANGTVLAC 4051
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSG--LRTIAVACGV-WHTAAVVEVIVTQSSASVSS 471
G+G++G LG G+ ++ + +L G + + +CG H+ A+ E S
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G++F+WGDGD +LGHG+ + + +P + AL +++CG + +T G +FT G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGN 4160
Query: 532 TVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYH-VAVLTSRNEVYTWGKGANGRL 589
YG+LG N K LP V L G + ++ACG H VAV T + V+ +G G G+L
Sbjct: 4161 GDYGRLGLGNTSNKKLPERVT-ALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKL 4219
Query: 590 GHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G G+ + +P V+ L +K +ACG+ +S A+
Sbjct: 4220 GLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4254
Score = 290 (107.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 83/300 (27%), Positives = 148/300 (49%)
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL 390
S T S D + G+ + T E+Y WG + + L GT PK ++
Sbjct: 351 SRTCASPDSIQTGDAPIVSETC--EVYVWGSNSSHQ--LVEGTQEKILQPK-LAPSFSDA 405
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV--ESLSGLRTIAVA 448
Q ++ G + T +I++ G + G G++G LG GD N S +++ E ++ ++ +
Sbjct: 406 Q--TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 449 CGV-WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
G HT A + G++F+WGDGD +LGHG+ + P + +
Sbjct: 464 KGSDGHTLAFT-----------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 508 HK-VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACG 565
V+ G+ + +T G ++T G +G+LG+ +++ + +P LV+D +V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCG 569
Query: 566 AYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ H L+ V+++G G NG+LGHGD P ++EAL+ ++ + GS S A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 249 (92.7 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 81/253 (32%), Positives = 127/253 (50%)
Query: 381 KRISGPLEGLQVAS-VTCGP--WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVE 437
K I+G E Q+ S T P WH + ++ +G G G L R NV P
Sbjct: 3971 KWINGMDE--QIMSWATSRPEDWH---LGGKCDVYLWGAGRHGQLAEAGR-NVMVPVAAP 4024
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
S S + V CG + V++ ++G + G+G RLG G+ + T
Sbjct: 4025 SFSQAQQ--VVCGQ-NCTFVIQ----------ANGTVLACGEGSYGRLGQGNSDDLHVLT 4071
Query: 498 CVPALIDYNFHKV--ACG---HSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVE 551
+ AL + ++ +CG HS+ LT SG VF+ G YG+LG+ N+D + P +E
Sbjct: 4072 VISALQGFVVTQLVTSCGSDGHSMA--LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4129
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
L GE V +++CG H AV+T+ +++T+G G GRLG G+ ++K P V AL+ +
Sbjct: 4130 -ALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 612 KYIACGSNYSAAI 624
+ACG N++ A+
Sbjct: 4189 GQVACGLNHTVAV 4201
Score = 154 (59.3 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 257 GADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
G D G V P+ +E+ + + + G + + +T G+V+ WG G LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLG 645
Query: 317 HGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV 375
G + ++P L+E L T + ++ G+ H A++ E+Y WG+ ++ G G G
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN--NSMGQCGQGNST 703
Query: 376 SHWI-PKRISGPLEGLQVASVTCGPWHTALITS 407
PK++SG L+G+ + ++ G H+ T+
Sbjct: 704 GPITKPKKVSG-LDGVSIQQISAGTSHSLAWTA 735
Score = 118 (46.6 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 54/238 (22%), Positives = 86/238 (36%)
Query: 120 KALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSV----SLTRDISSP-EVSVSL 174
K ++ G R DG LY D DS+ +L +DIS+ EVS
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 175 NHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPD 234
+H I+ +T S + + +TN K + +
Sbjct: 571 SHTIALSKDGRTVWSFG-GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA- 628
Query: 235 DCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRH 294
+ G VY WG C + G+ + A L P+ +E + I+ G H
Sbjct: 629 -LTSTGQVYAWG---CGACLGCGSSE--------ATALRPKLIEELAATRIVDISIGDSH 676
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKD-IVQPHLLESLTMTSVDFVTCGEFHTCAVT 351
++ EV+ WG S G+ G G I +P + L S+ ++ G H+ A T
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWT 734
Score = 47 (21.6 bits), Expect = 5.3e-41, Sum P(3) = 5.3e-41
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 99 KRSLDLICKDKVEAEVWIAGLKALISSGQGGRSK--IDGWNDGGLYLEDSRDLTSNSASD 156
KR+L L ++ +A ++ + L+ GGR K +D + G + ++ + S S
Sbjct: 2581 KRALGLADLERAQAMIYKLVVHGLLEDQFGGRLKQEVDQQVEEGDQSQQAQTPVTTSPSA 2640
Query: 157 SSVSLTRDISSPEVSVSLNHPIS 179
SS + SS E + + P++
Sbjct: 2641 SSTTSFMS-SSLEDTTTATTPVT 2662
Score = 46 (21.3 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 333 TMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP 380
T+T F T G+F TC + M ++G L D + P
Sbjct: 2125 TLTLSSF-TQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYP 2171
Score = 40 (19.1 bits), Expect = 2.8e-40, Sum P(3) = 2.8e-40
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 118 GLKALISSGQGGRSKIDGWNDGGL 141
GL AL+S G GG I DG +
Sbjct: 3759 GL-ALVSGGLGGLMNIWSLRDGSV 3781
Score = 38 (18.4 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 678 NPGKPYRVCD 687
NPG+ ++CD
Sbjct: 2179 NPGEKVKICD 2188
Score = 37 (18.1 bits), Expect = 5.3e-41, Sum P(3) = 5.3e-41
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 13 DIEQALIALKKGAQLLKYGRKGK 35
D E+A + + Q+L +G GK
Sbjct: 2036 DPEKAQCCIVENGQILTHGSGGK 2058
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 491 (177.9 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 126/369 (34%), Positives = 183/369 (49%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3973 AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 4032
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 4033 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 4089
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V V G H+A +T+ G L+T+G G +G LGH D ++ P+ VE+L G R I
Sbjct: 4090 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVID 4149
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 4150 IACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 4200
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4201 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4259
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ H T EVYTWG G+LG G + P LV AL+ + V +ACGS ++ A
Sbjct: 4260 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4319
Query: 626 LHKWVSSAE 634
K S+ +
Sbjct: 4320 TSKPASAGK 4328
Score = 477 (173.0 bits), Expect = 8.7e-37, Sum P(3) = 8.7e-37
Identities = 118/357 (33%), Positives = 189/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V++ GE + GRLG G+ V P +
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 3040
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 3041 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3097
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A +TS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 3098 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3157
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3158 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3268 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 464 (168.4 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 123/333 (36%), Positives = 178/333 (53%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
T + +VF WG +LG G I P E+L+ +V V G AVT+ G++Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Query: 359 WGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALITSTGQLFTFG 415
G+ T+ G LG G IP++I+ L V V G H +T G++F++G
Sbjct: 3017 CGEATN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
+G G LGH R N PR +E+L R +ACG H+AA+ SSG+L+
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT-----------SSGELY 3122
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTV 533
TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT G VF+ G
Sbjct: 3123 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182
Query: 534 YGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
+G+LG ++G +P +E +L G+ V +I CGA LT V+TWGKG RLGHG
Sbjct: 3183 FGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3241
Query: 593 -DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3242 SDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 436 (158.5 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 107/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + S+ V+ + G RHA +T G+VF+WGE G+LGH + +P L
Sbjct: 3034 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3093
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 3150
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 3151 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3210
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 3211 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 3259
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T SG V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 3260 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 3318
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 3319 SSHSVAWTT 3327
Score = 433 (157.5 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 129/392 (32%), Positives = 184/392 (46%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATG 4012
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 4013 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + VA G H+A V ++G L+TWG
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-----------AAGDLYTWGK 4119
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGH D E +LKP V AL + +ACG + T+ LT V++ G YG+L
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4179
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4180 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4238
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 4239 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4298
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 4299 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4330
Score = 422 (153.6 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 112/361 (31%), Positives = 174/361 (48%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+V+ P E L V +AC + +++R G V+T S D++ P L
Sbjct: 438 ANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQL 487
Query: 329 LESLTMTSVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS-- 384
++ L ++ + H A+ GE+Y+WG G + G LGHG V PK IS
Sbjct: 488 VQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAF 545
Query: 385 -GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
G G V + CG ++A IT+ G+L+T+G G +G LGHG ++ + P V L GL+
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I VACG Q+ A +G++++WGDGD +LG G + P + L
Sbjct: 606 VIDVACGSGDA---------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
D + KV CG ++ LT G V++ G +LG+ + + P L+E L G+ V ++
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 715
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H LT +EV++WG + + P + L +H+ IACG S
Sbjct: 716 AAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSF 775
Query: 623 A 623
A
Sbjct: 776 A 776
Score = 393 (143.4 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 97/286 (33%), Positives = 147/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE D + + G R+ PR +ES ++V +A G H+A VT
Sbjct: 4060 GEVYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4109
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
G+++TWG+ GRLGH +D ++P L+E+L V + CG + T +T ++
Sbjct: 4110 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4169
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 4170 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-----------DGEVYTW 4275
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 4276 GDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321
Score = 372 (136.0 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 106/338 (31%), Positives = 168/338 (49%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +G +++ P E L V V C E ++ G +YT +N+ +L
Sbjct: 430 GLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA---YNSDMLA-- 484
Query: 373 TDVSHWIPKRISGPLEG--LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
P+ + G +++A+ + G + AL +TG+++++G G G LGHGD +
Sbjct: 485 -------PQLVQGLASRNIVKIAAHSDGHHYLAL-AATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 431 SYPREVESLSGLRT----IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
P+ + + SG + + +ACG ++AA+ + G+L+TWG G+ RLG
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRLG 585
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGNPNADG 544
HG E P V L VACG + T+ +T +G V++ G YG+LG +DG
Sbjct: 586 HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645
Query: 545 -KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
K P L+E KL V ++ CG+ LT +VY+WGKG N RLGHG E + P L+
Sbjct: 646 CKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 604 EALKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
E L+ + V +A GS + A+ +H W S+ +Q Q
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN-DQCQ 741
Score = 362 (132.5 bits), Expect = 2.9e-26, Sum P(3) = 2.9e-26
Identities = 97/310 (31%), Positives = 148/310 (47%)
Query: 233 PDDCDALGDVYIWGEVIC--DNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIAC 290
P C+ L + + +V C + + V +D+L P+ ++ ++ IA
Sbjct: 443 PIQCEGLASLGVM-QVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAA 501
Query: 291 ---GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS----VDFVTCG 343
G + AL GEV++WG GGRLGHG + +P ++ + + V + CG
Sbjct: 502 HSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW--H 401
++ A+T GELYTWG G N G LGHG+ IP ++G L+GL+V V CG
Sbjct: 561 STYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQ 617
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
T +T GQ++++GDG +G LG G P+ +E L L I V CG + A+ +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK-- 675
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
G++++WG GD RLGHG +E P + L VA G + + LT
Sbjct: 676 ---------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726
Query: 522 TSGHVFTMGS 531
V + GS
Sbjct: 727 EDSEVHSWGS 736
Score = 341 (125.1 bits), Expect = 5.0e-24, Sum P(3) = 5.0e-24
Identities = 93/281 (33%), Positives = 138/281 (49%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRA-DVLLPRPLESNVVLDVHHIACGVRHAA 296
A G+VY WG C + + G V + + +VV HIACG ++A
Sbjct: 513 ATGEVYSWG---CGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV----HIACGSTYSA 565
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAG 354
+T +GE++TWG + GRLGHG +D P L+ L V V CG + T AVT G
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 625
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++++WGDG + G LG G PK I L+ L V V CG + +T GQ++++
Sbjct: 626 QVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSW 682
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
G G LGHG ++V YP+ +E L G + I VA G H A+ E ++
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE-----------DSEV 731
Query: 475 FTWGDGDKNRLGHGD--KEPRLKPTCVPALIDYNFHKVACG 513
+WG D+ + H D + + +PT +P L + +ACG
Sbjct: 732 HSWGSNDQCQ--HFDTLRVTKPEPTALPGLDSKHIVGIACG 770
Score = 282 (104.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 74/221 (33%), Positives = 111/221 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A GD+Y WG+ + G + + L + L L+ + V+D IACG A
Sbjct: 4110 AAGDLYTWGK---GRYGRLGHSDSEDQLKPK----LVEALQGHRVID---IACGSGDAQT 4159
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4219
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H T G+++T+G
Sbjct: 4220 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 257 (95.5 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 75/238 (31%), Positives = 112/238 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 3168
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHG+DV P+ + G L G ++ V G H +T +GQ++ +GD
Sbjct: 3229 TWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 3286 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 3341
Score = 245 (91.3 bits), Expect = 7.6e-11, Sum P(4) = 7.6e-11
Identities = 79/242 (32%), Positives = 112/242 (46%)
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVA 448
G + T G TA I + ++F +G LG + P E+LS L + VA
Sbjct: 2942 GSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2999
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNF 507
G + ++ V V GK+++ G+ RLG G + P + AL Y
Sbjct: 3000 GG---SKSLFAVTV--------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVV 3048
Query: 508 HKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIAC 564
KVA G LT G VF+ G G+LG+ + P L+E L + + +IAC
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIAC 3107
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+ H A LTS E+YTWG G GRLGHGD + P +V+ L V +ACGS + +
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 625 CL 626
L
Sbjct: 3168 AL 3169
Score = 175 (66.7 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
SG ++ WG + +LG G + ++K PT AL ++ G +T G ++
Sbjct: 3953 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 530 GSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIAC--GAYHVAVLTSRNEVYTWGKGAN 586
G G+LG + P L+E + ++++A G H L+S EVY+WG+ +
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+LGHG+ P ++E+L+ V +A G +SA +
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4108
Score = 59 (25.8 bits), Expect = 2.9e-26, Sum P(3) = 2.9e-26
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 573 TSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSS 632
T R +V+ WG +LG K P+ E L +V +A GS A+ + V S
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Score = 49 (22.3 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 30/132 (22%), Positives = 50/132 (37%)
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLD----LICKDKVEAEVWIAGLKALISSG 126
PG + + + + ++D S + +SLD L+ D V + L +G
Sbjct: 3505 PGAASIIAETMTKTKEDVESQNKTSGPEPQSLDEFTSLLIPDDTRVVVELLKLSVCSRAG 3564
Query: 127 QGGRSKIDGWNDG-GLYLEDSRD----LTSNSASDSSV-SLTRDISSPEVSVSLNHPISS 180
GR + G G D L D + S + +SS V V +HP +
Sbjct: 3565 DKGREVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTD 3624
Query: 181 PTSFQTEGSISV 192
TS T G++ +
Sbjct: 3625 DTS--TSGTVKI 3634
Score = 41 (19.5 bits), Expect = 8.7e-37, Sum P(3) = 8.7e-37
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 62 KLASVSKIIPGQRTAV--FQRYLRP-EKDYLSFSLIYNNGKRSLDLI 105
K A K I Q + F R P +KD ++ + ++GK+ L L+
Sbjct: 964 KEAQKEKEIDEQEASASTFHRSRTPLDKDLINTGIYESSGKQCLPLV 1010
Score = 40 (19.1 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 913 MRPAYIPNGLETNGVHYSDMNGER 936
++ + GL+T+ +HYS N E+
Sbjct: 1338 LQSSIFSGGLQTSQIHYS-YNEEK 1360
Score = 40 (19.1 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 971 ETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEG 1006
E T G D + ++ + G A SSC SE S G
Sbjct: 752 EPTALPGLDSKHIVGIACGPAQSFAWSSC-SEWSIG 786
Score = 39 (18.8 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 61 LKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105
LKLA+ S ++P + A+F + R + + + R +DLI
Sbjct: 1677 LKLAAKSFLLPSVQYAMFCGWQRLIPEGIDIGEPLTDCLRDVDLI 1721
Score = 38 (18.4 bits), Expect = 7.6e-11, Sum P(4) = 7.6e-11
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 357 YTWGDGTHNA-GLL----GHGTDV-------SHW 378
Y WG TH + GL+ +G D+ SHW
Sbjct: 2657 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 2690
Score = 37 (18.1 bits), Expect = 8.7e-37, Sum P(3) = 8.7e-37
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R LPRL
Sbjct: 3880 CMA--SRVAVALDKRTPLPRL 3898
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 515 (186.3 bits), Expect = 6.3e-41, Sum P(3) = 6.3e-41
Identities = 133/391 (34%), Positives = 196/391 (50%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
D ++ G+ CD V GA ++ +V++P S + CG ++
Sbjct: 3985 DWHLGGK--CD-VYLWGAGRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4039
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVT-CG-EFHTCAVTMAGELY 357
G V GE S GRLG G D+ ++ +L VT CG + H+ A+T +GE++
Sbjct: 4040 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4099
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LGHG P++I L+G +V ++CG H+A++TS G+LFTFG+G
Sbjct: 4100 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4156
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+G LG G+ N P V +L G + VACG+ HT AV S ++ +
Sbjct: 4157 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4206
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVY--- 534
GDGD +LG G+ + P V L KVACG +V LT GHV+T G
Sbjct: 4207 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4266
Query: 535 --GQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
G+ N N ++P L AG +E++A GA H L S +VY WG + G+LG G
Sbjct: 4267 PEGRARNHNRPQQIPVL-----AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4321
Query: 593 DVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ P LV L+ ++V+ I+ G +SAA
Sbjct: 4322 HTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4352
Score = 451 (163.8 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 129/399 (32%), Positives = 190/399 (47%)
Query: 232 APDDCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACG 291
+PD GD I E C+ V + GT+ +L P+ S D I G
Sbjct: 356 SPDSIQT-GDTPIVSET-CEVYVWGSNSSHQLVEGTQEKILQPKLAPS--FSDAQTIEAG 411
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT---SVDFVTCG---EF 345
+++ G V G+ S GRLG G D L+ LT S+ V+ +
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLG---DSNNQSTLKKLTFEPHRSIKKVSSSKGSDG 468
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
HT A T GE+++WGDG + G LGHG + PK I GPL+G V V+ G H+A +
Sbjct: 469 HTLAFTTEGEVFSWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G+L+T+G+G FG LGHGD + + P V+ +S + V+CG HT A+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--VSCGSSHTIAL-------- 576
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
S ++++G GD +LGHGD KP + AL KV G ++ LT++G
Sbjct: 577 --SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQ 634
Query: 526 VFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
V+ G G+ A P L+E+ LA + +I+ G H L+ NEVY WG +
Sbjct: 635 VYAWGCGACLGCGSSEATALRPKLIEE-LAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693
Query: 586 NGRLGHGDVEDRKT-PALVEALKDRHVKYIACGSNYSAA 623
G+ G G+ T P V L ++ I+ G+++S A
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 389 (142.0 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 103/341 (30%), Positives = 171/341 (50%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDG 362
+V+ WG G+L G++++ P S + V CG+ T + G + G+G
Sbjct: 3993 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQAQQ--VICGQNCTFVIQANGTVLACGEG 4049
Query: 363 THNAGLLGHG-TDVSHWIPKRISGPLEGLQVASV--TCGP-WHTALITSTGQLFTFGDGT 418
++ G LG G +D H + + L+G V + +CG H+ +T +G++F++GDG
Sbjct: 4050 SY--GRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4105
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGHG+ PR++E+L G + ++CG H+A +VT S GKLFT+G
Sbjct: 4106 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSA-----VVT------SDGKLFTFG 4154
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH-VFTMGSTVYGQL 537
+GD RLG G+ + P V AL Y +VACG + T+ ++ G V+ G YG+L
Sbjct: 4155 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 538 GNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
G N+ K D L G ++++ACG LT VYT+G+ L G +
Sbjct: 4215 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE 634
P + L ++ +A G+ ++ A+ ++ W S++E
Sbjct: 4275 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 4315
Score = 364 (133.2 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 95/289 (32%), Positives = 149/289 (51%)
Query: 289 ACGVR-HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
+CG H+ +T GEVF+WG+ G+LGHG +P +E+L V ++CG H+
Sbjct: 4082 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4141
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
VT G+L+T+G+G + G LG G + +P+R++ LEG Q+ V CG HT +++
Sbjct: 4142 AVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA 4198
Query: 408 TGQL-FTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G + + FGDG +G LG G+ S P++V+ L G+ VACG + A+ +
Sbjct: 4199 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK------- 4251
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
G ++T+G L G +P +P L VA G T+ L ++G V
Sbjct: 4252 ----DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDV 4307
Query: 527 FTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
+ GS GQLG + + + P LV L G++V +I+ G H A T+
Sbjct: 4308 YAWGSNSEGQLGLGHTNHVREPTLVT-VLQGKNVRQISAGRCHSAAWTA 4355
Score = 294 (108.6 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 84/300 (28%), Positives = 149/300 (49%)
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL 390
S T S D + G+ T V+ E+Y WG + + L GT PK ++
Sbjct: 351 SRTCASPDSIQTGD--TPIVSETCEVYVWGSNSSHQ--LVEGTQEKILQPK-LAPSFSDA 405
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV--ESLSGLRTIAVA 448
Q ++ G + T +I++ G + G G++G LG GD N S +++ E ++ ++ +
Sbjct: 406 Q--TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 449 CGV-WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
G HT A + G++F+WGDGD +LGHG+ + P + +
Sbjct: 464 KGSDGHTLAFT-----------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 508 HK-VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACG 565
V+ G+ + +T G ++T G +G+LG+ +++ + +P LV+D +V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCG 569
Query: 566 AYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ H L+ V+++G G NG+LGHGD P ++EAL+ ++ + GS S A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 252 (93.8 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 82/253 (32%), Positives = 127/253 (50%)
Query: 381 KRISGPLEGLQVAS-VTCGP--WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVE 437
K I+G E Q+ S T P WH + ++ +G G G L R NV P
Sbjct: 3966 KWINGMDE--QIMSWATSRPEDWH---LGGKCDVYLWGAGRHGQLAEAGR-NVMVPAAAP 4019
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
S S + V CG + V++ ++G + G+G RLG G+ + T
Sbjct: 4020 SFSQAQQ--VICGQ-NCTFVIQ----------ANGTVLACGEGSYGRLGQGNSDDLHVLT 4066
Query: 498 CVPALIDYNFHKV--ACG---HSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVE 551
+ AL + ++ +CG HS+ LT SG VF+ G YG+LG+ N+D + P +E
Sbjct: 4067 VISALQGFVVTQLVTSCGSDGHSMA--LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4124
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
L GE V +++CG H AV+TS +++T+G G GRLG G+ ++K P V AL+ +
Sbjct: 4125 -ALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4183
Query: 612 KYIACGSNYSAAI 624
+ACG N++ A+
Sbjct: 4184 GQVACGLNHTLAV 4196
Score = 154 (59.3 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 257 GADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
G D G V P+ +E+ + + + G + + +T G+V+ WG G LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLG 645
Query: 317 HGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV 375
G + ++P L+E L T + ++ G+ H A++ E+Y WG+ ++ G G G
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN--NSMGQCGQGNST 703
Query: 376 SHWI-PKRISGPLEGLQVASVTCGPWHTALITS 407
PK++SG L+G+ + ++ G H+ T+
Sbjct: 704 GPITKPKKVSG-LDGIAIQQISAGTSHSLAWTA 735
Score = 114 (45.2 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 53/238 (22%), Positives = 86/238 (36%)
Query: 120 KALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSV----SLTRDISSP-EVSVSL 174
K ++ G R DG LY D DS+ +L +DIS+ EVS
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 175 NHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPD 234
+H I+ +T S + + +TN K + +
Sbjct: 571 SHTIALSKDGRTVWSFG-GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA- 628
Query: 235 DCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRH 294
+ G VY WG C + G+ + A L P+ +E + I+ G H
Sbjct: 629 -LTSTGQVYAWG---CGACLGCGSSE--------ATALRPKLIEELAATRIVDISIGDSH 676
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKD-IVQPHLLESLTMTSVDFVTCGEFHTCAVT 351
++ EV+ WG S G+ G G I +P + L ++ ++ G H+ A T
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 41 (19.5 bits), Expect = 6.3e-41, Sum P(3) = 6.3e-41
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 99 KRSLDLICKDKVEAEVWIAGLKALISSGQGGRSK--IDGWNDGGLYLEDSRDLTSNSASD 156
KR+L L ++ +A ++ + L+ GG+ K ID + + ++ + S S
Sbjct: 2576 KRALGLADLERAQAMIYKLVVHGLLEDQFGGKIKQEIDQQAEESDQAQQAQTPVTTSPSA 2635
Query: 157 SSVSLTRDISSPEVSVSLNHPIS 179
SS + SS E + + P++
Sbjct: 2636 SSTTSFMS-SSLEDTTTATTPVT 2657
Score = 40 (19.1 bits), Expect = 7.9e-41, Sum P(3) = 7.9e-41
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 118 GLKALISSGQGGRSKIDGWNDGGL 141
GL AL+S G GG I DG +
Sbjct: 3754 GL-ALVSGGLGGLMNIWSLRDGSV 3776
Score = 38 (18.4 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 96 NNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSAS 155
N GK +D I V A W + SG+ + G DG L L + D+++
Sbjct: 3510 NGGKGLVD-IQPHWVSALAWPEEGPSTAWSGESPELLLVGRMDGSLGLIEVVDVSTMHRR 3568
Query: 156 DSSVSLTRDIS 166
+ +D+S
Sbjct: 3569 ELEHCYRKDVS 3579
Score = 38 (18.4 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 678 NPGKPYRVCD 687
NPG+ ++CD
Sbjct: 2176 NPGEKVKICD 2185
Score = 37 (18.1 bits), Expect = 6.3e-41, Sum P(3) = 6.3e-41
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 13 DIEQALIALKKGAQLLKYGRKGK 35
D E+A + + Q+L +G GK
Sbjct: 2033 DPEKAQCCIVENGQILTHGSGGK 2055
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 491 (177.9 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 126/369 (34%), Positives = 183/369 (49%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3974 AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 4033
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 4034 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 4090
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V V G H+A +T+ G L+T+G G +G LGH D ++ P+ VE+L G R +
Sbjct: 4091 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD 4150
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
VACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 4151 VACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 4201
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4202 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4260
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ H T EVYTWG G+LG G + P LV AL+ + V +ACGS ++ A
Sbjct: 4261 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4320
Query: 626 LHKWVSSAE 634
K S+ +
Sbjct: 4321 TSKPASAGK 4329
Score = 476 (172.6 bits), Expect = 6.9e-37, Sum P(3) = 6.9e-37
Identities = 118/357 (33%), Positives = 188/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V+ GE + GRLG G+ V P +
Sbjct: 2981 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQI 3040
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 3041 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3097
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A +TS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 3098 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3157
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3158 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3268 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 470 (170.5 bits), Expect = 3.1e-36, Sum P(3) = 3.1e-36
Identities = 126/343 (36%), Positives = 182/343 (53%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A G+ AA + + +VF WG +LG G I P E+L+ +V V G
Sbjct: 2949 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3006
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALI 405
AVT+ G++Y G+ T+ G LG G IP++I+ L V V G H +
Sbjct: 3007 AVTVEGKVYACGEATN--GRLGLGLSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 3063
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G++F++G+G G LGH R N PR +E+L R +ACG H+AA+
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------- 3116
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTS 523
SSG+L+TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT
Sbjct: 3117 ----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 524 GHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G VF+ G +G+LG ++G +P +E +L G+ V +I CGA LT V+TWG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWG 3231
Query: 583 KGANGRLGHG-DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
KG RLGHG DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3232 KGDYFRLGHGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 434 (157.8 bits), Expect = 2.6e-34, Sum P(2) = 2.6e-34
Identities = 130/392 (33%), Positives = 184/392 (46%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATG 4013
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 4014 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + VA G H+A V ++G L+TWG
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-----------AAGDLYTWGK 4120
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGH D E +LKP V AL + VACG + T+ LT V++ G YG+L
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4180
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4181 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4239
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 4240 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4299
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 4300 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4331
Score = 433 (157.5 bits), Expect = 3.1e-32, Sum P(3) = 3.1e-32
Identities = 106/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + S+ V+ + G RHA +T G+VF+WGE G+LGH + +P L
Sbjct: 3034 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3093
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 3150
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 3151 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3210
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 3211 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 3259
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T +G V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 3260 IVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 3318
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 3319 SSHSVAWTT 3327
Score = 423 (154.0 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 114/361 (31%), Positives = 174/361 (48%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+V+ P E L V IAC + +++R G V+T S D + P L
Sbjct: 438 ANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQL 487
Query: 329 LESLTMTSVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS-- 384
++ L ++ + H A+ GE+Y+WG G + G LGHG V PK IS
Sbjct: 488 VQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAF 545
Query: 385 -GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
G G V + CG ++A IT+ G+L+T+G G +G LGHG ++ + P V L GL+
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I VACG Q+ A +G++++WGDGD +LG G + P + L
Sbjct: 606 VIDVACGSGDA---------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
D + KV CG ++ LT G V++ G +LG+ + + P L+E L G+ V ++
Sbjct: 657 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 715
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H LT +EV++WG + + PA + L +H+ IACG S
Sbjct: 716 AAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSF 775
Query: 623 A 623
A
Sbjct: 776 A 776
Score = 394 (143.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 98/286 (34%), Positives = 147/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE D + + G R+ PR +ES ++V +A G H+A VT
Sbjct: 4061 GEVYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4110
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
G+++TWG+ GRLGH +D ++P L+E+L V V CG + T +T ++
Sbjct: 4111 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4170
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 4171 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-----------DGEVYTW 4276
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 4277 GDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322
Score = 370 (135.3 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 105/338 (31%), Positives = 167/338 (49%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +G +++ P E L V + C E ++ G +YT +N+ L
Sbjct: 430 GLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA---YNSDTLA-- 484
Query: 373 TDVSHWIPKRISGPLEG--LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
P+ + G +++A+ + G + AL +TG+++++G G G LGHGD +
Sbjct: 485 -------PQLVQGLASRNIVKIAAHSDGHHYLAL-AATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 431 SYPREVESLSGLRT----IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
P+ + + SG + + +ACG ++AA+ + G+L+TWG G+ RLG
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRLG 585
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGNPNADG 544
HG E P V L VACG + T+ +T +G V++ G YG+LG +DG
Sbjct: 586 HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645
Query: 545 -KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
K P L+E KL V ++ CG+ LT +VY+WGKG N RLGHG E + P L+
Sbjct: 646 CKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 604 EALKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
E L+ + V +A GS + A+ +H W S+ +Q Q
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN-DQCQ 741
Score = 359 (131.4 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 95/310 (30%), Positives = 148/310 (47%)
Query: 233 PDDCDALGDVYIWGEVIC--DNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIAC 290
P C+ L ++ + ++ C + + V +D L P+ ++ ++ IA
Sbjct: 443 PIQCEGLANLGVT-QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAA 501
Query: 291 ---GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS----VDFVTCG 343
G + AL GEV++WG GGRLGHG + +P ++ + + V + CG
Sbjct: 502 HSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW--H 401
++ A+T GELYTWG G N G LGHG+ IP ++G L+GL+V V CG
Sbjct: 561 STYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQ 617
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
T +T GQ++++GDG +G LG G P+ +E L L + V CG + A+ +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK-- 675
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
G++++WG GD RLGHG +E P + L VA G + + LT
Sbjct: 676 ---------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726
Query: 522 TSGHVFTMGS 531
V + GS
Sbjct: 727 EDSEVHSWGS 736
Score = 336 (123.3 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 92/281 (32%), Positives = 137/281 (48%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRA-DVLLPRPLESNVVLDVHHIACGVRHAA 296
A G+VY WG C + + G V + + +VV HIACG ++A
Sbjct: 513 ATGEVYSWG---CGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV----HIACGSTYSA 565
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAG 354
+T +GE++TWG + GRLGHG +D P L+ L V V CG + T AVT G
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 625
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++++WGDG + G LG G PK I L+ L V V CG + +T GQ++++
Sbjct: 626 QVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSW 682
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
G G LGHG ++V YP+ +E L G + I VA G H A+ E ++
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE-----------DSEV 731
Query: 475 FTWGDGDKNRLGHGD--KEPRLKPTCVPALIDYNFHKVACG 513
+WG D+ + H D + + +P +P L + +ACG
Sbjct: 732 HSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 281 (104.0 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 74/221 (33%), Positives = 111/221 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A GD+Y WG+ + G + + L + L L+ + V+DV ACG A
Sbjct: 4111 AAGDLYTWGK---GRYGRLGHSDSEDQLKPK----LVEALQGHRVVDV---ACGSGDAQT 4160
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4220
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H T G+++T+G
Sbjct: 4221 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 255 (94.8 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 74/238 (31%), Positives = 111/238 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 3168
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHG+DV P+ + G L G ++ V G H +T GQ++ +GD
Sbjct: 3229 TWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A + V ++ SV LF
Sbjct: 3286 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTIDV--ATPSVHEPVLF 3341
Score = 239 (89.2 bits), Expect = 2.5e-10, Sum P(4) = 2.5e-10
Identities = 73/221 (33%), Positives = 103/221 (46%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
++F +G LG + P E+LS L + VA G + ++ V V
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3010
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVAC--GHSLTVGLTTSGHV 526
GK++ G+ RLG G + P + AL Y KVA G LT G V
Sbjct: 3011 -EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 527 FTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
F+ G G+LG+ + P L+E L + + +IACG+ H A LTS E+YTWG G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
GRLGHGD + P +V+ L V +ACGS + + L
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
Score = 175 (66.7 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
SG ++ WG + +LG G + ++K PT AL ++ G +T G ++
Sbjct: 3954 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 530 GSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIAC--GAYHVAVLTSRNEVYTWGKGAN 586
G G+LG + P L+E + ++++A G H L+S EVY+WG+ +
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+LGHG+ P ++E+L+ V +A G +SA +
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4109
Score = 44 (20.5 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 29/132 (21%), Positives = 50/132 (37%)
Query: 71 PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLD----LICKDKVEAEVWIAGLKALISSG 126
PG + + + + ++D S + +SLD L+ D V + L +G
Sbjct: 3506 PGAASIIAETMTKTKEDVESQNKASGPEPQSLDEFTSLLVADDTRVMVDLLKLSVCSRAG 3565
Query: 127 QGGRSKIDGWNDG-GLYLEDSRD----LTSNSASDSSV-SLTRDISSPEVSVSLNHPISS 180
GR + G G D L D + S + +SS V V +HP +
Sbjct: 3566 DRGREVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTD 3625
Query: 181 PTSFQTEGSISV 192
TS + G++ +
Sbjct: 3626 DTS--SSGTVKI 3635
Score = 43 (20.2 bits), Expect = 6.9e-37, Sum P(3) = 6.9e-37
Identities = 35/123 (28%), Positives = 52/123 (42%)
Query: 62 KLASVSKIIPGQRTAV--FQRYLRP-EKDYLSFSLIYNNGKRSLDLI--CKDKVE--AEV 114
K A K I Q + F R P +KD ++ + ++GK+ L L+ + + A
Sbjct: 964 KEAQKEKEIDEQEASASTFHRSRTPLDKDLINTGIYESSGKQCLPLVQLIQQLLRNIASQ 1023
Query: 115 WIAGLKAL---ISS----GQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISS 167
+A LK + ISS Q R + + L L R L S S+ T DISS
Sbjct: 1024 TVARLKDVARRISSCLDFEQHSRERTASLD---LLLRFQRLLISKLYPGESIGQTSDISS 1080
Query: 168 PEV 170
E+
Sbjct: 1081 HEL 1083
Score = 40 (19.1 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 913 MRPAYIPNGLETNGVHYSDMNGER 936
++ + GL+T+ +HYS N E+
Sbjct: 1338 LQSSIFSGGLQTSQIHYS-YNEEK 1360
Score = 37 (18.1 bits), Expect = 6.9e-37, Sum P(3) = 6.9e-37
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R LPRL
Sbjct: 3881 CMA--SRVAVALDKRTPLPRL 3899
Score = 37 (18.1 bits), Expect = 2.5e-10, Sum P(4) = 2.5e-10
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 357 YTWGDGTHNA-GLL----GHGTDV-------SHW 378
Y WG TH + G++ +G DV SHW
Sbjct: 2657 YKWGSVTHQSVGIVKAFSANGKDVIVDFPQQSHW 2690
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 484 (175.4 bits), Expect = 3.9e-40, Sum P(2) = 3.9e-40
Identities = 125/369 (33%), Positives = 182/369 (49%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3894 AKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTL 3953
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 3954 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 4010
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G +V V G H+A +T+ G L+T+G G +G LGH D ++ P+ VE+L G R +
Sbjct: 4011 LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD 4070
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
VACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 4071 VACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 4121
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4122 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4180
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ H + EVYTWG G+LG G + P LV AL+ + V +ACGS ++ A
Sbjct: 4181 SLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4240
Query: 626 LHKWVSSAE 634
K S+ +
Sbjct: 4241 TSKPASAGK 4249
Score = 478 (173.3 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 118/357 (33%), Positives = 188/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V+ GE + GRLG G+ V P +
Sbjct: 2901 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 2960
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 2961 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3017
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A +TS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 3018 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3077
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3078 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3128
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3129 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3187
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3188 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3244
Score = 470 (170.5 bits), Expect = 2.7e-37, Sum P(3) = 2.7e-37
Identities = 126/343 (36%), Positives = 182/343 (53%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A G+ AA + + +VF WG +LG G I P E+L+ +V V G
Sbjct: 2869 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 2926
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALI 405
AVT+ G++Y G+ T+ G LG G IP++I+ L V V G H +
Sbjct: 2927 AVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 2983
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G++F++G+G G LGH R N PR +E+L R +ACG H+AA+
Sbjct: 2984 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------- 3036
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTS 523
SSG+L+TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT
Sbjct: 3037 ----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3092
Query: 524 GHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G VF+ G +G+LG ++G +P +E +L G+ V +I CGA LT V+TWG
Sbjct: 3093 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWG 3151
Query: 583 KGANGRLGHG-DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
KG RLGHG DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3152 KGDYFRLGHGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3193
Score = 433 (157.5 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 106/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + S+ V+ + G RHA +T G+VF+WGE G+LGH + +P L
Sbjct: 2954 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3013
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 3014 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 3070
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 3071 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3130
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 3131 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 3179
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T +G V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 3180 IVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 3238
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 3239 SSHSVAWTT 3247
Score = 426 (155.0 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 129/392 (32%), Positives = 182/392 (46%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L + V + GE AVT G+LY G
Sbjct: 3875 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIG-GEQTLFAVTADGKLYATG 3933
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 3934 YGA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3991
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G + VA G H+A V ++G L+TWG
Sbjct: 3992 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT-----------AAGDLYTWGK 4040
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGH D E +LKP V AL + VACG + T+ LT V++ G YG+L
Sbjct: 4041 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4100
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4101 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4159
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 4160 VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4219
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 4220 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4251
Score = 421 (153.3 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 114/361 (31%), Positives = 174/361 (48%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+V+ P E L V IAC + +++R G V+T S D + P L
Sbjct: 348 ANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQL 397
Query: 329 LESLTMTSVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS-- 384
++ L ++ + H A+ GE+Y+WG G + G LGHG V PK IS
Sbjct: 398 VQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAF 455
Query: 385 -GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
G G V + CG ++A IT+ G+L+T+G G +G LGHG ++ + P V L GL+
Sbjct: 456 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 515
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I VACG Q+ A +G++++WGDGD +LG G + P + L
Sbjct: 516 VIDVACGSGDA---------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 566
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
D + KV CG +V LT G V++ G +LG+ + + P L+E L G+ V ++
Sbjct: 567 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 625
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H LT +EV++WG + + P+ + L +H+ IACG S
Sbjct: 626 AAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 685
Query: 623 A 623
A
Sbjct: 686 A 686
Score = 389 (142.0 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 98/286 (34%), Positives = 146/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE D + + G R+ PR +ES +V +A G H+A VT
Sbjct: 3981 GEVYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4030
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
G+++TWG+ GRLGH +D ++P L+E+L V V CG + T +T ++
Sbjct: 4031 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4090
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 4091 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4147
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 4148 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE-----------DGEVYTW 4196
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 4197 GDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4242
Score = 371 (135.7 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 105/338 (31%), Positives = 167/338 (49%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +G +++ P E L V + C E ++ G +YT +N+ L
Sbjct: 340 GLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA---YNSDTLA-- 394
Query: 373 TDVSHWIPKRISGPLEG--LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
P+ + G +++A+ + G + AL +TG+++++G G G LGHGD +
Sbjct: 395 -------PQLVQGLASRNIVKIAAHSDGHHYLAL-AATGEVYSWGCGDGGRLGHGDTVPL 446
Query: 431 SYPREVESLSGLRT----IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
P+ + + SG + + +ACG ++AA+ + G+L+TWG G+ RLG
Sbjct: 447 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRLG 495
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGNPNADG 544
HG E P V L VACG + T+ +T +G V++ G YG+LG +DG
Sbjct: 496 HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 555
Query: 545 -KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
K P L+E KL V ++ CG+ LT +VY+WGKG N RLGHG E + P L+
Sbjct: 556 CKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 614
Query: 604 EALKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
E L+ + V +A GS + A+ +H W S+ +Q Q
Sbjct: 615 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN-DQCQ 651
Score = 360 (131.8 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 95/310 (30%), Positives = 148/310 (47%)
Query: 233 PDDCDALGDVYIWGEVIC--DNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIAC 290
P C+ L ++ + ++ C + + V +D L P+ ++ ++ IA
Sbjct: 353 PIQCEGLANLGVT-QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAA 411
Query: 291 ---GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS----VDFVTCG 343
G + AL GEV++WG GGRLGHG + +P ++ + + V + CG
Sbjct: 412 HSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 470
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW--H 401
++ A+T GELYTWG G N G LGHG+ IP ++G L+GL+V V CG
Sbjct: 471 STYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQ 527
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
T +T GQ++++GDG +G LG G P+ +E L L + V CG + A+ +
Sbjct: 528 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK-- 585
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
G++++WG GD RLGHG +E P + L VA G + + LT
Sbjct: 586 ---------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 636
Query: 522 TSGHVFTMGS 531
V + GS
Sbjct: 637 EDSEVHSWGS 646
Score = 338 (124.0 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 92/281 (32%), Positives = 138/281 (49%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRA-DVLLPRPLESNVVLDVHHIACGVRHAA 296
A G+VY WG C + + G V + + +VV HIACG ++A
Sbjct: 423 ATGEVYSWG---CGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV----HIACGSTYSA 475
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAG 354
+T +GE++TWG + GRLGHG +D P L+ L V V CG + T AVT G
Sbjct: 476 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 535
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++++WGDG + G LG G PK I L+ L V V CG + +T GQ++++
Sbjct: 536 QVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSW 592
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
G G LGHG ++V YP+ +E L G + I VA G H A+ E ++
Sbjct: 593 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE-----------DSEV 641
Query: 475 FTWGDGDKNRLGHGD--KEPRLKPTCVPALIDYNFHKVACG 513
+WG D+ + H D + + +P+ +P L + +ACG
Sbjct: 642 HSWGSNDQCQ--HFDTLRVTKPEPSALPGLDTKHIVGIACG 680
Score = 277 (102.6 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 73/221 (33%), Positives = 111/221 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A GD+Y WG+ + G + + L + L L+ + V+DV ACG A
Sbjct: 4031 AAGDLYTWGK---GRYGRLGHSDSEDQLKPK----LVEALQGHRVVDV---ACGSGDAQT 4080
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 4081 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4140
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H + G+++T+G
Sbjct: 4141 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG 4197
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 4198 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4238
Score = 256 (95.2 bits), Expect = 3.1e-28, Sum P(3) = 3.1e-28
Identities = 75/238 (31%), Positives = 111/238 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 3039 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 3088
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 3089 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3148
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHG+DV P+ + G L G ++ V G H +T GQ++ +GD
Sbjct: 3149 TWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3205
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 3206 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 3261
Score = 240 (89.5 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 73/221 (33%), Positives = 103/221 (46%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
++F +G LG + P E+LS L + VA G + ++ V V
Sbjct: 2881 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2930
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVAC--GHSLTVGLTTSGHV 526
GK++ G+ RLG G + P + AL Y KVA G LT G V
Sbjct: 2931 -EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2989
Query: 527 FTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
F+ G G+LG+ + P L+E L + + +IACG+ H A LTS E+YTWG G
Sbjct: 2990 FSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3048
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
GRLGHGD + P +V+ L V +ACGS + + L
Sbjct: 3049 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3089
Score = 176 (67.0 bits), Expect = 3.1e-28, Sum P(3) = 3.1e-28
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
SG ++ WG + +LG G + ++K PT AL ++ G +T G ++
Sbjct: 3874 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 3932
Query: 530 GSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIAC--GAYHVAVLTSRNEVYTWGKGAN 586
G G+LG + P L+E + ++++A G H L+S EVY+WG+ +
Sbjct: 3933 GYGAGGRLGVGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3991
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+LGHG+ P ++E+L+ V +A G +SA +
Sbjct: 3992 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACV 4029
Score = 169 (64.5 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG+ + + G+D G + P+ +E LDV + CG + + +T
Sbjct: 535 GQVWSWGDGDYGKLGRGGSD------GCKT----PKLIEKLQDLDVVKVRCGSQFSVALT 584
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
+ G+V++WG+ RLGHG + + P LLE L V V G H A+T E+++W
Sbjct: 585 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 644
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGP 399
G V+ P + G L+ + + CGP
Sbjct: 645 GSNDQCQHF--DTLRVTKPEPSALPG-LDTKHIVGIACGP 681
Score = 48 (22.0 bits), Expect = 3.9e-40, Sum P(2) = 3.9e-40
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 62 KLASVSKIIPGQRT--AVFQRYLRP-EKDYLSFSLIYNNGKRSLDLI--CKDKVE--AEV 114
K A K I Q + F R P +KD ++ + ++GK+ L L+ + + A
Sbjct: 874 KEAQKEKEIDEQEANASTFHRSRTPLDKDLINTGIYESSGKQCLPLVQLIQQLLRNIASQ 933
Query: 115 WIAGLKAL---ISS----GQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISS 167
+A LK + ISS Q R + + L L R L S SV T +ISS
Sbjct: 934 TVARLKDVARRISSCLDFEQHSRERSASLD---LLLRFQRLLISKLYPGESVGQTSEISS 990
Query: 168 PEV 170
PE+
Sbjct: 991 PEL 993
Score = 44 (20.5 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 433 PREVESLSG---LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
PR SL+ L +A + +W + +++ T+ S++ +L DG+ L
Sbjct: 3674 PRLAASLAACAQLSALAASHRMWALQRLRKLLTTEFGQSININRLLGDNDGETRAL 3729
Score = 42 (19.8 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R SLPRL
Sbjct: 3801 CMA--SRVAVALDKRTSLPRL 3819
Score = 40 (19.1 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 913 MRPAYIPNGLETNGVHYSDMNGER 936
++ + GL+T+ +HYS N E+
Sbjct: 1251 LQSSIFSGGLQTSQIHYS-YNEEK 1273
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 324 VQPHLLESLTM---TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GLL----GHGTDV 375
+ L+ESL +S + G+ ++ Y WG TH + G++ +G DV
Sbjct: 2541 IHVELIESLGYPPPSSPSHIKIGDKVRVKASVTTPKYKWGSVTHQSVGVVKAFSANGKDV 2600
Query: 376 -------SHW 378
SHW
Sbjct: 2601 IVDFPQQSHW 2610
Score = 38 (18.4 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G DI +P L + L VD + VT G+LYTW
Sbjct: 1619 GIDIGEP-LTDCLK--DVDLIPPFNRMLLEVTF-GKLYTW 1654
Score = 37 (18.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 469 VSSGKLFTW 477
V+ GKL+TW
Sbjct: 1646 VTFGKLYTW 1654
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 484 (175.4 bits), Expect = 4.0e-40, Sum P(2) = 4.0e-40
Identities = 125/369 (33%), Positives = 182/369 (49%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3984 AKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTL 4043
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 4044 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 4100
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G +V V G H+A +T+ G L+T+G G +G LGH D ++ P+ VE+L G R +
Sbjct: 4101 LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD 4160
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
VACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 4161 VACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 4211
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4212 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4270
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ H + EVYTWG G+LG G + P LV AL+ + V +ACGS ++ A
Sbjct: 4271 SLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4330
Query: 626 LHKWVSSAE 634
K S+ +
Sbjct: 4331 TSKPASAGK 4339
Score = 478 (173.3 bits), Expect = 3.9e-38, Sum P(3) = 3.9e-38
Identities = 118/357 (33%), Positives = 188/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V+ GE + GRLG G+ V P +
Sbjct: 2991 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 3050
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 3051 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3107
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A +TS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 3108 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3167
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3168 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3218
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3219 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3277
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3278 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3334
Score = 470 (170.5 bits), Expect = 2.8e-37, Sum P(3) = 2.8e-37
Identities = 126/343 (36%), Positives = 182/343 (53%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A G+ AA + + +VF WG +LG G I P E+L+ +V V G
Sbjct: 2959 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3016
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALI 405
AVT+ G++Y G+ T+ G LG G IP++I+ L V V G H +
Sbjct: 3017 AVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 3073
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G++F++G+G G LGH R N PR +E+L R +ACG H+AA+
Sbjct: 3074 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------- 3126
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTS 523
SSG+L+TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT
Sbjct: 3127 ----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3182
Query: 524 GHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G VF+ G +G+LG ++G +P +E +L G+ V +I CGA LT V+TWG
Sbjct: 3183 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWG 3241
Query: 583 KGANGRLGHG-DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
KG RLGHG DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3242 KGDYFRLGHGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3283
Score = 433 (157.5 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 106/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + S+ V+ + G RHA +T G+VF+WGE G+LGH + +P L
Sbjct: 3044 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3103
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 3104 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 3160
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 3161 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3220
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 3221 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 3269
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T +G V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 3270 IVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 3328
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 3329 SSHSVAWTT 3337
Score = 426 (155.0 bits), Expect = 7.3e-34, Sum P(2) = 7.3e-34
Identities = 129/392 (32%), Positives = 182/392 (46%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-MTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L + V + GE AVT G+LY G
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIG-GEQTLFAVTADGKLYATG 4023
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 4024 YGA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4081
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G + VA G H+A V ++G L+TWG
Sbjct: 4082 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT-----------AAGDLYTWGK 4130
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGH D E +LKP V AL + VACG + T+ LT V++ G YG+L
Sbjct: 4131 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4190
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4191 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4249
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 4250 VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4309
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 4310 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4341
Score = 421 (153.3 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 114/361 (31%), Positives = 174/361 (48%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+V+ P E L V IAC + +++R G V+T S D + P L
Sbjct: 438 ANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQL 487
Query: 329 LESLTMTSVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS-- 384
++ L ++ + H A+ GE+Y+WG G + G LGHG V PK IS
Sbjct: 488 VQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAF 545
Query: 385 -GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
G G V + CG ++A IT+ G+L+T+G G +G LGHG ++ + P V L GL+
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I VACG Q+ A +G++++WGDGD +LG G + P + L
Sbjct: 606 VIDVACGSGDA---------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
D + KV CG +V LT G V++ G +LG+ + + P L+E L G+ V ++
Sbjct: 657 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 715
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H LT +EV++WG + + P+ + L +H+ IACG S
Sbjct: 716 AAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Query: 623 A 623
A
Sbjct: 776 A 776
Score = 389 (142.0 bits), Expect = 6.9e-30, Sum P(2) = 6.9e-30
Identities = 98/286 (34%), Positives = 146/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE D + + G R+ PR +ES +V +A G H+A VT
Sbjct: 4071 GEVYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4120
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
G+++TWG+ GRLGH +D ++P L+E+L V V CG + T +T ++
Sbjct: 4121 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4180
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 4181 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4237
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 4238 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE-----------DGEVYTW 4286
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 4287 GDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4332
Score = 371 (135.7 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 105/338 (31%), Positives = 167/338 (49%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +G +++ P E L V + C E ++ G +YT +N+ L
Sbjct: 430 GLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA---YNSDTLA-- 484
Query: 373 TDVSHWIPKRISGPLEG--LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
P+ + G +++A+ + G + AL +TG+++++G G G LGHGD +
Sbjct: 485 -------PQLVQGLASRNIVKIAAHSDGHHYLAL-AATGEVYSWGCGDGGRLGHGDTVPL 536
Query: 431 SYPREVESLSGLRT----IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
P+ + + SG + + +ACG ++AA+ + G+L+TWG G+ RLG
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRLG 585
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGNPNADG 544
HG E P V L VACG + T+ +T +G V++ G YG+LG +DG
Sbjct: 586 HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645
Query: 545 -KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
K P L+E KL V ++ CG+ LT +VY+WGKG N RLGHG E + P L+
Sbjct: 646 CKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 604 EALKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
E L+ + V +A GS + A+ +H W S+ +Q Q
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN-DQCQ 741
Score = 360 (131.8 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 95/310 (30%), Positives = 148/310 (47%)
Query: 233 PDDCDALGDVYIWGEVIC--DNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIAC 290
P C+ L ++ + ++ C + + V +D L P+ ++ ++ IA
Sbjct: 443 PIQCEGLANLGVT-QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAA 501
Query: 291 ---GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS----VDFVTCG 343
G + AL GEV++WG GGRLGHG + +P ++ + + V + CG
Sbjct: 502 HSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW--H 401
++ A+T GELYTWG G N G LGHG+ IP ++G L+GL+V V CG
Sbjct: 561 STYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQ 617
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
T +T GQ++++GDG +G LG G P+ +E L L + V CG + A+ +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK-- 675
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
G++++WG GD RLGHG +E P + L VA G + + LT
Sbjct: 676 ---------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726
Query: 522 TSGHVFTMGS 531
V + GS
Sbjct: 727 EDSEVHSWGS 736
Score = 338 (124.0 bits), Expect = 8.4e-24, Sum P(2) = 8.4e-24
Identities = 92/281 (32%), Positives = 138/281 (49%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRA-DVLLPRPLESNVVLDVHHIACGVRHAA 296
A G+VY WG C + + G V + + +VV HIACG ++A
Sbjct: 513 ATGEVYSWG---CGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV----HIACGSTYSA 565
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAG 354
+T +GE++TWG + GRLGHG +D P L+ L V V CG + T AVT G
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 625
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++++WGDG + G LG G PK I L+ L V V CG + +T GQ++++
Sbjct: 626 QVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSW 682
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
G G LGHG ++V YP+ +E L G + I VA G H A+ E ++
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE-----------DSEV 731
Query: 475 FTWGDGDKNRLGHGD--KEPRLKPTCVPALIDYNFHKVACG 513
+WG D+ + H D + + +P+ +P L + +ACG
Sbjct: 732 HSWGSNDQCQ--HFDTLRVTKPEPSALPGLDTKHIVGIACG 770
Score = 277 (102.6 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 73/221 (33%), Positives = 111/221 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A GD+Y WG+ + G + + L + L L+ + V+DV ACG A
Sbjct: 4121 AAGDLYTWGK---GRYGRLGHSDSEDQLKPK----LVEALQGHRVVDV---ACGSGDAQT 4170
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 4171 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4230
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H + G+++T+G
Sbjct: 4231 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG 4287
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 4288 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4328
Score = 256 (95.2 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 75/238 (31%), Positives = 111/238 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 3129 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 3178
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 3179 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3238
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHG+DV P+ + G L G ++ V G H +T GQ++ +GD
Sbjct: 3239 TWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3295
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 3296 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 3351
Score = 240 (89.5 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 73/221 (33%), Positives = 103/221 (46%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
++F +G LG + P E+LS L + VA G + ++ V V
Sbjct: 2971 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3020
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVAC--GHSLTVGLTTSGHV 526
GK++ G+ RLG G + P + AL Y KVA G LT G V
Sbjct: 3021 -EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3079
Query: 527 FTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
F+ G G+LG+ + P L+E L + + +IACG+ H A LTS E+YTWG G
Sbjct: 3080 FSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3138
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
GRLGHGD + P +V+ L V +ACGS + + L
Sbjct: 3139 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3179
Score = 176 (67.0 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
SG ++ WG + +LG G + ++K PT AL ++ G +T G ++
Sbjct: 3964 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4022
Query: 530 GSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIAC--GAYHVAVLTSRNEVYTWGKGAN 586
G G+LG + P L+E + ++++A G H L+S EVY+WG+ +
Sbjct: 4023 GYGAGGRLGVGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4081
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+LGHG+ P ++E+L+ V +A G +SA +
Sbjct: 4082 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACV 4119
Score = 169 (64.5 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG+ + + G+D G + P+ +E LDV + CG + + +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSD------GCKT----PKLIEKLQDLDVVKVRCGSQFSVALT 674
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
+ G+V++WG+ RLGHG + + P LLE L V V G H A+T E+++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGP 399
G V+ P + G L+ + + CGP
Sbjct: 735 GSNDQCQHF--DTLRVTKPEPSALPG-LDTKHIVGIACGP 771
Score = 48 (22.0 bits), Expect = 4.0e-40, Sum P(2) = 4.0e-40
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 62 KLASVSKIIPGQRT--AVFQRYLRP-EKDYLSFSLIYNNGKRSLDLI--CKDKVE--AEV 114
K A K I Q + F R P +KD ++ + ++GK+ L L+ + + A
Sbjct: 964 KEAQKEKEIDEQEANASTFHRSRTPLDKDLINTGIYESSGKQCLPLVQLIQQLLRNIASQ 1023
Query: 115 WIAGLKAL---ISS----GQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISS 167
+A LK + ISS Q R + + L L R L S SV T +ISS
Sbjct: 1024 TVARLKDVARRISSCLDFEQHSRERSASLD---LLLRFQRLLISKLYPGESVGQTSEISS 1080
Query: 168 PEV 170
PE+
Sbjct: 1081 PEL 1083
Score = 44 (20.5 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 433 PREVESLSG---LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
PR SL+ L +A + +W + +++ T+ S++ +L DG+ L
Sbjct: 3764 PRLAASLAACAQLSALAASHRMWALQRLRKLLTTEFGQSININRLLGDNDGETRAL 3819
Score = 42 (19.8 bits), Expect = 3.9e-38, Sum P(3) = 3.9e-38
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R SLPRL
Sbjct: 3891 CMA--SRVAVALDKRTSLPRL 3909
Score = 40 (19.1 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 913 MRPAYIPNGLETNGVHYSDMNGER 936
++ + GL+T+ +HYS N E+
Sbjct: 1341 LQSSIFSGGLQTSQIHYS-YNEEK 1363
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 324 VQPHLLESLTM---TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GLL----GHGTDV 375
+ L+ESL +S + G+ ++ Y WG TH + G++ +G DV
Sbjct: 2631 IHVELIESLGYPPPSSPSHIKIGDKVRVKASVTTPKYKWGSVTHQSVGVVKAFSANGKDV 2690
Query: 376 -------SHW 378
SHW
Sbjct: 2691 IVDFPQQSHW 2700
Score = 38 (18.4 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G DI +P L + L VD + VT G+LYTW
Sbjct: 1709 GIDIGEP-LTDCLK--DVDLIPPFNRMLLEVTF-GKLYTW 1744
Score = 37 (18.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 469 VSSGKLFTW 477
V+ GKL+TW
Sbjct: 1736 VTFGKLYTW 1744
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 490 (177.5 bits), Expect = 7.2e-40, Sum P(3) = 7.2e-40
Identities = 125/369 (33%), Positives = 183/369 (49%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A V +P P E+ L + G + VT G+++ G +GGRLG G + + P L
Sbjct: 3971 AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTL 4030
Query: 329 LESLTMTSVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
LES+ + V G H A++ GE+Y+WG+ G LGHG P+ I
Sbjct: 4031 LESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES- 4087
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G++V V G H+A +T+ G L+T+G G +G LGH D ++ P+ VE+L G R +
Sbjct: 4088 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD 4147
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ACG Q+ +++WGDGD +LG G + P + +L
Sbjct: 4148 IACGSGDA---------QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 4198
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACG 565
KV CG +V LT SG V+T G Y +LG+ + D + P V+ L G+ V IA G
Sbjct: 4199 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG 4257
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ H T EVYTWG G+LG G + P LV AL+ + V +ACGS ++ A
Sbjct: 4258 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4317
Query: 626 LHKWVSSAE 634
K S+ +
Sbjct: 4318 TSKPASAGK 4326
Score = 478 (173.3 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 118/357 (33%), Positives = 188/357 (52%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLL 329
+ +P E+ L+V +A G + VT +G+V+ GE + GRLG G+ V P +
Sbjct: 2980 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 3039
Query: 330 ESLTMTSVDFVTC--GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
+L+ V V G H A+T+ G++++WG+G + G LGH + ++ P+ I L
Sbjct: 3040 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-L 3096
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
+ ++ + CG H+A +TS+G+L+T+G G +G LGHGD P+ V+ L G R I V
Sbjct: 3097 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3156
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
ACG Q+ A G +F+WGDGD +LG G E P + L
Sbjct: 3157 ACGSRDA---------QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ LT SG V+T G Y +LG+ + + P +VE L G+ + +A GA
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
H +T +VY WG +G+ G+G + P LV+ L+ + + +ACGS++S A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 470 (170.5 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 126/343 (36%), Positives = 182/343 (53%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A G+ AA + + +VF WG +LG G I P E+L+ +V V G
Sbjct: 2948 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3005
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTC--GPWHTALI 405
AVT+ G++Y G+ T+ G LG G IP++I+ L V V G H +
Sbjct: 3006 AVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 3062
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G++F++G+G G LGH R N PR +E+L R +ACG H+AA+
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------- 3115
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTS 523
SSG+L+TWG G+ RLGHGD +LKP V L+ + +VACG + T+ LT
Sbjct: 3116 ----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 524 GHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G VF+ G +G+LG ++G +P +E +L G+ V +I CGA LT V+TWG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWG 3230
Query: 583 KGANGRLGHG-DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
KG RLGHG DV RK P +VE L+ + + ++A G+ + A+
Sbjct: 3231 KGDYFRLGHGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 436 (158.5 bits), Expect = 1.1e-33, Sum P(3) = 1.1e-33
Identities = 107/309 (34%), Positives = 156/309 (50%)
Query: 271 VLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
V +PR + S+ V+ + G RHA +T G+VF+WGE G+LGH + +P L
Sbjct: 3033 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3092
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+E+L + + CG H+ A+T +GELYTWG G + G LGHG + + PK + L
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLL 3149
Query: 389 GLQVASVTCGPW--HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
G +V V CG T +T G +F++GDG FG LG G + + P+ +E L+G
Sbjct: 3150 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3209
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ CG + A+ + SG ++TWG GD RLGHG KP V L
Sbjct: 3210 IECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 3258
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG 565
VA G + +T SG V+ G +GQ GN + P LV+ L G+ + +ACG
Sbjct: 3259 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACG 3317
Query: 566 AYHVAVLTS 574
+ H T+
Sbjct: 3318 SSHSVAWTT 3326
Score = 433 (157.5 bits), Expect = 1.1e-33, Sum P(3) = 1.1e-33
Identities = 129/392 (32%), Positives = 184/392 (46%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G ++ WG G+LG G + P E+L T+ V + GE AVT G+LY G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATG 4010
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G LG G S P + ++ +V G H ++S G+++++G+
Sbjct: 4011 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG+R PR +ESL G+ + VA G H+A V ++G L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-----------AAGDLYTWGK 4117
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQL 537
G RLGH D E +LKP V AL + +ACG + T+ LT V++ G YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177
Query: 538 GNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G +DG K+P + D L G V ++ CG+ LT VYTWGKG RLGHG +
Sbjct: 4178 GRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4236
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QL---QCSAC---RQAF 645
+ P V+ L+ + V IA GS + ++ W + E QL +A R
Sbjct: 4237 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4296
Query: 646 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAP 677
K+ N CG H + S+ K A P
Sbjct: 4297 ALQGKKVNRVACGSAHTLAWSTSKPASAGKLP 4328
Score = 423 (154.0 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 114/361 (31%), Positives = 174/361 (48%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+V+ P E L V IAC + +++R G V+T S D + P L
Sbjct: 437 ANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQL 486
Query: 329 LESLTMTSVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS-- 384
++ L ++ + H A+ GE+Y+WG G + G LGHG V PK IS
Sbjct: 487 VQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAF 544
Query: 385 -GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
G G V + CG ++A IT+ G+L+T+G G +G LGHG ++ + P V L GL+
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
I VACG Q+ A +G++++WGDGD +LG G + P + L
Sbjct: 605 VIDVACGSGDA---------QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 655
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEI 562
D + KV CG ++ LT G V++ G +LG+ + + P L+E L G+ V ++
Sbjct: 656 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 714
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
A G+ H LT +EV++WG + + PA + L +H+ IACG S
Sbjct: 715 AAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSF 774
Query: 623 A 623
A
Sbjct: 775 A 775
Score = 393 (143.4 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 97/286 (33%), Positives = 147/286 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WGE D + + G R+ PR +ES ++V +A G H+A VT
Sbjct: 4058 GEVYSWGEA---------EDGKLGH-GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAGELY 357
G+++TWG+ GRLGH +D ++P L+E+L V + CG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WGDG + G LG G +P +I L GL V V CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ LGHG +V PR+V+ L G + IA+A G H E G+++TW
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-----------DGEVYTW 4273
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GD D+ +LG G +P V AL ++VACG + T+ +TS
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319
Score = 370 (135.3 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 105/338 (31%), Positives = 167/338 (49%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +G +++ P E L V + C E ++ G +YT +N+ L
Sbjct: 429 GLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA---YNSDTLA-- 483
Query: 373 TDVSHWIPKRISGPLEG--LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
P+ + G +++A+ + G + AL +TG+++++G G G LGHGD +
Sbjct: 484 -------PQLVQGLASRNIVKIAAHSDGHHYLAL-AATGEVYSWGCGDGGRLGHGDTVPL 535
Query: 431 SYPREVESLSGLRT----IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
P+ + + SG + + +ACG ++AA+ + G+L+TWG G+ RLG
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRLG 584
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGH--SLTVGLTTSGHVFTMGSTVYGQLGNPNADG 544
HG E P V L VACG + T+ +T +G V++ G YG+LG +DG
Sbjct: 585 HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 644
Query: 545 -KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
K P L+E KL V ++ CG+ LT +VY+WGKG N RLGHG E + P L+
Sbjct: 645 CKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 703
Query: 604 EALKDRHVKYIACGSNYSAAIC----LHKWVSSAEQLQ 637
E L+ + V +A GS + A+ +H W S+ +Q Q
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN-DQCQ 740
Score = 359 (131.4 bits), Expect = 7.7e-26, Sum P(2) = 7.7e-26
Identities = 95/310 (30%), Positives = 148/310 (47%)
Query: 233 PDDCDALGDVYIWGEVIC--DNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIAC 290
P C+ L ++ + ++ C + + V +D L P+ ++ ++ IA
Sbjct: 442 PIQCEGLANLGVT-QIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAA 500
Query: 291 ---GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS----VDFVTCG 343
G + AL GEV++WG GGRLGHG + +P ++ + + V + CG
Sbjct: 501 HSDGHHYLALAAT-GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 559
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW--H 401
++ A+T GELYTWG G N G LGHG+ IP ++G L+GL+V V CG
Sbjct: 560 STYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQ 616
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
T +T GQ++++GDG +G LG G P+ +E L L + V CG + A+ +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK-- 674
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
G++++WG GD RLGHG +E P + L VA G + + LT
Sbjct: 675 ---------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725
Query: 522 TSGHVFTMGS 531
V + GS
Sbjct: 726 EDSEVHSWGS 735
Score = 336 (123.3 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 92/281 (32%), Positives = 137/281 (48%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRA-DVLLPRPLESNVVLDVHHIACGVRHAA 296
A G+VY WG C + + G V + + +VV HIACG ++A
Sbjct: 512 ATGEVYSWG---CGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV----HIACGSTYSA 564
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG--EFHTCAVTMAG 354
+T +GE++TWG + GRLGHG +D P L+ L V V CG + T AVT G
Sbjct: 565 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 624
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
++++WGDG + G LG G PK I L+ L V V CG + +T GQ++++
Sbjct: 625 QVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSW 681
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKL 474
G G LGHG ++V YP+ +E L G + I VA G H A+ E ++
Sbjct: 682 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE-----------DSEV 730
Query: 475 FTWGDGDKNRLGHGD--KEPRLKPTCVPALIDYNFHKVACG 513
+WG D+ + H D + + +P +P L + +ACG
Sbjct: 731 HSWGSNDQCQ--HFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 281 (104.0 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 74/221 (33%), Positives = 111/221 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A GD+Y WG+ + G + + L + L L+ + V+D IACG A
Sbjct: 4108 AAGDLYTWGK---GRYGRLGHSDSEDQLKPK----LVEALQGHRVVD---IACGSGDAQT 4157
Query: 298 V--TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ T V++WG+ G+LG G P ++SLT V V CG + A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+YTWG G ++ LGHG+D P+++ G L+G +V ++ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
D G LG G + PR V +L G + VACG HT A
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 281 (104.0 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 86/287 (29%), Positives = 132/287 (45%)
Query: 170 VSVSLNHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXX 229
V+V+L+ P F E V + + +D+ NM V D+F+
Sbjct: 3883 VAVALDKRTPLPRLFLDE----VAKKIRELMADSENMDVLHESHDIFK-REQDEQLVQWM 3937
Query: 230 XXAPDD----CDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDV 285
PDD G +Y WG ++ + G + A V +P P E+ L
Sbjct: 3938 NRRPDDWTLSAGGSGTIYGWGH---NHRGQLGGIEG-------AKVKVPTPCEALATLRP 3987
Query: 286 HHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVD--FVTCG 343
+ G + VT G+++ G +GGRLG G + + P LLES+ + V G
Sbjct: 3988 VQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSG 4047
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
H A++ GE+Y+WG+ G LGHG P+ I L G++V V G H+A
Sbjct: 4048 GKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSA 4104
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
+T+ G L+T+G G +G LGH D ++ P+ VE+L G R + +ACG
Sbjct: 4105 CVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151
Score = 257 (95.5 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 75/238 (31%), Positives = 112/238 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV- 298
G++Y WG + G N L + +L L V+ +ACG R A +
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVL---LGHRVI----QVACGSRDAQTLA 3167
Query: 299 -TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
T +G VF+WG+ G+LG G + P +E L V + CG + A+T +G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
TWG G + LGHG+DV P+ + G L G ++ V G H +T +GQ++ +GD
Sbjct: 3228 TWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G G+G P V+ L G + VACG H+ A V V ++ SV LF
Sbjct: 3285 DHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV--ATPSVHEPVLF 3340
Score = 240 (89.5 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 73/221 (33%), Positives = 103/221 (46%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
++F +G LG + P E+LS L + VA G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVAC--GHSLTVGLTTSGHV 526
GK++ G+ RLG G + P + AL Y KVA G LT G V
Sbjct: 3010 -EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 527 FTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
F+ G G+LG+ + P L+E L + + +IACG+ H A LTS E+YTWG G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIE-ALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
GRLGHGD + P +V+ L V +ACGS + + L
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
Score = 175 (66.7 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
SG ++ WG + +LG G + ++K PT AL ++ G +T G ++
Sbjct: 3951 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 530 GSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIAC--GAYHVAVLTSRNEVYTWGKGAN 586
G G+LG + P L+E + ++++A G H L+S EVY+WG+ +
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G+LGHG+ P ++E+L+ V +A G +SA +
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Score = 51 (23.0 bits), Expect = 7.2e-40, Sum P(3) = 7.2e-40
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 62 KLASVSKIIPGQRT--AVFQRYLRP-EKDYLSFSLIYNNGKRSLDLI--CKDKVE--AEV 114
K A K I Q + F R P +KD ++ + ++GK+ L L+ + + A
Sbjct: 963 KEAQKEKEIDEQEANASTFHRSRTPLDKDLINTGICESSGKQCLPLVQLIQQLLRNIASQ 1022
Query: 115 WIAGLKAL---ISS----GQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISS 167
+A LK + ISS Q R + + L L R L S S+ T DISS
Sbjct: 1023 TVARLKDVARRISSCLDFEQHSRERSASLD---LLLRFQRLLISKLYPGESIGQTSDISS 1079
Query: 168 PEV 170
PE+
Sbjct: 1080 PEL 1082
Score = 43 (20.2 bits), Expect = 7.2e-40, Sum P(3) = 7.2e-40
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 165 ISSPEVSVSLNHPISSPTSFQTEGSISV 192
+SS V V +HP + TS T G++ +
Sbjct: 3607 LSSQPVVVESSHPYTDDTS--TSGTVKI 3632
Score = 40 (19.1 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 691 AKLNKVSEASNRRNSLPRLS 710
A NK+S ASN + + P L+
Sbjct: 3362 AASNKISGASNSKPNRPSLA 3381
Score = 40 (19.1 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 913 MRPAYIPNGLETNGVHYSDMNGER 936
++ + GL+T+ +HYS N E+
Sbjct: 1337 LQSSIFSGGLQTSQIHYS-YNEEK 1359
Score = 38 (18.4 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 690 FAKLNKVSEASNRRNSLPRLSGENKDRLDKSDLKLSK 726
FA L ++ AS +SLP + LD SD+++++
Sbjct: 2477 FA-LKSLTGASGNASSLPGVEALVGWLLDHSDIQVTE 2512
Score = 37 (18.1 bits), Expect = 6.2e-38, Sum P(3) = 6.2e-38
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 689 CFAKLNKVSEASNRRNSLPRL 709
C A ++V+ A ++R LPRL
Sbjct: 3878 CMA--SRVAVALDKRTPLPRL 3896
Score = 37 (18.1 bits), Expect = 8.6e-37, Sum P(3) = 8.6e-37
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 61 LKLASVSKIIPGQRTAVFQRYLR--PE 85
LKLAS + ++P + A+F + R PE
Sbjct: 1676 LKLASKNFLLPSVQYAMFCGWQRLIPE 1702
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 449 (163.1 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 129/399 (32%), Positives = 190/399 (47%)
Query: 232 APDDCDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACG 291
+PD GD I E C+ V + GT+ +L P+ S D I G
Sbjct: 356 SPDSIQT-GDAPIVSET-CEVYVWGSNSSHQLVEGTQEKILQPKLAPS--FSDAQTIEAG 411
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT---SVDFVTCG---EF 345
+++ G V G+ S GRLG G D L+ LT S+ V+ +
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLG---DSNNQSTLKKLTFEPHRSIKKVSSSKGSDG 468
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
HT A T GE+++WGDG + G LGHG + PK I GPL+G V V+ G H+A +
Sbjct: 469 HTLAFTTEGEVFSWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G+L+T+G+G FG LGHGD + + P V+ +S + V+CG HT A+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--VSCGSSHTIAL-------- 576
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
S ++++G GD +LGHGD KP + AL KV G ++ LT++G
Sbjct: 577 --SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQ 634
Query: 526 VFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
V+ G G+ A P L+E+ LA + +I+ G H L+ NEVY WG +
Sbjct: 635 VYAWGCGACLGCGSSEATALRPKLIEE-LAATRIVDISIGDSHCLSLSHDNEVYAWGNNS 693
Query: 586 NGRLGHGDVEDRKT-PALVEALKDRHVKYIACGSNYSAA 623
G+ G G+ T P V L ++ I+ G+++S A
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 290 (107.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 83/300 (27%), Positives = 148/300 (49%)
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL 390
S T S D + G+ + T E+Y WG + + L GT PK ++
Sbjct: 351 SRTCASPDSIQTGDAPIVSETC--EVYVWGSNSSHQ--LVEGTQEKILQPK-LAPSFSDA 405
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV--ESLSGLRTIAVA 448
Q ++ G + T +I++ G + G G++G LG GD N S +++ E ++ ++ +
Sbjct: 406 Q--TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 449 CGV-WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
G HT A + G++F+WGDGD +LGHG+ + P + +
Sbjct: 464 KGSDGHTLAFT-----------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 508 HK-VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACG 565
V+ G+ + +T G ++T G +G+LG+ +++ + +P LV+D +V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI---SNVGEVSCG 569
Query: 566 AYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ H L+ V+++G G NG+LGHGD P ++EAL+ ++ + GS S A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 151 (58.2 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 39/153 (25%), Positives = 74/153 (48%)
Query: 257 GADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
G D G V P+ +E+ + + + G + + +T G+V+ WG G LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLG 645
Query: 317 HGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV 375
G + ++P L+E L T + ++ G+ H +++ E+Y WG+ ++ G G G
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGN--NSMGQCGQGNST 703
Query: 376 SHWI-PKRISGPLEGLQVASVTCGPWHTALITS 407
PK++SG L+G+ + ++ G H+ T+
Sbjct: 704 GPITKPKKVSG-LDGIAIQQISAGTSHSLAWTA 735
Score = 37 (18.1 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 536 QLGNPNADGKLPCLVEDKLAG 556
++ P D + CL+E L+G
Sbjct: 1183 EMDTPQLDKCMSCLLEVALSG 1203
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 441 (160.3 bits), Expect = 8.3e-38, P = 8.3e-38
Identities = 110/337 (32%), Positives = 168/337 (49%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
VL PR + + V + CG+RH V G V+T G G+LGH K +P +
Sbjct: 22 VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHE--KSRKKPEQVV 79
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEG 389
+L ++ V+CGE HT A+ G++Y WG D GLLG + +P+ I L
Sbjct: 80 ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIR--VPRNIKS-LSD 136
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVA 448
+Q+ V CG +H+ ++ ++F +G +G LG G D K + P+ ++SL G+ + VA
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
G H+ ++T S G +F WG +LG D+ R P + +L
Sbjct: 197 AGGAHS-----FVLTLS------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV 245
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYH 568
+ CG T LT G VFT G+ YGQLG+ + ++ +L G V +IACG H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQH 305
Query: 569 V-AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
A + S +Y++G G NG+LG G +RK+P V+
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 389 (142.0 bits), Expect = 3.6e-32, P = 3.6e-32
Identities = 107/324 (33%), Positives = 163/324 (50%)
Query: 307 WGEESGGRLG-HGVGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+LG G+ ++IV +P + V V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG---DGTFGV 421
+ G LGH + S P+++ L+ + +V+CG HT + GQ++ +G DG G+
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 422 LGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
LG + + PR ++SLS ++ + VACG +H+ A+ S AS ++F WG
Sbjct: 119 LG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-------SKAS----EVFCWGQNK 165
Query: 482 KNRLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-N 539
+LG G D + + P + +L+ F +VA G + + LT SG +F G +GQLG N
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225
Query: 540 PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT 599
D +P L++ L + + I CG H A LT V+T+G G G+LGH
Sbjct: 226 DENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 600 PALVEALKDRHVKYIACGSNYSAA 623
P V L V IACG +++A
Sbjct: 285 PRKVFELMGSIVTQIACGRQHTSA 308
Score = 323 (118.8 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 80/261 (30%), Positives = 126/261 (48%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY WG +D + LG+ + +PR ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG---------LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 300 RQGEVFTWGEESGGRLGHGVG-KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+ EVF WG+ G+LG G+ K P L++SL V G H+ +T++G ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG + ++P + L ++ + CG HTA +T G +FTFG G
Sbjct: 214 WG--RNKFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGH + PR+V L G +ACG HT+A V SSG+++++G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP----------SSGRIYSFG 320
Query: 479 DGDKNRLGHGDKEPRLKPTCV 499
G +LG G R P V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTV 341
Score = 302 (111.4 bits), Expect = 8.9e-23, P = 8.9e-23
Identities = 84/270 (31%), Positives = 129/270 (47%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG+ + LG G D + R S +V V CG HT + G ++T G
Sbjct: 4 WGNASFGQLGLG-GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G LGH K+ P +V +L +AV+CG HT A+ + G+++ WG
Sbjct: 63 LGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 479 DGDKNRLGH-GDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+LG G +E P + +L D +VACG+ ++ L+ + VF G YGQL
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 538 GNPNADGKL---PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
G D K P L++ L G ++A G H VLT ++ WG+ G+LG D
Sbjct: 170 GL-GIDCKKQASPQLIKS-LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR P L+++L+ + + YI CG +++AA+
Sbjct: 228 NDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 441 (160.3 bits), Expect = 8.4e-38, P = 8.4e-38
Identities = 110/337 (32%), Positives = 168/337 (49%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
VL PR + + V + CG+RH V G V+T G G+LGH K +P +
Sbjct: 22 VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHE--KSRKKPEQVV 79
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEG 389
+L ++ V+CGE HT A+ G++Y WG D GLLG + +P+ I L
Sbjct: 80 ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIR--VPRNIKS-LSD 136
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVA 448
+Q+ V CG +H+ ++ ++F +G +G LG G D K + P+ ++SL G+ + VA
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
G H+ ++T S G +F WG +LG D+ R P + +L
Sbjct: 197 AGGAHS-----FVLTLS------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV 245
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYH 568
+ CG T LT G VFT G+ YGQLG+ + ++ +L G V +IACG H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQH 305
Query: 569 V-AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
A + S +Y++G G NG+LG G +RK+P V+
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 389 (142.0 bits), Expect = 3.6e-32, P = 3.6e-32
Identities = 107/324 (33%), Positives = 163/324 (50%)
Query: 307 WGEESGGRLG-HGVGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+LG G+ ++IV +P + V V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG---DGTFGV 421
+ G LGH + S P+++ L+ + +V+CG HT + GQ++ +G DG G+
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 422 LGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
LG + + PR ++SLS ++ + VACG +H+ A+ S AS ++F WG
Sbjct: 119 LG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-------SKAS----EVFCWGQNK 165
Query: 482 KNRLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-N 539
+LG G D + + P + +L+ F +VA G + + LT SG +F G +GQLG N
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225
Query: 540 PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT 599
D +P L++ L + + I CG H A LT V+T+G G G+LGH
Sbjct: 226 DENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 600 PALVEALKDRHVKYIACGSNYSAA 623
P V L V IACG +++A
Sbjct: 285 PRKVFELMGSIVTQIACGRQHTSA 308
Score = 323 (118.8 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 80/261 (30%), Positives = 126/261 (48%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY WG +D + LG+ + +PR ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG---------LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 300 RQGEVFTWGEESGGRLGHGVG-KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+ EVF WG+ G+LG G+ K P L++SL V G H+ +T++G ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG + ++P + L ++ + CG HTA +T G +FTFG G
Sbjct: 214 WG--RNKFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGH + PR+V L G +ACG HT+A V SSG+++++G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP----------SSGRIYSFG 320
Query: 479 DGDKNRLGHGDKEPRLKPTCV 499
G +LG G R P V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTV 341
Score = 302 (111.4 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 84/270 (31%), Positives = 129/270 (47%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG+ + LG G D + R S +V V CG HT + G ++T G
Sbjct: 4 WGNASFGQLGLG-GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G LGH K+ P +V +L +AV+CG HT A+ + G+++ WG
Sbjct: 63 LGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 479 DGDKNRLGH-GDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+LG G +E P + +L D +VACG+ ++ L+ + VF G YGQL
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 538 GNPNADGKL---PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
G D K P L++ L G ++A G H VLT ++ WG+ G+LG D
Sbjct: 170 GL-GIDCKKQASPQLIKS-LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR P L+++L+ + + YI CG +++AA+
Sbjct: 228 NDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 440 (159.9 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 109/337 (32%), Positives = 168/337 (49%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
VL PR + + V + CG+RH V G V+T G G+LGH K +P +
Sbjct: 22 VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHE--KSRKKPEQVV 79
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEG 389
+L ++ V+CGE HT A+ G++Y WG D GLLG + +P+ I L
Sbjct: 80 ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIR--VPRNIKS-LSD 136
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVA 448
+Q+ V CG +H+ ++ ++F +G +G LG G D K + P+ ++SL G+ + +A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
G H+ ++T S G +F WG +LG D+ R P + +L
Sbjct: 197 AGGAHS-----FVLTLS------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIV 245
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYH 568
+ CG T LT G VFT G+ YGQLG+ + ++ +L G V +IACG H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQH 305
Query: 569 V-AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
A + S +Y++G G NG+LG G +RK+P V+
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 388 (141.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 106/324 (32%), Positives = 163/324 (50%)
Query: 307 WGEESGGRLG-HGVGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+LG G+ ++IV +P + V V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG---DGTFGV 421
+ G LGH + S P+++ L+ + +V+CG HT + GQ++ +G DG G+
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 422 LGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
LG + + PR ++SLS ++ + VACG +H+ A+ S AS ++F WG
Sbjct: 119 LG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-------SKAS----EVFCWGQNK 165
Query: 482 KNRLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-N 539
+LG G D + + P + +L+ F ++A G + + LT SG +F G +GQLG N
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225
Query: 540 PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT 599
D +P L++ L + + I CG H A LT V+T+G G G+LGH
Sbjct: 226 DENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 600 PALVEALKDRHVKYIACGSNYSAA 623
P V L V IACG +++A
Sbjct: 285 PRKVFELMGSIVTQIACGRQHTSA 308
Score = 322 (118.4 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 79/261 (30%), Positives = 126/261 (48%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY WG +D + LG+ + +PR ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG---------LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 300 RQGEVFTWGEESGGRLGHGVG-KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+ EVF WG+ G+LG G+ K P L++SL + G H+ +T++G ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG + ++P + L ++ + CG HTA +T G +FTFG G
Sbjct: 214 WG--RNKFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGH + PR+V L G +ACG HT+A V SSG+++++G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP----------SSGRIYSFG 320
Query: 479 DGDKNRLGHGDKEPRLKPTCV 499
G +LG G R P V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTV 341
Score = 303 (111.7 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 85/270 (31%), Positives = 129/270 (47%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG+ + LG G D + R S +V V CG HT + G ++T G
Sbjct: 4 WGNASFGQLGLG-GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G LGH K+ P +V +L +AV+CG HT A+ + G+++ WG
Sbjct: 63 LGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 479 DGDKNRLGH-GDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+LG G +E P + +L D +VACG+ ++ L+ + VF G YGQL
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 538 GNPNADGKL---PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
G D K P L++ L G +IA G H VLT ++ WG+ G+LG D
Sbjct: 170 GL-GIDCKKQASPQLIKS-LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR P L+++L+ + + YI CG +++AA+
Sbjct: 228 NDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 439 (159.6 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 110/337 (32%), Positives = 168/337 (49%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
VL PR + + V + CG+RH V G V+T G G+LGH K +P +
Sbjct: 22 VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHE--KSRKKPEQVV 79
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEG 389
+L ++ V+CGE HT A+ G++Y WG D GL+G + +P+ I L
Sbjct: 80 ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR--VPRNIKS-LSD 136
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVA 448
+Q+ V CG +H+ ++ ++F +G +G LG G D K + P+ ++SL G+ + VA
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
G H+ ++T S G +F WG +LG D+ R P + +L
Sbjct: 197 AGGAHS-----FVLTLS------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYH 568
+ CG T LT G VFT G+ YGQLG+ + ++ +L G V EIACG H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQH 305
Query: 569 V-AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
A + S +Y++G G NG+LG G +RK+P V+
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 384 (140.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 106/322 (32%), Positives = 162/322 (50%)
Query: 307 WGEESGGRLG-HGVGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+LG G+ ++IV +P + V V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH 424
+ G LGH + S P+++ L+ + +V+CG HT + GQ++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 425 -GDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
G + + PR ++SLS ++ + VACG +H+ A+ S AS ++F WG
Sbjct: 119 VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-------SKAS----EVFCWGQNKYG 167
Query: 484 RLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G D + + P + +L+ F +VA G + + LT SG +F G +GQLG N
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D +P L++ L + + I CG H A LT V+T+G G G+LGH P
Sbjct: 228 NDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V IACG +++A
Sbjct: 287 KVFELMGSIVTEIACGRQHTSA 308
Score = 321 (118.1 bits), Expect = 8.1e-25, P = 8.1e-25
Identities = 80/261 (30%), Positives = 125/261 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY WG +D + +G+ + +PR ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG---------LDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 300 RQGEVFTWGEESGGRLGHGVG-KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+ EVF WG+ G+LG G K P LL+SL V G H+ +T++G ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG + ++P + L ++ + CG HTA +T G +FTFG G
Sbjct: 214 WG--RNKFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGH + PR+V L G +ACG HT+A V SSG+++++G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP----------SSGRIYSFG 320
Query: 479 DGDKNRLGHGDKEPRLKPTCV 499
G +LG G R P V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTV 341
Score = 302 (111.4 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 84/270 (31%), Positives = 129/270 (47%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG+ + LG G D + R S +V V CG HT + G ++T G
Sbjct: 4 WGNASFGQLGLG-GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G LGH K+ P +V +L +AV+CG HT A+ + G+++ WG
Sbjct: 63 LGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 479 DGDKNRLGH-GDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+LG G +E P + +L D +VACG+ ++ L+ + VF G YGQL
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 538 GNPNADGKL---PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
G D K P L++ L G ++A G H VLT ++ WG+ G+LG D
Sbjct: 170 GL-GTDCKKQTSPQLLKS-LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR P L+++L+ + + YI CG +++AA+
Sbjct: 228 NDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 320 (117.7 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 95/295 (32%), Positives = 141/295 (47%)
Query: 297 LVTRQGEVFTWGEESGGRLGHGV-GKDIVQP--HLLESLTMTSVDFVTCGEFHTCAVTMA 353
L T +G + TWG S +LG V KD QP L + + + ++ G +++ +T
Sbjct: 709 LDTSRG-LMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTEN 767
Query: 354 GELYTWGDG---THNAGLLGHGTDVSHWIPKRISGPLEGLQ-VASVTCGPWHTALITSTG 409
G++Y WG G T +LG +P + LE L V SV+ G H A + + G
Sbjct: 768 GDVYLWGRGAVKTPAVPILGIPQIEDQLLPFK----LESLSDVVSVSIGFCHGAAVRANG 823
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
+L T+G G G LGHGD N P+ ++SL+ V CG HT + +T++
Sbjct: 824 ELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHT-----ICLTKN---- 874
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
GK+++WG + +LG GD P V AL YN ++A G + LTTS V
Sbjct: 875 --GKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVF 932
Query: 530 GSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
G+ +G + LP LV L ++ + CG Y A +T +VYTWG G
Sbjct: 933 GNGA--AMGAASVVS-LPTLVPS-LKYLHIDRLCCGHYSTAAITECGDVYTWGTG 983
Score = 305 (112.4 bits), Expect = 2.7e-37, Sum P(3) = 2.7e-37
Identities = 81/222 (36%), Positives = 112/222 (50%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRA--DVLLPRPLESNVVLDVHHIACGVRHAAL 297
GDVY+WG VK A V LG D LLP LES + DV ++ G H A
Sbjct: 768 GDVYLWGR----GAVKTPA---VPILGIPQIEDQLLPFKLES--LSDVVSVSIGFCHGAA 818
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
V GE+ TWG G+LGHG + ++P +++SLT + V CGE HT +T G++Y
Sbjct: 819 VRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVY 878
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
+WG + G LG G H P ++S LE V + G H A++T++ ++ FG+G
Sbjct: 879 SWGASEY--GQLGLGDVTQHSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
G VS P V SL L + CG + TAA+ E
Sbjct: 936 A----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITE 973
Score = 297 (109.6 bits), Expect = 9.5e-22, Sum P(2) = 9.5e-22
Identities = 86/289 (29%), Positives = 144/289 (49%)
Query: 356 LYTWGDGTH-NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
L TWG ++ G D S P+R+ + S++ G ++++++T G ++ +
Sbjct: 715 LMTWGSASNCKLGFKVTAKDQSQPTPERLPN-FNIPDICSISSGSYYSSVLTENGDVYLW 773
Query: 415 GDGTFG-----VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
G G +LG ++ P ++ESLS + ++V+ G H AAV
Sbjct: 774 GRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--VSVSIGFCHGAAVR----------- 820
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
++G+L TWG G+ +LGHGD +++P + +L + +V CG T+ LT +G V++
Sbjct: 821 ANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSW 880
Query: 530 GSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
G++ YGQLG + + L +V +IA G+ H AVLT+ EV +G GA +
Sbjct: 881 GASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGA--AM 938
Query: 590 GHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI--C--LHKWVSSAE 634
G V P LV +LK H+ + CG +AAI C ++ W + E
Sbjct: 939 GAASVVS--LPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE 985
Score = 255 (94.8 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 61/178 (34%), Positives = 94/178 (52%)
Query: 284 DVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCG 343
+V IA G H A++T EV +G +G +G + P L+ SL +D + CG
Sbjct: 909 NVLQIASGSTHCAVLTTSKEVLVFG--NGAAMG--AASVVSLPTLVPSLKYLHIDRLCCG 964
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
+ T A+T G++YTWG G LGHG + + PK I L + ++CG HTA
Sbjct: 965 HYSTAAITECGDVYTWGTGQE----LGHGGNSTETSPKLIEA-LRNQSIRQISCGGRHTA 1019
Query: 404 LITSTGQLFTFGDGTFGVLGH--GDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
+T +G++FT G +FG LG GD+ P+ +ESL+ I+V+CG + A+ +
Sbjct: 1020 FLTDSGRIFTCGKDSFGQLGQMSGDQNK---PKRIESLTKTTFISVSCGENYNVALFD 1074
Score = 251 (93.4 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 97/352 (27%), Positives = 154/352 (43%)
Query: 143 LEDSRDLTSNSASDSSVSLTRDISSPEV--SVSLNHPISSPT-SFQTEGSISVNS----E 195
L RD +S V+++ +S S S + PISSP S + +I+++S
Sbjct: 606 LTAQRDTRGSSVPHPPVNISTSTNSATTPSSSSSSTPISSPPPSLSSSSNIAISSCSASN 665
Query: 196 RSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPDDC---DALGDVYIWGEVICDN 252
S+V +DN+ + +D F A D + WG N
Sbjct: 666 LSNVLADNSGSSTGTTPTDGFSSSPPNGQSPSLSSTAHRSAIHLDTSRGLMTWGSA--SN 723
Query: 253 VVKAGADKNVNYLGTRADVLLPRP--LESNVVLDVHHIACGVRHAALVTRQGEVFTWGEE 310
K G + T D P P L + + D+ I+ G +++++T G+V+ WG
Sbjct: 724 C-KLG------FKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRG 776
Query: 311 SGGR-----LGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN 365
+ LG +D + P LESL+ V V+ G H AV GEL TWG G +
Sbjct: 777 AVKTPAVPILGIPQIEDQLLPFKLESLS--DVVSVSIGFCHGAAVRANGELLTWGVGEN- 833
Query: 366 AGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 425
G LGHG D ++ I +I L + V CG HT +T G+++++G +G LG G
Sbjct: 834 -GQLGHG-DTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLG 891
Query: 426 DRKNVSYPREVESLSGLRTIAVACGVWHTAAVV---EVIVTQSSASVSSGKL 474
D S P +V +L + +A G H A + EV+V + A++ + +
Sbjct: 892 DVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAASV 943
Score = 193 (73.0 bits), Expect = 2.7e-37, Sum P(3) = 2.7e-37
Identities = 46/131 (35%), Positives = 71/131 (54%)
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQ-LGNP-NADGKLPCLVEDK 553
PT VP+L + ++ CGH T +T G V+T G+ GQ LG+ N+ P L+E
Sbjct: 947 PTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGT---GQELGHGGNSTETSPKLIE-A 1002
Query: 554 LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
L +S+ +I+CG H A LT ++T GK + G+LG + K P +E+L
Sbjct: 1003 LRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNK-PKRIESLTKTTFIS 1061
Query: 614 IACGSNYSAAI 624
++CG NY+ A+
Sbjct: 1062 VSCGENYNVAL 1072
Score = 187 (70.9 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 51/156 (32%), Positives = 76/156 (48%)
Query: 430 VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD 489
VS P V SL L + CG + TAA+ E G ++TWG G + LGHG
Sbjct: 944 VSLPTLVPSLKYLHIDRLCCGHYSTAAITEC-----------GDVYTWGTGQE--LGHGG 990
Query: 490 KEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCL 549
P + AL + + +++CG T LT SG +FT G +GQLG + D P
Sbjct: 991 NSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNKPKR 1050
Query: 550 VEDKLAGESVEEIACGA-YHVAVL-TSRN--EVYTW 581
+E L + ++CG Y+VA+ T+R+ + + W
Sbjct: 1051 IES-LTKTTFISVSCGENYNVALFDTTRSFRDKFCW 1085
Score = 176 (67.0 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 48/145 (33%), Positives = 73/145 (50%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
+G + V LP + S L + + CG A +T G+V+TWG +G LGHG
Sbjct: 938 MGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWG--TGQELGHGGNSTET 995
Query: 325 QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
P L+E+L S+ ++CG HT +T +G ++T G + G LG + + PKRI
Sbjct: 996 SPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSF--GQLGQMSGDQNK-PKRIE 1052
Query: 385 GPLEGLQVASVTCGP-WHTALITST 408
L SV+CG ++ AL +T
Sbjct: 1053 S-LTKTTFISVSCGENYNVALFDTT 1076
Score = 142 (55.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 250 CDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGE 309
C +V G + + + G + P+ +E+ + I+CG RH A +T G +FT G+
Sbjct: 974 CGDVYTWGTGQELGHGGNSTETS-PKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGK 1032
Query: 310 ESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
+S G+LG G D +P +ESLT T+ V+CGE + A+
Sbjct: 1033 DSFGQLGQMSG-DQNKPKRIESLTKTTFISVSCGENYNVAL 1072
Score = 56 (24.8 bits), Expect = 2.7e-37, Sum P(3) = 2.7e-37
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 149 LTSNSAS-DSSVSLTRDISSPEVSVSLNHPISSPTSFQTEGSISVNSERSHVASDNTNMQ 207
+ +N S S S+ S+ +++ P+ SP + GSI+VN+ + +++NTN
Sbjct: 13 IAANGGSLVSPNSIVNSNSNSRGNLTGGRPLPSPPINTSSGSINVNNNNN--SNNNTNGG 70
Query: 208 VKGSGS 213
V S S
Sbjct: 71 VPVSSS 76
Score = 50 (22.7 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 15/60 (25%), Positives = 32/60 (53%)
Query: 138 DGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVS---LNHPISSPTSFQTEGSISVNS 194
+GG + + + SNS S +++ R + SP ++ S +N ++ ++ T G + V+S
Sbjct: 16 NGGSLVSPNSIVNSNSNSRGNLTGGRPLPSPPINTSSGSINVNNNNNSNNNTNGGVPVSS 75
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 431 (156.8 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 108/337 (32%), Positives = 167/337 (49%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
VL PR + V V + CG+RH V G V+T G G+LGH K +P +
Sbjct: 22 VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHE--KSRKKPEQVV 79
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEG 389
+L ++ V CGE HT A+ G++Y WG D GL G++ +P+ I L
Sbjct: 80 ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSD 136
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVA 448
+Q+ V CG +H+ ++ ++F +G +G LG G D + + P+ ++SL G+ + VA
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
G H+ ++T S G +F WG +LG D+ R P + +L
Sbjct: 197 AGGAHS-----FVLTLS------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYH 568
+ CG T LT G VFT G+ YGQLG+ + ++ +L G V ++ACG H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQH 305
Query: 569 V-AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
A + S +Y++G G NG+LG G +RK+P V+
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 391 (142.7 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 105/322 (32%), Positives = 161/322 (50%)
Query: 307 WGEESGGRLG-HGVGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+LG G+ ++IV +P + V V CG HT V G +YT G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG- 423
+ G LGH + S P+++ L+ + +V CG HT + GQ++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 424 HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
G + + PR ++SLS ++ + VACG +H+ A+ S AS ++F WG
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-------SKAS----EVFCWGQNKYG 167
Query: 484 RLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G D + + P + +L+ F +VA G + + LT SG +F G +GQLG N
Sbjct: 168 QLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D +P L++ L + + I CG H A LT V+T+G G G+LGH P
Sbjct: 228 NDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V +ACG +++A
Sbjct: 287 KVFELMGSIVTQVACGRQHTSA 308
Score = 317 (116.6 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 81/269 (30%), Positives = 127/269 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY WG +D + G+ + +PR ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG---------LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 300 RQGEVFTWGEESGGRLGHGVG-KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+ EVF WG+ G+LG G+ + P L++SL V G H+ +T++G ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG + ++P + L ++ + CG HTA +T G +FTFG G
Sbjct: 214 WG--RNKFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGH + PR+V L G VACG HT+A V SSG+++++G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP----------SSGRIYSFG 320
Query: 479 DGDKNRLGHGDKEPRLKPTCVPA-LIDYN 506
G +LG G R P V YN
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVKGNWFSYN 349
Score = 311 (114.5 bits), Expect = 9.7e-24, P = 9.7e-24
Identities = 83/269 (30%), Positives = 130/269 (48%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG+ ++ LG G D + R S +V V CG HT + G ++T G
Sbjct: 4 WGNASYGQLGLG-GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G LGH K+ P +V +L +AVACG HT A+ + G+++ WG
Sbjct: 63 LGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND-----------KGQVYAWG 109
Query: 479 DGDKNRLG-HGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+LG G +E P + +L D +VACG+ ++ L+ + VF G YGQL
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 538 G-NPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE 595
G + + P L++ L G ++A G H VLT ++ WG+ G+LG D
Sbjct: 170 GLGIDCQKQTSPQLIKS-LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 596 DRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR P L+++L+ + + YI CG +++AA+
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 430 (156.4 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 108/337 (32%), Positives = 168/337 (49%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
VL PR + V V + CG+RH V G V+T G G+LGH K +P +
Sbjct: 22 VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHE--KSRKKPEQVV 79
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEG 389
+L ++ V+CGE HT A+ G++Y WG D GL G++ +P+ I L
Sbjct: 80 ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSD 136
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVA 448
+Q+ V CG +H+ ++ ++F +G +G LG G + + + P+ ++SL G+ + VA
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
G H+ ++T S G +F WG +LG D+ R P + +L
Sbjct: 197 AGGAHS-----FVLTLS------GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 245
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYH 568
+ CG T LT G VFT G+ YGQLG+ + ++ +L G V +IACG H
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQH 305
Query: 569 V-AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
A + S +Y++G G NG+LG G +RK+P V+
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 389 (142.0 bits), Expect = 3.6e-32, P = 3.6e-32
Identities = 105/322 (32%), Positives = 162/322 (50%)
Query: 307 WGEESGGRLG-HGVGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+LG G+ ++IV +P + V V CG HT V G +YT G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG- 423
+ G LGH + S P+++ L+ + +V+CG HT + GQ++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 424 HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
G + + PR ++SLS ++ + VACG +H+ A+ S AS ++F WG
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-------SKAS----EVFCWGQNKYG 167
Query: 484 RLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + + + P + +L+ F +VA G + + LT SG +F G +GQLG N
Sbjct: 168 QLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D +P L++ L + + I CG H A LT V+T+G G G+LGH P
Sbjct: 228 NDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V IACG +++A
Sbjct: 287 KVFELMGSIVTQIACGRQHTSA 308
Score = 315 (115.9 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 80/269 (29%), Positives = 127/269 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY WG +D + G+ + +PR ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG---------LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 300 RQGEVFTWGEESGGRLGHGVG-KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+ EVF WG+ G+LG G+ + P L++SL V G H+ +T++G ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG + ++P + L ++ + CG HTA +T G +FTFG G
Sbjct: 214 WG--RNKFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGH + PR+V L G +ACG HT+A V SSG+++++G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP----------SSGRIYSFG 320
Query: 479 DGDKNRLGHGDKEPRLKPTCVPA-LIDYN 506
G +LG G R P V YN
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVKGNWFSYN 349
Score = 308 (113.5 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 83/269 (30%), Positives = 129/269 (47%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG+ ++ LG G D + R S +V V CG HT + G ++T G
Sbjct: 4 WGNASYGQLGLG-GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G LGH K+ P +V +L +AV+CG HT A+ + G+++ WG
Sbjct: 63 LGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 479 DGDKNRLG-HGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+LG G +E P + +L D +VACG+ ++ L+ + VF G YGQL
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 538 GNPNADGKL--PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE 595
G K P L++ L G ++A G H VLT ++ WG+ G+LG D
Sbjct: 170 GLGIECQKQTSPQLIKS-LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 596 DRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR P L+++L+ + + YI CG +++AA+
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 426 (155.0 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 108/344 (31%), Positives = 172/344 (50%)
Query: 266 GTRADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
G +++L P +S+ L+ + + CG+RH V G V+T G G+LGH +
Sbjct: 16 GIDEEIVL-EPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK- 73
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG-HGTDVSHWIPKR 382
+P + +L ++ V+CGE HT A+ G++Y WG T G LG GT+ +P+
Sbjct: 74 -RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD--GQLGLPGTEECIRVPRN 130
Query: 383 ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSG 441
I L +Q+ V CG +H+ ++ ++F++G +G LG G + K + P ++SL G
Sbjct: 131 IKS-LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLG 189
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA 501
+ +A G H+ ++T S G +F WG +LG D R PT + +
Sbjct: 190 IPFAQIAAGGAHS-----FVLTLS------GAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238
Query: 502 LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEE 561
L + CG T LT G VFT G+ YGQLG+ + ++ +L G V +
Sbjct: 239 LRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQ 298
Query: 562 IACGAYHV-AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
I CG H A + S +Y++G G NG+LG G +RK+P V+
Sbjct: 299 ITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 383 (139.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 103/322 (31%), Positives = 161/322 (50%)
Query: 307 WGEESGGRLG-HGVGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+LG G+ ++IV +P + + V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG- 423
+ G LGH + + P+ + G L+ + +V+CG HT + GQ++ +G T G LG
Sbjct: 62 DLGQLGH--EKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 424 HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
G + + PR ++SLS ++ + VACG +H+ A+ S S ++F+WG
Sbjct: 119 PGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL-------SKGS----EVFSWGQNKYG 167
Query: 484 RLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + + + P + +L+ F ++A G + + LT SG +F G +GQLG N +
Sbjct: 168 QLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D +P L++ L + V I CG H A LT V+T+G G G+LGH P
Sbjct: 228 NDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V I CG ++ A
Sbjct: 287 KVFELMGSLVTQITCGRQHTTA 308
Score = 319 (117.4 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 80/261 (30%), Positives = 123/261 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY WG D + GT + +PR ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG---------LATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS 153
Query: 300 RQGEVFTWGEESGGRLGHGVG-KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+ EVF+WG+ G+LG G K PH+++SL + G H+ +T++G ++
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG D ++P + L +V + CG HTA +T G +FTFG G
Sbjct: 214 WG--RNKFGQLGLNDDNDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LGH + PR+V L G + CG HT A V SSG+++++G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVP----------SSGRIYSFG 320
Query: 479 DGDKNRLGHGDKEPRLKPTCV 499
G +LG G R P V
Sbjct: 321 LGGNGQLGTGTTSNRKSPFTV 341
Score = 288 (106.4 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 81/269 (30%), Positives = 126/269 (46%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG+ + LG G D + R S ++ V CG HT + G ++T G
Sbjct: 4 WGNASFGQLGLG-GIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G LGH K P V +L +AV+CG HT A+ + G+++ WG
Sbjct: 63 LGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALND-----------KGQVYAWG 109
Query: 479 DGDKNRLG-HGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+LG G +E P + +L + +VACG+ ++ L+ VF+ G YGQL
Sbjct: 110 LATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQL 169
Query: 538 GNPNADGKL--PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE 595
G K P +++ L G +IA G H VLT ++ WG+ G+LG D
Sbjct: 170 GLGYEYKKQNSPHVIKS-LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN 228
Query: 596 DRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR P L+++L+ + V +I CG +++AA+
Sbjct: 229 DRYVPTLLKSLRTQKVVHICCGEDHTAAL 257
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 425 (154.7 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 111/346 (32%), Positives = 177/346 (51%)
Query: 265 LGTRADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
+G+ V++P P + D V +ACG H+ + GEV+T G + G+LGH +
Sbjct: 14 IGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--SE 71
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-DVSHWIPK 381
+P + +L + V CGE H+ A++ G++++WG G+ G LG T + + +P+
Sbjct: 72 GSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD--GQLGLTTIEDAVTVPR 129
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLS 440
I L + ++CG WH + + GQ FT+G ++G LG G + + P+ V+SL
Sbjct: 130 LIK-KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
G+ VA G H+ A+ S+S G +F WG +LG D+ R P V
Sbjct: 189 GIPLAQVAAGGAHSFAL----------SLS-GAVFGWGKNSSGQLGLSDERDRESPCHVK 237
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESV 559
L ++CG T LT SG VFT G+ GQLG+ + + ++ P V + L G V
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEV 296
Query: 560 EEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
+IACG +H +A + S +Y +G G G+LG G + K P+ V+
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 388 (141.6 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 106/322 (32%), Positives = 160/322 (49%)
Query: 307 WGEESGGRLGHGVGKDIV--QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+ G G ++ +P + + +V V CG H+ + GE+YT G T
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH 424
G LGH ++ S P+ I G L G + V CG H+ ++ GQ+F++G G+ G LG
Sbjct: 64 --GQLGHESEGSK--PEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 425 GDRKN-VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
++ V+ PR ++ L+ + ++CG WH A+ + G+ FTWG
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA-----------ADGQFFTWGQNSYG 167
Query: 484 RLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + P + P V +L +VA G + + L+ SG VF G GQLG +
Sbjct: 168 QLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D + PC V+ L + V I+CG H AVLT V+T+G G+ G+LGH + D P
Sbjct: 228 RDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V IACG +++ A
Sbjct: 287 RVLELMGSEVSQIACGRHHTLA 308
Score = 358 (131.1 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 94/313 (30%), Positives = 159/313 (50%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG ++ P P+ + + H+ACG H+ ++ QG+VF+WG S G+LG +D V
Sbjct: 66 LGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAV 125
Query: 325 Q-PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKR 382
P L++ L ++ ++CG +H A+ G+ +TWG ++ G LG G + S P+R
Sbjct: 126 TVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSY--GQLGLGKECPSQASPQR 183
Query: 383 ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGL 442
+ L+G+ +A V G H+ ++ +G +F +G + G LG D ++ P V+ L
Sbjct: 184 VKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ 242
Query: 443 RTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
+ + ++CG HTA ++T+S G +FT+G G +LGH + P V L
Sbjct: 243 KVVYISCGEEHTA-----VLTKS------GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 503 IDYNFHKVACGHSLTVGLT-TSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLA---GE 557
+ ++ACG T+ +SG ++ G GQLG + + K P V+ A G+
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQ 351
Query: 558 -SVEEIACGAYHV 569
S + AC YH+
Sbjct: 352 LSGKPDAC-KYHI 363
Score = 302 (111.4 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 80/270 (29%), Positives = 130/270 (48%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPK-RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
WG + G G G+++ IP+ ++ G + V V CG H+ + G+++T G
Sbjct: 4 WGYSSF--GQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
T G LGH S P + +L+G + VACG H+ A+ + G++F+W
Sbjct: 62 TKGQLGH--ESEGSKPEPIGALAGQHIVHVACGESHSVALSD-----------QGQVFSW 108
Query: 478 GDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQ 536
G G +LG E + P + L +++CG+ + L G FT G YGQ
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Query: 537 LG-NPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
LG + P V+ L G + ++A G H L+ V+ WGK ++G+LG D
Sbjct: 169 LGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE 227
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR++P V+ L+ + V YI+CG ++A +
Sbjct: 228 RDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 281 (104.0 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 77/252 (30%), Positives = 121/252 (48%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG AG+D + V +PR ++ + I+CG H +
Sbjct: 103 GQVFSWG---------AGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153
Query: 300 RQGEVFTWGEESGGRLGHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
G+ FTWG+ S G+LG +GK+ P ++SL + V G H+ A++++G +
Sbjct: 154 ADGQFFTWGQNSYGQLG--LGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
+ WG +++G LG + P + L +V ++CG HTA++T +G +FTFG
Sbjct: 212 FGWGK--NSSGQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFT 476
G+ G LGH + PR V L G +ACG HT A V SSG ++
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVP----------SSGMIYA 318
Query: 477 WGDGDKNRLGHG 488
+G G + +LG G
Sbjct: 319 FGCGTRGQLGTG 330
Score = 45 (20.9 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 603 VEALKDRHVKYIACGSNYSAAICLHKWVSS 632
++ KD K++ NY +H+W ++
Sbjct: 879 IQVQKDNREKFVEAYVNYIFNCSIHEWYTA 908
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 423 (154.0 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 111/346 (32%), Positives = 177/346 (51%)
Query: 265 LGTRADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
+G+ V++P P + D V +ACG H+ + GEV+T G + G+LGH +
Sbjct: 14 IGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--SE 71
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-DVSHWIPK 381
+P + +L + V CGE H+ A++ G++++WG G+ G LG T + + +P+
Sbjct: 72 GSKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSD--GQLGLTTIEDAVTVPR 129
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLS 440
I L + ++CG WH + + GQ FT+G ++G LG G + + P+ V+SL
Sbjct: 130 LIK-KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
G+ VA G H+ A+ S+S G +F WG +LG D+ R P V
Sbjct: 189 GIPLAQVAAGGAHSFAL----------SLS-GAVFGWGKNSSGQLGLSDERDRESPCHVK 237
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESV 559
L ++CG T LT SG VFT G+ GQLG+ + + ++ P V + L G V
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEV 296
Query: 560 EEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
+IACG +H +A + S +Y +G G G+LG G + K P+ V+
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 384 (140.2 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 105/322 (32%), Positives = 159/322 (49%)
Query: 307 WGEESGGRLGHGVGKDIV--QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+ G G ++ +P + + +V V CG H+ + GE+YT G T
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH 424
G LGH ++ S P + G L G + V CG H+ ++ GQ+F++G G+ G LG
Sbjct: 64 --GQLGHESEGSK--PAWV-GTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 425 GDRKN-VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
++ V+ PR ++ L+ + ++CG WH A+ + G+ FTWG
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA-----------ADGQFFTWGQNSYG 167
Query: 484 RLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + P + P V +L +VA G + + L+ SG VF G GQLG +
Sbjct: 168 QLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D + PC V+ L + V I+CG H AVLT V+T+G G+ G+LGH + D P
Sbjct: 228 RDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V IACG +++ A
Sbjct: 287 RVLELMGSEVSQIACGRHHTLA 308
Score = 348 (127.6 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 90/291 (30%), Positives = 150/291 (51%)
Query: 287 HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCGEF 345
H+ACG H+ ++ QG+VF+WG S G+LG +D V P L++ L ++ ++CG +
Sbjct: 88 HVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNW 147
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGLQVASVTCGPWHTAL 404
H A+ G+ +TWG ++ G LG G + S P+R+ L+G+ +A V G H+
Sbjct: 148 HCLALAADGQFFTWGQNSY--GQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFA 204
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
++ +G +F +G + G LG D ++ P V+ L + + ++CG HTA ++T+
Sbjct: 205 LSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTA-----VLTK 259
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT-TS 523
S G +FT+G G +LGH + P V L+ ++ACG T+ +S
Sbjct: 260 S------GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSS 313
Query: 524 GHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLA---GE-SVEEIACGAYHV 569
G ++ G GQLG + + K P V+ A G+ S + AC YH+
Sbjct: 314 GMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDAC-KYHI 363
Score = 300 (110.7 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 81/270 (30%), Positives = 130/270 (48%)
Query: 359 WGDGTHNAGLLGHGTDVSHWIPK-RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
WG + G G G+++ IP+ ++ G + V V CG H+ + G+++T G
Sbjct: 4 WGYSSF--GQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
T G LGH S P V +L+G + VACG H+ A+ + G++F+W
Sbjct: 62 TKGQLGH--ESEGSKPAWVGTLAGQHIVHVACGESHSVALSD-----------QGQVFSW 108
Query: 478 GDGDKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQ 536
G G +LG E + P + L +++CG+ + L G FT G YGQ
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Query: 537 LG-NPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
LG + P V+ L G + ++A G H L+ V+ WGK ++G+LG D
Sbjct: 169 LGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE 227
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAAI 624
DR++P V+ L+ + V YI+CG ++A +
Sbjct: 228 RDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 281 (104.0 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 77/252 (30%), Positives = 121/252 (48%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG AG+D + V +PR ++ + I+CG H +
Sbjct: 103 GQVFSWG---------AGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153
Query: 300 RQGEVFTWGEESGGRLGHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
G+ FTWG+ S G+LG +GK+ P ++SL + V G H+ A++++G +
Sbjct: 154 ADGQFFTWGQNSYGQLG--LGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
+ WG +++G LG + P + L +V ++CG HTA++T +G +FTFG
Sbjct: 212 FGWGK--NSSGQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFT 476
G+ G LGH + PR V L G +ACG HT A V SSG ++
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVP----------SSGMIYA 318
Query: 477 WGDGDKNRLGHG 488
+G G + +LG G
Sbjct: 319 FGCGTRGQLGTG 330
Score = 45 (20.9 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 603 VEALKDRHVKYIACGSNYSAAICLHKWVSS 632
++ KD K++ NY +H+W ++
Sbjct: 879 IQVQKDNREKFVEAYVNYIFNCSIHEWYTA 908
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 391 (142.7 bits), Expect = 4.2e-35, P = 4.2e-35
Identities = 111/368 (30%), Positives = 177/368 (48%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVD----FVTCG 343
+ACG H +T VF G G+LG D V+ H ++ L ++ +D ++ G
Sbjct: 87 VACGGAHTLFLTETRRVFATGLNDCGQLGVS---D-VKSHAMDPLEVSGLDKDILHISAG 142
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI--PKRISGPLEGLQVASVTCGPWH 401
+H+ A+T+ GELY WG +++G LG G + + P ++ L G+ + SV G H
Sbjct: 143 YYHSAAITVDGELYMWGK--NSSGQLGLGKKAARVVRVPTKVEA-LHGITIQSVALGSEH 199
Query: 402 TALITSTGQLFTFGDGTFGVLGHGD--------RKNVSY-PREVESLSGLRTIAVACGVW 452
+ +T G++ ++G G G LGHG R N + PR ++ L G++ VA G+
Sbjct: 200 SVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLL 259
Query: 453 HTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC 512
H+A E +G F +G+ N++G G P+ + + Y +VAC
Sbjct: 260 HSACTDE-----------NGSAFMFGEKSINKMGFGGVRNATTPSIISE-VPYA-EEVAC 306
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACGAYHVAV 571
G T +T G ++T GS G LG + P VE +V +++CG H A
Sbjct: 307 GGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAA 366
Query: 572 LTSRNEVYTWGKGAN------------GRLGHGDVEDRKTPALVEALKDRHVKYIACGSN 619
+ S N V+TWG G + G+LGHG D PA+V+ K+ +I+CG N
Sbjct: 367 I-SDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFN 425
Query: 620 YSAAICLH 627
++AA+ H
Sbjct: 426 HTAAVLEH 433
Score = 315 (115.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 98/332 (29%), Positives = 148/332 (44%)
Query: 307 WGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
WG GRLG G P + +L+ S+ V CG HT +T ++ G ++
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFA--TGLNDC 111
Query: 367 GLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 425
G LG SH + P +SG L+ + ++ G +H+A IT G+L+ +G + G LG G
Sbjct: 112 GQLGVSDVKSHAMDPLEVSG-LDK-DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLG 169
Query: 426 DR--KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
+ + V P +VE+L G+ +VA G H+ AV + G++ +WG G
Sbjct: 170 KKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD-----------GGEVLSWGGGGSG 218
Query: 484 RLGHGDKEP-----RLKPTCVPALID----YNFHKVACGHSLTVGLTTSGHVFTMGSTVY 534
RLGHG + R P LI VA G + +G F G
Sbjct: 219 RLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSI 278
Query: 535 GQLGNPNA-DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGD 593
++G + P ++ + EE+ACG YH V+T E+YTWG NG LG
Sbjct: 279 NKMGFGGVRNATTPSIISEV---PYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDS 335
Query: 594 VEDRKTPALVEA-LKDRHVKYIACGSNYSAAI 624
+P VE + V ++CG ++AAI
Sbjct: 336 TYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367
Score = 302 (111.4 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 97/325 (29%), Positives = 152/325 (46%)
Query: 276 PLE-SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VGKDIVQPHLLESL 332
PLE S + D+ HI+ G H+A +T GE++ WG+ S G+LG G + + P +E+L
Sbjct: 126 PLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEAL 185
Query: 333 TMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS---------HWIPKRI 383
++ V G H+ AVT GE+ +WG G +G LGHG S + P+ I
Sbjct: 186 HGITIQSVALGSEHSVAVTDGGEVLSWGGG--GSGRLGHGHQSSLFGILRSNSEFTPRLI 243
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
LEG++V +V G H+A G F FG+ + +G G +N + P + +
Sbjct: 244 K-ELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAE 302
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA-L 502
VACG +HT +VT+ G+L+TWG + LG P V
Sbjct: 303 E--VACGGYHTC-----VVTRG------GELYTWGSNENGCLGTDSTYVSHSPVRVEGPF 349
Query: 503 IDYNFHKVACGHSLTVGLTTSGHVFTMG------------STVYGQLGN-PNADGKLPCL 549
++ +V+CG T ++ + +VFT G + GQLG+ + D P +
Sbjct: 350 LESTVSQVSCGWKHTAAISDN-NVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAM 408
Query: 550 VEDKLAGESVE--EIACGAYHVAVL 572
V+ G++V I+CG H A +
Sbjct: 409 VD---LGKNVRAVHISCGFNHTAAV 430
Score = 236 (88.1 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 82/292 (28%), Positives = 126/292 (43%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G++Y+WG+ ++ + G K R V +P +E+ + + +A G H+ VT
Sbjct: 153 GELYMWGK---NSSGQLGLGKKA----ARV-VRVPTKVEALHGITIQSVALGSEHSVAVT 204
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIV---------QPHLLESLTMTSVDFVTCGEFHTCAV 350
GEV +WG GRLGHG + P L++ L V V G H+
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACT 264
Query: 351 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQ 410
G + +G+ + N +G G + P IS E V CG +HT ++T G+
Sbjct: 265 DENGSAFMFGEKSINK--MGFGGVRNATTPSIIS---EVPYAEEVACGGYHTCVVTRGGE 319
Query: 411 LFTFGDGTFGVLGHGDRKNVSY-PREVESLSGLRTIA-VACGVWHTAAVVEVIVTQSSAS 468
L+T+G G LG D VS+ P VE T++ V+CG HTAA+ + V
Sbjct: 320 LYTWGSNENGCLGT-DSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWG 378
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGL 520
S G G +LGHG +P V + ++CG + T +
Sbjct: 379 GSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAV 430
Score = 232 (86.7 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 58/161 (36%), Positives = 82/161 (50%)
Query: 468 SVSSGKLFT--WGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
S SGK F WG GD RLG G+ + + P AL D++ VACG + T+ LT +
Sbjct: 43 SSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRR 102
Query: 526 VFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
VF G GQLG + +E + + I+ G YH A +T E+Y WGK +
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNS 162
Query: 586 NGRLGHGDVEDR--KTPALVEALKDRHVKYIACGSNYSAAI 624
+G+LG G R + P VEAL ++ +A GS +S A+
Sbjct: 163 SGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV 203
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 416 (151.5 bits), Expect = 4.3e-35, P = 4.3e-35
Identities = 107/339 (31%), Positives = 172/339 (50%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE 330
+L P + V +ACG RH +T G+V+ G +LGH + +P L+
Sbjct: 28 ILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIP 85
Query: 331 SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSH-WIPKRISGPLEG 389
L + + CG H+ A++ G++ +WGD ++ G LGH TD +PK + L
Sbjct: 86 ELQDYVIIQICCGSRHSLALSDWGQVLSWGD--NDCGQLGHATDKEIVQLPKVVR-QLVT 142
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG---HGDRKNVSYPREVESLSGLRTIA 446
V + CG H+ +TS G+L+++G +G LG D + +YP + +L G+ A
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAA 202
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+ACG H+ + + SG +F WG + +LG D+ R PT + L
Sbjct: 203 IACGGNHSFLISK-----------SGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG 251
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP-NADGKLPCLVEDKLAGESVEEIACG 565
VACG +V LT G VFT G+ YGQLG+ +++ LP +V + L G ++ ++ACG
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVME-LMGSTITQVACG 310
Query: 566 AYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
H +A++ SR VY +G G++G+LG + P +V
Sbjct: 311 NRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 375 (137.1 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 107/319 (33%), Positives = 162/319 (50%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A G VY G ++ + G D L T+ +L+P L+ V++ I CG RH+
Sbjct: 57 ATGKVYACGS---NDYSQLGHD-----LPTKRPLLIPE-LQDYVIIQ---ICCGSRHSLA 104
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
++ G+V +WG+ G+LGH K+IVQ P ++ L +V + CG H+ A+T GEL
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGEL 164
Query: 357 YTWGDGTHNAGLLGHGT--DVSHW-IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
Y+WG + G LG + D++H P R++ L G+ +A++ CG H+ LI+ +G +F
Sbjct: 165 YSWGSNIY--GQLGVNSPNDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFG 221
Query: 414 FGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
+G G LG D N SYP ++++L L VACG V +T + G
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG-----DEFSVFLT------NEGG 270
Query: 474 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS-GHVFTMGST 532
+FT G G +LGHG + P V L+ +VACG+ T+ L S G V+ G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 533 VYGQLGNPNADG-KLPCLV 550
GQLG + LP +V
Sbjct: 331 SSGQLGTRSTKSLMLPQVV 349
Score = 335 (123.0 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 97/329 (29%), Positives = 152/329 (46%)
Query: 303 EVFTWGEESGGRLGHGVGKD--IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
E++ WG S G+LG G +D I+ P + T+V V CG HT +T G++Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG 420
++ LGH D+ P I L+ + + CG H+ ++ GQ+ ++GD G
Sbjct: 66 SNDYSQ--LGH--DLPTKRPLLIP-ELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120
Query: 421 VLGHG-DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
LGH D++ V P+ V L + +ACG H+ A+ S G+L++WG
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT-----------SCGELYSWGS 169
Query: 480 GDKNRLGHGDKEPRLK---PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQ 536
+LG P + L+ +ACG + + ++ SG VF G GQ
Sbjct: 170 NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229
Query: 537 LG-NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE 595
LG N + P ++ L V +ACG LT+ V+T G GA G+LGHG
Sbjct: 230 LGLNDETNRSYPTQLKT-LRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSS 288
Query: 596 DRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ P +V L + +ACG+ ++ A+
Sbjct: 289 NEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 243 (90.6 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 63/172 (36%), Positives = 93/172 (54%)
Query: 469 VSSGK-LFTWGDGDKNRLGHG--DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
++SGK L+ WG +LG G + E L P+ +P D +VACGH T+ LT +G
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 526 VFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
V+ GS Y QLG+ + K P L+ + L + +I CG+ H L+ +V +WG
Sbjct: 61 VYACGSNDYSQLGH-DLPTKRPLLIPE-LQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 586 NGRLGHG-DVEDRKTPALVEALKDRHVKYIACGSNYSAAI--C--LHKWVSS 632
G+LGH D E + P +V L + V IACG+N+S A+ C L+ W S+
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSN 170
Score = 161 (61.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/148 (31%), Positives = 73/148 (49%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG C + G + N R+ P L++ L V +ACG + +T
Sbjct: 217 GAVFGWGRNNCGQL---GLNDETN----RS---YPTQLKTLRTLGVRFVACGDEFSVFLT 266
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCA-VTMAGELYT 358
+G VFT G + G+LGHG + + P ++ L +++ V CG HT A V G +Y
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGP 386
+G G+ +G LG + S +P+ + GP
Sbjct: 327 FGLGS--SGQLGTRSTKSLMLPQVVIGP 352
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 415 (151.1 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 115/352 (32%), Positives = 177/352 (50%)
Query: 265 LGTRADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
+ T ++ P + D V +ACG H+ + GEV+T G + G+LGH ++
Sbjct: 14 ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--RE 71
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG-HGTDVSHWIPK 381
+P + +L + V CGE H+ A++ G+L++WG G+ G LG T+ S +P+
Sbjct: 72 GNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD--GQLGLMTTEDSVAVPR 129
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLS 440
I L + V+CG WH + + GQ FT+G + G LG G + + + P+ V SL
Sbjct: 130 LIQ-KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLE 188
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
G+ VA G H+ A+ S+S G +F WG + +LG D+E R P V
Sbjct: 189 GIPLAQVAAGGAHSFAL----------SLS-GAVFGWGMNNAGQLGLSDEEDRESPCHVK 237
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESV 559
L ++CG T LT SG VFT G+ GQLG+ + + ++ P V + L G V
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEV 296
Query: 560 EEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH 610
+IACG H +A + S +Y +G GA G+LG G + K P+ V+ H
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAH 348
Score = 375 (137.1 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 106/322 (32%), Positives = 156/322 (48%)
Query: 307 WGEESGGRLGHGVGKD--IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+ G + +P + ++ SV V CG H+ + GE+YT G T
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG- 423
G LGH + + P++I G L + V CG H+ ++ GQLF++G G+ G LG
Sbjct: 64 --GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 424 HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
+V+ PR ++ L+ + V+CG WH A+ + G+ FTWG
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA-----------ADGQFFTWGKNSHG 167
Query: 484 RLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + P + P V +L +VA G + + L+ SG VF G GQLG +
Sbjct: 168 QLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D + PC V+ L + V I+CG H AVLT V+T+G G+ G+LGH + D P
Sbjct: 228 EDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V IACG ++ A
Sbjct: 287 RVLELMGSEVTQIACGRQHTLA 308
Score = 347 (127.2 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 89/290 (30%), Positives = 147/290 (50%)
Query: 275 RPLESNVVLDVH--HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLES 331
+P + + D H H+ACG H+ ++ +G++F+WG S G+LG +D V P L++
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 332 LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGL 390
L ++ V+CG +H A+ G+ +TWG +H G LG G + S P+R+ LEG+
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEYPSQASPQRVRS-LEGI 190
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
+A V G H+ ++ +G +F +G G LG D ++ P V+ L + + ++CG
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
HTA ++T+S G +FT+G G +LGH + P V L+ ++
Sbjct: 251 EEHTA-----VLTKS------GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299
Query: 511 ACGHSLTVGLT-TSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLAGES 558
ACG T+ +SG ++ G GQLG + + K P V+ A S
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHS 349
Score = 297 (109.6 bits), Expect = 6.5e-22, Sum P(2) = 6.5e-22
Identities = 76/236 (32%), Positives = 117/236 (49%)
Query: 256 AGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
AG+D + + T V +PR ++ + ++CG H + G+ FTWG+ S G+L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 316 GHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +GK+ P + SL + V G H+ A++++G ++ WG +NAG LG
Sbjct: 170 G--LGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG--MNNAGQLGLS 225
Query: 373 TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
+ P + L +V ++CG HTA++T +G +FTFG G+ G LGH +
Sbjct: 226 DEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
PR V L G +ACG HT A V SSG ++ +G G K +LG G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVP----------SSGLIYAFGCGAKGQLGTG 330
Score = 279 (103.3 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 77/267 (28%), Positives = 126/267 (47%)
Query: 362 GTHNAGLLGHGTDVSHWIPK-RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG 420
G + G G T++ + + ++ G + V V CG H+ + G+++T G T G
Sbjct: 5 GYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64
Query: 421 VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
LGH +R+ + P ++ +L+ + VACG H+ A+ + G+LF+WG G
Sbjct: 65 QLGH-EREG-NKPEQIGALADQHIVHVACGESHSLALSD-----------RGQLFSWGAG 111
Query: 481 DKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG- 538
+LG E + P + L +V+CG+ + L G FT G +GQLG
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 539 -NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
P V L G + ++A G H L+ V+ WG G+LG D EDR
Sbjct: 172 GKEYPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDR 230
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAI 624
++P V+ L+ + V YI+CG ++A +
Sbjct: 231 ESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 50 (22.7 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 588 RLGHGDVEDRKT-PA--LVEALKDRHVKYIACGSNYSAAICLHKWVSS 632
R +G +E +K P V KD +++ NY I +H+W ++
Sbjct: 861 RESYGVIEQKKLIPGGDKVTVCKDNRQEFVDAYVNYVFQISVHEWYTA 908
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 412 (150.1 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 115/352 (32%), Positives = 176/352 (50%)
Query: 265 LGTRADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
+ T ++ P + D V +ACG H+ + GEV+T G + G+LGH ++
Sbjct: 14 ISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHE--RE 71
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG-HGTDVSHWIPK 381
+P + +L + V CGE H+ A++ G+L++WG G+ G LG T+ S +P+
Sbjct: 72 GNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSD--GQLGLMTTEESVAVPR 129
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLS 440
I L + V+CG WH + + GQ FT+G + G LG G + + P+ V SL
Sbjct: 130 LIQ-KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
G+ VA G H+ A+ S+S G +F WG + +LG D+E R P V
Sbjct: 189 GIPLAQVAAGGAHSFAL----------SLS-GAVFGWGMNNAGQLGLSDEEDRESPCHVK 237
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESV 559
L ++CG T LT SG VFT G+ GQLG+ + + ++ P V + L G V
Sbjct: 238 LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEV 296
Query: 560 EEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH 610
+IACG H +A + S +Y +G GA G+LG G + K P+ V+ H
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAH 348
Score = 377 (137.8 bits), Expect = 7.1e-31, P = 7.1e-31
Identities = 106/322 (32%), Positives = 157/322 (48%)
Query: 307 WGEESGGRLGHGVGKD--IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+ G + +P + ++ SV V CG H+ + GE+YT G T
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG- 423
G LGH + + P++I G L + V CG H+ ++ GQLF++G G+ G LG
Sbjct: 64 --GQLGHEREGNK--PEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 424 HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
++V+ PR ++ L+ + V+CG WH A+ + G+ FTWG
Sbjct: 119 MTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALA-----------ADGQFFTWGKNSHG 167
Query: 484 RLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + P + P V +L +VA G + + L+ SG VF G GQLG +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D + PC V+ L + V I+CG H AVLT V+T+G G+ G+LGH + D P
Sbjct: 228 EDRESPCHVK-LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V IACG ++ A
Sbjct: 287 RVLELMGSEVTQIACGRQHTLA 308
Score = 345 (126.5 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 88/290 (30%), Positives = 147/290 (50%)
Query: 275 RPLESNVVLDVH--HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLES 331
+P + + D H H+ACG H+ ++ +G++F+WG S G+LG ++ V P L++
Sbjct: 74 KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQK 133
Query: 332 LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGL 390
L ++ V+CG +H A+ G+ +TWG +H G LG G + S P+R+ LEG+
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 190
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
+A V G H+ ++ +G +F +G G LG D ++ P V+ L + + ++CG
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCG 250
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
HTA ++T+S G +FT+G G +LGH + P V L+ ++
Sbjct: 251 EEHTA-----VLTKS------GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299
Query: 511 ACGHSLTVGLT-TSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLAGES 558
ACG T+ +SG ++ G GQLG + + K P V+ A S
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHS 349
Score = 298 (110.0 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 75/236 (31%), Positives = 117/236 (49%)
Query: 256 AGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
AG+D + + T V +PR ++ + ++CG H + G+ FTWG+ S G+L
Sbjct: 110 AGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 316 GHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +GK+ P + SL + V G H+ A++++G ++ WG +NAG LG
Sbjct: 170 G--LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG--MNNAGQLGLS 225
Query: 373 TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
+ P + L +V ++CG HTA++T +G +FTFG G+ G LGH +
Sbjct: 226 DEEDRESPCHVK-LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
PR V L G +ACG HT A V SSG ++ +G G + +LG G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVP----------SSGLIYAFGCGARGQLGTG 330
Score = 276 (102.2 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 77/267 (28%), Positives = 126/267 (47%)
Query: 362 GTHNAGLLGHGTDVSHWIPK-RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG 420
G + G G T++ + + ++ G + V V CG H+ + G+++T G T G
Sbjct: 5 GYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKG 64
Query: 421 VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
LGH +R+ + P ++ +L+ + VACG H+ A+ + G+LF+WG G
Sbjct: 65 QLGH-EREG-NKPEQIGALADEHIVHVACGESHSLALSD-----------RGQLFSWGAG 111
Query: 481 DKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG- 538
+LG E + P + L +V+CG+ + L G FT G +GQLG
Sbjct: 112 SDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 539 -NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
P V L G + ++A G H L+ V+ WG G+LG D EDR
Sbjct: 172 GKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDR 230
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAI 624
++P V+ L+ + V YI+CG ++A +
Sbjct: 231 ESPCHVKLLRAQKVVYISCGEEHTAVL 257
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 410 (149.4 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 109/324 (33%), Positives = 169/324 (52%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
+ +ACG H+ + GEV+T G + G+LGH ++ +P + +L + V CGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
H+ A++ G+L++WG G+ G LG T+ S +P+ I L + V+CG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSD--GQLGLMTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 404 LITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
+ + GQ FT+G + G LG G + + P+ V SL G+ VA G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTT 522
S+S G +F WG + +LG D++ R P V L ++CG T LT
Sbjct: 206 -----SLS-GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259
Query: 523 SGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYH-VAVLTSRNEVYT 580
SG VFT G+ GQLG+ + + ++ P V + L G V +IACG H +A++ S +Y
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLE-LMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 581 WGKGANGRLGHGDVEDRKTPALVE 604
+G GA G+LG G + K P+ V+
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVK 342
Score = 377 (137.8 bits), Expect = 5.3e-31, P = 5.3e-31
Identities = 106/323 (32%), Positives = 157/323 (48%)
Query: 307 WGEESGGRLGHGVGKD--IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+ G + +P + ++ S+ V CG H+ + GE+YT G T
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG- 423
G LGH + + P++I G L + V CG H+ ++ GQLF++G G+ G LG
Sbjct: 64 --GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 424 HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
+V+ PR ++ L+ + V+CG WH A+ + G+ FTWG
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA-----------ADGQFFTWGKNSHG 167
Query: 484 RLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + P + P V +L +VA G + + L+ SG VF G GQLG +
Sbjct: 168 QLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D + PC V+ L + V I+CG H AVLT V+T+G G+ G+LGH V D P
Sbjct: 228 KDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAAI 624
V L V IACG ++ A+
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAL 309
Score = 356 (130.4 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 91/290 (31%), Positives = 148/290 (51%)
Query: 275 RPLESNVVLDVH--HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLES 331
+P + + D H H+ACG H+ ++ +G++F+WG S G+LG +D V P L++
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 332 LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGL 390
L ++ V+CG +H A+ G+ +TWG +H G LG G + S P+R+ LEG+
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVRS-LEGI 190
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
+A V G H+ ++ +G +F +G G LG D K+ P V+ L + + ++CG
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
HTA ++T+S G +FT+G G +LGH + P V L+ ++
Sbjct: 251 EEHTA-----VLTKS------GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQI 299
Query: 511 ACGHSLTVGLT-TSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLAGES 558
ACG T+ L +SG ++ G GQLG + + K P V+ A S
Sbjct: 300 ACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHS 349
Score = 298 (110.0 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 76/236 (32%), Positives = 118/236 (50%)
Query: 256 AGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
AG+D + + T V +PR ++ + ++CG H + G+ FTWG+ S G+L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 316 GHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +GK+ P + SL + V G H+ A++++G ++ WG +NAG LG
Sbjct: 170 G--LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG--MNNAGQLGLS 225
Query: 373 TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
+ P + L +V ++CG HTA++T +G +FTFG G+ G LGH +
Sbjct: 226 DEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
PR V L G +ACG HT A+V SSG ++ +G G K +LG G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLALVP----------SSGLIYAFGCGAKGQLGTG 330
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 382 (139.5 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 118/352 (33%), Positives = 173/352 (49%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQP----HLLE------SLTMT-------SVDF---VTC 342
++F+WG + G+LG G+ + + P +LL SL T S F ++C
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL-EGLQVASVTCGPWH 401
G FH+ +T+ G+L+ WG G + G LG G + S ++P PL E + + G H
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPNL--NPLFEEHSIRCIALGGLH 163
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
+ +T G +FT+G G FG LGH PR V+ + A+A HTAA+ E
Sbjct: 164 SVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE-- 221
Query: 462 VTQSSASVSSGKLFTWG--DGDKNRLGHGD-KEPR----LK-PTCVPALIDYNFHKVACG 513
SG+L+ WG +GD RLG G + P L P+ V AL V+CG
Sbjct: 222 ---------SGELYMWGREEGD-GRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCG 270
Query: 514 HSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYHVAVL 572
T+ LT G ++ G+ +LG N G P V L G + +IACG YH L
Sbjct: 271 GFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPS-LEGVRITQIACGGYHSLAL 329
Query: 573 TSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
T +V +WG G +G+LG + ++K P +EAL D+ + +IA G + SAAI
Sbjct: 330 TEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381
Score = 378 (138.1 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 108/353 (30%), Positives = 174/353 (49%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
I+CG+ H+ L T G+++ WG+ GGRLG G + P+L S+ + G H+
Sbjct: 106 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
A+T G+++TWG G G LGH +P+R+ + +++++ HTA IT
Sbjct: 165 VALTHQGDVFTWGYG--GFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 221
Query: 408 TGQLFTFG----DGTFGVLGHGDRKN----VSYPREVESLSGLRTIAVACGVWHTAAVVE 459
+G+L+ +G DG G LG G N +S P +V++L+ + +V+CG + T A+ +
Sbjct: 222 SGELYMWGREEGDGRLG-LGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK 279
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVG 519
G+L+ WG LG GD +P VP+L ++ACG ++
Sbjct: 280 -----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 328
Query: 520 LTTSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
LT G V + G +GQLG+ + + K+P +E LA + + IA G A +T E+
Sbjct: 329 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIE-ALADKKIVFIASGGSSSAAITDGGEL 387
Query: 579 YTWGKGANGRLG-HGDVEDRKTPALVEALKDRHV----KYIACGSNYSAAICL 626
+ WG + +LG G E + TP V L + K I+ S A+CL
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCL 440
Score = 342 (125.4 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 107/352 (30%), Positives = 156/352 (44%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIAC---GVRHAA 296
GD++IWG+ G + + G V +P N + + H I C G H+
Sbjct: 119 GDLWIWGK---------GDGGRLGF-GQENSVFVPN---LNPLFEEHSIRCIALGGLHSV 165
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
+T QG+VFTWG G LGH V + P ++ + + HT A+T +GEL
Sbjct: 166 ALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGEL 225
Query: 357 YTWG--DGTHNAGL-LGHGTDVSHW--IPKRISGPLEGLQVASVTCGPWHTALITSTGQL 411
Y WG +G GL G G + +P ++ + VASV+CG + T +T GQL
Sbjct: 226 YMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQL 283
Query: 412 FTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS 471
+ +G + LG GD P V SL G+R +ACG +H+ A+ E
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE-----------E 332
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
GK+ +WG G +LG + PT + AL D +A G S + +T G ++ G+
Sbjct: 333 GKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGN 392
Query: 532 TVYGQLGNPNADG--KLPCLV-----EDKLAGESVEEIACGAYHVAVLTSRN 576
QLG P P V ED+ V I+ GA H L SR+
Sbjct: 393 AKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 444
Score = 187 (70.9 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 69/233 (29%), Positives = 106/233 (45%)
Query: 408 TGQLFTFGDGTFGVLGHGDRKNVSYPREVESL---SGLR-TIAVACG-VWHTAAVVEVIV 462
T QLF++G G G LG G + YP V +L S ++A G + ++ + +
Sbjct: 47 TLQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGI 106
Query: 463 TQS---SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVG 519
+ S G L+ WG GD RLG G + P P +++ +A G +V
Sbjct: 107 SCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVA 166
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
LT G VFT G +G LG+ +L P V+D + + IA H A +T E+
Sbjct: 167 LTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCK-ISAIATSGTHTAAITESGEL 225
Query: 579 YTWGKG-ANGRLGHG------DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
Y WG+ +GRLG G + P+ V+AL V ++CG ++ A+
Sbjct: 226 YMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGGFFTMAL 277
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 410 (149.4 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 114/352 (32%), Positives = 176/352 (50%)
Query: 265 LGTRADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
+ T ++ P + D V +ACG H+ + GEV+T G + G+LGH ++
Sbjct: 14 ISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--RE 71
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG-HGTDVSHWIPK 381
+P + +L + V CGE H+ A++ G+L++WG G+ G LG T+ S +P+
Sbjct: 72 GNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD--GQLGLMTTEDSVAVPR 129
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLS 440
I L + V+CG WH + + GQ FT+G + G LG G + + P+ V SL
Sbjct: 130 LIQ-KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE 188
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
G+ VA G H+ A+ S+S G +F WG + +LG D++ R P V
Sbjct: 189 GIPLAQVAAGGAHSFAL----------SLS-GAVFGWGMNNAGQLGLSDEKDRESPCHVK 237
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESV 559
L ++CG T LT SG VFT G+ GQLG+ + + ++ P V + L G V
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEV 296
Query: 560 EEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH 610
+IACG H +A + S +Y +G GA G+LG G + K P+ V+ H
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAH 348
Score = 373 (136.4 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 106/322 (32%), Positives = 156/322 (48%)
Query: 307 WGEESGGRLGHGVGKD--IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+ G + +P + ++ SV V CG H+ + GE+YT G T
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG- 423
G LGH + + P++I G L + V CG H+ ++ GQLF++G G+ G LG
Sbjct: 64 --GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 424 HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
+V+ PR ++ L+ + V+CG WH A+ + G+ FTWG
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA-----------ADGQFFTWGKNSHG 167
Query: 484 RLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + P + P V +L +VA G + + L+ SG VF G GQLG +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D + PC V+ L + V I+CG H AVLT V+T+G G+ G+LGH + D P
Sbjct: 228 KDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V IACG ++ A
Sbjct: 287 RVLELMGSEVTQIACGRQHTLA 308
Score = 351 (128.6 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 90/290 (31%), Positives = 147/290 (50%)
Query: 275 RPLESNVVLDVH--HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLES 331
+P + + D H H+ACG H+ ++ +G++F+WG S G+LG +D V P L++
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 332 LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGL 390
L ++ V+CG +H A+ G+ +TWG +H G LG G + S P+R+ LEG+
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 190
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
+A V G H+ ++ +G +F +G G LG D K+ P V+ L + + ++CG
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
HTA ++T+S G +FT+G G +LGH + P V L+ ++
Sbjct: 251 EEHTA-----VLTKS------GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299
Query: 511 ACGHSLTVGLT-TSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLAGES 558
ACG T+ +SG ++ G GQLG + + K P V+ A S
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHS 349
Score = 295 (108.9 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 75/236 (31%), Positives = 117/236 (49%)
Query: 256 AGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
AG+D + + T V +PR ++ + ++CG H + G+ FTWG+ S G+L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 316 GHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +GK+ P + SL + V G H+ A++++G ++ WG +NAG LG
Sbjct: 170 G--LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG--MNNAGQLGLS 225
Query: 373 TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
+ P + L +V ++CG HTA++T +G +FTFG G+ G LGH +
Sbjct: 226 DEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
PR V L G +ACG HT A V SSG ++ +G G + +LG G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVP----------SSGLIYAFGCGARGQLGTG 330
Score = 275 (101.9 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 77/267 (28%), Positives = 126/267 (47%)
Query: 362 GTHNAGLLGHGTDVSHWIPK-RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG 420
G + G G T++ + + ++ G + V V CG H+ + G+++T G T G
Sbjct: 5 GYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64
Query: 421 VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
LGH +R+ + P ++ +L+ I VACG H+ A+ + G+LF+WG G
Sbjct: 65 QLGH-EREG-NKPEQIGALADQHIIHVACGESHSLALSD-----------RGQLFSWGAG 111
Query: 481 DKNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG- 538
+LG E + P + L +V+CG+ + L G FT G +GQLG
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 539 -NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
P V L G + ++A G H L+ V+ WG G+LG D +DR
Sbjct: 172 GKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR 230
Query: 598 KTPALVEALKDRHVKYIACGSNYSAAI 624
++P V+ L+ + V YI+CG ++A +
Sbjct: 231 ESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 49 (22.3 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 588 RLGHGDVEDRKT-PA--LVEALKDRHVKYIACGSNYSAAICLHKWVSS 632
R +G +E +K P V KD +++ NY I +H+W ++
Sbjct: 861 RESYGVIEQKKLIPGGDNVTVCKDNRQEFVDAYVNYVFQISVHEWYTA 908
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 402 (146.6 bits), Expect = 6.6e-33, Sum P(2) = 6.6e-33
Identities = 110/330 (33%), Positives = 168/330 (50%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
V +ACG H+ + GEV+T G + G+LGH ++ +P + +L + V CGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLGHGT-DVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
H+ A++ G+L++WG G+ G LG T + S +P+ I L + V+CG WH
Sbjct: 94 SHSLALSDQGQLFSWGAGSD--GQLGLMTIEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 404 LITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
+ + GQ FT+G + G LG G + + P+ V SL G+ V G H+ A+
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL----- 205
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTT 522
S+S G +F WG + +LG D++ R P V L ++CG T LT
Sbjct: 206 -----SLS-GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259
Query: 523 SGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYH-VAVLTSRNEVYT 580
SG VFT G+ GQLG+ + + ++ P V + L G V +IACG H +A + S +Y
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 581 WGKGANGRLGHGDVEDRKTPALVEALKDRH 610
+G GA G+LG G + K P+ V+ H
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAH 348
Score = 366 (133.9 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 105/322 (32%), Positives = 155/322 (48%)
Query: 307 WGEESGGRLGHGVGKD--IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+ G + +P + ++ SV V CG H+ + GE+YT G T
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH 424
G LGH + + P++I G L + V CG H+ ++ GQLF++G G+ G LG
Sbjct: 64 --GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL 118
Query: 425 GD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
+V+ PR ++ L+ + V+CG WH A+ + G+ FTWG
Sbjct: 119 MTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA-----------ADGQFFTWGRNSHG 167
Query: 484 RLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN 541
+LG G + P + P V +L +V G + + L+ SG VF G GQLG +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
D + PC V+ L + V I+CG H AVLT V+T+G G+ G+LGH + D P
Sbjct: 228 KDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 602 LVEALKDRHVKYIACGSNYSAA 623
V L V IACG ++ A
Sbjct: 287 RVLELMGSEVTQIACGRQHTLA 308
Score = 352 (129.0 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 91/290 (31%), Positives = 147/290 (50%)
Query: 275 RPLESNVVLDVH--HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLES 331
+P + + D H H+ACG H+ ++ QG++F+WG S G+LG +D V P L++
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQK 133
Query: 332 LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGL 390
L ++ V+CG +H A+ G+ +TWG +H G LG G + S P+R+ LEG+
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSH--GQLGLGKEFPSQASPQRVRS-LEGI 190
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
+A V G H+ ++ +G +F +G G LG D K+ P V+ L + + ++CG
Sbjct: 191 PLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
HTA ++T+S G +FT+G G +LGH + P V L+ ++
Sbjct: 251 EEHTA-----VLTKS------GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299
Query: 511 ACGHSLTVGLT-TSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLAGES 558
ACG T+ +SG ++ G GQLG + + K P V+ A S
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHS 349
Score = 288 (106.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 74/236 (31%), Positives = 115/236 (48%)
Query: 256 AGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
AG+D + + V +PR ++ + ++CG H + G+ FTWG S G+L
Sbjct: 110 AGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQL 169
Query: 316 GHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G +GK+ P + SL + V G H+ A++++G ++ WG +NAG LG
Sbjct: 170 G--LGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWG--MNNAGQLGLS 225
Query: 373 TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
+ P + L +V ++CG HTA++T +G +FTFG G+ G LGH +
Sbjct: 226 DEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
PR V L G +ACG HT A V SSG ++ +G G + +LG G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAFVP----------SSGLIYAFGCGARGQLGTG 330
Score = 267 (99.0 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 71/246 (28%), Positives = 116/246 (47%)
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSG 441
++ G + V V CG H+ + G+++T G T G LGH +R+ + P ++ +L+
Sbjct: 26 QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-EREG-NKPEQIGALAD 83
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVP 500
+ VACG H+ A+ + G+LF+WG G +LG E + P +
Sbjct: 84 QHIVHVACGESHSLALSD-----------QGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQ 132
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKLPCLVEDKLAGES 558
L +V+CG+ + L G FT G +GQLG P V L G
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS-LEGIP 191
Query: 559 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGS 618
+ ++ G H L+ V+ WG G+LG D +DR++P V+ L+ + V YI+CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 619 NYSAAI 624
++A +
Sbjct: 252 EHTAVL 257
Score = 46 (21.3 bits), Expect = 6.6e-33, Sum P(2) = 6.6e-33
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 588 RLGHGDVEDRKT-PA--LVEALKDRHVKYIACGSNYSAAICLHKWVSS 632
R +G +E +K P V K+ +++ NY I +H+W ++
Sbjct: 861 RESYGVIEQKKLIPGGDKVTVCKENRQEFVDAYVNYVFQISVHEWYTA 908
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 390 (142.3 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 114/342 (33%), Positives = 172/342 (50%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGH-GVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
A G H+ L+ G V + G+ S G+LG G + QP + +L +V V+CG+ H+
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-EQPERIPALETLNVALVSCGKEHS 87
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGT-DVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
AV G ++ WG + G LG G + +IPK+I L G+++ V CG +H+ ++
Sbjct: 88 LAVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALS 144
Query: 407 STGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
GQ+F++G + G LG G + + P+ V SL G+ VA G H+ A+
Sbjct: 145 EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-------- 196
Query: 466 SASVSSGKLFTWGDGDKNRLG-HGDKEP--RLKPTCVPALIDYNFHKVACGHSLTVGLTT 522
S+S G F WG +L G+ P R KP + AL ++CG+ T LT
Sbjct: 197 --SLS-GTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 523 SGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYH-VAVLTSRNEVYT 580
G VFT G YGQLG+ P A+ + P LVE ++ G V +I CG+ H +A + + +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVE-RIEG-LVSQIDCGSDHTLAYIYTTGQVVS 311
Query: 581 WGKGAN--GRLGHGDVEDRKTPALVEA--LKDRHVKYIACGS 618
+G+G R H E LV A L D VK+I G+
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353
Score = 333 (122.3 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 101/341 (29%), Positives = 167/341 (48%)
Query: 248 VICDNVVKAGADKNVNYLGTRADVLLPRP--LESNVVLDVHHIACGVRHAALVTRQGEVF 305
++ D V++ D + LG + +P + + L+V ++CG H+ V +G VF
Sbjct: 38 LLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVF 97
Query: 306 TWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTH 364
WG S G+LG G K+ P +++L + V CG +H+ A++ G++++WG +H
Sbjct: 98 AWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSH 157
Query: 365 NAGLLGHGTDV-SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG 423
G LG G + S P+R+ LEG+ +A V G H+ ++ +G F +G + G L
Sbjct: 158 --GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLA 214
Query: 424 -HGDRKNVS-Y-PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
G+ V Y P + +L L ++++CG HTA ++TQ GK+FT+GD
Sbjct: 215 LSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTA-----VLTQD------GKVFTFGDN 263
Query: 481 DKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVG-LTTSGHV--FTMGSTVYGQL 537
+LGH + P V I+ ++ CG T+ + T+G V F G +
Sbjct: 264 SYGQLGHDPTAEKRGPQLVER-IEGLVSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRS 322
Query: 538 GNPNADGK-LPCLVEDK-LAGESVEEIACGAYHVAVLTSRN 576
+P A+ + CLV K LA V+ I G Y V TS++
Sbjct: 323 PHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQD 363
Score = 277 (102.6 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 68/223 (30%), Positives = 113/223 (50%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG + + G K ++ P+ +++ + + +ACG H+ ++
Sbjct: 94 GRVFAWGAA-SEGQLGIGEFKETTFI--------PKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 300 RQGEVFTWGEESGGRLGHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
G+VF+WG S G+LG +GK+ P + SL + V G H+ A++++G
Sbjct: 145 EDGQVFSWGTNSHGQLG--LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTS 202
Query: 357 YTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
+ WG + L G+ V + P I G L+ L V S++CG HTA++T G++FTFG
Sbjct: 203 FGWGSNSAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFG 261
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
D ++G LGH P+ VE + GL + + CG HT A +
Sbjct: 262 DNSYGQLGHDPTAEKRGPQLVERIEGLVS-QIDCGSDHTLAYI 303
Score = 241 (89.9 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 72/241 (29%), Positives = 107/241 (44%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
LQ AS G H+ L+ S G + + GD + G LG P + +L L V+C
Sbjct: 26 LQAAS---GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSC 82
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFH 508
G H+ AV G++F WG + +LG G+ KE P + L
Sbjct: 83 GKEHSLAVCH-----------KGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKII 131
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKLPCLVEDKLAGESVEEIACGA 566
+VACGH +V L+ G VF+ G+ +GQLG P V L G + ++A G
Sbjct: 132 QVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGG 190
Query: 567 YHVAVLTSRNEVYTWGKGANGRL---GHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+H L+ + WG + G+L G+ R P + ALK V I+CG ++A
Sbjct: 191 HHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAV 250
Query: 624 I 624
+
Sbjct: 251 L 251
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 388 (141.6 bits), Expect = 4.6e-32, P = 4.6e-32
Identities = 109/349 (31%), Positives = 172/349 (49%)
Query: 267 TRADVLLPRPLESNVVLD---VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
+ A V PR S V D + +ACG +H+ + G V+T G S G+LGH G
Sbjct: 18 SEASVFEPR---SCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGS- 73
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-DVSHWIPKR 382
+P L+ +L + V+CG+ H+ AV G+++ WG G + G LG GT + + +P+
Sbjct: 74 -RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAG--DGGQLGLGTAEEAVRVPRL 130
Query: 383 ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG--HGDRKNVSYPREVESLS 440
I E +++ V CG H ++ GQLF +G+ + G LG G+ +S P+ ++SL
Sbjct: 131 IKKLCEH-RISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS-PQPLKSLC 188
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
G+ ++ G H+ A+ SG +F WG +LG D++ R P +
Sbjct: 189 GIPLTQISAGGDHSFALS-----------FSGAVFGWGKNSAGQLGLNDEQDRAVPCHIK 237
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESV 559
L ++CG T LT G +FT G+ GQLG+ + + LP V + L G V
Sbjct: 238 FLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVME-LMGTEV 296
Query: 560 EEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALK 607
+IACG H +A + S +Y +G G+LG G K+P V ++
Sbjct: 297 SQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQ 345
Score = 379 (138.5 bits), Expect = 4.3e-31, P = 4.3e-31
Identities = 100/321 (31%), Positives = 150/321 (46%)
Query: 307 WGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN 365
WG G+LG G + + +P + V CG H+ + G +YT G +++
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCG--SNS 62
Query: 366 AGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 425
G LGH S P+ + G L+ +++ V+CG H+ + GQ+F +G G G LG G
Sbjct: 63 CGQLGHDKGGSR--PELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG 119
Query: 426 DRKN-VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNR 484
+ V PR ++ L R V CG H A+ + G+LF WG+ +
Sbjct: 120 TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK-----------DGQLFVWGENSSGQ 168
Query: 485 LGHGDKEPR-LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNA 542
LG G EP L P + +L +++ G + L+ SG VF G GQLG N
Sbjct: 169 LGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQ 228
Query: 543 DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPAL 602
D +PC ++ L + V I+CG H A LT ++T+G G+ G+LGH + P
Sbjct: 229 DRAVPCHIKF-LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRR 287
Query: 603 VEALKDRHVKYIACGSNYSAA 623
V L V IACG N++ A
Sbjct: 288 VMELMGTEVSQIACGRNHTLA 308
Score = 314 (115.6 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 80/265 (30%), Positives = 123/265 (46%)
Query: 362 GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV 421
G+ AG LG G + R +G + V CG H+ + G ++T G + G
Sbjct: 6 GSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQ 65
Query: 422 LGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
LGH K S P V +L + V+CG H+ AV E G++F WG GD
Sbjct: 66 LGHD--KGGSRPELVGALDAQKISGVSCGQAHSLAVNE-----------QGQVFAWGAGD 112
Query: 482 KNRLGHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP 540
+LG G E ++ P + L ++ +V CG+ + L+ G +F G GQLG
Sbjct: 113 GGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLG 172
Query: 541 NAD-GKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT 599
+ L L G + +I+ G H L+ V+ WGK + G+LG D +DR
Sbjct: 173 KGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV 232
Query: 600 PALVEALKDRHVKYIACGSNYSAAI 624
P ++ L+ + V YI+CG ++AA+
Sbjct: 233 PCHIKFLRSQKVVYISCGEEHTAAL 257
Score = 312 (114.9 bits), Expect = 7.4e-24, P = 7.4e-24
Identities = 92/303 (30%), Positives = 142/303 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRAD-VLLPRPLESNVVLDVHHIACGVRHAALV 298
G V+ WG AG + LGT + V +PR ++ + + CG H +
Sbjct: 103 GQVFAWG---------AGDGGQLG-LGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIAL 152
Query: 299 TRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
++ G++F WGE S G+LG G G+ + P L+SL + ++ G H+ A++ +G ++
Sbjct: 153 SKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVF 212
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG 417
WG ++AG LG + +P I L +V ++CG HTA +T G LFTFG+G
Sbjct: 213 GWGK--NSAGQLGLNDEQDRAVPCHIKF-LRSQKVVYISCGEEHTAALTKEGGLFTFGNG 269
Query: 418 TFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
+ G LGH +N PR V L G +ACG HT A V S+G ++ +
Sbjct: 270 SKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVP----------STGLIYAF 319
Query: 478 GDGDKNRLGHGDKEPRLKPTCV----PALIDYNFHKVACGHSLTVGLTTSG-HVFTMGST 532
G + +LG G + P V P I + + H + + G H F + ST
Sbjct: 320 GCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTE--HCTIAKIHSGGDHNFLLLST 377
Query: 533 VYG 535
V G
Sbjct: 378 VEG 380
Score = 275 (101.9 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 96/333 (28%), Positives = 153/333 (45%)
Query: 123 ISSGQGGRSKIDGWNDGGLYL-EDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISSP 181
+ G+G + G N L+L D T S S + + S PE+ +L+ S
Sbjct: 30 VFDGRGLKEVACG-NQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKISG 88
Query: 182 TSFQTEGSISVNSERSHV----ASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXX----AP 233
S S++VN E+ V A D + + G+ + RV
Sbjct: 89 VSCGQAHSLAVN-EQGQVFAWGAGDGGQLGL-GTAEEAVRVPRLIKKLCEHRISQVMCGN 146
Query: 234 DDCDAL---GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIAC 290
C AL G +++WGE ++ + G K L P+PL+S + + I+
Sbjct: 147 HHCIALSKDGQLFVWGE---NSSGQLGLGKG------EPSTLSPQPLKSLCGIPLTQISA 197
Query: 291 GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
G H+ ++ G VF WG+ S G+LG +D P ++ L V +++CGE HT A+
Sbjct: 198 GGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257
Query: 351 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTG 409
T G L+T+G+G+ G LGH + + +P+R+ L G +V+ + CG HT A + STG
Sbjct: 258 TKEGGLFTFGNGSK--GQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTG 314
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGL 442
++ FG T G LG G R + P V ++ L
Sbjct: 315 LIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 393 (143.4 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 110/365 (30%), Positives = 184/365 (50%)
Query: 274 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT 333
PR LE+ L + A G RH+ L+ V++ G+ S G+LG + +P +++L+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78
Query: 334 MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 393
+D V+CG+ H+ AV G ++TWG G+ +G ++S ++P +I+ L G+++
Sbjct: 79 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKINS-LAGIKII 136
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK-NVSYPREVESLSGLRTIAVACGVW 452
V+CG +H+ ++ GQ+F++G G LG G+ + + P++V+SL G+ VA G
Sbjct: 137 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 196
Query: 453 HTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL---GHGDKEPRLKPTCVPALIDYNFHK 509
H+ A+ S+ G F WG+ +L G+ KE KP + AL N
Sbjct: 197 HSFAL----------SLM-GTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVY 245
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYH 568
++CG+ T LT G VFT G + QL + G+ P L+E G V +I CG+YH
Sbjct: 246 ISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSYH 303
Query: 569 -VAVLTSRNEVYTWGKGAN--GRLGHGDVEDRKTPALVEA--LKDRHVKYIACGSNYS-A 622
+A + + +V + G+G + H + L+ A L D VK I G++ +
Sbjct: 304 TIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANFV 363
Query: 623 AICLH 627
C H
Sbjct: 364 TTCRH 368
Score = 305 (112.4 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 93/306 (30%), Positives = 153/306 (50%)
Query: 325 QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
QP LE+ T + GE H+ + +Y+ GD + G LG + S P+ I
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSR--GQLGQKSPQSTKRPEPIQ 75
Query: 385 GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY-PREVESLSGLR 443
L + + V+CG H+ + G++FT+G G+ G LG G+ K +S+ P ++ SL+G++
Sbjct: 76 A-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIK 134
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKPTCVPAL 502
I V+CG +H+ A+ E G++F+WG + +LG G+ + P V +L
Sbjct: 135 IIQVSCGHYHSLALSE-----------DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL 183
Query: 503 IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL---GNPNADGKL--PCLVEDKLAGE 557
+VA G + + L+ G F G+ GQL GN +A ++ P + L
Sbjct: 184 EGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN-SAKEQIYKPHSI-GALKTL 241
Query: 558 SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACG 617
+V I+CG H +VLT +V+T+G ++ +L H R P L+E + HV I CG
Sbjct: 242 NVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECG 300
Query: 618 SNYSAA 623
S ++ A
Sbjct: 301 SYHTIA 306
Score = 241 (89.9 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 62/222 (27%), Positives = 106/222 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADV-LLPRPLESNVVLDVHHIACGVRHAALV 298
G V+ WG AG++ + +G ++ +P + S + + ++CG H+ +
Sbjct: 99 GRVFTWG---------AGSEGQLG-IGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148
Query: 299 TRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
+ G+VF+WG G+LG G P ++SL + V G H+ A+++ G +
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSF 208
Query: 358 TWGDG-THNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
WG+ + L G+ + P I G L+ L V ++CG HT+++T GQ+FTFG
Sbjct: 209 GWGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 267
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
+ L H R P+ +E + G + CG +HT A V
Sbjct: 268 SSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 308
Score = 133 (51.9 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 471 SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMG 530
+G FTW G R +P + A K A G ++ L ++ V++ G
Sbjct: 6 AGMYFTWAPG------------RRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCG 53
Query: 531 STVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
GQLG + K P ++ L+ ++ ++CG H + + V+TWG G+ G+L
Sbjct: 54 DNSRGQLGQKSPQSTKRPEPIQ-ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 112
Query: 590 GHGDVEDRK-TPALVEALKDRHVKYIACGSNYSAAIC----LHKWVSSAE-QLQC--SAC 641
G G+ ++ P + +L + ++CG +S A+ + W S+ + QL + C
Sbjct: 113 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 172
Query: 642 RQA 644
QA
Sbjct: 173 SQA 175
Score = 43 (20.2 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 819 LSFSKSITDSLKKTNELLNQEVLKL 843
L K + L+KTN L+ EV K+
Sbjct: 565 LEMMKEVQKILEKTNSHLHNEVPKM 589
Score = 37 (18.1 bits), Expect = 5.2e-31, Sum P(2) = 5.2e-31
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 760 QAPSLLQLKDVVLTTAADLR 779
Q PSL LKD+ L +L+
Sbjct: 807 QKPSLEDLKDLSLLLGRNLQ 826
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 347 (127.2 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 102/345 (29%), Positives = 158/345 (45%)
Query: 256 AGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
+G D + LGT + L +++ +V + G R++ + G++FTWG G L
Sbjct: 12 SGEDGQLG-LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTL 70
Query: 316 GHGVG-KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN-AGLLGHGT 373
GH K P L++SL + G +H AV G Y WG + G
Sbjct: 71 GHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKD 130
Query: 374 DVSHWIPKRISGP---LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
+ + + I P + L V V G H+ ++T G ++T+G GD K +
Sbjct: 131 ETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPW----PPGDIKQI 186
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
S P V+ L +R IAV G +H A+ E G L+ WG+ + +LG GD
Sbjct: 187 SVPVRVQGLENVRLIAV--GAFHNLALKE-----------DGTLWAWGNNEYGQLGTGDT 233
Query: 491 EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG---NPNADGKLP 547
+PR P V L D +A G + LT G V+ G +G+LG N + LP
Sbjct: 234 QPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLP 293
Query: 548 CLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
V + LAGE + +++CG H LT ++++G+G +GRLG+G
Sbjct: 294 QKV-NLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 283 (104.7 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 87/326 (26%), Positives = 139/326 (42%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGT 363
V WG G+LG G ++ ++++L +V V G ++ A+ G+L+TWG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG--W 64
Query: 364 HNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG 423
+ G LGH + + L +++ G WH + G+ + +G +G G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 424 HGDRKNVSYPREVESLSGLRTIAVA--CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
K+ + R V R I + C T V T S G ++TWG
Sbjct: 125 EEPSKDET-GRPVR-----RDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQP- 177
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN 541
GD + P V L + V H+L L G ++ G+ YGQLG +
Sbjct: 178 ---WPPGDIKQISVPVRVQGLENVRLIAVGAFHNLA--LKEDGTLWAWGNNEYGQLGTGD 232
Query: 542 ADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE--DRK 598
+ P V+ L ++ +IA G +H LT+ EVY WG+G +GRLG GD + +
Sbjct: 233 TQPRSYPIPVQG-LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKM 291
Query: 599 TPALVEALKDRHVKYIACGSNYSAAI 624
P V L + ++CG +S A+
Sbjct: 292 LPQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 220 (82.5 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 66/204 (32%), Positives = 100/204 (49%)
Query: 276 PLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-M 334
P+ + +V IA G H + G ++ WG G+LG G + P ++ L +
Sbjct: 189 PVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDL 248
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD--VSHWIPKRISGPLEGLQV 392
T VD + G +H+ A+T GE+Y WG G H G LG G + S +P++++ L G +
Sbjct: 249 TLVD-IAAGGWHSTALTNEGEVYGWGRGEH--GRLGFGDNDKSSKMLPQKVN-LLAGEDI 304
Query: 393 ASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV---------------E 437
V+CG H+ +T G++F+FG G G LG+G + P E+ E
Sbjct: 305 IQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDE 364
Query: 438 SLSGLRTIA--VACGVWHTAAVVE 459
G + IA VACG HT A+VE
Sbjct: 365 EDDG-KWIAKHVACGGRHTLAIVE 387
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 56/182 (30%), Positives = 88/182 (48%)
Query: 321 KDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP 380
K I P ++ L +V + G FH A+ G L+ WG+ + G LG G P
Sbjct: 184 KQISVPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEY--GQLGTGDTQPRSYP 239
Query: 381 KRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVS--YPREVES 438
+ G L+ L + + G WH+ +T+ G+++ +G G G LG GD S P++V
Sbjct: 240 IPVQG-LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNL 298
Query: 439 LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTC 498
L+G I V+CG H+ A+ G++F++G GD RLG+G K +P
Sbjct: 299 LAGEDIIQVSCGGTHSVALTR-----------DGRIFSFGRGDHGRLGYGRKVTTGQPLE 347
Query: 499 VP 500
+P
Sbjct: 348 LP 349
Score = 167 (63.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 58/228 (25%), Positives = 100/228 (43%)
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
+ S + +G G G LG G + V++L +V G ++ A+ +
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICD----- 55
Query: 465 SSASVSSGKLFTWGDGDKNRLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
GKLFTWG + LGH + + P+ V +L + + A G + +
Sbjct: 56 ------DGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQ 109
Query: 524 GHVFTMGSTVYGQLGN-PNAD--GK---LPCLVEDKLAGE-SVEEIACGAYHVAVLTSRN 576
G + G YGQ G P+ D G+ ++ + A + +V ++A G H VLT
Sbjct: 110 GRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREG 169
Query: 577 EVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
V+TWG+ GD++ P V+ L++ V+ IA G+ ++ A+
Sbjct: 170 YVWTWGQP----WPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLAL 211
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 376 (137.4 bits), Expect = 8.9e-30, Sum P(2) = 8.9e-30
Identities = 109/367 (29%), Positives = 185/367 (50%)
Query: 274 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL-LESL 332
PR LE+ L + A G RH+ L+ V++ G+ S G+LG + +P +++L
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQAL 78
Query: 333 TMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQV 392
+ +D V+CG+ H+ AV G ++TWG G+ +G ++S ++P +I+ L G+++
Sbjct: 79 STVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKINS-LAGIKI 136
Query: 393 ASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK-NVSYPREVESLSGLRTIAVACGV 451
V+CG +H+ ++ GQ+F++G G LG G+ + + P++V+SL G+ VA G
Sbjct: 137 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 196
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL---GHGDKEPRL-KPTCVPALIDYNF 507
H+ A+ S+ G F WG+ +L G+ K ++ KP + AL N
Sbjct: 197 THSFAL----------SLM-GTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNV 245
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGA 566
++CG+ T LT G VFT G + QL + G+ P L+E G V +I CG+
Sbjct: 246 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGS 303
Query: 567 YH-VAVLTSRNEVYTWGKGAN--GRLGHGDVEDRKTPALVEA--LKDRHVKYIACGSNYS 621
YH +A + + +V + G+G + H + L+ A L D VK I G++ +
Sbjct: 304 YHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHAN 363
Query: 622 -AAICLH 627
C H
Sbjct: 364 FVTTCRH 370
Score = 317 (116.6 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 95/332 (28%), Positives = 155/332 (46%)
Query: 259 DKNVNYLGTRADVLLPRPLESNVVLDVHHI---ACGVRHAALVTRQGEVFTWGEESGGRL 315
D + LG ++ RP E L HI +CG H+ V QG VFTWG S G+L
Sbjct: 54 DNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 113
Query: 316 GHGVGKDI-VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD 374
G G K+I P + SL + V+CG +H+ A++ G++++WG ++ G LG G +
Sbjct: 114 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG--SNRQGQLGLGNN 171
Query: 375 V-SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVL---GHGDRKNV 430
+ S P+++ LEG+ +A V G H+ ++ G F +G+ G L G+ +
Sbjct: 172 LCSQASPQKVKS-LEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQ 230
Query: 431 SY-PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD 489
Y P + +L L + ++CG HT+ + E G++FT+G +L H
Sbjct: 231 IYKPHSIGALKTLNVVYISCGYEHTSVLTE-----------DGQVFTFGGSSSEQLQHSP 279
Query: 490 KEPRLKPTCVPALIDYNFHKVACGHSLTVGLT-TSGHVFTMG---STVYGQLGNPNADGK 545
+ R P + I + ++ CG T+ T+G V ++G S A
Sbjct: 280 RSGRGGPQLIEG-IGGHVSQIECGSYHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSD 338
Query: 546 LPCLVEDK-LAGESVEEIACGAYHVAVLTSRN 576
+ CL+ K L V++I GA+ V T R+
Sbjct: 339 VTCLLSAKDLVDIEVKDIFAGAHANFVTTCRH 370
Score = 309 (113.8 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 89/305 (29%), Positives = 147/305 (48%)
Query: 325 QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
QP LE+ T + GE H+ + +Y+ GD + G LG + S P+
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSR--GQLGQKSPQSTKRPEEPI 75
Query: 385 GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY-PREVESLSGLR 443
L + + V+CG H+ + G++FT+G G+ G LG G+ K +S+ P ++ SL+G++
Sbjct: 76 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIK 135
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKPTCVPAL 502
I V+CG +H+ A+ E G++F+WG + +LG G+ + P V +L
Sbjct: 136 IIQVSCGHYHSLALSE-----------DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL 184
Query: 503 IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGE----S 558
+VA G + + L+ G F G+ GQL K + + G +
Sbjct: 185 EGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLN 244
Query: 559 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGS 618
V I+CG H +VLT +V+T+G ++ +L H R P L+E + HV I CGS
Sbjct: 245 VVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGS 303
Query: 619 NYSAA 623
++ A
Sbjct: 304 YHTIA 308
Score = 237 (88.5 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 60/222 (27%), Positives = 103/222 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADV-LLPRPLESNVVLDVHHIACGVRHAALV 298
G V+ WG AG++ + +G ++ +P + S + + ++CG H+ +
Sbjct: 100 GRVFTWG---------AGSEGQLG-IGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 149
Query: 299 TRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
+ G+VF+WG G+LG G P ++SL + V G H+ A+++ G +
Sbjct: 150 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSF 209
Query: 358 TWGDG-THNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
WG+ + L G+ G L+ L V ++CG HT+++T GQ+FTFG
Sbjct: 210 GWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 269
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
+ L H R P+ +E + G + CG +HT A V
Sbjct: 270 SSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 310
Score = 43 (20.2 bits), Expect = 8.9e-30, Sum P(2) = 8.9e-30
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 819 LSFSKSITDSLKKTNELLNQEVLKL 843
L K + L+KTN L+ EV K+
Sbjct: 567 LEMMKEVQKILEKTNSHLHNEVPKM 591
Score = 37 (18.1 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 760 QAPSLLQLKDVVLTTAADLR 779
Q PSL LKD+ L +L+
Sbjct: 809 QKPSLEDLKDLSLLLGRNLQ 828
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 379 (138.5 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 113/341 (33%), Positives = 166/341 (48%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
I+CG H ALVT G++F +G + G+LG G + +P +++L V CG HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHG--TDVS--HWIPK-RISGPLEGLQVASVTCGPWHT 402
T G LY G +N G LG G D + H + GP++ L S T +
Sbjct: 101 LVFTSRGNLYACGG--NNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNT-----S 153
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
A +T G+L+ +GD + G +G G N P+EV G R V+CG +H+A V
Sbjct: 154 AALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTV--- 208
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHG-DKEPRLK-PTCVPALIDYNFHKVACGHSLTVGL 520
G L+T+G+ D +LG +K K P V + D +VACG TV L
Sbjct: 209 --------DGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVAL 259
Query: 521 TTSGHVFTMGSTVYGQLGNPNA--DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
T + V++ G +GQLG+ + +LP +VE G V+ ACG H A++T +
Sbjct: 260 TEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGR-VKHAACGENHTALITDNGLL 317
Query: 579 YTWGKGANGRLGHGDVE--DRKTPALVEALKDRHVKYIACG 617
YT+G G +G+LG G+ ++ P L D HV + CG
Sbjct: 318 YTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358
Score = 325 (119.5 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 93/289 (32%), Positives = 144/289 (49%)
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGP 399
++CG+ HT VT G+L+ +G ++N G LG GT + P + L+ +V CG
Sbjct: 41 ISCGDEHTALVTENGKLFMFG--SNNWGQLGLGTKTTVNKPTCVKA-LKSERVKLTACGR 97
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
HT + TS G L+ G G LG GD + + VE + I + +T+A +
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL- 156
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVG 519
TQ G+L+ WGD + ++G G + L P V + V+CG+ +
Sbjct: 157 ---TQD------GRLYMWGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYHSAF 205
Query: 520 LTTSGHVFTMGSTVYGQLGNPN---ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRN 576
+T G ++T G G+LG A+ K+P V D + V ++ACG H LT N
Sbjct: 206 VTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTD--IPDRVVQVACGGGHTVALTE-N 262
Query: 577 EVYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
EVY++G G G+LGHG + + + P +VE + VK+ ACG N++A I
Sbjct: 263 EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311
Score = 307 (113.1 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 104/355 (29%), Positives = 158/355 (44%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LGT+ V P +++ V ACG H + T +G ++ G + G+LG G D
Sbjct: 70 LGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRT 129
Query: 325 QPHLLESLTMTS-VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
HL+E + + G + A+T G LY WGD + G +G G + + P+ +
Sbjct: 130 SFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSE--GQIGLGKESNALTPQEV 187
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK--NVSYPREVESLSG 441
S G +V V+CG +H+A +T G L+TFG+ G LG K N P++V +
Sbjct: 188 S---VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD 244
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK--EPRLKPTCV 499
R + VACG HT A+ E +++++G G +LGHG E RL P V
Sbjct: 245 -RVVQVACGGGHTVALTE------------NEVYSFGLGQFGQLGHGTFIFESRL-PRVV 290
Query: 500 PALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKLPCLVEDKLAGE 557
ACG + T +T +G ++T G +G+LG N + + +
Sbjct: 291 EHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDY 350
Query: 558 SVEEIACGAYHVAVLTS-RNEVYTWGKGANGRLGHGDV-EDRKTPALVEALKDRH 610
V + CG H+ VL R E + + L DV ED + E L D H
Sbjct: 351 HVHSVTCGGCHMLVLAKPRTE-----RPDDLILEEDDVTEDYLEKSYTELLGDTH 400
Score = 239 (89.2 bits), Expect = 6.4e-14, Sum P(3) = 6.4e-14
Identities = 74/219 (33%), Positives = 108/219 (49%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +Y+WG DN ++ + LG ++ L P+ E +V V ++CG H+A VT
Sbjct: 160 GRLYMWG----DN-----SEGQIG-LGKESNALTPQ--EVSVGKRVFWVSCGYYHSAFVT 207
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT--MTSVDFVTCGEFHTCAVTMAGELY 357
G ++T+GE+ G+LG K + + + +T V V CG HT A+T E+Y
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEK-LANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEVY 265
Query: 358 TWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
++G G G LGHGT + +P+ + +G +V CG HTALIT G L+TFGD
Sbjct: 266 SFGLGQF--GQLGHGTFIFESRLPRVVEHFRKG-RVKHAACGENHTALITDNGLLYTFGD 322
Query: 417 GTFGVLGHGDRK--NVSYPREVESLSGLRTIAVACGVWH 453
G G LG G+ N P +V CG H
Sbjct: 323 GRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361
Score = 203 (76.5 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 67/221 (30%), Positives = 101/221 (45%)
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
I +G +FTFG F N +++ LR ++CG HTA V E
Sbjct: 9 IPESGAVFTFGKSKFA-------DNAPSKFWLKNDVPLR---ISCGDEHTALVTE----- 53
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
+GKLF +G + +LG G K KPTCV AL ACG + T+ T+ G
Sbjct: 54 ------NGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRG 107
Query: 525 HVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGK 583
+++ G GQLG + + + LVE ++ +A G+ A LT +Y WG
Sbjct: 108 NLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGD 167
Query: 584 GANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ G++G G + TP V K V +++CG +SA +
Sbjct: 168 NSEGQIGLGKESNALTPQEVSVGK--RVFWVSCGYYHSAFV 206
Score = 184 (69.8 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 49/132 (37%), Positives = 67/132 (50%)
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAY 567
+++CG T +T +G +F GS +GQLG P V+ L E V+ ACG
Sbjct: 40 RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVK-ALKSERVKLTACGRT 98
Query: 568 HVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL-KDRHVKYIACGSNYSAAIC- 625
H V TSR +Y G G+LG GD DR + LVE K +K +A GSN SAA+
Sbjct: 99 HTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQ 158
Query: 626 ---LHKWVSSAE 634
L+ W ++E
Sbjct: 159 DGRLYMWGDNSE 170
Score = 44 (20.5 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 711 GENKDRLDKSDLKLSKSAMPSNVDLIKQLDCKAAKQGKKAD 751
G +K R LKL + + + D +K+ + +Q ++ +
Sbjct: 606 GMDKSRAGSKSLKLKHTELMESSDKVKKQSTEKTQQNQEVE 646
Score = 43 (20.2 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 818 GLSFSKSITDSLK-KTNELLNQEVLKLRAQVESLRQRCEFQELELQKS 864
G+ S++ + SLK K EL+ + E +Q QE+E+Q+S
Sbjct: 606 GMDKSRAGSKSLKLKHTELMESSDKVKKQSTEKTQQN---QEVEVQRS 650
Score = 41 (19.5 bits), Expect = 6.4e-14, Sum P(3) = 6.4e-14
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 122 LISSGQGGRSKIDGWNDGGLYLEDSRDLTS 151
L+ + +G G N+G L L D D TS
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTS 130
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 363 (132.8 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 112/366 (30%), Positives = 184/366 (50%)
Query: 283 LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH-GVGKDIVQPHLLESLTMTSVDFVT 341
+++ A G RH+ L+ G+V + G+ G+LG G + +L VD V+
Sbjct: 23 VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVS 82
Query: 342 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-DVSHWIPKRISGPLEGLQVASVTCGPW 400
CG+ H+ AV G ++ WG G+ G LG G ++ IP +I L +++ V+CG +
Sbjct: 83 CGKEHSLAVCHKGRVFAWGAGSE--GQLGTGEFKETNLIPMKIK-TLNDIKIKQVSCGHY 139
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
H+ ++ GQ+F++G + G LG G + + + P+ V SL G+ VA G H+ A+
Sbjct: 140 HSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL-- 197
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLG-HGDKEP--RLKPTCVPALIDYNFHKVACGHSL 516
S+S G F WG + +L H + KP + AL + ++CG+
Sbjct: 198 --------SLS-GTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEH 248
Query: 517 TVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGESVEEIACGAYH-VAVLTS 574
TV LT +G VFT G YGQLG+ P A+ P LVE + G V +I CG+YH +A + +
Sbjct: 249 TVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG-IDG-LVSQIDCGSYHTLAYVYT 306
Query: 575 RNEVYTWGKGANGRLG--HGDV--EDRKTPALVEA--LKDRHVKYIACGSNYSAAICLHK 628
+V ++G+ + H + E+ L+ A L D VK+I G+ Y+ + ++
Sbjct: 307 TGKVVSFGREPTCKSSPTHPEALTENVDFTCLISADDLVDFQVKHIFAGT-YANFVTTYQ 365
Query: 629 WVSSAE 634
SS +
Sbjct: 366 NTSSTD 371
Score = 308 (113.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 101/345 (29%), Positives = 161/345 (46%)
Query: 248 VICDNVVKAGADKNVNYLGTRA---DVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEV 304
++ + V + D LG R L + + L V ++CG H+ V +G V
Sbjct: 38 LLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRV 97
Query: 305 FTWGEESGGRLGHGVGKDI-VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGT 363
F WG S G+LG G K+ + P +++L + V+CG +H+ A++ G++++WG +
Sbjct: 98 FAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWG--S 155
Query: 364 HNAGLLGHGTDV-SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVL 422
++ G LG G S P+R+ L+G+ +A V G H+ ++ +G F +G G L
Sbjct: 156 NSDGQLGLGKKFPSQASPQRVRS-LDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQL 214
Query: 423 G-HGDR-KNVSY-PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
H + SY P + +L L I ++CG HT V++TQ+ GK+FT+GD
Sbjct: 215 ALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHT-----VVLTQN------GKVFTFGD 263
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACG--HSLTVGLTTSGHVFTMGS--TVYG 535
+LGH + P V ID ++ CG H+L TT G V + G T
Sbjct: 264 NTYGQLGHSPTAEKSGPQLVEG-IDGLVSQIDCGSYHTLAYVYTT-GKVVSFGREPTCKS 321
Query: 536 QLGNPNA---DGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSRN 576
+P A + CL+ D L V+ I G Y V T +N
Sbjct: 322 SPTHPEALTENVDFTCLISADDLVDFQVKHIFAGTYANFVTTYQN 366
Score = 279 (103.3 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 74/225 (32%), Positives = 116/225 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG + + G K N L+P +++ + + ++CG H+ ++
Sbjct: 95 GRVFAWGAG-SEGQLGTGEFKETN--------LIPMKIKTLNDIKIKQVSCGHYHSLALS 145
Query: 300 RQGEVFTWGEESGGRLGHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
G+VF+WG S G+LG +GK P + SL + V G H+ A++++G
Sbjct: 146 EGGQVFSWGSNSDGQLG--LGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTS 203
Query: 357 YTWGDGTHNAGLLG-HGTDVS--HWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
+ WG +NAG L H +VS + P IS L+ L V ++CG HT ++T G++FT
Sbjct: 204 FGWG--RNNAGQLALHKNNVSGQSYKPYSISA-LKNLGVIYISCGYEHTVVLTQNGKVFT 260
Query: 414 FGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
FGD T+G LGH S P+ VE + GL + + CG +HT A V
Sbjct: 261 FGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS-QIDCGSYHTLAYV 304
Score = 250 (93.1 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 75/255 (29%), Positives = 117/255 (45%)
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH-GDRKNVSYPREVE 437
+ +R G L G+++ G H+ L+ S GQ+ + GD G LG G + +
Sbjct: 13 VSRRRVG-LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIR 71
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD-KEPRLKP 496
+L L V+CG H+ AV G++F WG G + +LG G+ KE L P
Sbjct: 72 ALETLHVDLVSCGKEHSLAVCH-----------KGRVFAWGAGSEGQLGTGEFKETNLIP 120
Query: 497 TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDK--- 553
+ L D +V+CGH ++ L+ G VF+ GS GQLG K P +
Sbjct: 121 MKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLG---LGKKFPSQASPQRVR 177
Query: 554 -LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG-H-GDVEDRK-TPALVEALKDR 609
L G + ++A G H L+ + WG+ G+L H +V + P + ALK+
Sbjct: 178 SLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNL 237
Query: 610 HVKYIACGSNYSAAI 624
V YI+CG ++ +
Sbjct: 238 GVIYISCGYEHTVVL 252
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 361 (132.1 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 106/369 (28%), Positives = 184/369 (49%)
Query: 264 YLGTRADVLLPRPLESNVV-LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
Y A PR L++ +++ A G H+ L+ V++ G+ S G+LG +
Sbjct: 2 YFSWAAGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS 61
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
+P +++L VD V+CG+ H+ AV G+++ WG G+ +G ++S ++P +
Sbjct: 62 TERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTK 120
Query: 383 ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSG 441
I L G+++ V+CG +H+ ++ G +F++G + G LG G + ++ + P++V+SL G
Sbjct: 121 IKA-LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEG 179
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL---GHGDKEPRLKPTC 498
+ VA G H+ A+ S++ G F WG +L G+ KE KP
Sbjct: 180 IPLAQVAAGGTHSFAL----------SLT-GTSFGWGSNRSGQLALSGNKVKEQIYKPHS 228
Query: 499 VPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGE 557
+ AL + + ++CG+ T LT G VFT G GQL +P + + P L+E G
Sbjct: 229 IGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG--IGG 286
Query: 558 SVEEIACGAYH-VAVLTSRNEVYTWGKG----ANGRLGHGDVEDRKTPALVEA--LKDRH 610
V +I C +YH +A + + +V + G+G +N E+ L+ A L D
Sbjct: 287 RVSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIE 346
Query: 611 VKYIACGSN 619
VK I G++
Sbjct: 347 VKDIFAGAH 355
Score = 308 (113.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 93/346 (26%), Positives = 161/346 (46%)
Query: 259 DKNVNYLGTRADVLLPRPLESNVVLDVHH--IACGVRHAALVTRQGEVFTWGEESGGRLG 316
D + LG R D RP + D+H ++CG H+ V +G+VF WG S G+LG
Sbjct: 48 DNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLG 107
Query: 317 HGVGKDI-VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV 375
G K+I P +++L + V+CG +H+ A++ G +++WG ++ G LG G +
Sbjct: 108 IGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG--RNSEGQLGLGKNS 165
Query: 376 -SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVL---GHGDRKNVS 431
S IP+++ LEG+ +A V G H+ ++ TG F +G G L G+ ++ +
Sbjct: 166 RSQAIPQKVKS-LEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIY 224
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
P + +L L I ++CG HTA + E G++FT+G +L +
Sbjct: 225 KPHSIGALKNLSVIYISCGYEHTAVLTE-----------EGQVFTFGGNSSGQLQPSPRS 273
Query: 492 PRLKPTCVPALIDYNFHKVACGHSLTVGLT-TSGHVFTMGSTVYGQLGNPN------ADG 544
+ P + I ++ C T+ T+G V ++G NP +
Sbjct: 274 GQRGPQLIEG-IGGRVSQIECASYHTIAYVYTTGQVVSLGRGP-SHTSNPTHQEAPAENS 331
Query: 545 KLPCLVE-DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
+ CL+ + L V++I GA H +T+R +T G + ++
Sbjct: 332 DITCLLAAEDLVDIEVKDIFAGA-HANFVTTRRVSHTRSTGVSMKI 376
Score = 297 (109.6 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 75/251 (29%), Positives = 125/251 (49%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P+R+ G+++ G H+ L+ S ++++ GD ++G LG ++ P +++L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTC 498
+ L V+CG H+ AV GK+F WG G + +LG G+ KE PT
Sbjct: 72 NDLHVDLVSCGKEHSVAVCH-----------KGKVFAWGAGSEGQLGIGEFKEISFMPTK 120
Query: 499 VPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGK-LPCLVEDKLAG 556
+ AL +V+CGH ++ L+ GHVF+ G GQLG N+ + +P V+ L G
Sbjct: 121 IKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEG 179
Query: 557 ESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL---GHGDVEDRKTPALVEALKDRHVKY 613
+ ++A G H L+ + WG +G+L G+ E P + ALK+ V Y
Sbjct: 180 IPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIY 239
Query: 614 IACGSNYSAAI 624
I+CG ++A +
Sbjct: 240 ISCGYEHTAVL 250
Score = 126 (49.4 bits), Expect = 0.00072, P = 0.00072
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 542 ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
A + P ++ +G + + A G +H +L S + VY+ G + G+LG + + P
Sbjct: 7 AGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE 66
Query: 602 LVEALKDRHVKYIACGSNYSAAICLHK 628
++AL D HV ++CG +S A+C HK
Sbjct: 67 PIQALNDLHVDLVSCGKEHSVAVC-HK 92
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 351 (128.6 bits), Expect = 6.0e-29, P = 6.0e-29
Identities = 96/293 (32%), Positives = 140/293 (47%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEF-HTCAVTMAGELY 357
T E+F G G LG G + ++P L+SLT + ++ G H T GE++
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF 121
Query: 358 TWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
TWG HNA LG+GT +P IS L QV V CG +H+ ++TS G++F +G
Sbjct: 122 TWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 417 GTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G +G G N PR V L + +ACG + AVV+ +G+++
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVD-----------TGEVY 227
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYG 535
WG +LG G + P V AL +VACG++ T+ LT G ++ G+ YG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 536 QLGNPNADGK---LPCLVE-DKLAGESVEEIACGAYHV-AVLTSRNEVYTWGK 583
QLG N + P +VE D++ +E AC + H A T VY WG+
Sbjct: 288 QLGTGNKSNQSYPTPVVVEKDRI----IEIAACHSAHTSAAKTQGGHVYMWGQ 336
Score = 332 (121.9 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 84/270 (31%), Positives = 132/270 (48%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTWGEESGGRLGHGV-GKD 322
+G + PR L+S + ++ G H L T GEVFTWG + +LG+G
Sbjct: 80 VGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHG 139
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
+V H+ +L+ V V CG +H+ +T GE++ WG +N+G +G G+ + IP+R
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPRR 197
Query: 383 ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGL 442
++G L+ V ++ CG + + TG+++ +G G LG G N P V +L G+
Sbjct: 198 VTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI 257
Query: 443 RTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
R VACG HT +++T G+++ WG +LG G+K + PT V
Sbjct: 258 RVQRVACGYAHT-----LVLTDE------GQIYAWGANSYGQLGTGNKSNQSYPTPVVVE 306
Query: 503 IDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
D AC HS + T GHV+ G
Sbjct: 307 KDRIIEIAAC-HSAHTSAAKTQGGHVYMWG 335
Score = 324 (119.1 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 108/341 (31%), Positives = 161/341 (47%)
Query: 309 EESGGRLGHGVGKDIVQPHLLESLTMTSVD----FVTCGEFH------TCAVTMAGE--L 356
EE G G GK VQ L SL M V F C E C AG L
Sbjct: 3 EEVPGFYGES-GKS-VQA-TLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVL 59
Query: 357 YTW-GD-----GTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPW-HTALITST 408
YT D GT+ +G LG G D+ I P+R+ L G ++AS++ G H L T+
Sbjct: 60 YTTVNDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDS-LTGKKIASLSYGSGPHIVLATTD 117
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
G++FT+G + LG+G + P + + LS + I VACG +H+ +++T
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS-----LVLT---- 168
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKE----PRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
S G++F WG + ++G G PR C+ + N +ACG ++ + +
Sbjct: 169 --SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMN---IACGQMCSMAVVDT 223
Query: 524 GHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G V+ G GQLG + + PC V L G V+ +ACG H VLT ++Y WG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVA-ALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Query: 583 KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ G+LG G+ ++ P V KDR ++ AC S +++A
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 236 (88.1 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 64/186 (34%), Positives = 97/186 (52%)
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA 501
L+ I AC V+ +A EV+ T +V+ ++F G LG GD + ++P + +
Sbjct: 42 LQLIRQAC-VFGSAGN-EVLYT----TVND-EIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94
Query: 502 LIDYNFHKVACGHSLTVGL-TTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESV 559
L ++ G + L TT G VFT G Y QLGN + G +PC + L+ + V
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGS 618
E+ACG+YH VLTS EV+ WG +G++G G ++ P V L+++ V IACG
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 619 NYSAAI 624
S A+
Sbjct: 215 MCSMAV 220
Score = 161 (61.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 53/188 (28%), Positives = 83/188 (44%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+V+ WG +N + G+ N R + L++ VV++ IACG + V
Sbjct: 171 GEVFAWGY---NNSGQVGSGSTANQPIPRR---VTGCLQNKVVMN---IACGQMCSMAVV 221
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
GEV+ WG G+LG G + P + +L V V CG HT +T G++Y W
Sbjct: 222 DTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGD-- 416
G ++ G LG G + P + + + + C HT A T G ++ +G
Sbjct: 282 GANSY--GQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWGQCR 338
Query: 417 GTFGVLGH 424
G +L H
Sbjct: 339 GQSVILPH 346
Score = 133 (51.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 37/137 (27%), Positives = 63/137 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY+WG + + G LG+ + P + + + V +ACG H ++T
Sbjct: 224 GEVYVWGY---NGNGQLG-------LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273
Query: 300 RQGEVFTWGEESGGRLGHG--VGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV-TMAGEL 356
+G+++ WG S G+LG G + P ++E + ++ C HT A T G +
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRI--IEIAACHSAHTSAAKTQGGHV 331
Query: 357 YTWGDGTHNAGLLGHGT 373
Y WG + +L H T
Sbjct: 332 YMWGQCRGQSVILPHHT 348
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 345 (126.5 bits), Expect = 7.0e-29, P = 7.0e-29
Identities = 92/323 (28%), Positives = 152/323 (47%)
Query: 276 PLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH-GVGKDIVQPHLLESLTM 334
P+E V ++ H+A V + G+V T G+ S GH + I +P L+E+L
Sbjct: 156 PIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKG 215
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QVA 393
T V G T ++ G YT G TH G LGHG + +PK + L+ + V
Sbjct: 216 TPCKQVAAGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVEF-LKTIGPVV 272
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLS--GLRTIAVACGV 451
+ GP + +T G +++FG G+ LGHG++++ PR +++ G+ + V+ G
Sbjct: 273 QIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGD 332
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
H A+ S+G+++TWG G LGHGD+ ++ P + L + +V
Sbjct: 333 EHAVALD-----------SNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVC 381
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPN---ADGKLPCLVEDKLAGESVEEIACGAYH 568
T L G ++ G +G LG P+ +D L V + L V +++ G YH
Sbjct: 382 ARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYH 441
Query: 569 VAVLTSRNEVYTWGKGANGRLGH 591
V+T R ++ +G +LGH
Sbjct: 442 TIVVTQRGRIFGFGDNERAQLGH 464
Score = 274 (101.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 91/316 (28%), Positives = 146/316 (46%)
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
+T Q E+F E + RL + + + Q + + + T G++HT + + ++Y
Sbjct: 76 LTTQKELFANCEGNWKRLFSFL-QSVEQSSDMVETSQGKMQIAT-GKYHTLLINNS-KVY 132
Query: 358 TWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
+ G +G+L HG++ + + I P QVA V+ H+A + +GQ+ T GD
Sbjct: 133 SCGVSL--SGVLAHGSETTQCVAFTPIEFPFPA-QVAQVSATQNHSAFVLQSGQVLTCGD 189
Query: 417 GTFGVLGHGDRKNVSY-PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
+ GH D + P+ VE+L G VA G+ T V +++ G +
Sbjct: 190 NSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFT-----VFLSRE------GHAY 238
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALIDYN-FHKVACGHSLTVGLTTSGHVFTMGSTVY 534
T G +LGHGD R P V L ++A G S + +T G V++ GS
Sbjct: 239 TCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSN 298
Query: 535 GQLGNPNADGKL-PCLVED-KLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
LG+ +L P +++ K G + ++ G H L S VYTWGKG G LGHG
Sbjct: 299 FCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHG 358
Query: 593 DVEDRKTPALVEALKD 608
D D+ TP ++ L +
Sbjct: 359 DENDKITPQVLVNLNN 374
Score = 267 (99.0 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 78/285 (27%), Positives = 131/285 (45%)
Query: 264 YLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
+L T + P+ +E+ +A G+ ++R+G +T G + G+LGHG D
Sbjct: 197 HLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDR 256
Query: 324 VQPHLLESL-TMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
P ++E L T+ V + G + AVT G +Y++G G++ LGHG P+
Sbjct: 257 PVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC--LGHGEQQDELQPRV 314
Query: 383 ISG-PLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSG 441
I +G+ + V+ G H + S G+++T+G G G LGHGD + P+ + +L+
Sbjct: 315 IQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA 501
+ V T +VE + + G L G D+ G DK L+P +
Sbjct: 375 CLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSL---GFPDR---GVSDKV--LRPRVLEC 426
Query: 502 LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL 546
L + +V+ G T+ +T G +F G QLG+ + G L
Sbjct: 427 LKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCL 471
Score = 257 (95.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 94/346 (27%), Positives = 148/346 (42%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFH 346
IA G H L+ +V++ G G L HG V +E V V+ + H
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNH 174
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI--PKRISGPLEGLQVASVTCGPWHTAL 404
+ V +G++ T GD + + GH D S I PK + L+G V G T
Sbjct: 175 SAFVLQSGQVLTCGDNSSHC--CGH-LDTSRPIFRPKLVEA-LKGTPCKQVAAGLHFTVF 230
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAVVEVIVT 463
++ G +T G T G LGHGD + P+ VE L + + +A G + AV T
Sbjct: 231 LSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAV-----T 285
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH--KVACGHSLTVGLT 521
Q G ++++G G LGHG+++ L+P + A H +V+ G V L
Sbjct: 286 QD------GSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALD 339
Query: 522 TSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTW 581
++G V+T G G LG+ + + K+ V L ++ VL +Y +
Sbjct: 340 SNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGF 399
Query: 582 GKGANGRLGHGD--VEDRKT-PALVEALKDRHVKYIACGSNYSAAI 624
G G LG D V D+ P ++E LK V ++ G ++ +
Sbjct: 400 GWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445
Score = 249 (92.7 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 74/238 (31%), Positives = 113/238 (47%)
Query: 266 GTRADVLLPRPLES-NVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
G D +P+ +E + V IA G + VT+ G V+++G S LGHG +D +
Sbjct: 251 GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDEL 310
Query: 325 QPHLLESLTMTSVDF--VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
QP ++++ + V+ G+ H A+ G +YTWG G G LGHG D + I +
Sbjct: 311 QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGY--CGALGHG-DENDKITPQ 367
Query: 383 ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR---KNVSYPREVESL 439
+ L V T ++ G L+ FG FG LG DR V PR +E L
Sbjct: 368 VLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECL 427
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
R V+ G++HT ++VTQ G++F +GD ++ +LGH L+PT
Sbjct: 428 KPHRVSQVSTGLYHT-----IVVTQR------GRIFGFGDNERAQLGHDSLRGCLEPT 474
Score = 187 (70.9 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 57/203 (28%), Positives = 89/203 (43%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNY-LGTRADVLLPRPLESNVVLDVH--HIACGVRH 294
A G Y+ +V G+ N G + D L PR +++ +H ++ G H
Sbjct: 275 AAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEH 334
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAG 354
A + G V+TWG+ G LGHG D + P +L +L V + T + G
Sbjct: 335 AVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGG 394
Query: 355 ELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
LY +G G + G G P R+ L+ +V+ V+ G +HT ++T G++F
Sbjct: 395 LLYGFGWMGFGSLGFPDRGVSDKVLRP-RVLECLKPHRVSQVSTGLYHTIVVTQRGRIFG 453
Query: 414 FGDGTFGVLGHGDRKNVSYPREV 436
FGD LGH + P E+
Sbjct: 454 FGDNERAQLGHDSLRGCLEPTEI 476
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 358 (131.1 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 102/338 (30%), Positives = 161/338 (47%)
Query: 287 HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFH 346
HI+CG H A+VT G+++ +G G+LG G + +P +++L CG H
Sbjct: 41 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNH 100
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
T T G +Y G + G LG G IS ++ + G + +A +T
Sbjct: 101 TLVYTEKGNVYAAGGNSE--GQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 158
Query: 407 STGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
GQLF +GD + G +G D+ VS P +V+ G +++CG +H+A +
Sbjct: 159 EDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGYYHSAFIT-------- 208
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL-IDYNFHKVACGHSLTVGLTTSGH 525
G+L+T+G+ + +LG ++ + P L I +KVACG TV LT +G
Sbjct: 209 ---GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG- 264
Query: 526 VFTMGSTVYGQLGNPNADGK--LPCLVEDKLAGESVEEIACGAYHVAVL--TSRNEVYTW 581
V+T G YGQLG+ K +P V+ L + + CG H AV+ T ++T+
Sbjct: 265 VYTFGLGQYGQLGHGTLLFKTSVPKSVKH-LRSHKIHNVTCGESHTAVIADTENGLMFTF 323
Query: 582 GKGANGRLGHGDVE--DRKTPALVEALKDRHVKYIACG 617
G G +G+LG G+ ++ PAL V +ACG
Sbjct: 324 GDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361
Score = 287 (106.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 87/294 (29%), Positives = 142/294 (48%)
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGP 399
++CG+ HT VT G+LY +G +++ G LG G+ + P + L+ + CG
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFG--SNDWGQLGLGSKNTVRKPTCVKA-LKPEKTKLAVCGR 98
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAVV 458
HT + T G ++ G + G LG GD + + + + I +A G + +AAV
Sbjct: 99 NHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 158
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV--PALIDYN--FHKVACGH 514
E G+LF WGD + ++G DK TCV P +D ++CG+
Sbjct: 159 E-----------DGQLFVWGDNSEGQIGLADK------TCVSVPCQVDVGKPVSSISCGY 201
Query: 515 SLTVGLTTSGHVFTMGSTVYGQLGN-PNA--DGKLPCLVEDKLAGESVEEIACGAYHVAV 571
+ +T G ++T G G+LG P + ++P V + E V ++ACG H V
Sbjct: 202 YHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIM--EKVNKVACGGEHTVV 259
Query: 572 LTSRNEVYTWGKGANGRLGHGDVEDRKT-PALVEALKDRHVKYIACGSNYSAAI 624
LT VYT+G G G+LGHG + + + P V+ L+ + + CG +++A I
Sbjct: 260 LTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI 312
Score = 280 (103.6 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 74/233 (31%), Positives = 116/233 (49%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
+ +A G +A VT G++F WG+ S G++G + P ++ V ++CG
Sbjct: 144 IKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVD--VGKPVSSISCGY 201
Query: 345 FHTCAVTMAGELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
+H+ +T GELYT+G+ + GLL S +P+ + G +E +V V CG HT
Sbjct: 202 YHSAFITGDGELYTFGEPENGKLGLLPEQLKNSR-VPQPVLGIME--KVNKVACGGEHTV 258
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRK-NVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
++T TG ++TFG G +G LGHG S P+ V+ L + V CG HTA +
Sbjct: 259 VLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI----- 312
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKE--PRLKPTCVPALIDYNFHKVACG 513
A +G +FT+GDG +LG G++ + P + + VACG
Sbjct: 313 ----ADTENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361
Score = 251 (93.4 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 71/218 (32%), Positives = 106/218 (48%)
Query: 243 YIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQG 302
Y V D + D + +G + P + +V V I+CG H+A +T G
Sbjct: 152 YTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDG 211
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLT--MTSVDFVTCGEFHTCAVTMAGELYTWG 360
E++T+GE G+LG + + + + + + M V+ V CG HT +T G +YT+G
Sbjct: 212 ELYTFGEPENGKLGL-LPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VYTFG 269
Query: 361 DGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTCGPWHTALITST--GQLFTFGDG 417
G + G LGHGT + +PK + L ++ +VTCG HTA+I T G +FTFGDG
Sbjct: 270 LGQY--GQLGHGTLLFKTSVPKSVKH-LRSHKIHNVTCGESHTAVIADTENGLMFTFGDG 326
Query: 418 TFGVLGHGDRK--NVSYPREVESLSGLRTIAVACGVWH 453
G LG G+ N P + + VACG H
Sbjct: 327 RHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCH 364
Score = 43 (20.2 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 1001 SESSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPG 1044
+E EG+ES ++ E G + E E +E+ E G
Sbjct: 602 AEEEEGEESQK-EEKEEGEEEKREQEEEEEGGEEEEEVEEVEEG 644
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 346 (126.9 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 96/293 (32%), Positives = 138/293 (47%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEF-HTCAVTMAGELY 357
T E+F G G LG G + ++P L+SL + ++ G H T GE++
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF 121
Query: 358 TWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
TWG HNA LG+GT +P IS L QV V CG +H+ ++TS G++F +G
Sbjct: 122 TWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 417 GTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
G +G G N PR V L + +ACG AVV+ +G+++
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD-----------TGEVY 227
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYG 535
WG +LG G+ + P V AL +VACG++ T+ LT G V+ G+ YG
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 536 QLGNPNADGK---LPCLVE-DKLAGESVEEIACGAYHV-AVLTSRNEVYTWGK 583
QLG N + P VE D++ +E AC + H A T VY WG+
Sbjct: 288 QLGTGNKSNQSYPTPVTVEKDRI----IEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 340 (124.7 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 90/273 (32%), Positives = 136/273 (49%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIAC---GVR-HAALVTRQGEVFTWGEESGGRLGHGV- 319
LG + PR L+S L+ IAC G H L T +GEVFTWG + +LG+G
Sbjct: 80 LGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTT 136
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI 379
+V H+ +L+ V V CG +H+ +T GE++ WG +N+G +G G+ V+ I
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPI 194
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P+R++G L+ V ++ CG + TG+++ +G G LG G+ N P V +L
Sbjct: 195 PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAAL 254
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 499
G+R VACG HT +++T G+++ WG +LG G+K + PT V
Sbjct: 255 QGIRVQRVACGYAHT-----LVLTDE------GQVYAWGANSYGQLGTGNKSNQSYPTPV 303
Query: 500 PALIDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
D AC HS + T GHV+ G
Sbjct: 304 TVEKDRIIEIAAC-HSTHTSAAKTQGGHVYMWG 335
Score = 321 (118.1 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 85/267 (31%), Positives = 134/267 (50%)
Query: 362 GTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPW-HTALITSTGQLFTFGDGTF 419
GT+ G LG G DV I P+R+ L G ++A ++ G H L T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLG-DVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 420 GVLGHGDRKNVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
LG+G + P + + LS + I VACG +H+ +++T S G++F WG
Sbjct: 129 SQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS-----LVLT------SDGEVFAWG 177
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFH-KVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+ ++G G + P V + +ACG + + +G V+ G GQL
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 538 GNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
G N+ + PC V L G V+ +ACG H VLT +VY WG + G+LG G+ +
Sbjct: 238 GLGNSGNQPTPCRVA-ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAA 623
+ P V KDR ++ AC S +++A
Sbjct: 297 QSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 253 (94.1 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 78/252 (30%), Positives = 119/252 (47%)
Query: 374 DVSHWIPKRISGPLEGLQVASVTC---GPWHTALITSTG-QLFTFGDGTFGVLGHGDRKN 429
DV W + E LQ+ C + L T+ ++F G G LG GD ++
Sbjct: 27 DVGKWPIFSLCSE-EELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQS 85
Query: 430 VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD 489
PR ++SL+G + +AC + + + + T+ G++FTWG ++LG+G
Sbjct: 86 TIEPRRLDSLNGKK---IACLSYGSGPHIVLATTE-------GEVFTWGHNAYSQLGNGT 135
Query: 490 KEPRLKPTCVPA-LIDYNFHKVACG--HSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK- 545
L P + L + +VACG HSL LT+ G VF G GQ+G+ + +
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLV--LTSDGEVFAWGYNNSGQVGSGSTVNQP 193
Query: 546 LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEA 605
+P V L + V IACG + EVY WG NG+LG G+ ++ TP V A
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAA 253
Query: 606 LKDRHVKYIACG 617
L+ V+ +ACG
Sbjct: 254 LQGIRVQRVACG 265
Score = 163 (62.4 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 54/188 (28%), Positives = 83/188 (44%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+V+ WG +N + G+ VN R + L++ VV+ IACG V
Sbjct: 171 GEVFAWGY---NNSGQVGSGSTVNQPIPRR---VTGCLQNKVVVT---IACGQMCCMAVV 221
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
GEV+ WG G+LG G + P + +L V V CG HT +T G++Y W
Sbjct: 222 DTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGD-- 416
G ++ G LG G + P ++ + + + C HT A T G ++ +G
Sbjct: 282 GANSY--GQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWGQCR 338
Query: 417 GTFGVLGH 424
G +L H
Sbjct: 339 GQSVILPH 346
Score = 133 (51.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 38/138 (27%), Positives = 60/138 (43%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY+WG + + G LG + P + + + V +ACG H ++T
Sbjct: 224 GEVYVWGY---NGNGQLG-------LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV-TMAGELYT 358
+G+V+ WG S G+LG G + P + ++ C HT A T G +Y
Sbjct: 274 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYM 333
Query: 359 WGDGTHNAGLLGHGTDVS 376
WG + +L H T S
Sbjct: 334 WGQCRGQSVILPHLTHFS 351
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 521 TTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAY-HVAVLTSRNEVY 579
T + +F +G+ G LG + + D L G+ + ++ G+ H+ + T+ EV+
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF 121
Query: 580 TWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGSNYSAAI 624
TWG A +LG+G P + L ++ V +ACGS +S +
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 346 (126.9 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 108/356 (30%), Positives = 175/356 (49%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A G RH+ L+ V + G+ S G+LG + P +++L VD V+CG+ H+
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
AV G ++ WG G+ +G ++S + PK+I L +++ V+CG +H+ ++
Sbjct: 89 AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKD 146
Query: 409 GQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
Q+F++G + G LG G + + P+ V SL G+ VA G H+ A+
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---------- 196
Query: 468 SVSSGKLFTWGDGDKNRLG-HGDKEP--RLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
S+ G F WG +L G P KP V AL + ++CG + T LT G
Sbjct: 197 SLC-GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG 255
Query: 525 HVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAYH-VAVLTSRNEVYTWG 582
VFT G GQLG +P + + P LVE ++ G V +I CG+YH +A + + +V ++G
Sbjct: 256 KVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG-LVSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 583 KGAN--GRLGHGDV--EDRKTPALVEA--LKDRHVKYIACGSNYSAAICLHKWVSS 632
G + + H + E+ L+ A D VK+I G+ Y+ + H+ SS
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT-YANFVTTHQDTSS 368
Score = 307 (113.1 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 103/348 (29%), Positives = 164/348 (47%)
Query: 253 VVKAGADKNVNYLGTRADVL--LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEE 310
V+ G D + LG R LP P+++ L V ++CG H+ V +G VF WG
Sbjct: 44 VLSCG-DNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAG 102
Query: 311 SGGRLGHGVGKDI-VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLL 369
S G+LG G K+I P + +L + V+CG +H+ A++ ++++WG +H G L
Sbjct: 103 SEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQL 160
Query: 370 GHGTDV-SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK 428
G G + S P+R+ LEG+ +A V G H+ ++ G F +G + G L R
Sbjct: 161 GLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR- 218
Query: 429 NV----SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNR 484
NV + P V +L L + ++CG HTA ++TQ GK+FT+GD +
Sbjct: 219 NVPVQSNKPLSVGALKNLGVVYISCGDAHTA-----VLTQD------GKVFTFGDNRSGQ 267
Query: 485 LGHGDKEPRLKPTCVPALIDYNFHKVACG--HSLTVGLTTSGHV--FTMGSTVYGQLGNP 540
LG+ + P V ID ++ CG H+L + T+G V F G + + +P
Sbjct: 268 LGYSPTPEKRGPQLVER-IDGLVSQIDCGSYHTLAY-VHTTGQVVSFGHGPSDTSKPTHP 325
Query: 541 NA---DGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
A + + CL+ + V+ I G Y V T ++ T G
Sbjct: 326 EALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQDTSSTRAPG 373
Score = 238 (88.8 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 73/260 (28%), Positives = 117/260 (45%)
Query: 372 GTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVS 431
G D S + +R + G ++ G H+ L+ + ++ + GD + G LG +
Sbjct: 6 GAD-SRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE 64
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD-K 490
P +++L L V+CG H+ AV G++F WG G + +LG G+ K
Sbjct: 65 LPEPIQALETLIVDLVSCGKEHSLAVCH-----------KGRVFAWGAGSEGQLGIGEFK 113
Query: 491 EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKLPC 548
E P + L D +V+CGH ++ L+ VF+ G +GQLG P
Sbjct: 114 EISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQ 173
Query: 549 LVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL---GHG-DVEDRKTPALVE 604
V L G + ++A G H L+ + WG + G+L G V+ K P V
Sbjct: 174 RVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNK-PLSVG 231
Query: 605 ALKDRHVKYIACGSNYSAAI 624
ALK+ V YI+CG ++A +
Sbjct: 232 ALKNLGVVYISCGDAHTAVL 251
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 342 (125.4 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 115/355 (32%), Positives = 170/355 (47%)
Query: 284 DVHHIACGVRHAALVTRQGEVFTWGEE----SGGRLGHGVGKDIVQPHL----LESLTMT 335
+V +A G A VTR G + W GG L G + QP LE +
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQ-PQPQFISRFLEGQSGV 391
Query: 336 SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG--TDVSHWIPKRISGPLEGLQVA 393
++ V CG+F T +T G + T+G G++ G LGHG TD+S P + L G ++
Sbjct: 392 TIKHVACGDFFTACLTDRGIIMTFGSGSN--GCLGHGSLTDISQ--PTIVEALL-GYEMV 446
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWH 453
V CG H +++ +LF +G G G LG G R++ S P++V G V CG+
Sbjct: 447 QVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-- 504
Query: 454 TAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG-----HGDKEPRLKPTCV-PALIDYN- 506
++++ + Q+ A S + G D LG H E L T + A +D
Sbjct: 505 DSSMILTVPGQALAC-GSNRFNKLGL-DHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEP 562
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACG 565
+ G + + +T SG +T GS +GQLG N + PC V+ L G + +ACG
Sbjct: 563 LLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACG 621
Query: 566 -AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH---VKYIAC 616
A+ VA+ + +EVY+WGKGA GRLG D ED P V+ L + H V ++C
Sbjct: 622 DAFTVAI-GAESEVYSWGKGARGRLGRRD-EDAGLPRPVQ-LDETHPYTVTSVSC 673
Score = 321 (118.1 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 88/296 (29%), Positives = 135/296 (45%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESL 332
+ R LE + + H+ACG A +T +G + T+G S G LGHG DI QP ++E+L
Sbjct: 381 ISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL 440
Query: 333 TMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQV 392
+ V CG H A++ EL+ WG G ++G LG GT SH P+++ P G +
Sbjct: 441 LGYEMVQVACGASHVLALSTERELFAWGRG--DSGRLGLGTRESHSCPQQVPMP-PGQEA 497
Query: 393 ASVTCGPWHTALITSTGQLFTFGDGTFGVLG--HGDRKNVSYP-REVESLSGLRTIAVAC 449
V CG + ++T GQ G F LG H P ++VE + A
Sbjct: 498 QRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAP 557
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHK 509
+++ S+A +SG +T+G +LG + P V L
Sbjct: 558 LDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAM 617
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
VACG + TV + V++ G G+LG + D LP V+ D+ +V ++C
Sbjct: 618 VACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673
Score = 314 (115.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 103/329 (31%), Positives = 145/329 (44%)
Query: 316 GHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAG---LLGHG 372
G G+G + P L T V V G VT +G L W AG LL
Sbjct: 318 GGGLGTPLRLPML-----NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGA 372
Query: 373 TDVSHWIPKRISGPLEG---LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN 429
+ P+ IS LEG + + V CG + TA +T G + TFG G+ G LGHG +
Sbjct: 373 VEQPQ--PQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTD 430
Query: 430 VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD 489
+S P VE+L G + VACG H A + T+ +LF WG GD RLG G
Sbjct: 431 ISQPTIVEALLGYEMVQVACGASHVLA----LSTER-------ELFAWGRGDSGRLGLGT 479
Query: 490 KEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPC 548
+E P VP +V CG ++ LT G GS + +LG + G+ P
Sbjct: 480 RESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPV 539
Query: 549 ---LVEDKLA----G------ESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE 595
VE+ L+ G E + I G H A +T+ + YT+G +G+LG
Sbjct: 540 PHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRR 599
Query: 596 DRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ P V+ L+ + +ACG ++ AI
Sbjct: 600 GSRAPCKVQGLEGIKMAMVACGDAFTVAI 628
Score = 244 (91.0 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 71/265 (26%), Positives = 119/265 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G+ D+ P +E+ + ++ +ACG H ++ + E+F WG GRLG G +
Sbjct: 426 GSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSC 485
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GL--LGHGTD-VSHW-IP 380
P + V CG + +T+ G+ G N GL L G + V H +
Sbjct: 486 PQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVE 545
Query: 381 KRIS------GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
+ +S PL+ + S+ G H+A +T++G +TFG G LG R+ P
Sbjct: 546 EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPC 605
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
+V+ L G++ VACG T A+ + ++++WG G + RLG D++ L
Sbjct: 606 KVQGLEGIKMAMVACGDAFTVAIG-----------AESEVYSWGKGARGRLGRRDEDAGL 654
Query: 495 -KPTCVPALIDYNFHKVACGHSLTV 518
+P + Y V+C H T+
Sbjct: 655 PRPVQLDETHPYTVTSVSCCHGNTL 679
Score = 177 (67.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG--H-GVGK 321
LGTR P+ + + + CG+ + ++T G+ G +LG H +G+
Sbjct: 477 LGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGE 536
Query: 322 DIVQPH--LLESLTMT-----SVD-----FVTCGEFHTCAVTMAGELYTWGDGTHNAGLL 369
+ V PH + E+L+ T +D + G H+ AVT +G+ YT+G H G L
Sbjct: 537 EPV-PHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQH--GQL 593
Query: 370 GHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN 429
G T P ++ G LEG+++A V CG T I + +++++G G G LG D ++
Sbjct: 594 GTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRD-ED 651
Query: 430 VSYPREVE 437
PR V+
Sbjct: 652 AGLPRPVQ 659
Score = 175 (66.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 49/166 (29%), Positives = 82/166 (49%)
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN---PNA-DGKLPCLVE 551
P +P +++ +VA G + G+T SG + + G G P A + P +
Sbjct: 324 PLRLP-MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS 382
Query: 552 DKLAGES---VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKD 608
L G+S ++ +ACG + A LT R + T+G G+NG LGHG + D P +VEAL
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLG 442
Query: 609 RHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNC 654
+ +ACG+++ A+ + + + + R G TR+ H+C
Sbjct: 443 YEMVQVACGASHVLALSTERELFAWGRGDSG--RLGLG-TRESHSC 485
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 346 (126.9 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 100/342 (29%), Positives = 163/342 (47%)
Query: 287 HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFH 346
HI+CG H+A VT QG +F +G+ + G+LG + + +P ++ L V CG H
Sbjct: 38 HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
T T GE+ G + LGH D + +R+ + + ++ G +A +T
Sbjct: 98 TLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155
Query: 407 STGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G+LF +GD + G LG G+ + P+E+ + V+CG H+A V +
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHW--VSCGYRHSALVTD------- 206
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKE--PRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
SG ++++G+ RLG + P V +L ++ +VACG T+ LT
Sbjct: 207 ----SGDVYSFGESADGRLGLSAHQLANHSYPQRVESL--HSVLQVACGGKHTLALTED- 259
Query: 525 HVFTMGSTVYGQLGNPN----ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYT 580
++ G +GQLG AD P V G V + CG H A++T +YT
Sbjct: 260 ELYCFGGGEFGQLGLGTLVFVADS--PVAVGHFRKGR-VTHVTCGEQHSALITDSGLLYT 316
Query: 581 WGKGANGRLGHGDVE--DRKTPALVEALKDRHVKYIACGSNY 620
+G G +G+LGHGD ++ TP + + + V +ACGS++
Sbjct: 317 FGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358
Score = 313 (115.2 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 97/322 (30%), Positives = 149/322 (46%)
Query: 259 DKNVNYLGTRADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
D N LG + + +P+ V+ +ACG H + T QGE+ G S G+LG
Sbjct: 60 DNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLG 119
Query: 317 HGVGKDIVQPHLLESLT-MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV 375
G D + L + ++ G+ + A+T G L+ WGD ++AG LG G D
Sbjct: 120 LGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFLWGD--NSAGQLGFGNDS 177
Query: 376 SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG---DGTFGVLGHGDRKNVSY 432
+PK ++ G + V+CG H+AL+T +G +++FG DG G+ H N SY
Sbjct: 178 HALLPKELN---MGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAH-QLANHSY 233
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE- 491
P+ VESL + + VACG HT A+ E +L+ +G G+ +LG G
Sbjct: 234 PQRVESLHSV--LQVACGGKHTLALTE------------DELYCFGGGEFGQLGLGTLVF 279
Query: 492 PRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN--PNADGKLPCL 549
P V V CG + +T SG ++T G +G+LG+ N +
Sbjct: 280 VADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPT 339
Query: 550 VEDKLAGESVEEIACGAYHVAV 571
V + SV +ACG+ H+ V
Sbjct: 340 VCQRFFEYSVMTVACGSSHMLV 361
Score = 291 (107.5 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 86/219 (39%), Positives = 113/219 (51%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +++WG DN AG + + G + LLP+ L N+ +H ++CG RH+ALVT
Sbjct: 158 GRLFLWG----DN--SAG---QLGF-GNDSHALLPKEL--NMGQSIHWVSCGYRHSALVT 205
Query: 300 RQGEVFTWGEESGGRLG---HGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
G+V+++GE + GRLG H + P +ESL SV V CG HT A+T EL
Sbjct: 206 DSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESLH--SVLQVACGGKHTLALT-EDEL 261
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
Y +G G G LG GT V G +V VTCG H+ALIT +G L+TFGD
Sbjct: 262 YCFGGGEF--GQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGD 319
Query: 417 GTFGVLGHGDRK--NVSYPREVESLSGLRTIAVACGVWH 453
G G LGHGD N P + + VACG H
Sbjct: 320 GRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358
Score = 288 (106.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 89/291 (30%), Positives = 138/291 (47%)
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCG 398
++CG+ H+ VT G L+ +GD +N G LG + + K + L+G + SV CG
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGD--NNRGQLG--LQIKGPVTKPVCVKVLKGERAQSVACG 94
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAV 457
HT + TS G++ G + G LG G ++S+ R + I + HT+A
Sbjct: 95 TDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQR-LRPFCDYAPIKLLSAGDHTSA- 152
Query: 458 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLT 517
A G+LF WGD +LG G+ L P + + + H V+CG+ +
Sbjct: 153 ---------ALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELN--MGQSIHWVSCGYRHS 201
Query: 518 VGLTTSGHVFTMGSTVYGQLG---NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
+T SG V++ G + G+LG + A+ P VE SV ++ACG H LT
Sbjct: 202 ALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESL---HSVLQVACGGKHTLALTE 258
Query: 575 RNEVYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+E+Y +G G G+LG G V +P V + V ++ CG +SA I
Sbjct: 259 -DELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALI 308
Score = 52 (23.4 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 994 LANSSCVSESSEGKESMPLQDSENGTRPRSPALSVSSHQVE 1034
+A + S+ S G+E + L D+E T+ S + ++S V+
Sbjct: 636 VAKADRYSKDSRGEEVITLSDTEQETKSSSIKIPLTSSSVQ 676
Score = 39 (18.8 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 1001 SESSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYE 1042
SE EG E + +D E + + V + E + E E
Sbjct: 1337 SERQEGDEQIEEEDEEGEKEGKMKSSEVKFREAETDDEENNE 1378
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 313 (115.2 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 96/345 (27%), Positives = 151/345 (43%)
Query: 256 AGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
+G D + +GT + +E+ V + G R++ + G +FTWG G L
Sbjct: 12 SGEDGQLG-IGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTL 70
Query: 316 GHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN-AGLLGHGT 373
GH P +++L + G +H AV G Y WG + G
Sbjct: 71 GHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKD 130
Query: 374 DVSHWIPKRISGPLE---GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
++ + + I P L V V G H+ ++T G ++T+G GD K +
Sbjct: 131 EMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPW----PPGDIKQI 186
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
S P V+ L +R IAV G +H A+ E G+L WG+ + +LG GD
Sbjct: 187 SVPVRVQGLENVRLIAV--GAFHNLALEE-----------DGRLLAWGNNEYGQLGTGDT 233
Query: 491 EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLV 550
+P P V L D +A G + LT G V+ G +G+LG + D K +V
Sbjct: 234 QPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDND-KSSKMV 292
Query: 551 EDK---LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
K LA E + +++CG H LT ++++G+G +GRLG+G
Sbjct: 293 PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 295 (108.9 bits), Expect = 7.8e-25, P = 7.8e-25
Identities = 88/326 (26%), Positives = 138/326 (42%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGT 363
+ WG G+LG G ++ ++E+L SV V G ++ A+ G ++TWG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG--W 64
Query: 364 HNAGLLGHGTDV-SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVL 422
+ G LGH + + IP R+ L +++ G WH + G+ + +G +G
Sbjct: 65 NQRGTLGHQPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 423 GHGDRKNVSYPREVESLSGLRTIAVA--CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
G K+ R V R I + C T V T S G ++TWG
Sbjct: 124 GEEPLKD-EMGRPVR-----RDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQP 177
Query: 481 DKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP 540
GD + P V L + V H+L L G + G+ YGQLG
Sbjct: 178 ----WPPGDIKQISVPVRVQGLENVRLIAVGAFHNLA--LEEDGRLLAWGNNEYGQLGTG 231
Query: 541 NADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE--DRK 598
+ + L ++ +IA G +H LT + EVY WG+G +GRLG GD + +
Sbjct: 232 DTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKM 291
Query: 599 TPALVEALKDRHVKYIACGSNYSAAI 624
P V L + + ++CG +S A+
Sbjct: 292 VPQKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 248 (92.4 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 84/326 (25%), Positives = 140/326 (42%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGR---------LGHGVGKDI 323
+P +++ + + A G H V QG + WG G+ +G V +DI
Sbjct: 81 IPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140
Query: 324 VQP-HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
V P LT+ V G H+ +T G ++TWG + +S +P R
Sbjct: 141 VIPKRCAPKLTVRQV---AAGGTHSVVLTREGHVWTWGQPWPPGDI----KQIS--VPVR 191
Query: 383 ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGL 442
+ G LE +++ +V G +H + G+L +G+ +G LG GD + S+P V+ L L
Sbjct: 192 VQG-LENVRLIAV--GAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDL 248
Query: 443 RTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
+ +A G WH+ A+ T G+ G+ + LG DK ++ P V L
Sbjct: 249 TLVDIAAGGWHSTAL-----TDKGEVYGWGR----GEHGRLGLGDNDKSSKMVPQKVNLL 299
Query: 503 IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN----------------PNADGKL 546
+ + +V+CG + +V LT G +F+ G +G+LG P +G
Sbjct: 300 AEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSF 359
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVL 572
E++ S + IACG H +
Sbjct: 360 NHTDEEEEGKWSAKSIACGGRHTLAI 385
Score = 215 (80.7 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 60/201 (29%), Positives = 94/201 (46%)
Query: 276 PLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT-M 334
P+ + +V IA G H + G + WG G+LG G + P ++ L +
Sbjct: 189 PVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDL 248
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
T VD + G +H+ A+T GE+Y WG G H LG S +P++++ E +
Sbjct: 249 TLVD-IAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEE-DIIQ 306
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV---------------ESL 439
V+CG H+ +T G++F+FG G G LG+G + P E+ E
Sbjct: 307 VSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEE 366
Query: 440 SGLRTI-AVACGVWHTAAVVE 459
G + ++ACG HT A+VE
Sbjct: 367 EGKWSAKSIACGGRHTLAIVE 387
Score = 142 (55.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 42/172 (24%), Positives = 72/172 (41%)
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFT 528
V++ + WG G+ +LG G E + V AL Y+ V G ++ + G +FT
Sbjct: 2 VTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFT 61
Query: 529 MGSTVYGQLGN-PNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 586
G G LG+ P + +P V+ LA + + A G +H + + Y WG
Sbjct: 62 WGWNQRGTLGHQPETKTENIPSRVK-ALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 587 GRLGHGDVEDRK-TPALVEALKDRH------VKYIACGSNYSAAICL--HKW 629
G+ G ++D P + + + V+ +A G +S + H W
Sbjct: 121 GQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVW 172
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 334 (122.6 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 94/296 (31%), Positives = 141/296 (47%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R LE + + H+ACG A +T +G + T+G S G LGHG DI QP ++E+L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLG 448
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE-GLQVA 393
+ V CG H A++ GEL+ WG G + G LG GT SH P+++ P+ G +
Sbjct: 449 YEMVQVACGASHVLALSTDGELFAWGRG--DGGRLGLGTRESHNCPQQV--PVAPGQEAQ 504
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLG--HG--DRKNVSYPREVESLSGLRTIAVAC 449
V CG + ++TS G++ G F LG H D + V Y + E+LS + A
Sbjct: 505 RVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALS-FTPLGSAP 563
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHK 509
V++ S+A +SG +T+G +LG + P V L
Sbjct: 564 LDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVM 623
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
VACG + TV + G V++ G G+LG + D LP V+ D+ V ++C
Sbjct: 624 VACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSC 679
Score = 323 (118.8 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 101/325 (31%), Positives = 149/325 (45%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAG---LLGHGTDVS 376
G + P L L T V V G VT +G L W AG LL ++
Sbjct: 324 GGGLSSPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELP 382
Query: 377 HWIPKRISGPLEG---LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
P+ +S LEG + + V CG TA +T G + TFG G+ G LGHG+ ++S P
Sbjct: 383 Q--PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQP 440
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
VE+L G + VACG H A+ + G+LF WG GD RLG G +E
Sbjct: 441 TIVEALLGYEMVQVACGASHVLALS-----------TDGELFAWGRGDGGRLGLGTRESH 489
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGK-LPCL- 549
P VP +V CG ++ LT+ G V GS + +LG + + D + +P
Sbjct: 490 NCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQ 549
Query: 550 VEDKLA----GESV---EEIAC---GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT 599
VE+ L+ G + E + C G H A +T+ + YT+G +G+LG +
Sbjct: 550 VEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRA 609
Query: 600 PALVEALKDRHVKYIACGSNYSAAI 624
P V+ L+ + +ACG ++ A+
Sbjct: 610 PCRVQGLEGIKMVMVACGDAFTVAV 634
Score = 251 (93.4 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 73/265 (27%), Positives = 116/265 (43%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G D+ P +E+ + ++ +ACG H ++ GE+F WG GGRLG G +
Sbjct: 432 GNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNC 491
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRI- 383
P + V CG + +T G + G N L H + +P +++
Sbjct: 492 PQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVE 551
Query: 384 ---------SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
S PL+ + V G H+A IT++G +TFG G LG R+ P
Sbjct: 552 EALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPC 611
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
V+ L G++ + VACG T AV + G++++WG G + RLG D++ L
Sbjct: 612 RVQGLEGIKMVMVACGDAFTVAVG-----------AEGEVYSWGKGTRGRLGRRDEDAGL 660
Query: 495 -KPTCVPALIDYNFHKVACGHSLTV 518
+P + Y V+C H T+
Sbjct: 661 PRPVQLDETHPYMVTSVSCCHGNTL 685
Score = 171 (65.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 50/166 (30%), Positives = 80/166 (48%)
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL----PCLVE 551
P +P +++ +VA G + G+T SG + + G G G + P V
Sbjct: 330 PLRLP-MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVS 388
Query: 552 DKLAGES---VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKD 608
L G+S ++ +ACG A LT R + T+G G+NG LGHG++ D P +VEAL
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLG 448
Query: 609 RHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNC 654
+ +ACG+++ A+ + + + R G TR+ HNC
Sbjct: 449 YEMVQVACGASHVLALSTDGELFAWGR--GDGGRLGLG-TRESHNC 491
Score = 170 (64.9 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 52/187 (27%), Positives = 90/187 (48%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG--H-GVGK 321
LGTR P+ + + + CG+ + ++T G V G +LG H + +
Sbjct: 483 LGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDE 542
Query: 322 DIVQ-PHLLESLTMTSV-------DFVTC---GEFHTCAVTMAGELYTWGDGTHNAGLLG 370
+ V + E+L+ T + + + C G H+ A+T +G+ YT+G H G LG
Sbjct: 543 EPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQH--GQLG 600
Query: 371 HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNV 430
+ P R+ G LEG+++ V CG T + + G+++++G GT G LG D ++
Sbjct: 601 TSSRRVSRAPCRVQG-LEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRD-EDA 658
Query: 431 SYPREVE 437
PR V+
Sbjct: 659 GLPRPVQ 665
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 332 (121.9 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 91/295 (30%), Positives = 141/295 (47%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R LE + + H+ACG A +T +G + T+G S G LGHG DI QP ++E+L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLG 448
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+ V CG H A++ GEL+ WG G + G LG GT SH P+++ + G +
Sbjct: 449 YEMVQVACGASHVLALSADGELFAWGRG--DGGRLGLGTRESHNCPQQVP-MVPGQEAQR 505
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHG----DRKNVSYPREVESLSGLRTIAVACG 450
V CG + ++TS G++ G F LG + + V + + E+LS + A
Sbjct: 506 VVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALS-FTPLGSAPL 564
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
T V++ S+A +SG +T+G +LG + P V L V
Sbjct: 565 DRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMV 624
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
ACG + TV + G V++ G G+LG + D LP V+ D+ +V ++C
Sbjct: 625 ACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 679
Score = 328 (120.5 bits), Expect = 5.9e-26, P = 5.9e-26
Identities = 110/351 (31%), Positives = 166/351 (47%)
Query: 284 DVHHIACGVRHAALVTRQGEVFTWGEE----SGGRLGHGVGKDIVQPHL----LESLTMT 335
+V +A G A VTR G + W GG L G ++ QP LE +
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGA-VELPQPQFVSRFLEGQSGV 397
Query: 336 SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG--TDVSHWIPKRISGPLEGLQVA 393
++ V CG+ T +T G + T+G G++ G LGHG TD+S P + L G ++
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSN--GCLGHGSLTDISQ--PTIVEALL-GYEMV 452
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWH 453
V CG H +++ G+LF +G G G LG G R++ + P++V + G V CG+
Sbjct: 453 QVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDC 512
Query: 454 TAAVVEVIVTQSSASVSSGKL-FTWGDGDKNRLGHGDKEPRLKPTCV-PALIDYN-FHKV 510
+ + + S KL ++ + H E L T + A +D V
Sbjct: 513 SMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCV 572
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACG-AYH 568
G + + +T SG +T GS +GQLG + + PC V+ L G + +ACG A+
Sbjct: 573 DLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQG-LEGIKMVMVACGDAFT 631
Query: 569 VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH---VKYIAC 616
VA+ + EVY+WGKGA GRLG D ED P V+ L + H V ++C
Sbjct: 632 VAI-GAEGEVYSWGKGARGRLGRRD-EDAGLPRPVQ-LDETHPYTVTSVSC 679
Score = 318 (117.0 bits), Expect = 7.2e-25, P = 7.2e-25
Identities = 99/310 (31%), Positives = 141/310 (45%)
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEG-- 389
T V V G VT +G L W GT LL ++ P+ +S LEG
Sbjct: 338 TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQ--PQFVSRFLEGQS 395
Query: 390 -LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVA 448
+ + V CG TA +T G + TFG G+ G LGHG ++S P VE+L G + VA
Sbjct: 396 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVA 455
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
CG H A+ SA G+LF WG GD RLG G +E P VP +
Sbjct: 456 CGASHVLAL--------SAD---GELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQ 504
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNA---DGKLPCL-VEDKLA----GESV- 559
+V CG ++ LT+ G V GS + +LG + +P VE+ L+ G +
Sbjct: 505 RVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPL 564
Query: 560 --EEIAC---GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYI 614
E + C G H A +T+ YT+G +G+LG + P V+ L+ + +
Sbjct: 565 DRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMV 624
Query: 615 ACGSNYSAAI 624
ACG ++ AI
Sbjct: 625 ACGDAFTVAI 634
Score = 249 (92.7 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 73/265 (27%), Positives = 119/265 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G+ D+ P +E+ + ++ +ACG H ++ GE+F WG GGRLG G +
Sbjct: 432 GSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNC 491
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GL--LGHGTD-VSHW-IP 380
P + + V CG + +T G + G N GL L + V H +
Sbjct: 492 PQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVE 551
Query: 381 KRIS------GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
+ +S PL+ + V G H+A +T++G +TFG G LG R+ P
Sbjct: 552 EALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPC 611
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
V+ L G++ + VACG T A+ + G++++WG G + RLG D++ L
Sbjct: 612 RVQGLEGIKMVMVACGDAFTVAIG-----------AEGEVYSWGKGARGRLGRRDEDAGL 660
Query: 495 -KPTCVPALIDYNFHKVACGHSLTV 518
+P + Y V+C H T+
Sbjct: 661 PRPVQLDETHPYTVTSVSCCHGNTL 685
Score = 174 (66.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 65/222 (29%), Positives = 94/222 (42%)
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF-------GDGTF--GVLGHGDRKN 429
IP R+ P+ +V V G A +T +G+L + G GT G + +
Sbjct: 329 IPLRL--PMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQF 386
Query: 430 VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD 489
VS R +E SG+ VACG TA + + G + T+G G LGHG
Sbjct: 387 VS--RFLEGQSGVTIKHVACGDLFTACLTD-----------RGIIMTFGSGSNGCLGHGS 433
Query: 490 KEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPC 548
+PT V AL+ Y +VACG S + L+ G +F G G+LG + P
Sbjct: 434 LTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQ 493
Query: 549 LVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
V + G+ + + CG +LTS V G +LG
Sbjct: 494 QVP-MVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLG 534
Score = 169 (64.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 48/153 (31%), Positives = 73/153 (47%)
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL----PCLVEDKLAGES---VEE 561
+VA G + G+T SG + + G G G + P V L G+S ++
Sbjct: 342 QVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKH 401
Query: 562 IACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
+ACG A LT R + T+G G+NG LGHG + D P +VEAL + +ACG+++
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHV 461
Query: 622 AAICLHKWVSSAEQLQCSACRQAFGFTRKRHNC 654
A+ + + + R G TR+ HNC
Sbjct: 462 LALSADGELFAWGR--GDGGRLGLG-TRESHNC 491
Score = 165 (63.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH---GVGK 321
LGTR P+ + + + CG+ + ++T G V G +LG + +
Sbjct: 483 LGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEE 542
Query: 322 DIVQPH--LLESLTMTSV-------DFVTC---GEFHTCAVTMAGELYTWGDGTHNAGLL 369
+ V PH + E+L+ T + + + C G H+ AVT +G YT+G H G L
Sbjct: 543 EPV-PHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQH--GQL 599
Query: 370 GHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN 429
G + P R+ G LEG+++ V CG T I + G+++++G G G LG D ++
Sbjct: 600 GTSSRRVSRAPCRVQG-LEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRD-ED 657
Query: 430 VSYPREVE 437
PR V+
Sbjct: 658 AGLPRPVQ 665
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 332 (121.9 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 116/356 (32%), Positives = 168/356 (47%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVG 320
G A + LP L + VV +A G A VTR G + W G G L V
Sbjct: 326 GLSAPLRLPM-LNTEVV----QVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVE 380
Query: 321 KDIVQ--PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG--TDVS 376
+ Q LE + ++ V CG+ T +T G + T+G G++ G LGHG D+S
Sbjct: 381 QQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN--GCLGHGGLNDIS 438
Query: 377 HWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
P + L G ++ V CG H +++ +LF +G G G LG G R++ S P++V
Sbjct: 439 Q--PTIVEALL-GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQV 495
Query: 437 ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS--GKLFT--WGDGDKNRLGHGDKEP 492
G V CG+ ++V+ + Q+ A S+ KL G++ L H E
Sbjct: 496 PMPPGQEAQRVICGI--DSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPAL-HQQVEE 552
Query: 493 RLKPTCV-PALIDYN-FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCL 549
L T + A +D V G + + +T SG +T GS +GQLG N + PC
Sbjct: 553 ALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQ 612
Query: 550 VEDKLAGESVEEIACG-AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
V+ L G + +ACG A+ VA+ + EVY+WGKGA GRLG D ED P V+
Sbjct: 613 VQG-LQGIKIAMVACGDAFTVAI-GAEGEVYSWGKGARGRLGRRD-EDAALPRPVQ 665
Score = 324 (119.1 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 89/294 (30%), Positives = 133/294 (45%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R LE + + H+ACG A +T +G + T+G S G LGHG DI QP ++E+L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLG 448
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+ V CG H A++ EL+ WG G + G LG GT SH P+++ P G +
Sbjct: 449 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHSCPQQVPMP-PGQEAQR 505
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP---REVESLSGLRTIAVACGV 451
V CG + ++T GQ G F LG P ++VE + A
Sbjct: 506 VICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLD 565
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
V++ S+A +SG +T+G +LG + P V L VA
Sbjct: 566 QEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVA 625
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
CG + TV + G V++ G G+LG + D LP V+ D+ +V ++C
Sbjct: 626 CGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAALPRPVQLDETQPYTVTSVSC 679
Score = 316 (116.3 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 110/353 (31%), Positives = 151/353 (42%)
Query: 291 GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
G A+ V+TWG GG + P L L T V V G V
Sbjct: 307 GPARPAIPPPLSSVYTWG---GG---------LSAPLRLPMLN-TEVVQVAAGRTQKAGV 353
Query: 351 TMAGELYTWGDGTHNAG--LLGHGTDVSHWIPKRISGPLEG---LQVASVTCGPWHTALI 405
T +G L W AG L G V P+ +S LEG + + V CG TA +
Sbjct: 354 TRSGRLILWEAPPLGAGGGALLPGA-VEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACL 412
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G + TFG G+ G LGHG ++S P VE+L G + VACG H A + T+
Sbjct: 413 TDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLA----LSTER 468
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
+LF WG GD RLG G +E P VP +V CG +V LT G
Sbjct: 469 -------ELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQ 521
Query: 526 VFTMGSTVYGQLGNPNAD-GKLPCL---VEDKL----AG------ESVEEIACGAYHVAV 571
GS + +LG + G+ P L VE+ L G E + + G H A
Sbjct: 522 ALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAA 581
Query: 572 LTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+T+ + YT+G +G+LG + P V+ L+ + +ACG ++ AI
Sbjct: 582 VTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAI 634
Score = 249 (92.7 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 71/261 (27%), Positives = 117/261 (44%)
Query: 270 DVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLL 329
D+ P +E+ + ++ +ACG H ++ + E+F WG GGRLG G + P +
Sbjct: 436 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQV 495
Query: 330 ESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GL----LGHGTDVSHWIPKRI- 383
V CG + +T+ G+ G N GL LG + + + +
Sbjct: 496 PMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALN 555
Query: 384 -----SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
S PL+ + SV G H+A +T++G +TFG G LG R+ P +V+
Sbjct: 556 FTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG 615
Query: 439 LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL-KPT 497
L G++ VACG T A+ + G++++WG G + RLG D++ L +P
Sbjct: 616 LQGIKIAMVACGDAFTVAIG-----------AEGEVYSWGKGARGRLGRRDEDAALPRPV 664
Query: 498 CVPALIDYNFHKVACGHSLTV 518
+ Y V+C H T+
Sbjct: 665 QLDETQPYTVTSVSCCHGNTL 685
Score = 170 (64.9 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 53/188 (28%), Positives = 91/188 (48%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG--H-GVGK 321
LGTR P+ + + + CG+ + ++T G+ G +LG H +G+
Sbjct: 483 LGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGE 542
Query: 322 D-IVQPHLLESLTMTSVDF----------VTCGEFHTCAVTMAGELYTWGDGTHNAGLLG 370
+ + + E+L T + V G H+ AVT +G+ YT+G H G LG
Sbjct: 543 EPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQH--GQLG 600
Query: 371 -HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN 429
+ VS P ++ G L+G+++A V CG T I + G+++++G G G LG D ++
Sbjct: 601 TNARRVSR-APCQVQG-LQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRD-ED 657
Query: 430 VSYPREVE 437
+ PR V+
Sbjct: 658 AALPRPVQ 665
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 327 (120.2 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 97/369 (26%), Positives = 172/369 (46%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
+C H+ L+T +G++++WG G+LGHG K + P L+E+L+ ++ CG HT
Sbjct: 155 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTL 213
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
A+T G ++ +G+ LG+ TD +P G + + CG + L+
Sbjct: 214 ALTDTGSVFAFGENKMGQLGLGNQTDA---VPSPAQIMYNGQPITKMACGAEFSMLMDCK 270
Query: 409 GQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVACGVWHTA-----AVVEVIV 462
G L++FG +G LGH D K ++ + +E L VA + T V V+V
Sbjct: 271 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 330
Query: 463 TQSSASV-------SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY---NFHKVAC 512
+ S ++F+WG G RLGH +++ + P V L D+ ++
Sbjct: 331 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGATQIYA 389
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYHVAV 571
G++ + ++ G +F G+T N + + + P V+D L G + +ACG + V
Sbjct: 390 GYTCSFAVSEVGGLFFWGAT------NTSRESTMYPKAVQD-LCGWRIRSLACGKSSIIV 442
Query: 572 LTSRNEVYTWGKGAN-GRLGHGDVEDRKTPAL--VEALKDRHVKYIACGSNYSAAICLHK 628
+ + +WG G LG+GD + + + A V+ L + +A G ++S I +
Sbjct: 443 AADESTI-SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDE 501
Query: 629 WVSSAEQLQ 637
+ E+LQ
Sbjct: 502 SEAEKEKLQ 510
Score = 220 (82.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 54/185 (29%), Positives = 86/185 (46%)
Query: 409 GQLFTFGDGTFGVLGHGD--RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
GQL FG + ++G + ++ +Y ++L G GV V S
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
+ GKL++WG +K +LGHGD + P + AL ACG + T+ LT +G V
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSV 221
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 586
F G GQLG N +P + G+ + ++ACGA ++ + +Y++G
Sbjct: 222 FAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEY 281
Query: 587 GRLGH 591
G+LGH
Sbjct: 282 GQLGH 286
Score = 191 (72.3 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 85/331 (25%), Positives = 137/331 (41%)
Query: 319 VGKDIVQPHLLESLTMTSVDFVTCGEF--HTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
+G+++ PH L+ V V G H+ +T G+L++WG + G LGHG D
Sbjct: 130 LGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG--RNEKGQLGHG-DTK 186
Query: 377 HWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN-VSYPRE 435
R+ L + CG HT +T TG +F FG+ G LG G++ + V P +
Sbjct: 187 RVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQ 246
Query: 436 VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD------ 489
+ +G +ACG A +++ G L+++G + +LGH
Sbjct: 247 I-MYNGQPITKMACG-----AEFSMLMD------CKGNLYSFGCPEYGQLGHNSDGKFIA 294
Query: 490 KEPRLKPTC--VPALIDYNFHK----------------VACGHSLTVGLTTSGHVFTMGS 531
+ R++ C VP + K VACG + T+ L + VF+ G
Sbjct: 295 RAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGF 354
Query: 532 TVYGQLGNPNA-DGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSR-NEVYTWGKGANGR 588
YG+LG+ D +P LV+ G +I G Y + S ++ WG R
Sbjct: 355 GGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAG-YTCSFAVSEVGGLFFWGATNTSR 413
Query: 589 LGHGDVEDRKTPALVEALKDRHVKYIACGSN 619
E P V+ L ++ +ACG +
Sbjct: 414 ------ESTMYPKAVQDLCGWRIRSLACGKS 438
Score = 189 (71.6 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 61/196 (31%), Positives = 93/196 (47%)
Query: 267 TRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQP 326
T+ +LP P NVV V +ACG H ++ Q VF+WG GRLGH KD + P
Sbjct: 317 TKDGQILPVP---NVV--VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 371
Query: 327 HLLESLTMTSVDFVTCGEFHTC--AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
L++ +TC AV+ G L+ WG T+ + S PK +
Sbjct: 372 RLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG-ATNTSR-------ESTMYPKAVQ 423
Query: 385 GPLEGLQVASVTCGPWHTALITSTGQLFTFGDG-TFGVLGHGDRKNVSYP--REVESLSG 441
L G ++ S+ CG + ++ + ++G TFG LG+GD K S +EV++L G
Sbjct: 424 D-LCGWRIRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDG 481
Query: 442 LRTIAVACGVWHTAAV 457
+ + VA G H+ +
Sbjct: 482 IFSEQVAMGYSHSLVI 497
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 331 (121.6 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 91/295 (30%), Positives = 140/295 (47%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R LE + + H+ACG A +T +G + T+G S G LGHG DI QP ++E+L
Sbjct: 392 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 451
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+ V CG H A++ EL+ WG G + G LG GT SH P+++S P G +
Sbjct: 452 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHSCPQQVSMP-PGQEAQR 508
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY---P-REVESLSGLRTIAVACG 450
V CG + ++T G+ G F LG DR ++ P ++VE + A
Sbjct: 509 VVCGIDSSMILTVPGRALACGSNRFNKLGL-DRLSLGEEPAPNQQVEEALSFTPLGSAPF 567
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
V++ S+A +SG +T+G +LG + P V L + V
Sbjct: 568 DREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMV 627
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
ACG + TV + G V++ G G+LG + D LP V+ D++ +V ++C
Sbjct: 628 ACGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDEIHPYTVTSVSC 682
Score = 302 (111.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 99/324 (30%), Positives = 141/324 (43%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAG--LLGHGTDVSH 377
G + P L L T V V G VT +G L W AG L G V
Sbjct: 327 GGGLSAPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGA-VEQ 384
Query: 378 WIPKRISGPLEG---LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
P+ +S LEG + + V CG TA +T G + TFG G+ G LGHG ++S P
Sbjct: 385 QQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPT 444
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
VE+L G + VACG H A + T+ +LF WG GD RLG G +E
Sbjct: 445 IVEALLGYEMVQVACGASHVLA----LSTER-------ELFAWGRGDGGRLGLGTRESHS 493
Query: 495 KPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPC---LV 550
P V +V CG ++ LT G GS + +LG G+ P V
Sbjct: 494 CPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQV 553
Query: 551 EDKLA----G------ESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP 600
E+ L+ G E + + G H A +T+ + YT+G +G+LG + P
Sbjct: 554 EEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAP 613
Query: 601 ALVEALKDRHVKYIACGSNYSAAI 624
V+ L++ + +ACG ++ A+
Sbjct: 614 CQVQGLQNIKIAMVACGDAFTVAV 637
Score = 244 (91.0 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 71/265 (26%), Positives = 117/265 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G+ D+ P +E+ + ++ +ACG H ++ + E+F WG GGRLG G +
Sbjct: 435 GSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSC 494
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GL----LGHGTDVSHWIP 380
P + V CG + +T+ G G N GL LG + +
Sbjct: 495 PQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVE 554
Query: 381 KRIS------GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
+ +S P + + SV G H+A +T++G +TFG G LG R+ P
Sbjct: 555 EALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPC 614
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
+V+ L ++ VACG T AV + G++++WG G + RLG D++ L
Sbjct: 615 QVQGLQNIKIAMVACGDAFTVAVG-----------AEGEVYSWGKGARGRLGRRDEDAGL 663
Query: 495 -KPTCVPALIDYNFHKVACGHSLTV 518
+P + + Y V+C H T+
Sbjct: 664 PRPVQLDEIHPYTVTSVSCCHGNTL 688
Score = 174 (66.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 50/166 (30%), Positives = 82/166 (49%)
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN---PNA-DGKLPCLVE 551
P +P +++ +VA G + G+T SG + + G G P A + + P V
Sbjct: 333 PLRLP-MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVS 391
Query: 552 DKLAGES---VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKD 608
L G+S ++ +ACG A LT R + T+G G+NG LGHG + D P +VEAL
Sbjct: 392 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 451
Query: 609 RHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNC 654
+ +ACG+++ A+ + + + + R G TR+ H+C
Sbjct: 452 YEMVQVACGASHVLALSTERELFAWGR--GDGGRLGLG-TRESHSC 494
Score = 162 (62.1 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 56/217 (25%), Positives = 98/217 (45%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH---GVGK 321
LGTR P+ + + + CG+ + ++T G G +LG +G+
Sbjct: 486 LGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGE 545
Query: 322 DIV-QPHLLESLTMT---SVDF-------VTCGEFHTCAVTMAGELYTWGDGTHNAGLLG 370
+ + E+L+ T S F V G H+ AVT +G+ YT+G H G LG
Sbjct: 546 EPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQH--GQLG 603
Query: 371 -HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN 429
+ VS P ++ G L+ +++A V CG T + + G+++++G G G LG D ++
Sbjct: 604 TNARRVSR-APCQVQG-LQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRD-ED 660
Query: 430 VSYPREVE--SLSGLRTIAVACGVWHTAAVVEVIVTQ 464
PR V+ + +V+C +T V + +
Sbjct: 661 AGLPRPVQLDEIHPYTVTSVSCCHGNTLLAVRPVTDE 697
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 321 (118.1 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 98/365 (26%), Positives = 167/365 (45%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMA 353
H+ ++T +G++++WG G+LGHG K + P L+E L + CG HT A+T
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 354 GELYTWGDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPWHTALITSTGQLF 412
G +YT+G+ + G LG G + P I G + V CG + ++ G L+
Sbjct: 194 GTVYTFGE--NKLGQLGQGNQTDAVLSPATIQ--YNGQPIVKVACGAEFSMIVDCKGNLY 249
Query: 413 TFGDGTFGVLGHG-DRKNVSYPREVESLSGL--RTIAVACGVWHTAAVVEV--IVTQSSA 467
+FG +G LGH D K ++ + +E L R +A+ V+ V +V + A
Sbjct: 250 SFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVA 309
Query: 468 SV--------SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY---NFHKVACGHSL 516
S ++F+WG G RLGH +++ + P V L D+ ++ CG+
Sbjct: 310 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGATQIYCGYQC 368
Query: 517 TVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSR 575
+ L+ G +F G T N + + + P V+D L G + +ACG + V
Sbjct: 369 SFALSEMGGLFFWGVT------NTSRESTMYPKAVQD-LCGWKIRSLACGKSSIIVAADD 421
Query: 576 NEVYTWGKGAN-GRLGHGDVEDRK--TPALVEALKDRHVKYIACGSNYSAAICLHKWVSS 632
+ + +WG G LG+GD + + T V+ L + + + G ++S I
Sbjct: 422 STI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQDTEQE 480
Query: 633 AEQLQ 637
E+L+
Sbjct: 481 KEKLK 485
Score = 226 (84.6 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 90/330 (27%), Positives = 143/330 (43%)
Query: 319 VGKDIVQPHLLESLTMTSVDFVTCGEF--HTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
+G+++ PH L+ V V G H+ +T G+L++WG ++ G LGHG
Sbjct: 105 LGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWG--RNDKGQLGHGDTKR 162
Query: 377 HWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN-VSYPRE 435
PK I G E + VA+ CG HT +T G ++TFG+ G LG G++ + V P
Sbjct: 163 LEAPKLIEGLGEEVIVAAA-CGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPAT 221
Query: 436 VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD------ 489
++ +G + VACG A +IV G L+++G + +LGH
Sbjct: 222 IQ-YNGQPIVKVACG-----AEFSMIVD------CKGNLYSFGCPEYGQLGHNSDGKFIA 269
Query: 490 KEPRLKPTC--VPALIDYNFHK----------------VACGHSLTVGLTTSGHVFTMGS 531
+ R++ C +P + K VACG + T+ L + VF+ G
Sbjct: 270 RAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGF 329
Query: 532 TVYGQLGNPNA-DGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
YG+LG+ D +P LV+ G +I CG L+ ++ WG R
Sbjct: 330 GGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR- 388
Query: 590 GHGDVEDRKTPALVEALKDRHVKYIACGSN 619
E P V+ L ++ +ACG +
Sbjct: 389 -----ESTMYPKAVQDLCGWKIRSLACGKS 413
Score = 214 (80.4 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 58/193 (30%), Positives = 96/193 (49%)
Query: 409 GQLFTFGDGTFGVLGHGD--RKNVSYPREVESLSG------LRTIAVACGVWHTAAVVEV 460
GQL FG + ++G + ++ ++ ++L G L + V+C V A +
Sbjct: 77 GQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSL 136
Query: 461 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGL 520
I+T + GKL++WG DK +LGHGD + P + L + ACG + T+ L
Sbjct: 137 IIT------TEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLAL 190
Query: 521 TTSGHVFTMGSTVYGQLGNPN-ADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
T +G V+T G GQLG N D L P ++ G+ + ++ACGA ++ + +
Sbjct: 191 TENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN--GQPIVKVACGAEFSMIVDCKGNL 248
Query: 579 YTWGKGANGRLGH 591
Y++G G+LGH
Sbjct: 249 YSFGCPEYGQLGH 261
Score = 178 (67.7 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 57/196 (29%), Positives = 92/196 (46%)
Query: 267 TRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQP 326
T+ +LP P NVV +ACG H ++ Q VF+WG GRLGH KD + P
Sbjct: 292 TKDGQVLPVP---NVV--ARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 346
Query: 327 HLLESLTMTS--VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
L++ + CG + A++ G L+ WG + + + S PK +
Sbjct: 347 RLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWG--------VTNTSRESTMYPKAVQ 398
Query: 385 GPLEGLQVASVTCGPWHTALITSTGQLFTFGDG-TFGVLGHGDRKNVSYP--REVESLSG 441
L G ++ S+ CG + ++ + ++G TFG LG+GD K S +EV++L G
Sbjct: 399 D-LCGWKIRSLACGK-SSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDG 456
Query: 442 LRTIAVACGVWHTAAV 457
+ + V G H+ +
Sbjct: 457 VYSEQVVMGYSHSLVI 472
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 564 CGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
C A H ++T+ ++++WG+ G+LGHGD + + P L+E L + + ACG N++ A
Sbjct: 131 CAA-HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLA 189
Query: 624 I 624
+
Sbjct: 190 L 190
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 319 (117.4 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 91/294 (30%), Positives = 134/294 (45%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEF-HTCAVTMA 353
A T EVF +G LG G + + P LE+L + ++ G H T
Sbjct: 34 AIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTED 93
Query: 354 GELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLF 412
GE+Y WG HN LG+G P ++ L +V V CG H+ ++ G L+
Sbjct: 94 GEVYAWG---HNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLY 150
Query: 413 TFGDGTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS 471
+G G +G G N PR V + L + +ACG T S A V++
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQ-----------TSSMAVVNN 199
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G+++ WG +LG G+ +L P V AL ++ACG++ T+ LT G ++ G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGA 259
Query: 532 TVYGQLGNPNADGKLPCLVEDKLAGESVEEIA-CGAYHV-AVLTSRNEVYTWGK 583
YGQLG N +L L + + E V EIA C + H A T +VY WG+
Sbjct: 260 NTYGQLGTGNKSNQLSPL-QIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ 312
Score = 301 (111.0 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 80/274 (29%), Positives = 127/274 (46%)
Query: 263 NYLGT--RADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTWGEESGGRLGHGV 319
N LGT ++P+ LE+ + ++ G H L T GEV+ WG +LG+G
Sbjct: 52 NCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGA 111
Query: 320 GKDIVQP-HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHW 378
V P + +L + V V CG H+ A++ G+LY WG +N G +G G+ +
Sbjct: 112 TNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWG--YNNCGQVGSGSTANQP 169
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
P+R+S L+ V + CG + + + G+++ +G G LG G+ N P V +
Sbjct: 170 TPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAA 229
Query: 439 LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTC 498
L G+ + +ACG HT A+ + G L+ WG +LG G+K +L P
Sbjct: 230 LHGVCILQIACGYAHTLALTD-----------EGLLYAWGANTYGQLGTGNKSNQLSPLQ 278
Query: 499 VPALIDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
+ + AC HS + T SG V+ G
Sbjct: 279 IMMEKERVVEIAAC-HSAHTSAAKTQSGQVYMWG 311
Score = 268 (99.4 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 85/305 (27%), Positives = 139/305 (45%)
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
++ P + S+ V + E T E++ +G N LG G S +PK+
Sbjct: 12 LLSPQEIASIRKACVFGTSANE--AIYTTHNDEVFVFGLNCSNC--LGTGDSQSTIVPKK 67
Query: 383 ISGPLEGLQVASVTCGPW-HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV-ESLS 440
+ L G +++S++ G H L T G+++ +G + LG+G P +V +L
Sbjct: 68 LEA-LCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLL 126
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
+ I VACG H+ A+ G L+ WG + ++G G + P V
Sbjct: 127 LKKVIEVACGSHHSMALS-----------FDGDLYAWGYNNCGQVGSGSTANQPTPRRVS 175
Query: 501 -ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGES 558
L D +ACG + ++ + +G V+ G GQLG N +L PC V L G
Sbjct: 176 NCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVA-ALHGVC 234
Query: 559 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGS 618
+ +IACG H LT +Y WG G+LG G+ ++ +P + K+R V+ AC S
Sbjct: 235 ILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAACHS 294
Query: 619 NYSAA 623
+++A
Sbjct: 295 AHTSA 299
Score = 243 (90.6 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 66/245 (26%), Positives = 115/245 (46%)
Query: 236 CDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHA 295
C G+VY WG + ++ V + ++LL + +E +ACG H+
Sbjct: 90 CTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIE---------VACGSHHS 140
Query: 296 ALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLES-LTMTSVDFVTCGEFHTCAVTMAG 354
++ G+++ WG + G++G G + P + + L V + CG+ + AV G
Sbjct: 141 MALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNG 200
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
E+Y WG + G LG G + + P R++ L G+ + + CG HT +T G L+ +
Sbjct: 201 EVYGWG--YNGNGQLGLGNNGNQLTPCRVAA-LHGVCILQIACGYAHTLALTDEGLLYAW 257
Query: 415 GDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGK 473
G T+G LG G++ N P ++ + R + +A C HT+A A SG+
Sbjct: 258 GANTYGQLGTGNKSNQLSPLQI-MMEKERVVEIAACHSAHTSA----------AKTQSGQ 306
Query: 474 LFTWG 478
++ WG
Sbjct: 307 VYMWG 311
Score = 224 (83.9 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 70/257 (27%), Positives = 122/257 (47%)
Query: 374 DVSHWIPKRISGPLE--GLQVASVTCGPWHTALITS-TGQLFTFGDGTFGVLGHGDRKNV 430
DV W + P E ++ A V + A+ T+ ++F FG LG GD ++
Sbjct: 3 DVGKWPIFTLLSPQEIASIRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQST 62
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
P+++E+L G + +++ G + ++ T+ G+++ WG ++LG+G
Sbjct: 63 IVPKKLEALCGKKISSLSYG----SGPHVLLCTED------GEVYAWGHNGYSQLGNGAT 112
Query: 491 EPRLKPT--CVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLP 547
+ P C L+ +VACG ++ L+ G ++ G GQ+G+ + A+ P
Sbjct: 113 NQGVTPVQVCTNLLLK-KVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTP 171
Query: 548 CLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALK 607
V + L + V IACG + + EVY WG NG+LG G+ ++ TP V AL
Sbjct: 172 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALH 231
Query: 608 DRHVKYIACGSNYSAAI 624
+ IACG ++ A+
Sbjct: 232 GVCILQIACGYAHTLAL 248
Score = 190 (71.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 64/190 (33%), Positives = 88/190 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLD--VHHIACGVRHAAL 297
GD+Y WG C V G+ G+ A+ PR + SN + D V IACG +
Sbjct: 147 GDLYAWGYNNCGQV---GS-------GSTANQPTPRRV-SNCLQDKMVVGIACGQTSSMA 195
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
V GEV+ WG G+LG G + + P + +L + + CG HT A+T G LY
Sbjct: 196 VVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLY 255
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGD 416
WG T+ G LG G + P +I E + V C HT A T +GQ++ +G
Sbjct: 256 AWGANTY--GQLGTGNKSNQLSPLQIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWGQ 312
Query: 417 --GTFGVLGH 424
G VL H
Sbjct: 313 CRGQSVVLPH 322
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG + L P + + + + IACG H +T +G ++ WG + G+LG G + +
Sbjct: 215 LGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL 274
Query: 325 QPHLLESLTMTSVDFVTCGEFHTCAV-TMAGELYTWGDGTHNAGLLGHGT 373
P + V+ C HT A T +G++Y WG + +L H T
Sbjct: 275 SPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPHLT 324
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 318 (117.0 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 90/294 (30%), Positives = 138/294 (46%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEF-HTCAVTMA 353
A +T EV+ G LG G + + P L+ L+ + ++ G H VT
Sbjct: 34 AIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTED 93
Query: 354 GELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLF 412
GELY WG HN LG+GT P +S L+G +V V+CG H+ +T G++F
Sbjct: 94 GELYAWG---HNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVF 150
Query: 413 TFGDGTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS 471
+G G +G G N PR+V + L + +ACG T S A +
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQ-----------TSSMAVTDN 199
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G+++ WG +LG G+ +L P + AL + ++A G++ ++ LT G ++ G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGA 259
Query: 532 TVYGQLGNPNADGKLPCLVEDKLAGESVEEIA-CGAYHV-AVLTSRNEVYTWGK 583
YGQLG N +L V+ E + EIA C + H A T +VY WG+
Sbjct: 260 NTYGQLGTGNKSNQLSP-VQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ 312
Score = 277 (102.6 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 80/286 (27%), Positives = 131/286 (45%)
Query: 251 DNVVKAGADKNVNYLGT--RADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTW 307
D V G + + N LGT + P+ L+ + ++ G H LVT GE++ W
Sbjct: 41 DEVYVLGLNCS-NCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAW 99
Query: 308 GEESGGRLGHGVGKDIVQPHLLES-LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
G +LG+G V P L+ + L V V+CG H+ A+T GE++ WG +N
Sbjct: 100 GHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWG--YNNC 157
Query: 367 GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
G +G G+ + P+++S L+ + ++ CG + +T G+++ +G G LG G+
Sbjct: 158 GQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217
Query: 427 RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
N P + +L G + +A G H+ A+ + G L+ WG +LG
Sbjct: 218 NGNQLTPCRLIALQGFCVLQIASGYAHSLALTD-----------EGLLYAWGANTYGQLG 266
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
G+K +L P V + AC HS + T SG V+ G
Sbjct: 267 TGNKSNQLSPVQVMTEKERIVEIAAC-HSTHTSAAKTQSGQVYMWG 311
Score = 274 (101.5 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 84/281 (29%), Positives = 130/281 (46%)
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW-HTALITST 408
+T E+Y G N LG G S PK++ L G ++ S++ G H L+T
Sbjct: 37 ITHDDEVYVLGLNCSNC--LGTGDSQSTIAPKKLDC-LSGKKLISLSYGSGPHVLLVTED 93
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
G+L+ +G + LG+G P V + L G R V+CG H+ A+
Sbjct: 94 GELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTH-------- 145
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKE----PRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
G++F WG + ++G G PR C+ + N +ACG + ++ +T +
Sbjct: 146 ---EGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVN---IACGQTSSMAVTDN 199
Query: 524 GHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G V+ G GQLG N +L PC + L G V +IA G H LT +Y WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPCRLI-ALQGFCVLQIASGYAHSLALTDEGLLYAWG 258
Query: 583 KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
G+LG G+ ++ +P V K+R V+ AC S +++A
Sbjct: 259 ANTYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSA 299
Score = 238 (88.8 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 74/256 (28%), Positives = 124/256 (48%)
Query: 374 DVSHW-IPKRISGP-LEGLQVASVTCGPWHTAL-ITSTGQLFTFGDGTFGVLGHGDRKNV 430
DVS W + +S L ++ A + + A+ IT +++ G LG GD ++
Sbjct: 3 DVSKWPLFTLLSAQELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQST 62
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
P++++ LSG + I+++ G + ++VT+ G+L+ WG ++LG+G
Sbjct: 63 IAPKKLDCLSGKKLISLSYG----SGPHVLLVTED------GELYAWGHNGYSQLGNGTT 112
Query: 491 EPRLKPTCVPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLPC 548
+ P V L +V+CG ++ LT G VF G GQ+G+ + A+ P
Sbjct: 113 NQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 549 LVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKD 608
V + L + + IACG +T EVY WG NG+LG G+ ++ TP + AL+
Sbjct: 173 KVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQG 232
Query: 609 RHVKYIACGSNYSAAI 624
V IA G +S A+
Sbjct: 233 FCVLQIASGYAHSLAL 248
Score = 235 (87.8 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 67/240 (27%), Positives = 110/240 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G++Y WG + ++ V+ +L+ L+ V +V +CG H+ +T
Sbjct: 94 GELYAWGHNGYSQLGNGTTNQGVS------PILVSTNLQGKRVTEV---SCGSHHSLALT 144
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDF-VTCGEFHTCAVTMAGELYT 358
+GEVF WG + G++G G + P + + V + CG+ + AVT GE+Y
Sbjct: 145 HEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYG 204
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG G + + P R+ L+G V + G H+ +T G L+ +G T
Sbjct: 205 WG--YNGNGQLGLGNNGNQLTPCRLIA-LQGFCVLQIASGYAHSLALTDEGLLYAWGANT 261
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
+G LG G++ N P +V + AC HT+A A SG+++ WG
Sbjct: 262 YGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSA----------AKTQSGQVYMWG 311
Score = 177 (67.4 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 59/188 (31%), Positives = 86/188 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+V+ WG C V G+ N R + L++ V+++ IACG + VT
Sbjct: 147 GEVFAWGYNNCGQV---GSGSTANQPTPRK---VSNCLQNKVIVN---IACGQTSSMAVT 197
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
GEV+ WG G+LG G + + P L +L V + G H+ A+T G LY W
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAW 257
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGD-- 416
G T+ G LG G + P ++ E + V C HT A T +GQ++ +G
Sbjct: 258 GANTY--GQLGTGNKSNQLSPVQVMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWGQCR 314
Query: 417 GTFGVLGH 424
G VL H
Sbjct: 315 GQAIVLPH 322
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 323 (118.8 bits), Expect = 4.5e-25, P = 4.5e-25
Identities = 99/357 (27%), Positives = 171/357 (47%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
++CG H A+VT +++ +G + G+LG G + +P +++L V F CG HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
T G++Y G +N G LG G IS ++ ++ G +A +T
Sbjct: 100 LVSTEGGKVYAAGG--NNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157
Query: 408 TGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
G+LF +GD + G +G + NV P++V G ++CG +H+A V
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFVT--------- 206
Query: 468 SVSSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
+ G+L+T+G+ + +LG ++ R+ P VP I +VACG TV LT
Sbjct: 207 --TEGQLYTFGEPECGKLGLPNQLLVNHRM-PQPVPG-IPGKVVQVACGGGHTVVLTEKA 262
Query: 525 HVFTMGSTVYGQLGNPNA--DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
V+T G +GQLG + +P +E + + + IACG H A++T +YT+G
Sbjct: 263 -VYTFGLGQFGQLGLGTFLFETSVPKAIEH-IKDQKISFIACGENHTALITDMGLMYTFG 320
Query: 583 KGANGRLGHG--DVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQ 637
G +G+LG G + ++ P L V+ ++CG ++ + + E+++
Sbjct: 321 DGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFATPR-LGGTEEME 376
Score = 301 (111.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 89/291 (30%), Positives = 145/291 (49%)
Query: 339 FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCG 398
F++CG+ HT VT +LY +G ++N G LG G+ + P + L+ +V CG
Sbjct: 39 FLSCGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAV 457
HT + T G+++ G G LG GD + S + + R I ++ G +AA+
Sbjct: 96 RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAAL 155
Query: 458 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLT 517
E G+LF WGD + ++G + P V + ++CG+ +
Sbjct: 156 TE-----------DGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHS 202
Query: 518 VGLTTSGHVFTMGSTVYGQLGNPN---ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
+TT G ++T G G+LG PN + ++P V + G+ V+ +ACG H VLT
Sbjct: 203 AFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQ-VACGGGHTVVLTE 260
Query: 575 RNEVYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ VYT+G G G+LG G + + P +E +KD+ + +IACG N++A I
Sbjct: 261 K-AVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310
Score = 287 (106.1 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 89/318 (27%), Positives = 161/318 (50%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG+++ V P +++ V ACG H + T G+V+ G + G+LG G ++
Sbjct: 69 LGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERS 128
Query: 325 QPHLLESLT-MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
HL+ T + ++ G + A+T GEL+ WGD + L + T+V +P+++
Sbjct: 129 TFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC--VPQQV 186
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY--PREVESLSG 441
+ G ++ ++CG +H+A +T+ GQL+TFG+ G LG ++ V++ P+ V + G
Sbjct: 187 T---VGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG 243
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK--EPRLKPTCV 499
+ + VACG HT V++T+ + ++T+G G +LG G E + P +
Sbjct: 244 -KVVQVACGGGHT-----VVLTEKA-------VYTFGLGQFGQLGLGTFLFETSV-PKAI 289
Query: 500 PALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN--PNADGK-LPCLVEDKLAG 556
+ D +ACG + T +T G ++T G +G+LG N+ + +P L + L
Sbjct: 290 EHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRF 349
Query: 557 ESVEEIACGAYHVAVLTS 574
V+ ++CG H V +
Sbjct: 350 -IVQLVSCGGCHTLVFAT 366
Score = 210 (79.0 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 68/221 (30%), Positives = 110/221 (49%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G++++WG+ ++ + G + NV + V + +P+ I+CG H+A VT
Sbjct: 159 GELFMWGD---NSEGQIGLE-NVTNVCVPQQVTVGKPIS--------WISCGYYHSAFVT 206
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT---SVDFVTCGEFHTCAVTMAGEL 356
+G+++T+GE G+LG + ++ H + V V CG HT +T +
Sbjct: 207 TEGQLYTFGEPECGKLG--LPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA-V 263
Query: 357 YTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
YT+G G G LG GT + +PK I ++ +++ + CG HTALIT G ++TFG
Sbjct: 264 YTFGLGQF--GQLGLGTFLFETSVPKAIEH-IKDQKISFIACGENHTALITDMGLMYTFG 320
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIA--VACGVWHT 454
DG G LG G + + + LR I V+CG HT
Sbjct: 321 DGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT 361
Score = 126 (49.4 bits), Expect = 0.00072, P = 0.00072
Identities = 33/99 (33%), Positives = 47/99 (47%)
Query: 523 SGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
SG VFT G T + + N K + ++CG H AV+T N++Y +G
Sbjct: 11 SGAVFTFGKTQFAE----NIPSKF------WFRNDVPTFLSCGDEHTAVVTGNNKLYMFG 60
Query: 583 KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
G+LG G P V+ALK VK+ ACG N++
Sbjct: 61 SNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 315 (115.9 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 94/369 (25%), Positives = 170/369 (46%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
+C H+ L+T +G++++WG G+LGHG K + P L+E L+ + CG HT
Sbjct: 157 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 215
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
A+T G ++ +G+ LG+ TD +P G + + CG + ++
Sbjct: 216 ALTETGSVFAFGENKMGQLGLGNQTDA---VPSPAQIMYNGQPITKMACGAEFSMIMDCK 272
Query: 409 GQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVACGVWHTA-----AVVEVIV 462
G L++FG +G LGH D K ++ + +E L VA + T V V+V
Sbjct: 273 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 332
Query: 463 TQSSASV-------SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY---NFHKVAC 512
+ S ++F+WG G RLGH +++ + P V L D+ ++
Sbjct: 333 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGASQIYA 391
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYHVAV 571
G++ + ++ G +F G+T N + + + P V+D L G + +ACG + V
Sbjct: 392 GYTCSFAVSEVGGLFFWGAT------NTSRESTMYPKAVQD-LCGWRIRSLACGKSSIIV 444
Query: 572 LTSRNEVYTWGKGAN-GRLGHGDVEDRKTPAL--VEALKDRHVKYIACGSNYSAAICLHK 628
+ + +WG G LG+GD + + + A V+ L + +A G ++S I +
Sbjct: 445 AADESTI-SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDE 503
Query: 629 WVSSAEQLQ 637
+ E+++
Sbjct: 504 SETEKEKIK 512
Score = 220 (82.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 409 GQLFTFGDGTFGVLGHGD--RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
GQL FG + ++G + ++ +Y ++L G GV V S
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 163
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
+ GKL++WG +K +LGHGD + P + L ACG + T+ LT +G V
Sbjct: 164 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 223
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 586
F G GQLG N +P + G+ + ++ACGA ++ + +Y++G
Sbjct: 224 FAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEY 283
Query: 587 GRLGH 591
G+LGH
Sbjct: 284 GQLGH 288
Score = 203 (76.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 88/331 (26%), Positives = 138/331 (41%)
Query: 319 VGKDIVQPHLLESLTMTSVDFVTCGEF--HTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
+G+++ PH L V V G H+ +T G+L++WG + G LGHG
Sbjct: 132 LGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG--RNEKGQLGHGDTKR 189
Query: 377 HWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN-VSYPRE 435
P+ I G L + S CG HT +T TG +F FG+ G LG G++ + V P +
Sbjct: 190 VEAPRLIEG-LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQ 248
Query: 436 VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD------ 489
+ +G +ACG A +I+ G L+++G + +LGH
Sbjct: 249 I-MYNGQPITKMACG-----AEFSMIMD------CKGNLYSFGCPEYGQLGHNSDGKFIA 296
Query: 490 KEPRLKPTC--VPALIDYNFHK----------------VACGHSLTVGLTTSGHVFTMGS 531
+ R++ C VP + K VACG + T+ L + VF+ G
Sbjct: 297 RAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGF 356
Query: 532 TVYGQLGNPNA-DGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSR-NEVYTWGKGANGR 588
YG+LG+ D +P LV+ G +I G Y + S ++ WG R
Sbjct: 357 GGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAG-YTCSFAVSEVGGLFFWGATNTSR 415
Query: 589 LGHGDVEDRKTPALVEALKDRHVKYIACGSN 619
E P V+ L ++ +ACG +
Sbjct: 416 ------ESTMYPKAVQDLCGWRIRSLACGKS 440
Score = 187 (70.9 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 61/196 (31%), Positives = 93/196 (47%)
Query: 267 TRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQP 326
T+ +LP P NVV V +ACG H ++ Q VF+WG GRLGH KD + P
Sbjct: 319 TKDGQILPVP---NVV--VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 373
Query: 327 HLLESLTMTSVDFVTCGEFHTC--AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
L++ +TC AV+ G L+ WG T+ + S PK +
Sbjct: 374 RLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG-ATNTSR-------ESTMYPKAVQ 425
Query: 385 GPLEGLQVASVTCGPWHTALITSTGQLFTFGDG-TFGVLGHGDRKNVSYP--REVESLSG 441
L G ++ S+ CG + ++ + ++G TFG LG+GD K S +EV++L G
Sbjct: 426 D-LCGWRIRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDG 483
Query: 442 LRTIAVACGVWHTAAV 457
+ + VA G H+ +
Sbjct: 484 IFSEQVAMGYSHSLVI 499
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 319 (117.4 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 99/325 (30%), Positives = 142/325 (43%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGD---GTHNAGLLGHGTDVS 376
G I P L L T V V+ G VT +G L W GT L T+
Sbjct: 324 GSGITTPLRLPMLN-TEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQL 382
Query: 377 HWIPKRISGPLEG---LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
P+ +S LEG + + V+CG TA +T G + TFG G+ G LGHG+ +VS P
Sbjct: 383 Q--PQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQP 440
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
+ VE+L G + VACG H AV + ++F WG GD RLG G E
Sbjct: 441 KIVEALLGYEMVQVACGASHVLAVS-----------NEREVFAWGRGDNGRLGLGTLECH 489
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDK 553
P V ++ +V CG ++ LT + + GS +LG ED+
Sbjct: 490 NSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQ 549
Query: 554 LAGESV-----------EEIAC---GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT 599
+ +V E + C G H A +T+ + YT+G +G+LG + +
Sbjct: 550 VEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRV 609
Query: 600 PALVEALKDRHVKYIACGSNYSAAI 624
P LV L+ V +ACG ++ AI
Sbjct: 610 PHLVVGLRAMKVTVVACGDAFTVAI 634
Score = 293 (108.2 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 109/354 (30%), Positives = 164/354 (46%)
Query: 284 DVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH----GVGKDIVQPHL----LESLTMT 335
+V ++ G A VT+ G + W G G G + + QP LE +
Sbjct: 339 EVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQL-QPQFVSRFLEGQSGV 397
Query: 336 SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG--TDVSHWIPKRISGPLEGLQVA 393
++ V+CG+ T +T G + T+G G++ G LGHG TDVS PK + L G ++
Sbjct: 398 TIKHVSCGDLFTACLTDRGIIMTFGSGSN--GCLGHGNFTDVSQ--PKIVEALL-GYEMV 452
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWH 453
V CG H +++ ++F +G G G LG G + + P++V V CG+
Sbjct: 453 QVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGI-- 510
Query: 454 TAAVVEVIVTQSSASVSS--GKLFTWGDGDKNRLGHGDK-EPRLKPTCVPALIDYNFHKV 510
+++V + Q A S+ KL D+ E TC + N V
Sbjct: 511 DSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSA-PLNQEPV 569
Query: 511 AC---GHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACG- 565
C G + + +T SG +T GS +GQLG N + ++P LV L V +ACG
Sbjct: 570 VCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG-LRAMKVTVVACGD 628
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH---VKYIAC 616
A+ VA+ + EV TWGKGA GRLG D E+ P V+ L++ H V +AC
Sbjct: 629 AFTVAI-GADGEVCTWGKGARGRLGRKD-EETGMPRPVQ-LEETHPYVVTSVAC 679
Score = 285 (105.4 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 87/295 (29%), Positives = 135/295 (45%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R LE + + H++CG A +T +G + T+G S G LGHG D+ QP ++E+L
Sbjct: 389 RFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLG 448
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+ V CG H AV+ E++ WG G + G LG GT H P++++ P E +
Sbjct: 449 YEMVQVACGASHVLAVSNEREVFAWGRGDN--GRLGLGTLECHNSPQQVAVPPEH-EAQR 505
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR---EVESLSGLRTIAVACGV 451
V CG + ++T Q+ G LG + P +VE + + T A + +
Sbjct: 506 VICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEAT-VFTCAQSAPL 564
Query: 452 WHTAAVVEVIVTQSSASVS-SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
V I T SA+V+ SG+ +T+G +LG P V L V
Sbjct: 565 NQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVV 624
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
ACG + TV + G V T G G+LG + + +P V+ ++ V +AC
Sbjct: 625 ACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVAC 679
Score = 226 (84.6 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 72/265 (27%), Positives = 110/265 (41%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G DV P+ +E+ + ++ +ACG H V+ + EVF WG GRLG G +
Sbjct: 432 GNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNS 491
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPK-RI- 383
P + V CG + +T+ ++ G N L + P+ ++
Sbjct: 492 PQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVE 551
Query: 384 ---------SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
S PL V G H+A +T++GQ +TFG G LG +N P
Sbjct: 552 EATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPH 611
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
V L ++ VACG T A+ + G++ TWG G + RLG D+E +
Sbjct: 612 LVVGLRAMKVTVVACGDAFTVAIG-----------ADGEVCTWGKGARGRLGRKDEETGM 660
Query: 495 -KPTCVPALIDYNFHKVACGHSLTV 518
+P + Y VAC H T+
Sbjct: 661 PRPVQLEETHPYVVTSVACCHGNTL 685
Score = 215 (80.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 60/194 (30%), Positives = 91/194 (46%)
Query: 457 VVEVIV--TQSSASVSSGKLFTWGDGDKNRLGHGDKEP----RLKPTCVPALID----YN 506
VV+V TQ + SG+L W G G P +L+P V ++
Sbjct: 340 VVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAG-GPSLPGATEQLQPQFVSRFLEGQSGVT 398
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLPCLVEDKLAGESVEEIACG 565
V+CG T LT G + T GS G LG+ N D P +VE L E V+ +ACG
Sbjct: 399 IKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ-VACG 457
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
A HV +++ EV+ WG+G NGRLG G +E +P V + + + CG + S +
Sbjct: 458 ASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLT 517
Query: 626 LHKWVSSAEQLQCS 639
++ + + +C+
Sbjct: 518 VNNQILACGSNRCN 531
Score = 172 (65.6 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL----PCLVE 551
P +P +++ +V+ G + G+T SG + + G G P+ G P V
Sbjct: 330 PLRLP-MLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVS 388
Query: 552 DKLAGES---VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKD 608
L G+S ++ ++CG A LT R + T+G G+NG LGHG+ D P +VEAL
Sbjct: 389 RFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLG 448
Query: 609 RHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSR 668
+ +ACG+++ A+ S E R+ F + R + G + CH+ +
Sbjct: 449 YEMVQVACGASHVLAV-------SNE-------REVFAWGRGDNGRLGLGTLECHNSPQQ 494
Query: 669 KAL 671
A+
Sbjct: 495 VAV 497
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 315 (115.9 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 95/314 (30%), Positives = 140/314 (44%)
Query: 276 PLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT 335
P E+ + A VT EVF +G LG G + + P LE+L
Sbjct: 15 PQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK 74
Query: 336 SVDFVTCGEF-HTCAVTMAGELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVA 393
+ ++ G H T G +Y WG HN LG+GT P ++ L QV
Sbjct: 75 KIKSLSYGSGPHVLLTTEDGVVYAWG---HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVI 131
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVW 452
V CG H+ + + G+LF +G G +G G N PR+V + L R + +ACG
Sbjct: 132 EVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ- 190
Query: 453 HTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC 512
T S A + SG+++ WG +LG G+ +L P V AL +++ C
Sbjct: 191 ----------TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVC 240
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIA-CGAYHV- 569
G++ T+ LT G ++ G+ YGQLG + + L P + + E V EIA C + H
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTS 298
Query: 570 AVLTSRNEVYTWGK 583
A T VY WG+
Sbjct: 299 AAKTQGGHVYMWGQ 312
Score = 287 (106.1 bits), Expect = 7.9e-22, P = 7.9e-22
Identities = 80/286 (27%), Positives = 128/286 (44%)
Query: 251 DNVVKAGADKNVNYLGT--RADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTW 307
D V G + + N LGT L+P+ LE+ + ++ G H L T G V+ W
Sbjct: 41 DEVFVFGLNYS-NCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAW 99
Query: 308 GEESGGRLGHGVGKDIVQP-HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
G +LG+G + P + +L + V V CG H+ A+ GEL+ WG +N
Sbjct: 100 GHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWG--YNNC 157
Query: 367 GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
G +G G+ + P++++ L +V ++ CG + + +G+++ +G G LG G+
Sbjct: 158 GQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 427 RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
N P V +L G+ + CG HT A+ + G L+ WG +LG
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD-----------EGLLYAWGANTYGQLG 266
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
G K L PT + + AC HS + T GHV+ G
Sbjct: 267 TGSKNNLLSPTQIMVEKERVIEIAAC-HSTHTSAAKTQGGHVYMWG 311
Score = 263 (97.6 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 79/277 (28%), Positives = 126/277 (45%)
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW-HTALITST 408
VT E++ +G N LG G + S +PK++ L G ++ S++ G H L T
Sbjct: 37 VTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLTTED 93
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREV-ESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
G ++ +G + LG+G P +V +L + I VACG H+ A+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALA--------- 144
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP-ALIDYNFHKVACGHSLTVGLTTSGHV 526
+ G+LF WG + ++G G + P V L +ACG + ++ + SG V
Sbjct: 145 --ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 586
+ G GQLG N +L + L G V +I CG H LT +Y WG
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
G+LG G + +P + K+R ++ AC S +++A
Sbjct: 263 GQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Score = 237 (88.5 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 77/258 (29%), Positives = 122/258 (47%)
Query: 374 DVSHWIPKRISGPLEG--LQVASVTCGPWHTAL-ITSTGQLFTFGDGTFGVLGHGDRKNV 430
DV W + P E ++ A V + A+ +T ++F FG LG GD ++
Sbjct: 3 DVGKWPIFTLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQST 62
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
P+++E+L G + +++ G + V++T G ++ WG ++LG+G
Sbjct: 63 LVPKKLEALCGKKIKSLSYG-----SGPHVLLT-----TEDGVVYAWGHNGYSQLGNGTT 112
Query: 491 EPRLKPT--CVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLP 547
+ P C LI +VACG ++ L G +F G GQ+G+ + A+ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVI-EVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTP 171
Query: 548 CLVEDKLAGESVEEIACG-AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
V + L + V IACG +AVL S EVY WG NG+LG G+ ++ TP V AL
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDS-GEVYGWGYNGNGQLGLGNNGNQLTPVRVAAL 230
Query: 607 KDRHVKYIACGSNYSAAI 624
V I CG ++ A+
Sbjct: 231 HGMCVNQIVCGYAHTLAL 248
Score = 168 (64.2 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNV-VLDVHHIACGVRHAALV 298
G+++ WG C V G+ G+ A+ PR + + + V +IACG + V
Sbjct: 147 GELFAWGYNNCGQV---GS-------GSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAV 196
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
GEV+ WG G+LG G + + P + +L V+ + CG HT A+T G LY
Sbjct: 197 LDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYA 256
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGD- 416
WG T+ G LG G+ + P +I E + + C HT A T G ++ +G
Sbjct: 257 WGANTY--GQLGTGSKNNLLSPTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWGQC 313
Query: 417 -GTFGVLGH 424
G +L H
Sbjct: 314 RGQSVILPH 322
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 30/110 (27%), Positives = 50/110 (45%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG + L P + + + V+ I CG H +T +G ++ WG + G+LG G +++
Sbjct: 215 LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL 274
Query: 325 QPHLLESLTMTSVDFVTCGEFHTCAV-TMAGELYTWGDGTHNAGLLGHGT 373
P + ++ C HT A T G +Y WG + +L H T
Sbjct: 275 SPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLT 324
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 315 (115.9 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 94/305 (30%), Positives = 141/305 (46%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEF-HTCAVTMA 353
A VT EVF +G LG G + + P LE+L + ++ G H T
Sbjct: 63 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 122
Query: 354 GELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLF 412
G +Y WG HN LG+GT P ++ L QV V CG H+ + + G++F
Sbjct: 123 GVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 179
Query: 413 TFGDGTFGVLGHGDRKNVSYPREVESLSGL-RTIAVACGVWHTAAVVEVIVTQSSASVSS 471
+G G +G G N PR+V + + R +++ACG T S A + +
Sbjct: 180 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ-----------TSSMAVLDN 228
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G+++ WG +LG G+ +L P V AL +++ CG++ T+ LT G ++ G+
Sbjct: 229 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 288
Query: 532 TVYGQLGNPNADGKL-PCLVEDKLAGESVEEIA-CGAYHV-AVLTSRNEVYTWG--KGAN 586
YGQLG N + L P + + E V EIA C + H A T VY WG +G +
Sbjct: 289 NTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQS 346
Query: 587 GRLGH 591
L H
Sbjct: 347 VTLPH 351
Score = 270 (100.1 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 78/286 (27%), Positives = 126/286 (44%)
Query: 251 DNVVKAGADKNVNYLGT--RADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTW 307
D V G + + N LGT L+P+ LE+ + ++ G H L T G V+ W
Sbjct: 70 DEVFVFGLNYS-NCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAW 128
Query: 308 GEESGGRLGHGVGKDIVQP-HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
G +LG+G + P + +L + V V CG H+ A+ GE++ WG +N
Sbjct: 129 GHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG--YNNC 186
Query: 367 GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
G +G G+ + P++++ L +V S+ CG + + G+++ +G G LG G+
Sbjct: 187 GQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 246
Query: 427 RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
N P V +L + + CG HT A+ + G L+ WG +LG
Sbjct: 247 NGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD-----------EGLLYAWGANTYGQLG 295
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
G+K L P + + AC HS + T GHV+ G
Sbjct: 296 TGNKNNLLSPAHIMVEKERVVEIAAC-HSAHTSAAKTQGGHVYMWG 340
Score = 252 (93.8 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 80/304 (26%), Positives = 136/304 (44%)
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
++ P + S+ V + E VT E++ +G N LG G + S +PK+
Sbjct: 41 LLSPQEIASIRKACVFGTSANE--ALYVTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKK 96
Query: 383 ISGPLEGLQVASVTCGPW-HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV-ESLS 440
+ L G ++ S++ G H L T G ++ +G + LG+G P +V +L
Sbjct: 97 LEA-LCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL 155
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
+ + VACG H+ A+ + G++F WG + ++G G + P V
Sbjct: 156 IKQVVEVACGSHHSMALA-----------ADGEVFAWGYNNCGQVGSGSTANQPTPRKVT 204
Query: 501 ALIDYN-FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESV 559
+ +ACG + ++ + +G V+ G GQLG N +L + L V
Sbjct: 205 NCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCV 264
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSN 619
+I CG H LT +Y WG G+LG G+ + +PA + K+R V+ AC S
Sbjct: 265 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSA 324
Query: 620 YSAA 623
+++A
Sbjct: 325 HTSA 328
Score = 242 (90.2 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 71/244 (29%), Positives = 113/244 (46%)
Query: 251 DNVVKAGADKNVNYLG--TRADVLLPRPLESNVVL-DVHHIACGVRHAALVTRQGEVFTW 307
D VV A + LG T + P + +N+++ V +ACG H+ + GEVF W
Sbjct: 122 DGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAW 181
Query: 308 GEESGGRLGHGVGKDIVQPHLLES-LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
G + G++G G + P + + L + V + CG+ + AV GE+Y WG +
Sbjct: 182 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWG--YNGN 239
Query: 367 GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
G LG G + + P R++ L + V + CG HT +T G L+ +G T+G LG G+
Sbjct: 240 GQLGLGNNGNQLTPVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 298
Query: 427 RKNVSYPREVESLSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGD--GDKN 483
+ N+ P + + R + +A C HT+A A G ++ WG G
Sbjct: 299 KNNLLSPAHI-MVEKERVVEIAACHSAHTSA----------AKTQGGHVYMWGQCRGQSV 347
Query: 484 RLGH 487
L H
Sbjct: 348 TLPH 351
Score = 236 (88.1 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 75/257 (29%), Positives = 118/257 (45%)
Query: 374 DVSHWIPKRISGPLE--GLQVASVTCGPWHTAL-ITSTGQLFTFGDGTFGVLGHGDRKNV 430
DV W + P E ++ A V + AL +T ++F FG LG GD ++
Sbjct: 32 DVGKWPIFTLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQST 91
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
P+++E+L G + +++ G + V++ S G ++ WG ++LG+G
Sbjct: 92 LVPKKLEALCGKKIKSLSYG-----SGPHVLL-----STEDGVVYAWGHNGYSQLGNGTT 141
Query: 491 EPRLKP--TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLP 547
+ P C LI +VACG ++ L G VF G GQ+G+ + A+ P
Sbjct: 142 NQGIAPIQVCTNLLIK-QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTP 200
Query: 548 CLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALK 607
V + L + V IACG + EVY WG NG+LG G+ ++ TP V AL
Sbjct: 201 RKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 260
Query: 608 DRHVKYIACGSNYSAAI 624
V I CG ++ A+
Sbjct: 261 SVCVNQIVCGYAHTLAL 277
Score = 171 (65.3 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 56/178 (31%), Positives = 81/178 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNV-VLDVHHIACGVRHAALV 298
G+V+ WG C V G+ G+ A+ PR + + + + V IACG + V
Sbjct: 176 GEVFAWGYNNCGQV---GS-------GSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAV 225
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
GEV+ WG G+LG G + + P + +L V+ + CG HT A+T G LY
Sbjct: 226 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 285
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFG 415
WG T+ G LG G + P I E + V C HT A T G ++ +G
Sbjct: 286 WGANTY--GQLGTGNKNNLLSPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 132 (51.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG + L P + + + V+ I CG H +T +G ++ WG + G+LG G +++
Sbjct: 244 LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL 303
Query: 325 QP-HLLESLTMTSVDFVTCGEFHTCAV-TMAGELYTWGDGTHNAGLLGHGTDVS 376
P H++ V+ C HT A T G +Y WG + L H T S
Sbjct: 304 SPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFS 356
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 320 (117.7 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 98/352 (27%), Positives = 167/352 (47%)
Query: 287 HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFH 346
H++CG H+A+VT +++ +G + G+LG G I +P +++L V CG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
T T G +Y G +N G LG G IS ++ ++ G +A +T
Sbjct: 99 TLVSTEGGNVYATGG--NNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 407 STGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G+LF +GD + G +G + NV P++V G ++CG +H+A V
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFVT-------- 206
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDK--EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
+ G+L+ +G+ + +LG ++ P V + + +VACG TV LT +
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA 262
Query: 525 HVFTMGSTVYGQLGNPNA--DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
V+T G +GQLG + P ++E+ + +++ I+CG H A++T +YT+G
Sbjct: 263 -VYTFGLGQFGQLGLGTFLFETSEPKVIEN-IRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 583 KGANGRLGHG--DVEDRKTPALVEALKDRHVKYIACGSNYSAAICL-HKWVS 631
G +G+LG G + + P L VK +ACG + H+ V+
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372
Score = 247 (92.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 83/317 (26%), Positives = 153/317 (48%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG+++ + P +++ V ACG H + T G V+ G + G+LG G ++
Sbjct: 69 LGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERN 128
Query: 325 QPHLLESLTMT-SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
H++ T + ++ G + A+T G L+ WGD + G +G + +P+++
Sbjct: 129 TFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSE--GQIGLKNVSNVCVPQQV 186
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK--NVSYPREVESLSG 441
+ G V+ ++CG +H+A +T+ G+L+ FG+ G LG ++ N P+ V +
Sbjct: 187 T---IGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE 243
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVP 500
+ I VACG HT V++T+++ ++T+G G +LG G +P +
Sbjct: 244 -KVIQVACGGEHT-----VVLTENA-------VYTFGLGQFGQLGLGTFLFETSEPKVIE 290
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN--PNADGK-LPCLVEDKLAGE 557
+ D ++CG + T +T G ++T G +G+LG N +P L + L
Sbjct: 291 NIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRF- 349
Query: 558 SVEEIACGAYHVAVLTS 574
V+ +ACG H+ V +
Sbjct: 350 IVKLVACGGCHMVVFAA 366
Score = 211 (79.3 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 68/219 (31%), Positives = 105/219 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +++WG+ ++ + G KNV+ + V + +P V I+CG H+A VT
Sbjct: 159 GRLFMWGD---NSEGQIGL-KNVSNVCVPQQVTIGKP--------VSWISCGYYHSAFVT 206
Query: 300 RQGEVFTWGEESGGRLG---HGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
GE++ +GE G+LG +G P L+ + + V CG HT +T +
Sbjct: 207 TDGELYVFGEPENGKLGLPNQLLGNHRT-PQLVSEIPEKVIQ-VACGGEHTVVLT-ENAV 263
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
YT+G G G LG GT + ++ + ++ ++CG HTALIT G ++TFGD
Sbjct: 264 YTFGLGQF--GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGD 321
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIA--VACGVWH 453
G G LG G ++ + LR I VACG H
Sbjct: 322 GRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 319 (117.4 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 79/263 (30%), Positives = 137/263 (52%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLT 333
RPL+ V IACG +H+ ++ G++F WGE + G+LG + ++Q P L+SL
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169
Query: 334 MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 393
V ++ G H+ ++++G ++ WG +++AG LG G ++P + L G +
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWG--SNSAGQLGLGDTTDRFVPTIVKS-LSGKKTV 226
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWH 453
S++CG HTA ++ G +FTFG G FG LGH K+ +PR V L G + V CG H
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 286
Query: 454 TAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI------DYNF 507
T +V + + +++++G G + +LG+G++ + P +P L+ ++
Sbjct: 287 TLVLVAL----------TNRIYSFGCGMQGQLGNGEQVKQSVP--LPVLLPTDCNCEFTM 334
Query: 508 HKVACG--HSLTVGLTTSGHVFT 528
K+ G HS + G+ T
Sbjct: 335 EKIIAGEKHSFALFFKNPGNEST 357
Score = 298 (110.0 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 85/273 (31%), Positives = 131/273 (47%)
Query: 362 GTHNAGLLGHGTDVSHWIPKRISGPLEGL---QVASVTCGPWHTALITSTGQLFTFGDGT 418
G A LL G V + PL+GL +V + CG H+ +++ GQLF +G+
Sbjct: 87 GEDGAVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENA 146
Query: 419 FGVLG-HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
G LG ++ + P+ ++SL G+ ++ G H+ + S+S G +F W
Sbjct: 147 HGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVL----------SLS-GVVFGW 195
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
G +LG GD R PT V +L ++CG T L+ G VFT GS +GQL
Sbjct: 196 GSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQL 255
Query: 538 G-NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTS-RNEVYTWGKGANGRLGHGDVE 595
G N D P LV + L G V ++ CG +H VL + N +Y++G G G+LG+G+
Sbjct: 256 GHNSLKDEHHPRLVAE-LWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQV 314
Query: 596 DRKTPALVEALKDRHVKY----IACGSNYSAAI 624
+ P V D + ++ I G +S A+
Sbjct: 315 KQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347
Score = 240 (89.5 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 62/198 (31%), Positives = 100/198 (50%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +++WGE A + +A + P+ L+S + V I+ G H+ +++
Sbjct: 137 GQLFVWGE---------NAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLS 187
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G VF WG S G+LG G D P +++SL+ ++CG HT ++ G ++T+
Sbjct: 188 LSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTF 247
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGDGT 418
G G G LGH + P R+ L G +V+ VTCG HT L+ T ++++FG G
Sbjct: 248 GSG--GFGQLGHNSLKDEHHP-RLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGM 304
Query: 419 FGVLGHGDRKNVSYPREV 436
G LG+G++ S P V
Sbjct: 305 QGQLGNGEQVKQSVPLPV 322
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 312 (114.9 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 94/305 (30%), Positives = 139/305 (45%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEF-HTCAVTMA 353
A VT EVF +G LG G + P LE+L + ++ G H T
Sbjct: 34 ALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 354 GELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLF 412
G +Y WG HN LG+GT P ++ L QV V CG H+ + + G++F
Sbjct: 94 GVVYAWG---HNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 413 TFGDGTFGVLGHGDRKNVSYPREVESLSGL-RTIAVACGVWHTAAVVEVIVTQSSASVSS 471
+G G +G G N PR+V + + R + +ACG T S A + +
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ-----------TSSMAVLDN 199
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G+++ WG +LG G+ +L P V AL +++ CG++ T+ LT G ++ G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 532 TVYGQLGNPNADGKL-PCLVEDKLAGESVEEIA-CGAYHV-AVLTSRNEVYTWG--KGAN 586
YGQLG N + L P + + E V EIA C + H A T VY WG +G +
Sbjct: 260 NTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQS 317
Query: 587 GRLGH 591
L H
Sbjct: 318 VTLPH 322
Score = 260 (96.6 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 71/269 (26%), Positives = 117/269 (43%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
G L+P+ LE+ + ++ G H L T G V+ WG +LG+G +
Sbjct: 57 GDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGL 116
Query: 325 QP-HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
P + +L + V V CG H+ A+ GE++ WG +N G +G G+ + P+++
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG--YNNCGQVGSGSTANQPTPRKV 174
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
+ L +V + CG + + G+++ +G G LG G+ N P V +L +
Sbjct: 175 TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC 234
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
+ CG HT A+ + G L+ WG +LG G+K L P +
Sbjct: 235 VNQIVCGYAHTLALTD-----------EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK 283
Query: 504 DYNFHKVACGHSL--TVGLTTSGHVFTMG 530
+ AC HS + T GHV+ G
Sbjct: 284 ERVIEIAAC-HSAHTSAAKTQGGHVYMWG 311
Score = 258 (95.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 79/304 (25%), Positives = 139/304 (45%)
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
++ PH + S+ V + E VT + E++ +G + + LG G + S +PK+
Sbjct: 12 LLSPHEIASIRKACVFGTSANE--ALYVTDSDEVFVFG--LNYSSCLGTGDNHSTLVPKK 67
Query: 383 ISGPLEGLQVASVTCGPW-HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV-ESLS 440
+ L G ++ S++ G H L T G ++ +G + LG+G P +V +L
Sbjct: 68 LEA-LCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLL 126
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
+ + VACG H+ A+ + G++F WG + ++G G + P V
Sbjct: 127 IKQVVEVACGSHHSMALA-----------ADGEVFAWGYNNCGQVGSGSTANQPTPRKVT 175
Query: 501 ALIDYN-FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESV 559
+ +ACG + ++ + +G V+ G GQLG N +L + L V
Sbjct: 176 NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCV 235
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSN 619
+I CG H LT +Y WG G+LG G+ + +PA + K+R ++ AC S
Sbjct: 236 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSA 295
Query: 620 YSAA 623
+++A
Sbjct: 296 HTSA 299
Score = 244 (91.0 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 73/244 (29%), Positives = 113/244 (46%)
Query: 251 DNVVKAGADKNVNYLG--TRADVLLPRPLESNVVL-DVHHIACGVRHAALVTRQGEVFTW 307
D VV A + LG T L P + +N+++ V +ACG H+ + GEVF W
Sbjct: 93 DGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAW 152
Query: 308 GEESGGRLGHGVGKDIVQPHLLES-LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
G + G++G G + P + + L + V + CG+ + AV GE+Y WG +
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG--YNGN 210
Query: 367 GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
G LG G + + P R++ L + V + CG HT +T G L+ +G T+G LG G+
Sbjct: 211 GQLGLGNNGNQLTPVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269
Query: 427 RKNVSYPREVESLSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGD--GDKN 483
+ N+ P + + R I +A C HT+A A G ++ WG G
Sbjct: 270 KNNLLSPAHI-MVEKERVIEIAACHSAHTSA----------AKTQGGHVYMWGQCRGQSV 318
Query: 484 RLGH 487
L H
Sbjct: 319 TLPH 322
Score = 234 (87.4 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 76/257 (29%), Positives = 118/257 (45%)
Query: 374 DVSHWIPKRISGPLE--GLQVASVTCGPWHTAL-ITSTGQLFTFGDGTFGVLGHGDRKNV 430
DV W + P E ++ A V + AL +T + ++F FG LG GD +
Sbjct: 3 DVGKWPIFTLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHST 62
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
P+++E+L G + +++ G + V++ S G ++ WG ++LG+G
Sbjct: 63 LVPKKLEALCGKKIKSLSYG-----SGPHVLL-----STEDGVVYAWGHNGYSQLGNGTT 112
Query: 491 EPRLKP--TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLP 547
L P C LI +VACG ++ L G VF G GQ+G+ + A+ P
Sbjct: 113 NQGLAPIQVCTNLLIK-QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTP 171
Query: 548 CLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALK 607
V + L + V IACG + EVY WG NG+LG G+ ++ TP V AL
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 608 DRHVKYIACGSNYSAAI 624
V I CG ++ A+
Sbjct: 232 SVCVNQIVCGYAHTLAL 248
Score = 169 (64.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 55/178 (30%), Positives = 81/178 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNV-VLDVHHIACGVRHAALV 298
G+V+ WG C V G+ G+ A+ PR + + + + V IACG + V
Sbjct: 147 GEVFAWGYNNCGQV---GS-------GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
GEV+ WG G+LG G + + P + +L V+ + CG HT A+T G LY
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFG 415
WG T+ G LG G + P I E + + C HT A T G ++ +G
Sbjct: 257 WGANTY--GQLGTGNKNNLLSPAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 133 (51.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG + L P + + + V+ I CG H +T +G ++ WG + G+LG G +++
Sbjct: 215 LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL 274
Query: 325 QP-HLLESLTMTSVDFVTCGEFHTCAV-TMAGELYTWGDGTHNAGLLGHGTDVS 376
P H++ ++ C HT A T G +Y WG + L H T +S
Sbjct: 275 SPAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHLS 327
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 312 (114.9 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 91/295 (30%), Positives = 135/295 (45%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEF-HTCAVTMA 353
A VT EVF +G LG G + + P LE L + ++ G H T
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTED 93
Query: 354 GELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLF 412
G +Y WG HN LG+GT P ++ L QV V CG H+ + + G++F
Sbjct: 94 GVVYAWG---HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 413 TFGDGTFGVLGHGDRKNVSYPREVESLSGL-RTIAVACGVWHTAAVVEVIVTQSSASVSS 471
+G G +G G N PR+V + + R + +ACG T S A + +
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ-----------TSSMAVLDN 199
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G+++ WG +LG G+ +L P V AL +++ CG++ T+ LT G ++ G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 532 TVYGQLGNPNADGKL-PCLVEDKLAGESVEEIA-CGAYHV-AVLTSRNEVYTWGK 583
YGQLG N + L P + + E V EIA C + H A T VY WG+
Sbjct: 260 NTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 265 (98.3 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 77/286 (26%), Positives = 124/286 (43%)
Query: 251 DNVVKAGADKNVNYLGT--RADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTW 307
D V G + + N LGT L+P+ LE + ++ G H L T G V+ W
Sbjct: 41 DEVFVFGLNYS-NCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAW 99
Query: 308 GEESGGRLGHGVGKDIVQP-HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
G +LG+G + P + +L + V V CG H+ A+ GE++ WG +N
Sbjct: 100 GHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG--YNNC 157
Query: 367 GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
G +G G+ + P++++ L +V + CG + + G+++ +G G LG G+
Sbjct: 158 GQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 427 RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
N P V +L + + CG HT A+ + G L+ WG +LG
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD-----------EGLLYAWGANTYGQLG 266
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
G+K L P + + AC HS + T GHV+ G
Sbjct: 267 TGNKNNLLSPAHIMVEKERVVEIAAC-HSAHTSAAKTQGGHVYMWG 311
Score = 256 (95.2 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 81/304 (26%), Positives = 137/304 (45%)
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
++ P + S+ V + E VT E++ +G N LG G + S +PK+
Sbjct: 12 LLSPQEIASIRKACVFGTSASE--ALYVTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKK 67
Query: 383 ISGPLEGLQVASVTCGPW-HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV-ESLS 440
+ G L G ++ S++ G H L T G ++ +G + LG+G P +V +L
Sbjct: 68 LEG-LCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL 126
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
+ + VACG H+ A+ + G++F WG + ++G G + P V
Sbjct: 127 IKQVVEVACGSHHSMALA-----------ADGEVFAWGYNNCGQVGSGSTANQPTPRKVT 175
Query: 501 ALIDYN-FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESV 559
+ +ACG + ++ + +G V+ G GQLG N +L + L V
Sbjct: 176 NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCV 235
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSN 619
+I CG H LT +Y WG G+LG G+ + +PA + K+R V+ AC S
Sbjct: 236 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSA 295
Query: 620 YSAA 623
+++A
Sbjct: 296 HTSA 299
Score = 231 (86.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 75/257 (29%), Positives = 116/257 (45%)
Query: 374 DVSHWIPKRISGPLE--GLQVASVTCGPWHTAL-ITSTGQLFTFGDGTFGVLGHGDRKNV 430
DV W + P E ++ A V AL +T ++F FG LG GD ++
Sbjct: 3 DVGKWPIFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQST 62
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
P+++E L G + +++ G + V++ S G ++ WG ++LG+G
Sbjct: 63 LVPKKLEGLCGKKIKSLSYG-----SGPHVLL-----STEDGVVYAWGHNGYSQLGNGTT 112
Query: 491 EPRLKPT--CVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLP 547
+ P C LI +VACG ++ L G VF G GQ+G+ + A+ P
Sbjct: 113 NQGIAPVQVCTNLLIK-QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTP 171
Query: 548 CLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALK 607
V + L + V IACG + EVY WG NG+LG G+ ++ TP V AL
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 608 DRHVKYIACGSNYSAAI 624
V I CG ++ A+
Sbjct: 232 SVCVNQIVCGYAHTLAL 248
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 59/189 (31%), Positives = 85/189 (44%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNV-VLDVHHIACGVRHAALV 298
G+V+ WG C V G+ G+ A+ PR + + + + V IACG + V
Sbjct: 147 GEVFAWGYNNCGQV---GS-------GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
GEV+ WG G+LG G + + P + +L V+ + CG HT A+T G LY
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGD- 416
WG T+ G LG G + P I E + V C HT A T G ++ +G
Sbjct: 257 WGANTY--GQLGTGNKNNLLSPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQC 313
Query: 417 -GTFGVLGH 424
G +L H
Sbjct: 314 RGQSVILPH 322
Score = 135 (52.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG + L P + + + V+ I CG H +T +G ++ WG + G+LG G +++
Sbjct: 215 LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL 274
Query: 325 QP-HLLESLTMTSVDFVTCGEFHTCAV-TMAGELYTWGDGTHNAGLLGHGTDVS 376
P H++ V+ C HT A T G +Y WG + +L H T S
Sbjct: 275 SPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFS 327
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 312 (114.9 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 91/295 (30%), Positives = 136/295 (46%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEF-HTCAVTMA 353
A VT EVF +G LG G + + P LE+L + ++ G H T
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 354 GELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLF 412
G +Y WG HN LG+GT P ++ L QV V CG H+ + + G++F
Sbjct: 94 GVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 413 TFGDGTFGVLGHGDRKNVSYPREVESLSGL-RTIAVACGVWHTAAVVEVIVTQSSASVSS 471
+G G +G G N PR+V + + R + +ACG T S A + +
Sbjct: 151 AWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ-----------TSSMAVLDN 199
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G+++ WG +LG G+ +L P V AL +++ CG++ T+ LT G ++ G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 532 TVYGQLGNPNADGKL-PCLVEDKLAGESVEEIA-CGAYHV-AVLTSRNEVYTWGK 583
YGQLG N + L P + + E V EIA C + H A T VY WG+
Sbjct: 260 NTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 266 (98.7 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 77/286 (26%), Positives = 125/286 (43%)
Query: 251 DNVVKAGADKNVNYLGT--RADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTW 307
D V G + + N LGT L+P+ LE+ + ++ G H L T G V+ W
Sbjct: 41 DEVFVFGLNYS-NCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAW 99
Query: 308 GEESGGRLGHGVGKDIVQP-HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
G +LG+G + P + +L + V V CG H+ A+ GE++ WG +N
Sbjct: 100 GHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG--YNNC 157
Query: 367 GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
G +G G+ + P++++ L +V + CG + + G+++ +G G LG G+
Sbjct: 158 GQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 427 RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
N P V +L + + CG HT A+ + G L+ WG +LG
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD-----------EGLLYAWGANTYGQLG 266
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
G+K L P + + AC HS + T GHV+ G
Sbjct: 267 TGNKNNLLSPAHIMVEKERVVEIAAC-HSAHTSAAKTQGGHVYMWG 311
Score = 250 (93.1 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 80/304 (26%), Positives = 136/304 (44%)
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
++ P + S+ V + E VT E++ +G N LG G + S +PK+
Sbjct: 12 LLSPQEIASIRKACVFGTSANE--ALYVTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKK 67
Query: 383 ISGPLEGLQVASVTCGPW-HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV-ESLS 440
+ L G ++ S++ G H L T G ++ +G + LG+G P +V +L
Sbjct: 68 LEA-LCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL 126
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
+ + VACG H+ A+ + G++F WG + ++G G + P V
Sbjct: 127 IKQVVEVACGSHHSMALA-----------ADGEVFAWGYNNCGQVGSGSTTNQPTPRKVT 175
Query: 501 ALIDYN-FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESV 559
+ +ACG + ++ + +G V+ G GQLG N +L + L V
Sbjct: 176 NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCV 235
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSN 619
+I CG H LT +Y WG G+LG G+ + +PA + K+R V+ AC S
Sbjct: 236 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSA 295
Query: 620 YSAA 623
+++A
Sbjct: 296 HTSA 299
Score = 232 (86.7 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 74/257 (28%), Positives = 117/257 (45%)
Query: 374 DVSHWIPKRISGPLE--GLQVASVTCGPWHTAL-ITSTGQLFTFGDGTFGVLGHGDRKNV 430
DV W + P E ++ A V + AL +T ++F FG LG GD ++
Sbjct: 3 DVGKWPIFTLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQST 62
Query: 431 SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
P+++E+L G + +++ G + V++ S G ++ WG ++LG+G
Sbjct: 63 LVPKKLEALCGKKIKSLSYG-----SGPHVLL-----STEDGVVYAWGHNGYSQLGNGTT 112
Query: 491 EPRLKP--TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LP 547
+ P C LI +VACG ++ L G VF G GQ+G+ + + P
Sbjct: 113 NQGIAPIQVCTNLLIK-QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTP 171
Query: 548 CLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALK 607
V + L + V IACG + EVY WG NG+LG G+ ++ TP V AL
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 608 DRHVKYIACGSNYSAAI 624
V I CG ++ A+
Sbjct: 232 SVCVNQIVCGYAHTLAL 248
Score = 169 (64.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 59/189 (31%), Positives = 84/189 (44%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNV-VLDVHHIACGVRHAALV 298
G+V+ WG C V G+ G+ + PR + + + + V IACG + V
Sbjct: 147 GEVFAWGYNNCGQV---GS-------GSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
GEV+ WG G+LG G + + P + +L V+ + CG HT A+T G LY
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGD- 416
WG T+ G LG G + P I E + V C HT A T G ++ +G
Sbjct: 257 WGANTY--GQLGTGNKNNLLSPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQC 313
Query: 417 -GTFGVLGH 424
G VL H
Sbjct: 314 RGQSVVLPH 322
Score = 134 (52.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG + L P + + + V+ I CG H +T +G ++ WG + G+LG G +++
Sbjct: 215 LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL 274
Query: 325 QP-HLLESLTMTSVDFVTCGEFHTCAV-TMAGELYTWGDGTHNAGLLGHGTDVS 376
P H++ V+ C HT A T G +Y WG + +L H T S
Sbjct: 275 SPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHFS 327
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 314 (115.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 89/294 (30%), Positives = 130/294 (44%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R LE + + H+ACG A +T +G + T+G S G LGHG DI QP ++E+L
Sbjct: 391 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 450
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+ V CG H A++ EL+ WG G + G LG GT SH P+ + P G +
Sbjct: 451 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHCCPQLVPMP-PGQEAQR 507
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP---REVESLSGLRTIAVACGV 451
V CG + ++T GQ G F LG P ++VE + A
Sbjct: 508 VVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLD 567
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
V++ S +SG +T+G +LG + P V L VA
Sbjct: 568 QEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVA 627
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
CG + TV + G VF+ G G+LG + D LP V+ D+ +V ++C
Sbjct: 628 CGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSC 681
Score = 311 (114.5 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 107/353 (30%), Positives = 152/353 (43%)
Query: 291 GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
G A+ V+TWG GG + P L L T V V G V
Sbjct: 309 GPARPAIPPPLSSVYTWG---GG---------LSAPLRLPMLN-TEVVQVAAGRTQKAGV 355
Query: 351 TMAGELYTWGDGTHNAG--LLGHGTDVSHWIPKRISGPLEG---LQVASVTCGPWHTALI 405
T +G L W AG L G + P+ +S LEG + + V CG TA +
Sbjct: 356 TRSGRLILWEAPPLGAGGGALLPGA-IEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACL 414
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
T G + TFG G+ G LGHG ++S P VE+L G + VACG H A + T+
Sbjct: 415 TDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLA----LSTER 470
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
+LF WG GD RLG G +E P VP +V CG ++ LT G
Sbjct: 471 -------ELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQ 523
Query: 526 VFTMGSTVYGQLG-NPNADGKLPC---LVEDKLA----G------ESVEEIACGAYHVAV 571
GS + +LG +P + G+ P VE+ + G E + + G H +
Sbjct: 524 ALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLL 583
Query: 572 LTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
LT+ + YT+G +G+LG + P V+ L+ + +ACG ++ AI
Sbjct: 584 LTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACGDAFTVAI 636
Score = 265 (98.3 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 75/265 (28%), Positives = 119/265 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G+ D+ P +E+ + ++ +ACG H ++ + E+F WG GGRLG G +
Sbjct: 434 GSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCC 493
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GL----LGHGTDVSHWIP 380
P L+ V CG + +T+ G+ G N GL LG +
Sbjct: 494 PQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVE 553
Query: 381 KRI------SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
+ + S PL+ + SV GP H+ L+T++G +TFG G LG R+ P
Sbjct: 554 EAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPC 613
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
V+ L G++ VACG T A+ + G++F+WG G + RLG D++ L
Sbjct: 614 RVQGLQGIKISTVACGDAFTVAIG-----------AEGEVFSWGKGARGRLGRKDEDAGL 662
Query: 495 -KPTCVPALIDYNFHKVACGHSLTV 518
+P + Y V+C H T+
Sbjct: 663 PRPVQLDETHPYTVTSVSCCHGNTL 687
Score = 165 (63.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 53/189 (28%), Positives = 91/189 (48%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH---GVGK 321
LGTR P+ + + + CG+ + ++T G+ G +LG +G+
Sbjct: 485 LGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGE 544
Query: 322 DIVQPH--LLESLTMTSVDF----------VTCGEFHTCAVTMAGELYTWGDGTHNAGLL 369
+ PH + E++T T + V G H+ +T +G+ YT+G H G L
Sbjct: 545 EPA-PHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQH--GQL 601
Query: 370 G-HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK 428
G + VS P R+ G L+G+++++V CG T I + G++F++G G G LG D +
Sbjct: 602 GTNARRVSR-APCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKD-E 658
Query: 429 NVSYPREVE 437
+ PR V+
Sbjct: 659 DAGLPRPVQ 667
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 317 (116.6 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 80/213 (37%), Positives = 115/213 (53%)
Query: 288 IACGVRHA-ALVTRQG-EVFTWGEESGGRLGHG-VGKDIVQPHLLESLTMTSVDFVTCGE 344
I CG H+ AL QG E+F WG+ G+LG G + I P L+E L+ + ++ G+
Sbjct: 140 ITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGK 199
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 404
H+ A++M+G +Y+WG ++ G LG G P I L+ +V + CG HTAL
Sbjct: 200 AHSMALSMSGNIYSWG--RNDLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGGSHTAL 256
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGV-WHTAAVVEVIVT 463
+T G +FTFG G +G LGH +N PR V L+G R VACG WHT A V +
Sbjct: 257 LTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDL-- 314
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKP 496
GK+F++G G + +LG+G +L P
Sbjct: 315 --------GKVFSFGSGKEGQLGNGGTHNQLIP 339
Score = 282 (104.3 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 73/233 (31%), Positives = 125/233 (53%)
Query: 387 LEGLQVASVTCGPWHTALITST--GQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSGLR 443
L+ + +TCG +H+ ++ G+LF +G G LG G ++ P+ VE LSG+
Sbjct: 132 LQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVP 191
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
+ ++ G H+ A+ S+S G +++WG D +LG G P+ + AL
Sbjct: 192 LVQISAGKAHSMAL----------SMS-GNIYSWGRNDLGQLGLGHTNGEDFPSLIEALD 240
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEI 562
+ +ACG S T LT G VFT G+ YGQLG+ + +L P LV + LAG V ++
Sbjct: 241 NQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTE-LAGNRVTQV 299
Query: 563 ACGA-YH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
ACG+ +H +A ++ +V+++G G G+LG+G ++ P ++ + +K+
Sbjct: 300 ACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKF 352
Score = 252 (93.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 72/269 (26%), Positives = 124/269 (46%)
Query: 283 LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ +H + G H +++ G+ F + + H + L S+ +TC
Sbjct: 94 MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHASRFQCI-------LQEKSIIQITC 142
Query: 343 GEFHTCAVT--MAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW 400
G++H+ A++ GEL+ WG H G LG G + ++ L G+ + ++ G
Sbjct: 143 GDYHSLALSKGQGGELFAWGQNLH--GQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKA 200
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEV 460
H+ ++ +G ++++G G LG G +P +E+L + +ACG HTA
Sbjct: 201 HSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTA----- 255
Query: 461 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACG---HSLT 517
++T+ G +FT+G G +LGH + L+P V L +VACG H+L
Sbjct: 256 LLTKD------GLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLA 309
Query: 518 VGLTTSGHVFTMGSTVYGQLGNPNADGKL 546
++ G VF+ GS GQLGN +L
Sbjct: 310 Y-VSDLGKVFSFGSGKEGQLGNGGTHNQL 337
Score = 225 (84.3 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 56/178 (31%), Positives = 89/178 (50%)
Query: 445 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALI 503
I + CG +H+ A+ + G+LF WG +LG G + P V L
Sbjct: 138 IQITCGDYHSLAL---------SKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLS 188
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEI 562
+++ G + ++ L+ SG++++ G GQLG + +G+ P L+E L + VE +
Sbjct: 189 GVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIE-ALDNQKVEFL 247
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
ACG H A+LT V+T+G G G+LGH ++ P LV L V +ACGS +
Sbjct: 248 ACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRW 305
Score = 182 (69.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 39/120 (32%), Positives = 66/120 (55%)
Query: 509 KVACG--HSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC--LVEDKLAGESVEEIAC 564
++ CG HSL + G +F G ++GQLG +P LVE L+G + +I+
Sbjct: 139 QITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEH-LSGVPLVQISA 197
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G H L+ +Y+WG+ G+LG G P+L+EAL ++ V+++ACG +++A +
Sbjct: 198 GKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALL 257
Score = 155 (59.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 51/160 (31%), Positives = 80/160 (50%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G++Y WG +++ + G LG P +E+ V +ACG H AL+T
Sbjct: 209 GNIYSWGR---NDLGQLG-------LGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLT 258
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE-FHTCA-VTMAGELY 357
+ G VFT+G G+LGH ++ ++P L+ L V V CG +HT A V+ G+++
Sbjct: 259 KDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGKVF 318
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPL-EGLQVASVT 396
++G G G LG+G + IP + P E L+ S T
Sbjct: 319 SFGSGKE--GQLGNGGTHNQLIPLPMKLPSNEELKFESRT 356
Score = 37 (18.1 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
PK+ + +++ SV G H +++S G+ F +
Sbjct: 84 PKKCIKLGKKMKIHSVDQGAEHMLILSSDGKPFEY 118
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 291 (107.5 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 94/299 (31%), Positives = 139/299 (46%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMT-SVDFVTCGEFHTCAVTMAGELYTWGDG 362
+F WG S G+LG G +D++ P L SV +T G H+ VT G+L+ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 363 THNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH-TALITSTGQLFTFGDGTFGV 421
LGH D+ ++ P + L G + V CG W T ++T GQ+ + G +FG
Sbjct: 77 KDGQLGLGHTEDIPYFTPCK---SLFGCPIQQVACG-WDFTIMLTENGQVLSCGSNSFGQ 132
Query: 422 LG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
LG HG R+ V P+ +E L + + +A G+ H AV A+ +SG +F WG
Sbjct: 133 LGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRH--AV---------AATASGIVFQWGT 179
Query: 480 GDKN---RLGHGDKEPRL----KPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST 532
G + RL G P +P+ V L + V G + LT +G V+ GS
Sbjct: 180 GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 239
Query: 533 VYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQL N A +P +E E V I G H+ T +++TWG+ G+LG
Sbjct: 240 KHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 84/287 (29%), Positives = 125/287 (43%)
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
A A L+ WG ++ LGH DV +P++++ + V +T G H+A++T
Sbjct: 10 AAPAAAALFAWGANSYGQLGLGHKEDVL--LPQQLNDFCKPRSVRRITGGGGHSAVVTDG 67
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
G LF G G LG G +++ Y +SL G VACG W +++T++
Sbjct: 68 GDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACG-WDFT----IMLTEN--- 119
Query: 469 VSSGKLFTWGDGDKNRLG--HGDKEPRLKPTCV-PALIDYNFHKVAC---GHSLTVGLTT 522
G++ + G +LG HG PR CV P I+ + KV C G V T
Sbjct: 120 ---GQVLSCGSNSFGQLGVPHG---PR---RCVVPQAIELHKEKVVCIAAGLRHAVAATA 170
Query: 523 SGHVFTMGSTVYGQLGNPNADGK-LPCLVEDK----LAGESVEEIAC---GAYHVAVLTS 574
SG VF G T G G+ LP K + G + C G+ H A LT
Sbjct: 171 SGIVFQWG-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTD 229
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
EVY WG +G+L + + P +EA ++ K A S ++
Sbjct: 230 AGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWT 275
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 69/227 (30%), Positives = 103/227 (45%)
Query: 411 LFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAVVEVIVTQSSASV 469
LF +G ++G LG G +++V P+++ R++ + G H+A V +
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD---------- 66
Query: 470 SSGKLFTWG---DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
G LF G DG LGH + P P C +L +VACG T+ LT +G V
Sbjct: 67 -GGDLFVCGLNKDGQLG-LGHTEDIPYFTP-C-KSLFGCPIQQVACGWDFTIMLTENGQV 122
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVED--KLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
+ GS +GQLG P+ G C+V +L E V IA G H T+ V+ WG G
Sbjct: 123 LSCGSNSFGQLGVPH--GPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG 180
Query: 585 ---ANGRLGHGDVED----RKTPALVEALKDRHVKYIACGSNYSAAI 624
RL G K P+ V L++ + GS++SA++
Sbjct: 181 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 82/290 (28%), Positives = 125/290 (43%)
Query: 265 LGTRADVLLPRPLESNVV-LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
LG + DVLLP+ L V I G H+A+VT G++F G G+LG G +DI
Sbjct: 30 LGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDI 89
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG--HGTDVSHWIPK 381
+SL + V CG T +T G++ + G +++ G LG HG +P+
Sbjct: 90 PYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCG--SNSFGQLGVPHGPRRCV-VPQ 146
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV---LGHGDRKNVSY----PR 434
I L +V + G H T++G +F +G G L G + + P
Sbjct: 147 AIE--LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPS 204
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
V L + + V G H+A++ + +G+++ WG N+ G E
Sbjct: 205 RVTGLENSKAMCVLAGSDHSASLTD-----------AGEVYVWGS---NKHGQLANEAAF 250
Query: 495 KPTCVPALID---YNFHKVAC---GHSLTVGLTTSGHVFTMGSTVYGQLG 538
P VP I+ + KV G + V T +G +FT G YGQLG
Sbjct: 251 LP--VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 137 (53.3 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 48/167 (28%), Positives = 75/167 (44%)
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT-----CVPALIDYNFHKVACGHSLTVG 519
S A+ ++ LF WG +LG G KE L P C P + ++ G +
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSV----RRITGGGGHSAV 63
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEV 578
+T G +F G GQLG + + +P K L G ++++ACG +LT +V
Sbjct: 64 VTDGGDLFVCGLNKDGQLGLGHTED-IPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQV 122
Query: 579 YTWGKGANGRLG--HGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ G + G+LG HG P +E K++ V IA G ++ A
Sbjct: 123 LSCGSNSFGQLGVPHGP-RRCVVPQAIELHKEK-VVCIAAGLRHAVA 167
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 316 (116.3 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 82/257 (31%), Positives = 134/257 (52%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLT 333
RPL+ V IACG +H+ +T G++F WGE + G+LG + Q P L+SL
Sbjct: 108 RPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLC 167
Query: 334 MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 393
V ++ G H+ ++++G ++ WG +++AG LG G +IP + L G +
Sbjct: 168 GIPVAQISAGGNHSFVLSLSGVVFGWG--SNSAGQLGLGDTTDRFIPTIVKS-LSGKKTV 224
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWH 453
S++CG HTA ++ G +FTFG G FG LGH K+ +PR V L G + V CG H
Sbjct: 225 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 284
Query: 454 TAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD--KEPRLKPTCVPA-LIDYNFHKV 510
T +V + S S +++++G G + +LG+G+ K+ P +P ++ K+
Sbjct: 285 T------LVFEDS----SNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKL 334
Query: 511 ACG--HSLTVGLTTSGH 525
G HS + + G+
Sbjct: 335 IAGENHSFALFFKSPGN 351
Score = 303 (111.7 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 84/249 (33%), Positives = 124/249 (49%)
Query: 386 PLEGL---QVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-HGDRKNVSYPREVESLSG 441
PL+GL QV + CG H+ +T+ GQLF +G+ G LG ++ P+ ++SL G
Sbjct: 109 PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCG 168
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA 501
+ ++ G H+ + S+S G +F WG +LG GD R PT V +
Sbjct: 169 IPVAQISAGGNHSFVL----------SLS-GVVFGWGSNSAGQLGLGDTTDRFIPTIVKS 217
Query: 502 LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVE 560
L ++CG T L+ G VFT GS +GQLG N D P LV + L G V
Sbjct: 218 LSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAE-LWGSKVS 276
Query: 561 EIACGAYHVAVLT-SRNEVYTWGKGANGRLGHGDVEDRKTPALV----EALKDRHVKYIA 615
++ CG +H V S N++Y++G G G+LG+G+ + P V E + K IA
Sbjct: 277 QVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIA 336
Query: 616 CGSNYSAAI 624
G N+S A+
Sbjct: 337 -GENHSFAL 344
Score = 243 (90.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 64/198 (32%), Positives = 104/198 (52%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +++WGE + + + G K GT++ P+ L+S + V I+ G H+ +++
Sbjct: 135 GQLFVWGE---NALGQLGLRKE--QAGTQS----PQHLQSLCGIPVAQISAGGNHSFVLS 185
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G VF WG S G+LG G D P +++SL+ ++CG HT ++ G ++T+
Sbjct: 186 LSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTF 245
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT-STGQLFTFGDGT 418
G G G LGH + P R+ L G +V+ VTCG HT + S+ Q+++FG G
Sbjct: 246 GSG--GFGQLGHNSLKDEHHP-RLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGM 302
Query: 419 FGVLGHGDRKNVSYPREV 436
G LG+G++ S P V
Sbjct: 303 QGQLGNGEQVKQSVPLPV 320
Score = 218 (81.8 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 62/215 (28%), Positives = 101/215 (46%)
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
G + DG V+ D+ V P ++ L + I +ACG H+ A+
Sbjct: 88 GAVLLADDGKVLVM---DQSTVCRP--LKGLENRQVIQIACGDQHSMALT---------- 132
Query: 469 VSSGKLFTWGDGDKNRLG-HGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
+ G+LF WG+ +LG ++ P + +L +++ G + + L+ SG VF
Sbjct: 133 -NDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVF 191
Query: 528 TMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 586
GS GQLG D +P +V+ L+G+ I+CG H A L+ V+T+G G
Sbjct: 192 GWGSNSAGQLGLGDTTDRFIPTIVKS-LSGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 250
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
G+LGH ++D P LV L V + CG +++
Sbjct: 251 GQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHT 285
Score = 184 (69.8 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 50/174 (28%), Positives = 86/174 (49%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
+ I CG A L+ G+V + + + +P L+ L V + CG+
Sbjct: 79 IRSIVCGEAGAVLLADDGKVLVMDQST-----------VCRP--LKGLENRQVIQIACGD 125
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
H+ A+T G+L+ WG+ G LG P+ + L G+ VA ++ G H+
Sbjct: 126 QHSMALTNDGQLFVWGENA--LGQLGLRKEQAGTQSPQHLQS-LCGIPVAQISAGGNHSF 182
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAV 457
+++ +G +F +G + G LG GD + P V+SLSG +T++++CG HTA +
Sbjct: 183 VLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATL 236
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 309 (113.8 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 94/314 (29%), Positives = 140/314 (44%)
Query: 276 PLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT 335
P E+ + A VT EVF +G LG G + + P LE+L
Sbjct: 15 PQETGSIRKACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGK 74
Query: 336 SVDFVTCGEF-HTCAVTMAGELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQVA 393
+ ++ G H T G +Y WG HN LG+GT P ++ L QV
Sbjct: 75 RIKSLSYGSGPHVLLSTEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLVKQVV 131
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVW 452
V CG H+ + + G+LF +G G +G G N PR+V + L + + +ACG
Sbjct: 132 EVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQ- 190
Query: 453 HTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC 512
T S A + SG+++ WG +LG G+ +L P V AL +++ C
Sbjct: 191 ----------TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVC 240
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIA-CGAYHV- 569
G++ T+ LT G ++ G+ YGQLG + + L P + + E V EIA C + H
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTS 298
Query: 570 AVLTSRNEVYTWGK 583
A T VY WG+
Sbjct: 299 AAKTQGGHVYMWGQ 312
Score = 283 (104.7 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 80/286 (27%), Positives = 128/286 (44%)
Query: 251 DNVVKAGADKNVNYLGT--RADVLLPRPLESNVVLDVHHIACGVR-HAALVTRQGEVFTW 307
D V G + + N LGT L+P+ LE+ + ++ G H L T G V+ W
Sbjct: 41 DEVFVFGLNYS-NCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAW 99
Query: 308 GEESGGRLGHGVGKDIVQP-HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA 366
G +LG+G + P + +L + V V CG H+ A+ GEL+ WG +N
Sbjct: 100 GHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWG--YNNC 157
Query: 367 GLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
G +G G+ + P++++ L +V ++ CG + + +G+++ +G G LG G+
Sbjct: 158 GQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 427 RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
N P V +L G+ + CG HT A+ + G L+ WG +LG
Sbjct: 218 NGNQLTPVRVAALHGVCVNQIVCGYAHTLALTD-----------EGLLYAWGANTYGQLG 266
Query: 487 HGDKEPRLKPTCVPALIDYNFHKVACGHSL--TVGLTTSGHVFTMG 530
G K L PT + + AC HS + T GHV+ G
Sbjct: 267 TGSKNNLLSPTQIMVEKERVIEIAAC-HSTHTSAAKTQGGHVYMWG 311
Score = 265 (98.3 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 78/277 (28%), Positives = 127/277 (45%)
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW-HTALITST 408
VT + E++ +G N LG G + S +PK++ L G ++ S++ G H L T
Sbjct: 37 VTDSDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEA-LCGKRIKSLSYGSGPHVLLSTED 93
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREV-ESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
G ++ +G + LG+G P +V +L + + VACG H+ A+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALA--------- 144
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP-ALIDYNFHKVACGHSLTVGLTTSGHV 526
+ G+LF WG + ++G G + P V L +ACG + ++ + SG V
Sbjct: 145 --ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEV 202
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 586
+ G GQLG N +L + L G V +I CG H LT +Y WG
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 587 GRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
G+LG G + +P + K+R ++ AC S +++A
Sbjct: 263 GQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Score = 235 (87.8 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 69/224 (30%), Positives = 110/224 (49%)
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
+T + ++F FG LG GD ++ P+++E+L G R +++ G + V++
Sbjct: 37 VTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYG-----SGPHVLL-- 89
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKP--TCVPALIDYNFHKVACGHSLTVGLTT 522
S G ++ WG ++LG+G + P C L+ +VACG ++ L
Sbjct: 90 ---STEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVK-QVVEVACGSHHSMALAA 145
Query: 523 SGHVFTMGSTVYGQLGNPN-ADGKLPCLVEDKLAGESVEEIACG-AYHVAVLTSRNEVYT 580
G +F G GQ+G+ + A+ P V + L + V IACG +AVL S EVY
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDS-GEVYG 204
Query: 581 WGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
WG NG+LG G+ ++ TP V AL V I CG ++ A+
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLAL 248
Score = 198 (74.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 54/173 (31%), Positives = 81/173 (46%)
Query: 455 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGH 514
A V + +++ S ++F +G N LG GD + L P + AL ++ G
Sbjct: 24 ACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGS 83
Query: 515 SLTVGLTTS-GHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGESVEEIACGAYHVAVL 572
V L+T G V+ G Y QLGN + G P V L + V E+ACG++H L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMAL 143
Query: 573 TSRNEVYTWGKGANGRLGHGDVEDRKTPALV-EALKDRHVKYIACGSNYSAAI 624
+ E++ WG G++G G ++ TP V L + V IACG S A+
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAV 196
Score = 170 (64.9 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNV-VLDVHHIACGVRHAALV 298
G+++ WG C V G+ G+ A+ PR + + + V +IACG + V
Sbjct: 147 GELFAWGYNNCGQV---GS-------GSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAV 196
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
GEV+ WG G+LG G + + P + +L V+ + CG HT A+T G LY
Sbjct: 197 LDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGD- 416
WG T+ G LG G+ + P +I E + + C HT A T G ++ +G
Sbjct: 257 WGANTY--GQLGTGSKNNLLSPTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWGQC 313
Query: 417 -GTFGVLGH 424
G +L H
Sbjct: 314 RGQSVILPH 322
Score = 131 (51.2 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG + L P + + + V+ I CG H +T +G ++ WG + G+LG G +++
Sbjct: 215 LGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLL 274
Query: 325 QPHLLESLTMTSVDFVTCGEFHTCAV-TMAGELYTWGDGTHNAGLLGHGTDVS 376
P + ++ C HT A T G +Y WG + +L H T S
Sbjct: 275 SPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFS 327
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 312 (114.9 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 100/340 (29%), Positives = 163/340 (47%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
++CG H A+VT +++ +G + G+LG G I++P +++L V CG HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGT----DVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
T G +Y G +N G LG G D H I P + ++ ++ G +A
Sbjct: 100 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIV--FFTPADTIK--QLSAGANTSA 153
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
+T G+LF +GD + G +G D+ NV P EV G ++CG +H+A VT
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKPISWISCGYYHSA-----FVT 206
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHGDK--EPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
G+L+T+G+ + +LG ++ P V + + +VACG TV LT
Sbjct: 207 MD------GELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLT 259
Query: 522 TSGHVFTMGSTVYGQLGNPNA--DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVY 579
V+ G +GQLG + P ++E ++ + + I+CG H A++T +Y
Sbjct: 260 EKV-VYAFGLGQFGQLGLGTFLFETSEPKIIE-RIKDQKICHISCGENHTALMTELGLLY 317
Query: 580 TWGKGANGRLGHG--DVEDRKTPALVEALKDRHVKYIACG 617
T+G G +G+LG G + ++ P L V+ IACG
Sbjct: 318 TFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 296 (109.3 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 87/289 (30%), Positives = 142/289 (49%)
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGP 399
++CG+ HT VT +LY +G ++N G LG G+ + P I L+ +V CG
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 96
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAVV 458
HT + T TG ++ G G LG GD + ++ + TI ++ G +AA+
Sbjct: 97 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP--ALIDYNFHKVACGHSL 516
E GKLF WGD + ++G DK C+P + ++CG+
Sbjct: 157 E-----------DGKLFMWGDNSEGQIGLEDKSN----VCIPHEVTVGKPISWISCGYYH 201
Query: 517 TVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAG--ESVEEIACGAYHVAVLTS 574
+ +T G ++T G G+LG PN + + ++ G E V ++ACG H VLT
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPN-ELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 260
Query: 575 RNEVYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSA 622
+ VY +G G G+LG G + + P ++E +KD+ + +I+CG N++A
Sbjct: 261 K-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTA 308
Score = 268 (99.4 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 74/249 (29%), Positives = 122/249 (48%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
+ ++ G +A +T G++F WG+ S G++G ++ PH E + +++CG
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGY 199
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHT 402
+H+ VTM GELYT+G+ + G LG ++ +H P+R+ G E +V V CG HT
Sbjct: 200 YHSAFVTMDGELYTFGEPEN--GKLGLPNELLMNHRSPQRVLGIPE--RVIQVACGGGHT 255
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRK-NVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
++T ++ FG G FG LG G S P+ +E + + ++CG HTA + E+
Sbjct: 256 VVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTEL- 313
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKE--PRLKPTCVPALIDYNFHKVACG--HSLT 517
G L+T+GDG +LG G + + PT + + +ACG H L
Sbjct: 314 ----------GLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLV 363
Query: 518 VGLTTSGHV 526
G +
Sbjct: 364 FATPRLGTI 372
Score = 258 (95.9 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 86/317 (27%), Positives = 150/317 (47%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
LG++A ++ P +++ V ACG H + T G V+ G + G+LG G D
Sbjct: 69 LGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD 128
Query: 325 QPHLLESLTMT-SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
H + T ++ ++ G + A+T G+L+ WGD + G +G + IP +
Sbjct: 129 TFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEV 186
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGL- 442
+ G ++ ++CG +H+A +T G+L+TFG+ G LG + +++ R + + G+
Sbjct: 187 T---VGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIP 242
Query: 443 -RTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVP 500
R I VACG HT + E +V + +G G +LG G +P +
Sbjct: 243 ERVIQVACGGGHTVVLTEKVV------------YAFGLGQFGQLGLGTFLFETSEPKIIE 290
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKL-PCLVEDKLAGE 557
+ D ++CG + T +T G ++T G +G+LG N + P L + L
Sbjct: 291 RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRF- 349
Query: 558 SVEEIACGAYHVAVLTS 574
+V+ IACG H+ V +
Sbjct: 350 AVQLIACGGCHMLVFAT 366
Score = 215 (80.7 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 66/219 (30%), Positives = 104/219 (47%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +++WG DN ++ + L +++V +P E V + I+CG H+A VT
Sbjct: 159 GKLFMWG----DN-----SEGQIG-LEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 206
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM---TSVDFVTCGEFHTCAVTMAGEL 356
GE++T+GE G+LG + +++ H + V V CG HT +T +
Sbjct: 207 MDGELYTFGEPENGKLG--LPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEK-VV 263
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
Y +G G G LG GT + +I ++ ++ ++CG HTAL+T G L+TFGD
Sbjct: 264 YAFGLGQF--GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGD 321
Query: 417 GTFGVLGHGDRK--NVSYPREVESLSGLRTIAVACGVWH 453
G G LG G N +P + +ACG H
Sbjct: 322 GRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360
Score = 188 (71.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 52/184 (28%), Positives = 91/184 (49%)
Query: 445 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID 504
I ++CG HTA IVT + KL+ +G + +LG G K +KPTC+ AL
Sbjct: 38 ICLSCGDEHTA-----IVT------GNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKP 86
Query: 505 YNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIA 563
ACG + T+ T +G V+ G GQLG + D + + +++++++
Sbjct: 87 EKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLS 146
Query: 564 CGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV-EALKDRHVKYIACGSNYSA 622
GA A LT +++ WG + G++G +ED+ + E + + +I+CG +SA
Sbjct: 147 AGANTSAALTEDGKLFMWGDNSEGQIG---LEDKSNVCIPHEVTVGKPISWISCGYYHSA 203
Query: 623 AICL 626
+ +
Sbjct: 204 FVTM 207
Score = 138 (53.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/132 (32%), Positives = 63/132 (47%)
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKLPCLVEDKLAGESVEEIACGAY 567
++CG T +T + ++ GS +GQLG + A K C+ L E V+ ACG
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI--KALKPEKVKLAACGRN 97
Query: 568 HVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT-PALVEALKDRHVKYIACGSNYSAAIC- 625
H V T VY G G+LG GD +DR T +V +K ++ G+N SAA+
Sbjct: 98 HTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 157
Query: 626 ---LHKWVSSAE 634
L W ++E
Sbjct: 158 DGKLFMWGDNSE 169
Score = 47 (21.6 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAV 457
+L+ TG +FTFG F +N+ P + + + I ++CG HTA V
Sbjct: 6 SLVPDTGAVFTFGKTKFA-------ENI--PSKFWFKNDI-PICLSCGDEHTAIV 50
Score = 42 (19.8 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 122 LISSGQGGRSKIDGWNDGGLYLEDSRD 148
L+S+ GG G N+G L L D+ D
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDD 126
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 310 (114.2 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 77/229 (33%), Positives = 121/229 (52%)
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSGLRTI 445
L+ + +TCG +H+ ++ G+LF +G G LG G + S P VE+LSG+ +
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 204
Query: 446 AVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY 505
++ G H+ A+ S+S G +++WG D +LG G + P+C+ AL D
Sbjct: 205 QISAGEAHSMAL----------SMS-GNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQ 253
Query: 506 NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIAC 564
+ACG T LT SG VFT G YGQLG+ + +L P LV L G V +IAC
Sbjct: 254 KVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTG-LVGNRVTQIAC 312
Query: 565 GAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK 612
G H +A ++ +V+++G G G+LG+G ++ P ++ L +K
Sbjct: 313 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELK 361
Score = 281 (104.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 91/361 (25%), Positives = 163/361 (45%)
Query: 255 KAGADKNVNYLGTRAD-VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGG 313
+ GA V+ L +D P+ ++ + +H + G H +++ G+ F +
Sbjct: 79 RGGAGVEVHQLPAGSDGARKPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS--- 135
Query: 314 RLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
+ H + I+Q ++ +TCG++H+ A++ GEL+ WG G LG G
Sbjct: 136 -IEHARFQCILQEK--------NIIQITCGDYHSLALSKGGELFAWGQNLD--GQLGVGR 184
Query: 374 DVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
+ I L G+ + ++ G H+ ++ +G ++++G G LG G N P
Sbjct: 185 IFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESP 244
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
+E+L + +ACG HTA ++T+S G +FT+GDG +LGH +
Sbjct: 245 SCIEALDDQKVEFLACGGCHTA-----LLTKS------GLVFTFGDGKYGQLGHNSTQNE 293
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVG-LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED 552
L+P V L+ ++ACG T+ ++ +G VF+ GS GQLGN +L
Sbjct: 294 LRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMK 353
Query: 553 KLAGESVE-EIACGAYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTPALVEALKDRH 610
L+ E ++ E + + ++ N+ + W + N + RK P L E R
Sbjct: 354 LLSSEELKSESSTSVKELIMVAGGNQSILIWMEKENSYVNLR----RKIPTLNEGTVKRW 409
Query: 611 V 611
+
Sbjct: 410 I 410
Score = 265 (98.3 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 63/202 (31%), Positives = 107/202 (52%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+++ WG+ + D + G A P +E+ + + I+ G H+ ++
Sbjct: 167 GELFAWGQNL-DGQLGVGR--------IFASTSTPEIVENLSGVPLVQISAGEAHSMALS 217
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G V++WG G+LG G + P +E+L V+F+ CG HT +T +G ++T+
Sbjct: 218 MSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTF 277
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGDGT 418
GDG + G LGH + + P+ ++G L G +V + CG HT A ++ TG++F+FG G
Sbjct: 278 GDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 334
Query: 419 FGVLGHGDRKNVSYPREVESLS 440
G LG+G +N PR ++ LS
Sbjct: 335 EGQLGNGGTRNQLIPRPMKLLS 356
Score = 207 (77.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 57/181 (31%), Positives = 86/181 (47%)
Query: 445 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALI 503
I + CG +H+ A+ + G+LF WG +LG G P V L
Sbjct: 151 IQITCGDYHSLALSK-----------GGELFAWGQNLDGQLGVGRIFASTSTPEIVENLS 199
Query: 504 DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEI 562
+++ G + ++ L+ SG+V++ G GQLG + K P +E L + VE +
Sbjct: 200 GVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIE-ALDDQKVEFL 258
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSA 622
ACG H A+LT V+T+G G G+LGH ++ P LV L V IACG ++
Sbjct: 259 ACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTL 318
Query: 623 A 623
A
Sbjct: 319 A 319
Score = 187 (70.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 41/129 (31%), Positives = 73/129 (56%)
Query: 498 CVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN--ADGKLPCLVEDKLA 555
C+ L + N ++ CG ++ L+ G +F G + GQLG A P +VE+ L+
Sbjct: 143 CI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN-LS 199
Query: 556 GESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIA 615
G + +I+ G H L+ VY+WG+ G+LG G ++++P+ +EAL D+ V+++A
Sbjct: 200 GVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLA 259
Query: 616 CGSNYSAAI 624
CG ++A +
Sbjct: 260 CGGCHTALL 268
Score = 126 (49.4 bits), Expect = 0.00068, P = 0.00068
Identities = 41/179 (22%), Positives = 77/179 (43%)
Query: 478 GDG-DKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQ 536
G G + ++L G R KP C+ H + G + L++ G F ++
Sbjct: 81 GAGVEVHQLPAGSDGAR-KPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSI--- 136
Query: 537 LGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV-E 595
+ C++++K ++ +I CG YH L+ E++ WG+ +G+LG G +
Sbjct: 137 -----EHARFQCILQEK----NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFA 187
Query: 596 DRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNC 654
TP +VE L + I+ G +S A+ + V S + C + ++ +C
Sbjct: 188 STSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSC 246
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 300 (110.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 88/290 (30%), Positives = 140/290 (48%)
Query: 356 LYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQVAS------VTCGPWHTALITST 408
+Y WG + +G G IPK++ L G + ++CG HTA + S
Sbjct: 22 IYVWG--YNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASD 79
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
G LF +G +G LG G +P++V+ L V+CG + TAA+ E ++ +
Sbjct: 80 GSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEP--RENDGT 137
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFT 528
+S+ +L+ WG +N+ G PRL PA +V+CG + V L+ G +
Sbjct: 138 LSTSRLWVWG---QNQ---GSNLPRLFSGAFPATTA--IRQVSCGTAHVVALSEEGLLQA 189
Query: 529 MGSTVYGQLGNP-NADG-KLPCLVED--KLAGESVE-----EIACGAYHVAVLTSRNEVY 579
G GQLG +G + P ++ K E+ E +++CG YH A L+ EVY
Sbjct: 190 WGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVY 249
Query: 580 TWGKGANGRLGHGDVE--DRKT-PALVEALKDRHVKYIACGSNYSAAICL 626
TWG G+ G+LGH ++ D++ P V L +K +ACG ++ A+ L
Sbjct: 250 TWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Score = 281 (104.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 100/363 (27%), Positives = 154/363 (42%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
I+CG H A V G +F WG G+LG G P ++ L V FV+CG F T
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCT 125
Query: 348 CAVTMAGELYTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLEGLQ-VASVTCGPWHTALI 405
A+ E DGT + L G + +P+ SG + V+CG H +
Sbjct: 126 AAIAEPRE----NDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVAL 181
Query: 406 TSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSG--------LRTIAVACGVWHTAA 456
+ G L +G G LG G + + PR + + + ++ + ++CG +HTAA
Sbjct: 182 SEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAA 241
Query: 457 VVEVIVTQSSASVSSGKLFTWGDGDKNRLGH-----GDKEPRLKPTCVPALIDYNFHKVA 511
+ + +G+++TWG G +LGH GDKE L P V L + +VA
Sbjct: 242 LSD-----------AGEVYTWGLGSMGQLGHVSLQSGDKE--LIPRRVVGLDGVSMKEVA 288
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNA-------DGKLPCL--VEDKLAGESVEE 561
CG T L+ G ++ G GQLG P + +G L V + V
Sbjct: 289 CGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRL 348
Query: 562 IACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
+ACG H V + WG + G+ + P+ V+ + V+ +A G +S
Sbjct: 349 VACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQ-VRKLAAGGGHS 407
Query: 622 AAI 624
A +
Sbjct: 408 AVL 410
Score = 253 (94.1 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 91/334 (27%), Positives = 140/334 (41%)
Query: 283 LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ------PHLLESLTMTS 336
+D+ I V + + + ++ WG G+ G + +++ P L +
Sbjct: 1 MDIGEIIGEVAPSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGAN 60
Query: 337 VDF--VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+ ++CG HT AV G L+ WG + G LG GT+V PK++ L+ V
Sbjct: 61 SRWLDISCGREHTAAVASDGSLFAWGANEY--GQLGDGTEVGRKHPKKVK-QLQSEFVKF 117
Query: 395 VTCGPWHTALITSTGQLF-TFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA--VACGV 451
V+CG + TA I + T V G N+ PR T V+CG
Sbjct: 118 VSCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNL--PRLFSGAFPATTAIRQVSCGT 175
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDY----- 505
H A+ E G L WG ++ +LG G L+ P + A +
Sbjct: 176 AHVVALSE-----------EGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAP 224
Query: 506 ---NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN---PNADGKL-PCLVEDKLAGES 558
+++CG T L+ +G V+T G GQLG+ + D +L P V L G S
Sbjct: 225 ELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVG-LDGVS 283
Query: 559 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
++E+ACG H L+ +Y WG G G+LG G
Sbjct: 284 MKEVACGGVHTCALSLEGALYAWGGGQAGQLGLG 317
Score = 246 (91.7 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 94/316 (29%), Positives = 136/316 (43%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRL---GHGVGKDIVQPHLLESL--TMTSVDF 339
V ++CG A + E G S RL G G ++ P L T++
Sbjct: 115 VKFVSCGAFCTAAIAEPRE--NDGTLSTSRLWVWGQNQGSNL--PRLFSGAFPATTAIRQ 170
Query: 340 VTCGEFHTCAVTMAGELYTWG---DGTHNAGLLGHGTDVSHWI---PKRISGPLEGLQVA 393
V+CG H A++ G L WG G G+ G I K + E +++
Sbjct: 171 VSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIM 230
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGH-----GDRKNVSYPREVESLSGLRTIAVA 448
++CG +HTA ++ G+++T+G G+ G LGH GD++ + PR V L G+ VA
Sbjct: 231 QLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELI--PRRVVGLDGVSMKEVA 288
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE---------PRLKPTCV 499
CG HT A+ S+ G L+ WG G +LG G + + V
Sbjct: 289 CGGVHTCAL----------SLE-GALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNV 337
Query: 500 PAL-IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPCLVEDKLAGE 557
P L I + VACGHS T+ G + G YGQ N + P V D G+
Sbjct: 338 PVLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPV-DWCVGQ 396
Query: 558 SVEEIACGAYHVAVLT 573
V ++A G H AVLT
Sbjct: 397 -VRKLAAGGGHSAVLT 411
Score = 200 (75.5 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 56/195 (28%), Positives = 93/195 (47%)
Query: 278 ESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH----GVGKDIVQPHLLESLT 333
E+ ++ + ++CG H A ++ GEV+TWG S G+LGH K+++ P + L
Sbjct: 222 EAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELI-PRRVVGLD 280
Query: 334 MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG---------TDVSHWIPKRIS 384
S+ V CG HTCA+++ G LY WG G AG LG G ++ S + + +
Sbjct: 281 GVSMKEVACGGVHTCALSLEGALYAWGGG--QAGQLGLGPQSGFFFSVSNGSEMLLRNVP 338
Query: 385 GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRT 444
+ V V CG HT + G++ +G ++G + YP V+ G +
Sbjct: 339 VLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QV 397
Query: 445 IAVACGVWHTAAVVE 459
+A G H+A + +
Sbjct: 398 RKLAAGGGHSAVLTD 412
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/116 (29%), Positives = 57/116 (49%)
Query: 517 TVGLTTSGHVFTMGSTVYGQLGNPNADG--KLPCLVEDKL----AGESVE--EIACGAYH 568
+V + T ++ G GQ G + ++P + +L AG + +I+CG H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 569 VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
A + S ++ WG G+LG G RK P V+ L+ VK+++CG+ +AAI
Sbjct: 73 TAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAI 128
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 53/223 (23%), Positives = 91/223 (40%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
DA G+VY WG + G +V+ L + L+PR + + + +ACG H
Sbjct: 244 DA-GEVYTWG------LGSMGQLGHVS-LQSGDKELIPRRVVGLDGVSMKEVACGGVHTC 295
Query: 297 LVTRQGEVFTWGEESGGRLGHGV----------GKDIVQPHLLESLTMTSVDFVTCGEFH 346
++ +G ++ WG G+LG G G +++ ++ + T V V CG H
Sbjct: 296 ALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSH 355
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
T G + WG ++ G + W P + + G QV + G H+A++T
Sbjct: 356 TLVYMREGRICGWGYNSY--GQAANEKSSYAWYPSPVDWCV-G-QVRKLAAGGGHSAVLT 411
Query: 407 STGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L + F + + N S ++V G +A C
Sbjct: 412 DAFSLKELCE--FQLADSVNLSNASEIQDVAFRMGSEALARLC 452
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 306 (112.8 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 80/257 (31%), Positives = 131/257 (50%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLT 333
RPL+S V IACG +H+ ++ G++F WGE + G+LG + Q P L+SL
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLC 166
Query: 334 MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 393
V ++ G H+ ++++G ++ WG +++AG LG G ++P + L G +
Sbjct: 167 EIPVAQISAGGNHSFVLSLSGVVFGWG--SNSAGQLGLGDTKDRFVPTIVKS-LCGKKTV 223
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWH 453
S++CG HTA ++ G +FTFG G FG LGH K+ +PR + L G + V CG H
Sbjct: 224 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHH 283
Query: 454 TAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGD--KEPRLKPTCVPA-LIDYNFHKV 510
T E SS ++++G G + +LG+G+ K+ P +P ++ K+
Sbjct: 284 TLVFEE----------SSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKL 333
Query: 511 ACG--HSLTVGLTTSGH 525
G HS + G+
Sbjct: 334 ITGEHHSFALFFKNPGN 350
Score = 279 (103.3 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 69/217 (31%), Positives = 109/217 (50%)
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-HGDRKNVSYPREVESLSGLRTI 445
LE QV + CG H+ +++ GQLF +G+ T G LG ++ P+ ++SL +
Sbjct: 112 LENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVA 171
Query: 446 AVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY 505
++ G H+ + S+S G +F WG +LG GD + R PT V +L
Sbjct: 172 QISAGGNHSFVL----------SLS-GVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGK 220
Query: 506 NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIAC 564
++CG T L+ G VFT GS +GQLG N D P L+ + L G V ++ C
Sbjct: 221 KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAE-LWGSKVSQVTC 279
Query: 565 GAYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTP 600
G +H V ++ +Y++G G G+LG+G+ + P
Sbjct: 280 GRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
Score = 241 (89.9 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 64/198 (32%), Positives = 103/198 (52%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +++WGE + + G K GT++ P+ L+S + V I+ G H+ +++
Sbjct: 134 GQLFVWGE---NTHGQLGLRKE--QAGTQS----PQHLQSLCEIPVAQISAGGNHSFVLS 184
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G VF WG S G+LG G KD P +++SL ++CG HT ++ G ++T+
Sbjct: 185 LSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTF 244
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQL-FTFGDGT 418
G G G LGH + P+ I+ L G +V+ VTCG HT + + +L ++FG G
Sbjct: 245 GSG--GFGQLGHNSLKDEHHPRLIA-ELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGM 301
Query: 419 FGVLGHGDRKNVSYPREV 436
G LG+G++ S P V
Sbjct: 302 QGQLGNGEQVKQSVPLPV 319
Score = 220 (82.5 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 56/190 (29%), Positives = 93/190 (48%)
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG-HGDKEP 492
R ++SL + I +ACG H+ A+ + G+LF WG+ +LG ++
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMALS-----------NDGQLFVWGENTHGQLGLRKEQAG 155
Query: 493 RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVE 551
P + +L + +++ G + + L+ SG VF GS GQLG D +P +V+
Sbjct: 156 TQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVK 215
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
L G+ I+CG H A L+ V+T+G G G+LGH ++D P L+ L V
Sbjct: 216 S-LCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKV 274
Query: 612 KYIACGSNYS 621
+ CG +++
Sbjct: 275 SQVTCGRHHT 284
Score = 193 (73.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 51/174 (29%), Positives = 88/174 (50%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
+ I CG A L+ G+V + + + +P L+SL V + CG+
Sbjct: 78 IRSIVCGEAGAVLLADDGKVLIMDQST-----------VCRP--LKSLENRQVIQIACGD 124
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
H+ A++ G+L+ WG+ TH G LG P+ + E + VA ++ G H+
Sbjct: 125 QHSMALSNDGQLFVWGENTH--GQLGLRKEQAGTQSPQHLQSLCE-IPVAQISAGGNHSF 181
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAV 457
+++ +G +F +G + G LG GD K+ P V+SL G +T++++CG HTA +
Sbjct: 182 VLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Score = 167 (63.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 37/118 (31%), Positives = 62/118 (52%)
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKLPCLVEDKLAGESVEEIACGA 566
++ACG ++ L+ G +F G +GQLG A + P ++ L V +I+ G
Sbjct: 119 QIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQS-LCEIPVAQISAGG 177
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
H VL+ V+ WG + G+LG GD +DR P +V++L + I+CG ++A +
Sbjct: 178 NHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Score = 51 (23.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L+ ++ S+ CG L+ G++ D+ V P ++SL + I
Sbjct: 73 LQNERIRSIVCGEAGAVLLADDGKVLIM-----------DQSTVCRP--LKSLENRQVIQ 119
Query: 447 VACGVWHTAAV 457
+ACG H+ A+
Sbjct: 120 IACGDQHSMAL 130
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 306 (112.8 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 87/273 (31%), Positives = 130/273 (47%)
Query: 362 GTHNAGLLGHGTDVSHWIPKRISGPLEGL---QVASVTCGPWHTALITSTGQLFTFGDGT 418
G + A LL G V PL+GL QV + CG H+ +T+ GQLF +G+
Sbjct: 87 GEYGAVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENA 146
Query: 419 FGVLG-HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
G LG ++ PR ++SL G+ ++ G H+ + S+S G +F W
Sbjct: 147 LGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVL----------SLS-GVVFGW 195
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
G +LG GD R PT V +L ++CG T L G VFT GS +GQL
Sbjct: 196 GGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQL 255
Query: 538 G-NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNE-VYTWGKGANGRLGHGDVE 595
G N D P LV + L G V ++ CG H V T+ + +Y++G G G+LG+G+
Sbjct: 256 GHNSFKDEHHPRLVAE-LWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQV 314
Query: 596 DRKTPALVEALKDRHVKY----IACGSNYSAAI 624
+ P V+ + + +Y + G N+S A+
Sbjct: 315 KQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347
Score = 297 (109.6 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 74/232 (31%), Positives = 124/232 (53%)
Query: 276 PLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTM 334
PL+ V IACG +H+ +T G++F WGE + G+LG + Q P L+SL
Sbjct: 111 PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCG 170
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
V ++ G H+ ++++G ++ WG ++AG LG G ++P ++ L+ ++ S
Sbjct: 171 IPVAQISAGGNHSFVLSLSGVVFGWGG--NSAGQLGLGDTTDRFVPTVVNS-LKRKKIVS 227
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHT 454
++CG HTA + G +FTFG G FG LGH K+ +PR V L G + V CG HT
Sbjct: 228 ISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHT 287
Query: 455 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
+V+ +S + ++++G G + +LG+G++ + P V +YN
Sbjct: 288 ------LVSTASPKL----IYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYN 329
Score = 248 (92.4 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 66/199 (33%), Positives = 105/199 (52%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G +++WGE + + + G K GT++ PR L+S + V I+ G H+ +++
Sbjct: 137 GQLFVWGE---NALGQLGLRKE--QAGTQS----PRHLQSLCGIPVAQISAGGNHSFVLS 187
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G VF WG S G+LG G D P ++ SL + ++CG HT A+ G ++T+
Sbjct: 188 LSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTF 247
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQL-FTFGDGT 418
G G G LGH + P R+ L G +V+ VTCG HT + T++ +L ++FG G
Sbjct: 248 GSG--GFGQLGHNSFKDEHHP-RLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGM 304
Query: 419 FGVLGHGDRKNVSYPREVE 437
G LG+G++ S P V+
Sbjct: 305 QGQLGNGEQVKQSVPLPVD 323
Score = 206 (77.6 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 64/227 (28%), Positives = 101/227 (44%)
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNV-SYPREVESLSGL---RTIAVACGVWHTAA 456
H L +T +L G+ +L G + + E L GL + I +ACG H+ A
Sbjct: 73 HLQLKKNTIRLIVCGEYGAVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMA 132
Query: 457 VVEVIVTQSSASVSSGKLFTWGDGDKNRLG-HGDKEPRLKPTCVPALIDYNFHKVACGHS 515
+ + G+LF WG+ +LG ++ P + +L +++ G +
Sbjct: 133 LT-----------NDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGN 181
Query: 516 LTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTS 574
+ L+ SG VF G GQLG D +P +V + L + + I+CG H A L
Sbjct: 182 HSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVV-NSLKRKKIVSISCGGEHTAALAK 240
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
V+T+G G G+LGH +D P LV L V + CG N++
Sbjct: 241 GGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHT 287
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 306 (112.8 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 73/234 (31%), Positives = 126/234 (53%)
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLS 440
R L+ ++ +TCG +H+ ++ G+LF +G G LG G + + + P+ VE L+
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
G+ ++ G H+ A+ S+S G +++WG + +LG G E + P+ +
Sbjct: 190 GVPLAQISAGEAHSMAL----------SMS-GNIYSWGKNECGQLGLGHTESKDDPSLIE 238
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESV 559
L + VACG S + LT G +FT G+ +GQLG+ + +L PCLV + L G V
Sbjct: 239 GLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAE-LVGYRV 297
Query: 560 EEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK 612
+IACG +H +A ++ +V+++G G +G+LG+G D+ P V+ +K
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
Score = 295 (108.9 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 89/336 (26%), Positives = 151/336 (44%)
Query: 255 KAGADKNVNYL-GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGG 313
+ GA V+ L P+ ++ + +H + G H +++ G+ F + S
Sbjct: 68 RGGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-- 125
Query: 314 RLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
+ H + I+Q + +TCG++H+ A++ GEL+ WG H G LG G
Sbjct: 126 -MKHLRFESILQEKKIIQ--------ITCGDYHSLALSKGGELFAWGQNLH--GQLGVGR 174
Query: 374 DVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
+I L G+ +A ++ G H+ ++ +G ++++G G LG G ++ P
Sbjct: 175 KFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP 234
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
+E L + VACG H+A ++TQ G LFT+G G +LGH +
Sbjct: 235 SLIEGLDNQKVEFVACGGSHSA-----LLTQD------GLLFTFGAGKHGQLGHNSTQNE 283
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVGLTTS-GHVFTMGSTVYGQLGNPNA-DGKLPCLVE 551
L+P V L+ Y ++ACG T+ + G VF+ GS GQLGN D +P V+
Sbjct: 284 LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNE-VYTWGKGAN 586
+ E E + ++ N+ + W K N
Sbjct: 344 VSSSEELKLESHTSEKELIMIAGGNQSILLWIKKEN 379
Score = 230 (86.0 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 61/200 (30%), Positives = 98/200 (49%)
Query: 426 DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
D ++ + R L + I + CG +H+ A+ + G+LF WG +L
Sbjct: 122 DNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----------GGELFAWGQNLHGQL 170
Query: 486 GHGDKEPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG 544
G G K P P V L +++ G + ++ L+ SG++++ G GQLG + +
Sbjct: 171 GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTES 230
Query: 545 KL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
K P L+E L + VE +ACG H A+LT ++T+G G +G+LGH ++ P LV
Sbjct: 231 KDDPSLIEG-LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV 289
Query: 604 EALKDRHVKYIACGSNYSAA 623
L V IACG ++ A
Sbjct: 290 AELVGYRVTQIACGRWHTLA 309
Score = 194 (73.4 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKLPCLVEDKLAGESVEEIACGA 566
++ CG ++ L+ G +F G ++GQLG P +VE LAG + +I+ G
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH-LAGVPLAQISAGE 200
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
H L+ +Y+WGK G+LG G E + P+L+E L ++ V+++ACG ++SA +
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Score = 164 (62.8 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 48/160 (30%), Positives = 84/160 (52%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G++Y WG+ C + + + ++ D L L++ V +ACG H+AL+T
Sbjct: 210 GNIYSWGKNECGQL-------GLGHTESKDDPSLIEGLDNQ---KVEFVACGGSHSALLT 259
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCA-VTMAGELYT 358
+ G +FT+G G+LGH ++ ++P L+ L V + CG +HT A V+ G++++
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFS 319
Query: 359 WGDGTHNAGLLGHG--TDVSHWIPKRISGPLEGLQVASVT 396
+G G G LG+G D +P ++S E L++ S T
Sbjct: 320 FGSGKD--GQLGNGGTRDQLMPLPVKVSSS-EELKLESHT 356
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 216 (81.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 72/255 (28%), Positives = 109/255 (42%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ--PHLLESLTMTSVDFVTCGEF 345
I+ G H VT G VF WG G+LG K Q P ++ + + V G
Sbjct: 99 ISAGRSHTVSVTDDGRVFAWGSNEHGQLGME-SKFTWQGTPRRVQEIN--DIVQVASGSN 155
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
H A+ G ++ WG+ G H P+ + L G+ + V G H +
Sbjct: 156 HCIALDEGGRVFVWGEQAD--GRCIHR-------PEPVE-QLSGVPIVRVLAGARHCLAL 205
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
+++G +FT+G G LG D + + + V + GL + ACG HT V++T
Sbjct: 206 SASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHT-----VLLTHC 260
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDK-EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
G+ F++G + G G K E R PT V LI + ++A G T+ + G
Sbjct: 261 ------GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KG 313
Query: 525 HVFTMGSTVYGQLGN 539
+ G GQLGN
Sbjct: 314 APYPFGLNSSGQLGN 328
Score = 197 (74.4 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 61/194 (31%), Positives = 86/194 (44%)
Query: 426 DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
D + + P VE LSG+ + V G H A+ SAS G +FTWG + L
Sbjct: 174 DGRCIHRPEPVEQLSGVPIVRVLAGARHCLAL--------SAS---GAVFTWGQNNSGEL 222
Query: 486 GHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADG 544
G D P+ V + + ACG + TV LT G F+ GS GQ G +
Sbjct: 223 GIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEK 282
Query: 545 KL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
+ P V D L G V IA GA H + + Y +G ++G+LG+G + + TP
Sbjct: 283 RTNPTAVSD-LIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKT 340
Query: 604 EALKDRHVKYIACG 617
+ L HV + G
Sbjct: 341 DELD--HVTGVFAG 352
Score = 170 (64.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 71/280 (25%), Positives = 111/280 (39%)
Query: 166 SSPEVSVSLNHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXX 225
S E S S+ +P+S +S + I +++ RSH S + +V GS+
Sbjct: 77 SRTEGSFSI-YPVSWTSSAKI---IQISAGRSHTVSVTDDGRVFAWGSNEH--GQLGMES 130
Query: 226 XXXXXXAPDDCDALGDVY--IWGEVICDNVVKAGADKNVNYLGTRAD---VLLPRPLESN 280
P + D+ G C + + G V G +AD + P P+E
Sbjct: 131 KFTWQGTPRRVQEINDIVQVASGSNHCIALDEGG---RVFVWGEQADGRCIHRPEPVEQL 187
Query: 281 VVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFV 340
+ + + G RH ++ G VFTWG+ + G LG + + + V
Sbjct: 188 SGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEA 247
Query: 341 TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGP 399
CG+ HT +T G +++G G G G V P +S L G V + G
Sbjct: 248 ACGDNHTVLLTHCGRTFSFGSDA--LGQCGFGKKVEKRTNPTAVSD-LIGSHVTRIAAGA 304
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
HT I G + FG + G LG+G S PR+ + L
Sbjct: 305 CHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Score = 168 (64.2 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 50/155 (32%), Positives = 72/155 (46%)
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G++F WG+ R H EP + + VP + +V G + L+ SG VFT G
Sbjct: 164 GRVFVWGEQADGRCIHRP-EPVEQLSGVPIV------RVLAGARHCLALSASGAVFTWGQ 216
Query: 532 TVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGH 591
G+LG + + ++ G V E ACG H +LT +++G A G+ G
Sbjct: 217 NNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGF 276
Query: 592 GD-VEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
G VE R P V L HV IA G+ ++ AIC
Sbjct: 277 GKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC 311
Score = 162 (62.1 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 48/178 (26%), Positives = 82/178 (46%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV---GKDIVQPHLLESLTMTSVDFVT 341
V + CG +H +T+ G++++ G G+LG G G + P + + + ++
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP--VSWTSSAKIIQIS 100
Query: 342 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHW--IPKRISGPLEGLQVASVTCGP 399
G HT +VT G ++ WG H G LG + + W P+R+ + +QVAS G
Sbjct: 101 AGRSHTVSVTDDGRVFAWGSNEH--GQLGMESKFT-WQGTPRRVQEINDIVQVAS---GS 154
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAV 457
H + G++F +G+ D + + P VE LSG+ + V G H A+
Sbjct: 155 NHCIALDEGGRVFVWGE-------QADGRCIHRPEPVEQLSGVPIVRVLAGARHCLAL 205
Score = 162 (62.1 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 57/191 (29%), Positives = 85/191 (44%)
Query: 352 MAGELYTWGDGTHNAGLLG-HGTDVSHWIPKRISG-P--LEGLQVASVTCGPWHTALITS 407
M EL G G G LG ++ + +P+RI G P ++G V SVTCG HT +T
Sbjct: 1 MRAELL--GCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTK 58
Query: 408 TGQLFTFGDGTFGVLGHGDRKNVSYP-REVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G++++ G G LG G R S+ V S + I ++ G HT +V +
Sbjct: 59 DGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTD------- 111
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
G++F WG + +LG K + P V + D +VA G + + L G
Sbjct: 112 ----DGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIALDEGGR 165
Query: 526 VFTMGSTVYGQ 536
VF G G+
Sbjct: 166 VFVWGEQADGR 176
Score = 151 (58.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 54/197 (27%), Positives = 94/197 (47%)
Query: 452 WHTAA-VVEVIVTQS-SASVSS-GKLFTWGDGDKNRLGHGDKEP-RLKPTCVPALIDYNF 507
W ++A ++++ +S + SV+ G++F WG + +LG K + P V + D
Sbjct: 90 WTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIND--I 147
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL---PCLVEDKLAGESVEEIAC 564
+VA G + + L G VF V+G+ ADG+ P VE +L+G + +
Sbjct: 148 VQVASGSNHCIALDEGGRVF-----VWGE----QADGRCIHRPEPVE-QLSGVPIVRVLA 197
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
GA H L++ V+TWG+ +G LG D+ + + V + V ACG N++ +
Sbjct: 198 GARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLL 257
Query: 625 --CLHKWVSSAEQL-QC 638
C + ++ L QC
Sbjct: 258 THCGRTFSFGSDALGQC 274
Score = 145 (56.1 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 57/208 (27%), Positives = 93/208 (44%)
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQ-PHLL----ESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ E+ G G+LG + + +Q P + + T+V VTCGE HT +T G+
Sbjct: 2 RAELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGK 61
Query: 356 LYTWGDGTHNAGLLGHG--TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
+ W G++ G LG G T+ S I +S ++ ++ G HT +T G++F
Sbjct: 62 M--WSVGSNMDGQLGRGSRTEGSFSIYP-VSWT-SSAKIIQISAGRSHTVSVTDDGRVFA 117
Query: 414 FGDGTFGVLGHGDRKN-VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSG 472
+G G LG + PR V+ ++ + + VA G H A+ E G
Sbjct: 118 WGSNEHGQLGMESKFTWQGTPRRVQEINDI--VQVASGSNHCIALDE-----------GG 164
Query: 473 KLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
++F WG+ R H EP + + VP
Sbjct: 165 RVFVWGEQADGRCIHRP-EPVEQLSGVP 191
Score = 138 (53.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLPCLVEDKLAGESVEEIACGAYH 568
V CG TV LT G ++++GS + GQLG + +G + + +I+ G H
Sbjct: 46 VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105
Query: 569 VAVLTSRNEVYTWGKGANGRLG-HGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+T V+ WG +G+LG + TP V+ + D + +A GSN+ A+
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIAL 160
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 216 (81.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 72/255 (28%), Positives = 109/255 (42%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ--PHLLESLTMTSVDFVTCGEF 345
I+ G H VT G VF WG G+LG K Q P ++ + + V G
Sbjct: 99 ISAGRSHTVSVTDDGRVFAWGSNEHGQLGME-SKFTWQGTPRRVQEIN--DIVQVASGSN 155
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
H A+ G ++ WG+ G H P+ + L G+ + V G H +
Sbjct: 156 HCIALDEGGRVFVWGEQAD--GRCIHR-------PEPVE-QLSGVPIVRVLAGARHCLAL 205
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQS 465
+++G +FT+G G LG D + + + V + GL + ACG HT V++T
Sbjct: 206 SASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHT-----VLLTHC 260
Query: 466 SASVSSGKLFTWGDGDKNRLGHGDK-EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
G+ F++G + G G K E R PT V LI + ++A G T+ + G
Sbjct: 261 ------GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KG 313
Query: 525 HVFTMGSTVYGQLGN 539
+ G GQLGN
Sbjct: 314 APYPFGLNSSGQLGN 328
Score = 197 (74.4 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 61/194 (31%), Positives = 86/194 (44%)
Query: 426 DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
D + + P VE LSG+ + V G H A+ SAS G +FTWG + L
Sbjct: 174 DGRCIHRPEPVEQLSGVPIVRVLAGARHCLAL--------SAS---GAVFTWGQNNSGEL 222
Query: 486 GHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADG 544
G D P+ V + + ACG + TV LT G F+ GS GQ G +
Sbjct: 223 GIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEK 282
Query: 545 KL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
+ P V D L G V IA GA H + + Y +G ++G+LG+G + + TP
Sbjct: 283 RTNPTAVSD-LIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKT 340
Query: 604 EALKDRHVKYIACG 617
+ L HV + G
Sbjct: 341 DELD--HVTGVFAG 352
Score = 170 (64.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 71/280 (25%), Positives = 111/280 (39%)
Query: 166 SSPEVSVSLNHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVFRVXXXXXXX 225
S E S S+ +P+S +S + I +++ RSH S + +V GS+
Sbjct: 77 SRTEGSFSI-YPVSWTSSAKI---IQISAGRSHTVSVTDDGRVFAWGSNEH--GQLGMES 130
Query: 226 XXXXXXAPDDCDALGDVY--IWGEVICDNVVKAGADKNVNYLGTRAD---VLLPRPLESN 280
P + D+ G C + + G V G +AD + P P+E
Sbjct: 131 KFTWQGTPRRVQEINDIVQVASGSNHCIALDEGG---RVFVWGEQADGRCIHRPEPVEQL 187
Query: 281 VVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFV 340
+ + + G RH ++ G VFTWG+ + G LG + + + V
Sbjct: 188 SGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEA 247
Query: 341 TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGP 399
CG+ HT +T G +++G G G G V P +S L G V + G
Sbjct: 248 ACGDNHTVLLTHCGRTFSFGSDA--LGQCGFGKKVEKRTNPTAVSD-LIGSHVTRIAAGA 304
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
HT I G + FG + G LG+G S PR+ + L
Sbjct: 305 CHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Score = 168 (64.2 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 50/155 (32%), Positives = 72/155 (46%)
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G++F WG+ R H EP + + VP + +V G + L+ SG VFT G
Sbjct: 164 GRVFVWGEQADGRCIHRP-EPVEQLSGVPIV------RVLAGARHCLALSASGAVFTWGQ 216
Query: 532 TVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGH 591
G+LG + + ++ G V E ACG H +LT +++G A G+ G
Sbjct: 217 NNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGF 276
Query: 592 GD-VEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
G VE R P V L HV IA G+ ++ AIC
Sbjct: 277 GKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC 311
Score = 162 (62.1 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 48/178 (26%), Positives = 82/178 (46%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV---GKDIVQPHLLESLTMTSVDFVT 341
V + CG +H +T+ G++++ G G+LG G G + P + + + ++
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP--VSWTSSAKIIQIS 100
Query: 342 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHW--IPKRISGPLEGLQVASVTCGP 399
G HT +VT G ++ WG H G LG + + W P+R+ + +QVAS G
Sbjct: 101 AGRSHTVSVTDDGRVFAWGSNEH--GQLGMESKFT-WQGTPRRVQEINDIVQVAS---GS 154
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAV 457
H + G++F +G+ D + + P VE LSG+ + V G H A+
Sbjct: 155 NHCIALDEGGRVFVWGE-------QADGRCIHRPEPVEQLSGVPIVRVLAGARHCLAL 205
Score = 162 (62.1 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 57/191 (29%), Positives = 85/191 (44%)
Query: 352 MAGELYTWGDGTHNAGLLG-HGTDVSHWIPKRISG-P--LEGLQVASVTCGPWHTALITS 407
M EL G G G LG ++ + +P+RI G P ++G V SVTCG HT +T
Sbjct: 1 MRAELL--GCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTK 58
Query: 408 TGQLFTFGDGTFGVLGHGDRKNVSYP-REVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
G++++ G G LG G R S+ V S + I ++ G HT +V +
Sbjct: 59 DGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTD------- 111
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEP-RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGH 525
G++F WG + +LG K + P V + D +VA G + + L G
Sbjct: 112 ----DGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIALDEGGR 165
Query: 526 VFTMGSTVYGQ 536
VF G G+
Sbjct: 166 VFVWGEQADGR 176
Score = 151 (58.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 54/197 (27%), Positives = 94/197 (47%)
Query: 452 WHTAA-VVEVIVTQS-SASVSS-GKLFTWGDGDKNRLGHGDKEP-RLKPTCVPALIDYNF 507
W ++A ++++ +S + SV+ G++F WG + +LG K + P V + D
Sbjct: 90 WTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIND--I 147
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL---PCLVEDKLAGESVEEIAC 564
+VA G + + L G VF V+G+ ADG+ P VE +L+G + +
Sbjct: 148 VQVASGSNHCIALDEGGRVF-----VWGE----QADGRCIHRPEPVE-QLSGVPIVRVLA 197
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
GA H L++ V+TWG+ +G LG D+ + + V + V ACG N++ +
Sbjct: 198 GARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLL 257
Query: 625 --CLHKWVSSAEQL-QC 638
C + ++ L QC
Sbjct: 258 THCGRTFSFGSDALGQC 274
Score = 145 (56.1 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 57/208 (27%), Positives = 93/208 (44%)
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQ-PHLL----ESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ E+ G G+LG + + +Q P + + T+V VTCGE HT +T G+
Sbjct: 2 RAELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGK 61
Query: 356 LYTWGDGTHNAGLLGHG--TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
+ W G++ G LG G T+ S I +S ++ ++ G HT +T G++F
Sbjct: 62 M--WSVGSNMDGQLGRGSRTEGSFSIYP-VSWT-SSAKIIQISAGRSHTVSVTDDGRVFA 117
Query: 414 FGDGTFGVLGHGDRKN-VSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSG 472
+G G LG + PR V+ ++ + + VA G H A+ E G
Sbjct: 118 WGSNEHGQLGMESKFTWQGTPRRVQEINDI--VQVASGSNHCIALDE-----------GG 164
Query: 473 KLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
++F WG+ R H EP + + VP
Sbjct: 165 RVFVWGEQADGRCIHRP-EPVEQLSGVP 191
Score = 138 (53.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLPCLVEDKLAGESVEEIACGAYH 568
V CG TV LT G ++++GS + GQLG + +G + + +I+ G H
Sbjct: 46 VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105
Query: 569 VAVLTSRNEVYTWGKGANGRLG-HGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+T V+ WG +G+LG + TP V+ + D + +A GSN+ A+
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIAL 160
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 299 (110.3 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 93/322 (28%), Positives = 142/322 (44%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI 379
G I P L L T V V+ G VT +G L TW + +G V
Sbjct: 326 GSGISTPLRLPMLN-TEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQ 384
Query: 380 PKRISGPLEG---LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
P+ IS LEG + + SV+CG T +T G + TFG G+ G LGHG+ +V+ P+ V
Sbjct: 385 PQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIV 444
Query: 437 ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKP 496
E+L G + V+CG H AV + ++F+WG GD RLG ++ P
Sbjct: 445 EALLGYELVQVSCGASHVLAVT-----------NEREVFSWGRGDNGRLGLATQDSHNCP 493
Query: 497 TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLP---CLVED 552
V D+ +V CG ++ ++T + G+ + +LG G + P C VE+
Sbjct: 494 QQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEE 553
Query: 553 ----------KLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPAL 602
L E + I G H +T + + +T+G +G+LG + P
Sbjct: 554 VHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQ 613
Query: 603 VEALKDRHVKYIACGSNYSAAI 624
V L+ + ACG ++ AI
Sbjct: 614 VSGLQG--ITMAACGDAFTLAI 633
Score = 293 (108.2 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 81/296 (27%), Positives = 133/296 (44%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESL 332
+ R LE + + ++CG +T +G + T+G S G LGHG D+ QP ++E+L
Sbjct: 388 ISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEAL 447
Query: 333 TMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQV 392
+ V+CG H AVT E+++WG G + G LG T SH P+++S P + +
Sbjct: 448 LGYELVQVSCGASHVLAVTNEREVFSWGRGDN--GRLGLATQDSHNCPQQVSLPAD-FEA 504
Query: 393 ASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR---EVESLSGLRTIAVAC 449
V CG + ++++ Q+ G+ F LG P +VE + + + A
Sbjct: 505 QRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAP 564
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHK 509
+++ S A G+ FT+G +LG + P V L
Sbjct: 565 LNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGL--QGITM 622
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
ACG + T+ + G V+T G G+LG D +P V+ D+ +V +AC
Sbjct: 623 AACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVAC 678
Score = 277 (102.6 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 104/360 (28%), Positives = 167/360 (46%)
Query: 284 DVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV---GKDIVQPHL----LESLTMTS 336
+V ++ G VT+ G + TW S G G + +QP LE + +
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPGAVEQMQPQFISRFLEGQSGVT 399
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT--DVSHWIPKRISGPLEGLQVAS 394
+ V+CG+ T +T G + T+G G++ G LGHG DV+ PK + L G ++
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGSN--GCLGHGNFNDVTQ--PKIVEALL-GYELVQ 454
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHT 454
V+CG H +T+ ++F++G G G LG + + + P++V + V CGV
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGV--D 512
Query: 455 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG----HGDKEP----RLKPTCVPALID-- 504
+++ + TQ ++ G+ N+LG G +EP +++ + L+
Sbjct: 513 CSMI--MSTQH-------QILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSA 563
Query: 505 -YNFHKVA---CGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESV 559
N K+ G + +V +T G FT GS +GQLG + ++P V L G +
Sbjct: 564 PLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSG-LQG--I 620
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH---VKYIAC 616
ACG + + EVYTWGKGA GRLG + ED P V+ L + H V +AC
Sbjct: 621 TMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKE-EDFGIPKPVQ-LDESHAFTVTSVAC 678
Score = 218 (81.8 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 73/267 (27%), Positives = 113/267 (42%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G DV P+ +E+ + ++ ++CG H VT + EVF+WG GRLG
Sbjct: 433 GNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNC 492
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG----HGTDVS----- 376
P + V CG C++ M+ + G + LG GT+
Sbjct: 493 PQQVSLPADFEAQRVLCGV--DCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQ 550
Query: 377 ----HWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
H S PL ++ + G H+ +T GQ FTFG G LG R++
Sbjct: 551 VEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRV 610
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP 492
P +V L G+ T+A ACG T A+ + G+++TWG G + RLG +++
Sbjct: 611 PYQVSGLQGI-TMA-ACGDAFTLAIG-----------AEGEVYTWGKGARGRLGRKEEDF 657
Query: 493 RL-KPTCVPALIDYNFHKVACGHSLTV 518
+ KP + + VAC H T+
Sbjct: 658 GIPKPVQLDESHAFTVTSVACCHGNTL 684
Score = 208 (78.3 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 78/267 (29%), Positives = 116/267 (43%)
Query: 368 LLGHGTDVSHWIPKRISGPLEGLQVASV-TCGPWHTALITSTGQLFTFGDGTFGVLGHGD 426
LL TD+ + +RI PL +Q G W ITST T G L
Sbjct: 262 LLNLYTDIGNVKMRRIEKPLSNVQAGPHGRPGGW----ITSTR--------TRGGLSSLT 309
Query: 427 RKNVSYPREVESL----SGLRTIAVACGVWHTAAV-VEVIVTQSSASVSSGKLFTW---- 477
+ +P + S+ SG+ T + + +T + V + TQ SG+L TW
Sbjct: 310 SSKMMHPLPLFSVYTWGSGIST-PLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPS 368
Query: 478 -GDGDKNRLGHGDK-EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYG 535
G G+ G ++ +P+ + V+CG T LT G + T GS G
Sbjct: 369 VGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNG 428
Query: 536 QLGNPNA-DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
LG+ N D P +VE L G + +++CGA HV +T+ EV++WG+G NGRLG
Sbjct: 429 CLGHGNFNDVTQPKIVE-ALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQ 487
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYS 621
+ P V D + + CG + S
Sbjct: 488 DSHNCPQQVSLPADFEAQRVLCGVDCS 514
Score = 177 (67.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 68/304 (22%), Positives = 128/304 (42%)
Query: 372 GTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF-----GDGTFGVLGHGD 426
G+ +S P R+ P+ +V V+ G +T +G+L T+ G G + G +
Sbjct: 326 GSGIS--TPLRL--PMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVE 381
Query: 427 RKNVSY-PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
+ + R +E SG+ +V+CG T + + G + T+G G L
Sbjct: 382 QMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTD-----------RGIIMTFGSGSNGCL 430
Query: 486 GHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK 545
GHG+ +P V AL+ Y +V+CG S + +T VF+ G G+LG D
Sbjct: 431 GHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSH 490
Query: 546 LPCLVEDKLAGE-SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
C + L + + + CG ++++++++ G +LG V + P+
Sbjct: 491 -NCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFC 549
Query: 605 ALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHS 664
+++ H+ + + + ++ + +A + + Q F F +H C H
Sbjct: 550 QVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCS----HR 605
Query: 665 CSSR 668
SSR
Sbjct: 606 RSSR 609
Score = 149 (57.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/210 (23%), Positives = 93/210 (44%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG----HGVG 320
L T+ P+ + + + CGV + +++ Q ++ G +LG G
Sbjct: 484 LATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTE 543
Query: 321 K-----DIVQPHLLE-----SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG 370
+ + + HL + L + ++ G H+ AVT G+ +T+G H G LG
Sbjct: 544 EPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQH--GQLG 601
Query: 371 HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK-N 429
S +P ++SG L+G+ +A+ CG T I + G+++T+G G G LG +
Sbjct: 602 CSHRRSSRVPYQVSG-LQGITMAA--CGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFG 658
Query: 430 VSYPREVESLSGLRTIAVACGVWHTAAVVE 459
+ P +++ +VAC +T V+
Sbjct: 659 IPKPVQLDESHAFTVTSVACCHGNTLLAVK 688
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 298 (110.0 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 84/245 (34%), Positives = 121/245 (49%)
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESL-------- 439
G+++ SV G HT ++ GQ++ +G G G LG G R + VS P + +
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKA 292
Query: 440 --SGLRTIAVA-CGVWHTAAVVEVIV--TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
SG+ +V CG + V ++ S+ +G L T+G G + G G + L
Sbjct: 293 TSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDEL 352
Query: 495 KPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVE-D 552
PTCV +L+ +VA G T ++ G V+ G +GQLG + LP L+E
Sbjct: 353 SPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAP 412
Query: 553 KLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK 612
L +V+ I+CGA H AV+T V+ WG G+LG GDV DR PA V +KD K
Sbjct: 413 NLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPK 471
Query: 613 YIACG 617
IACG
Sbjct: 472 NIACG 476
Score = 267 (99.0 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 61/171 (35%), Positives = 93/171 (54%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
V IACG RH+A++T G + T+G G+ G G D + P + SL ++ V G
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGL 372
Query: 345 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTA 403
+HT + G++Y +G + G LG G D + +PK + P LE + V +++CG HTA
Sbjct: 373 WHTTCASSDGDVYAFGG--NQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTA 430
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHT 454
+IT G++F +G +G LG GD + + P EV + +ACG WHT
Sbjct: 431 VITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHT 480
Score = 228 (85.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 65/191 (34%), Positives = 89/191 (46%)
Query: 385 GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRT 444
G + G V + CG H+A+IT TG L TFG G +G G G + P V SL G+R
Sbjct: 306 GRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRI 365
Query: 445 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV--PAL 502
VA G+WHT AS S G ++ +G +LG G + P + P L
Sbjct: 366 EEVAAGLWHTTC----------AS-SDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNL 414
Query: 503 IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLAGESVEE 561
+ N ++CG T +T G VF G YGQLG + D P E ++ +
Sbjct: 415 ENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPA--EVRIKDCFPKN 472
Query: 562 IACGAYHVAVL 572
IACG +H +L
Sbjct: 473 IACGWWHTLLL 483
Score = 212 (79.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 110/426 (25%), Positives = 173/426 (40%)
Query: 242 VYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQ 301
VY+WG + GA + L + +V +P +ES+ DV CG A
Sbjct: 33 VYMWGYL-------PGASPQRSPLMSPVEVKIPPAVESSWK-DVSGGGCGF--AMATAES 82
Query: 302 GEVFTWGEESG-GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
G++ TWG G+ GK P V G H AVT ++YTWG
Sbjct: 83 GKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWG 142
Query: 361 --DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
+ + G S + IS E QV+S + G + +S + G+ T
Sbjct: 143 WRECIPTGRVFGQVDGDS--CERNISFSTE--QVSSSSQGKKSSGGTSSQVEGRGGGEPT 198
Query: 419 F---------GVLGHGDRKNV---SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSS 466
N+ + P V G+R ++VA G HT A+ ++
Sbjct: 199 KKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDI------ 252
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKE---------PRLKPT-----------------CVP 500
G+++ WG G + +LG G + P ++P+ C
Sbjct: 253 -----GQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGR 307
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVE 560
L Y K+ACG + +T +G + T G +YGQ G + D +L L G +E
Sbjct: 308 VLGSY-VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIE 366
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEA--LKDRHVKYIACGS 618
E+A G +H +S +VY +G G+LG G + P L+EA L++ +VK I+CG+
Sbjct: 367 EVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGA 426
Query: 619 NYSAAI 624
++A I
Sbjct: 427 RHTAVI 432
Score = 40 (19.1 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 124 SSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASD-SSVSLTRDISSPEVSVSL 174
SSG G S+++G GG + R S A++ SS S D+S+ VSL
Sbjct: 181 SSG-GTSSQVEG-RGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSL 230
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 291 (107.5 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 94/299 (31%), Positives = 139/299 (46%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMT-SVDFVTCGEFHTCAVTMAGELYTWGDG 362
+F WG S G+LG G +D++ P L SV +T G H+ VT G+L+ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 363 THNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH-TALITSTGQLFTFGDGTFGV 421
LGH D+ ++ P + L G + V CG W T ++T GQ+ + G +FG
Sbjct: 77 KDGQLGLGHTEDIPYFTPCK---SLFGCPIQQVACG-WDFTIMLTENGQVLSCGSNSFGQ 132
Query: 422 LG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
LG HG R+ V P+ +E L + + +A G+ H AV A+ +SG +F WG
Sbjct: 133 LGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRH--AV---------AATASGIVFQWGT 179
Query: 480 GDKN---RLGHGDKEPRL----KPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST 532
G + RL G P +P+ V L + V G + LT +G V+ GS
Sbjct: 180 GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 239
Query: 533 VYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQL N A +P +E E V I G H+ T +++TWG+ G+LG
Sbjct: 240 KHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 237 (88.5 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 106/393 (26%), Positives = 161/393 (40%)
Query: 265 LGTRADVLLPRPLESNVV-LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
LG + DVLLP+ L V I G H+A+VT G++F G G+LG G +DI
Sbjct: 30 LGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDI 89
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG--HGTDVSHWIPK 381
+SL + V CG T +T G++ + G +++ G LG HG +P+
Sbjct: 90 PYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCG--SNSFGQLGVPHGPRRCV-VPQ 146
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV---LGHGDRKNVSY----PR 434
I L +V + G H T++G +F +G G L G + + P
Sbjct: 147 AIE--LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPS 204
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 494
V L + + V G H+A++ + +G+++ WG N+ G E
Sbjct: 205 RVTGLENSKAMCVLAGSDHSASLTD-----------AGEVYVWGS---NKHGQLANEAAF 250
Query: 495 KPTCVPALID---YNFHKVAC---GHSLTVGLTTSGHVFTMGSTVYGQLGNP-------- 540
P VP I+ + KV G + V T +G +FT G YGQLG
Sbjct: 251 LP--VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWK 308
Query: 541 --NADGKLPCLVEDKLAGES------VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
D LPC S E++CG+ H + Y+WG +G G G
Sbjct: 309 LEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDG 367
Query: 593 DVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ P V+AL + CG+ +S A+C
Sbjct: 368 TEANVWAPKPVQALLSSSGLLVGCGAGHSLALC 400
Score = 208 (78.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 84/287 (29%), Positives = 125/287 (43%)
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
A A L+ WG ++ LGH DV +P++++ + V +T G H+A++T
Sbjct: 10 AAPAAAALFAWGANSYGQLGLGHKEDVL--LPQQLNDFCKPRSVRRITGGGGHSAVVTDG 67
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
G LF G G LG G +++ Y +SL G VACG W +++T++
Sbjct: 68 GDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACG-WDFT----IMLTEN--- 119
Query: 469 VSSGKLFTWGDGDKNRLG--HGDKEPRLKPTCV-PALIDYNFHKVAC---GHSLTVGLTT 522
G++ + G +LG HG PR CV P I+ + KV C G V T
Sbjct: 120 ---GQVLSCGSNSFGQLGVPHG---PR---RCVVPQAIELHKEKVVCIAAGLRHAVAATA 170
Query: 523 SGHVFTMGSTVYGQLGNPNADGK-LPCLVEDK----LAGESVEEIAC---GAYHVAVLTS 574
SG VF G T G G+ LP K + G + C G+ H A LT
Sbjct: 171 SGIVFQWG-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTD 229
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
EVY WG +G+L + + P +EA ++ K A S ++
Sbjct: 230 AGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWT 275
Score = 199 (75.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 69/227 (30%), Positives = 103/227 (45%)
Query: 411 LFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAVVEVIVTQSSASV 469
LF +G ++G LG G +++V P+++ R++ + G H+A V +
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD---------- 66
Query: 470 SSGKLFTWG---DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
G LF G DG LGH + P P C +L +VACG T+ LT +G V
Sbjct: 67 -GGDLFVCGLNKDGQLG-LGHTEDIPYFTP-C-KSLFGCPIQQVACGWDFTIMLTENGQV 122
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVED--KLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
+ GS +GQLG P+ G C+V +L E V IA G H T+ V+ WG G
Sbjct: 123 LSCGSNSFGQLGVPH--GPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG 180
Query: 585 ---ANGRLGHGDVED----RKTPALVEALKDRHVKYIACGSNYSAAI 624
RL G K P+ V L++ + GS++SA++
Sbjct: 181 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
Score = 146 (56.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 49/190 (25%), Positives = 81/190 (42%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS--VDFVTCGEF 345
+ G H+A +T GEV+ WG G+L + + P +E+ + V + G
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPVPQKIEAHCFQNEKVTAIWSGWT 275
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSH-W-IPKR-----ISGPLEGLQ------- 391
H A T G+++TWG + G LG + W + K+ S P +
Sbjct: 276 HLVAQTETGKMFTWGRADY--GQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLT 333
Query: 392 -VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
V+CG H I G +++G G+ G G NV P+ V++L + V CG
Sbjct: 334 GATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 392
Query: 451 VWHTAAVVEV 460
H+ A+ ++
Sbjct: 393 AGHSLALCQL 402
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/167 (28%), Positives = 75/167 (44%)
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT-----CVPALIDYNFHKVACGHSLTVG 519
S A+ ++ LF WG +LG G KE L P C P + ++ G +
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSV----RRITGGGGHSAV 63
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEV 578
+T G +F G GQLG + + +P K L G ++++ACG +LT +V
Sbjct: 64 VTDGGDLFVCGLNKDGQLGLGHTED-IPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQV 122
Query: 579 YTWGKGANGRLG--HGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ G + G+LG HG P +E K++ V IA G ++ A
Sbjct: 123 LSCGSNSFGQLGVPHGP-RRCVVPQAIELHKEK-VVCIAAGLRHAVA 167
Score = 133 (51.9 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 50/184 (27%), Positives = 81/184 (44%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLD--VHHIACGVRH 294
DA G+VY+WG ++K+ A + +P+ +E++ + V I G H
Sbjct: 229 DA-GEVYVWG-----------SNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 276
Query: 295 AALVTRQGEVFTWGEESGGRLGHGV----GKDIVQ----------PHLLESLT--MTSVD 338
T G++FTWG G+LG + G + + P+ + S +T
Sbjct: 277 LVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGAT 336
Query: 339 FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCG 398
V+CG H A+ + G Y+WG H G+ G GT+ + W PK + L + V CG
Sbjct: 337 EVSCGSEHNLAI-IGGVCYSWGWNEH--GMCGDGTEANVWAPKPVQALLSSSGLL-VGCG 392
Query: 399 PWHT 402
H+
Sbjct: 393 AGHS 396
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 143 LEDSRDLTSNSASDSSVSLT 162
LE+S+ + + SD S SLT
Sbjct: 209 LENSKAMCVLAGSDHSASLT 228
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 273 (101.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 87/300 (29%), Positives = 132/300 (44%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS-VDFVTCGEFHTCAVTMAGELYTWGDG 362
+F WG S G+LG G +D++ P L V +T G H+ VT G L+ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLN 76
Query: 363 THNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH-TALITSTGQLFTFGDGTFGV 421
LGH DV ++ + L G + V CG W T ++T GQ+ + G +FG
Sbjct: 77 KDGQLGLGHTEDVLYFT---LCKSLLGCPIQQVACG-WDFTIILTKNGQVLSCGSNSFGQ 132
Query: 422 LG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
LG HG R+ V P+ +E + + +++A G+ H A + +SG +F WG
Sbjct: 133 LGVPHGPRRCV-VPQAIE-VQREKVVSIAAGLRHALA-----------ATASGLVFQWGT 179
Query: 480 G---DKNRLGHGDKEPRLKPTCVPALIDYNFHK-----VACGHSLTVGLTTSGHVFTMGS 531
G RL G P P+ + V G + LT +G ++ GS
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGS 239
Query: 532 TVYGQLGNPNADGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQL + A LP +E + E V + G H+ T +V+TWG+ G+LG
Sbjct: 240 NKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 216 (81.1 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 87/284 (30%), Positives = 132/284 (46%)
Query: 265 LGTRADVLLPRPLESNVVLD-VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
LG + DVLLP+ L V I G H+A+VT QG +F G G+LG G +D+
Sbjct: 30 LGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDV 89
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG--HGTDVSHWIPK 381
+ L +SL + V CG T +T G++ + G +++ G LG HG +P+
Sbjct: 90 LYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCG--SNSFGQLGVPHGPRRCV-VPQ 146
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSG 441
I E +V S+ G H T++G +F +G G L R+ L+
Sbjct: 147 AIEVQRE--KVVSIAAGLRHALAATASGLVFQWGTG----LASSGRRLCPGQTLPLFLTA 200
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVS-SGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
V G+ ++ AV + + SAS++ +G+L+ WG N+ G + P +P
Sbjct: 201 KEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGS---NKHGQLASQAAFLP--LP 255
Query: 501 ALID-YNFH--KVAC---GHSLTVGLTTSGHVFTMGSTVYGQLG 538
I+ + F KVA G + V T +G VFT G YGQLG
Sbjct: 256 QKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 205 (77.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 68/240 (28%), Positives = 109/240 (45%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG--HGVGKD 322
LG DVL +S + + +ACG ++T+ G+V + G S G+LG HG +
Sbjct: 83 LGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGPRRC 142
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGL-LGHGTDVSHWI-- 379
+V P +E + V + G H A T +G ++ WG G ++G L G + ++
Sbjct: 143 VV-PQAIE-VQREKVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCPGQTLPLFLTA 200
Query: 380 --PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVE 437
P +++ LE Q V G H+A +T G+L+ +G G L + P+++E
Sbjct: 201 KEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLA-SQAAFLPLPQKIE 259
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR-LKP 496
+ + VA VW T A +GK+FTWG D +LG + P KP
Sbjct: 260 A-HRFQNEKVAA-VWSGW-------THLVAQTETGKVFTWGRADYGQLGRTLESPEGWKP 310
Score = 192 (72.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 74/246 (30%), Positives = 111/246 (45%)
Query: 411 LFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAVVEVIVTQSSASV 469
LF +G ++G LG G +++V P+++ + + G H+A IVT
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSA-----IVTDQ---- 67
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
G LF G +LG G E L T +L+ +VACG T+ LT +G V +
Sbjct: 68 --GSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSC 125
Query: 530 GSTVYGQLGNPNADGKLPCLVED--KLAGESVEEIACGAYHVAVLTSRNEVYTWGKG--A 585
GS +GQLG P+ G C+V ++ E V IA G H T+ V+ WG G +
Sbjct: 126 GSNSFGQLGVPH--GPRRCVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGTGLAS 183
Query: 586 NGR-LGHGDVED----RKTPALVEA-LKDRHVKYIACGSNYSAAIC----LHKWVSSAE- 634
+GR L G K P+ V L++ + GS +SA++ L+ W S+
Sbjct: 184 SGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHG 243
Query: 635 QLQCSA 640
QL A
Sbjct: 244 QLASQA 249
Score = 192 (72.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 85/288 (29%), Positives = 123/288 (42%)
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
A A L+ WG ++ LGH DV +P+++S + V +T G H+A++T
Sbjct: 10 AAPPATALFAWGANSYGQLGLGHKEDVL--LPQQLSEFCKPGCVKRITGGGGHSAIVTDQ 67
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
G LF G G LG G ++V Y +SL G VACG W +I+T++
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACG-WDFT----IILTKN--- 119
Query: 469 VSSGKLFTWGDGDKNRLG--HGDKEPRLKPTCV-PALIDYNFHKV---ACGHSLTVGLTT 522
G++ + G +LG HG PR CV P I+ KV A G + T
Sbjct: 120 ---GQVLSCGSNSFGQLGVPHG---PR---RCVVPQAIEVQREKVVSIAAGLRHALAATA 170
Query: 523 SGHVFTMGSTVYGQLGNPNADGK-LPCLVEDK-----LAGESVEEIAC---GAYHVAVLT 573
SG VF G T G G+ LP + K G + C G+ H A LT
Sbjct: 171 SGLVFQWG-TGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLT 229
Query: 574 SRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
E+Y WG +G+L P +EA + ++ K A S ++
Sbjct: 230 DAGELYVWGSNKHGQLA-SQAAFLPLPQKIEAHRFQNEKVAAVWSGWT 276
Score = 137 (53.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 49/166 (29%), Positives = 72/166 (43%)
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT-----CVPALIDYNFHKVACGHSLTVG 519
S A+ + LF WG +LG G KE L P C P + GHS V
Sbjct: 8 SEAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITG--GGGHSAIV- 64
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVY 579
T G +F G GQLG + + L + L G ++++ACG +LT +V
Sbjct: 65 -TDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVL 123
Query: 580 TWGKGANGRLG--HGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
+ G + G+LG HG P +E +++ V IA G ++ A
Sbjct: 124 SCGSNSFGQLGVPHGP-RRCVVPQAIEVQREKVVS-IAAGLRHALA 167
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 271 (100.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 94/315 (29%), Positives = 133/315 (42%)
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS-VDFVTCGEFHTCAVTMAGEL 356
V+ +F WG S G+LG G +D++ P L + + VT G H+ VT G L
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGL 70
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH-TALITSTGQLFTFG 415
+ G LGH +V + I PL G + V CG W T ++T GQ+ + G
Sbjct: 71 FVCGLNKDGQLGLGHTEEVLRFT---ICKPLLGCPIRQVACG-WDFTIMLTEKGQVLSCG 126
Query: 416 DGTFGVLG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
FG LG HG RK V P+ +E L + + VA G+ H A + +G
Sbjct: 127 SNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTD-----------TGS 173
Query: 474 LFTWGDG---DKNRLGHGDKEPRLKPTCVPALID-YNFHKVAC---GHSLTVGLTTSGHV 526
F WG G RL G P P+ + V C G + LT +G +
Sbjct: 174 TFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGEL 233
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
+ G +GQL + LP VE E V + G H+ T +V+TWG+
Sbjct: 234 YVWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRAD 293
Query: 586 NGRLGH--GDVEDRK 598
G+LG G E +K
Sbjct: 294 YGQLGRTLGSPEAQK 308
Score = 199 (75.1 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 68/230 (29%), Positives = 103/230 (44%)
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTI-AVACGVWHTAAVVEVIVT 463
+++ LF +G ++G LG G +++V P+++ I +V G H+ V+VT
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHS-----VVVT 65
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
G LF G +LG G E L+ T L+ +VACG T+ LT
Sbjct: 66 DG------GGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEK 119
Query: 524 GHVFTMGSTVYGQLGNPNADGKLPCLVEDKLA--GESVEEIACGAYHVAVLTSRNEVYTW 581
G V + GS +GQLG P+ K C+V + E V +A G H T + W
Sbjct: 120 GQVLSCGSNAFGQLGVPHGPRK--CVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQW 177
Query: 582 GKG--ANGR-LGHGD----VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G G ++GR L G K P+ V L+ V GS++SA++
Sbjct: 178 GTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASL 227
Score = 177 (67.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 74/254 (29%), Positives = 109/254 (42%)
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
AV+ A L+ WG ++ LGH DV +P+++S + + SVT G H+ ++T
Sbjct: 10 AVSAAAVLFAWGANSYGQLGLGHKEDVL--LPQQLSDFCKSGCIKSVTGGGGHSVVVTDG 67
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
G LF G G LG G + V + L G VACG W +++T+
Sbjct: 68 GGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACG-WDFT----IMLTEK--- 119
Query: 469 VSSGKLFTWGDGDKNRLG--HGDKEPRLKPTCVPALIDYNFHKVAC---GHSLTVGLTTS 523
G++ + G +LG HG PR VP I+ KV C G + T +
Sbjct: 120 ---GQVLSCGSNAFGQLGVPHG---PR--KCVVPQAIECLREKVVCVAAGLRHALATTDT 171
Query: 524 GHVFTMGSTVYGQLGNPNADGK-LPCLVEDK----LAGESVEEIAC---GAYHVAVLTSR 575
G F G T G G+ LP + K + G + C G+ H A LT
Sbjct: 172 GSTFQWG-TGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDT 230
Query: 576 NEVYTWGKGANGRL 589
E+Y WG+ +G+L
Sbjct: 231 GELYVWGRNKHGQL 244
Score = 174 (66.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 81/291 (27%), Positives = 127/291 (43%)
Query: 265 LGTRADVLLPRPLESNVVLD-VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
LG + DVLLP+ L + + G H+ +VT G +F G G+LG G +++
Sbjct: 30 LGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEV 89
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG--HGTDVSHWIPK 381
++ + + L + V CG T +T G++ + G G LG HG +P+
Sbjct: 90 LRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAF--GQLGVPHGPRKCV-VPQ 146
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR----KNVSY---PR 434
I E +V V G H T TG F +G G + G R +N+ +
Sbjct: 147 AIECLRE--KVVCVAAGLRHALATTDTGSTFQWGTG---LASSGRRLCPGQNLPLFLTAK 201
Query: 435 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVS-SGKLFTWGDGDKNRLGHGDKEPR 493
E ++GL + V C V A + SAS++ +G+L+ WG +N+ HG
Sbjct: 202 EPSRVTGLESSTVVCAV---AG------SDHSASLTDTGELYVWG---RNK--HGQLASL 247
Query: 494 LKPTCVPALIDYNF---HKVAC---GHSLTVGLTTSGHVFTMGSTVYGQLG 538
+P ++ ++ KV G + V T +G VFT G YGQLG
Sbjct: 248 ATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 54/169 (31%), Positives = 78/169 (46%)
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVG----- 519
S A ++ LF WG +LG G KE L P L D F K C S+T G
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGLGHKEDVLLPQ---QLSD--FCKSGCIKSVTGGGGHSV 62
Query: 520 -LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
+T G +F G GQLG + + L + L G + ++ACG +LT + +V
Sbjct: 63 VVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQV 122
Query: 579 YTWGKGANGRLG--HGDVEDRK--TPALVEALKDRHVKYIACGSNYSAA 623
+ G A G+LG HG RK P +E L+++ V +A G ++ A
Sbjct: 123 LSCGSNAFGQLGVPHGP---RKCVVPQAIECLREK-VVCVAAGLRHALA 167
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 299 (110.3 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 98/338 (28%), Positives = 151/338 (44%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG-VG-KDIVQPHLLESL 332
+P+ S + + A G L++ G+V+ G+ES G +G G K + P L+ SL
Sbjct: 187 QPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSL 246
Query: 333 TMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQV 392
V G + T ++ G++YT+ G N G LGH T+ + P+ + GPLE + V
Sbjct: 247 KNIFVVQAAIGNYFTAVLSREGKVYTFSWG--NDGRLGHQTEAADVEPRPLLGPLENVPV 304
Query: 393 ASVTCGPWHTALITS--TGQ-LFTFGDGTFGVLGHGDRKNVSYPREVESLS--GLRTIAV 447
+ G + + G +++ G G G LGHG R + YPR +E L+ V
Sbjct: 305 VQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVV 364
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 507
A G WH A V + G++ TWG G LGHG++E P V L
Sbjct: 365 AAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKA 413
Query: 508 HKVACGHSLTVGLTTSGHVFTMG---STVYG------QLGNPNADGKLPCLVED-KLAGE 557
VA G T ++ G V++ G S G + GN +A+ P +V K E
Sbjct: 414 VHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNE 473
Query: 558 SVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 590
+ +I+ Y H LT +++ +G G G+LG
Sbjct: 474 RMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 511
Score = 292 (107.8 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 94/297 (31%), Positives = 148/297 (49%)
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHG--TDVSHWIPKRISGPLEGLQVASVTCGPW 400
G H+ AVT GE+YT+G +N+G LGHG D + P R L+G+++ G
Sbjct: 151 GPGHSVAVTSKGEVYTFG--YNNSGQLGHGHTEDEARIQPVR---SLQGVRIIQAAAGAA 205
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDR--KNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
T LI+ G+++ G +FG +G + K V+ P+ V SL + + A G + TA +
Sbjct: 206 RTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLS 265
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGH----GDKEPRLKPTCVPALIDYNFHKVACGH 514
GK++T+ G+ RLGH D EPR P P L + ++A G+
Sbjct: 266 R-----------EGKVYTFSWGNDGRLGHQTEAADVEPR--PLLGP-LENVPVVQIAAGY 311
Query: 515 SLTVGLTTSGH---VFTMGSTVYGQLGNPN-ADGKLPCLVED-KLAGESVEEIACGAYHV 569
+ L + V+++G + G+LG+ + D K P ++E ++ +A GA+H
Sbjct: 312 CYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHA 371
Query: 570 AVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK--YIACGSNYSAAI 624
AV+ V TWG G G LGHG+ E P +VE L HVK ++A G +Y+ +
Sbjct: 372 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLS--HVKAVHVATG-DYTTFV 425
Score = 252 (93.8 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 94/309 (30%), Positives = 145/309 (46%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFT--WGEESGGRLGHGVGKDI 323
GT+ V P+ + S + V A G A+++R+G+V+T WG + GRLGH
Sbjct: 233 GTKP-VTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAAD 289
Query: 324 VQPH-LLESLTMTSVDFVTCGEFHTCAVTMA--G-ELYTWGDGTHNAGLLGHGTDVSHWI 379
V+P LL L V + G + A+ G +Y+ G G G LGHG+
Sbjct: 290 VEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGL--GGKLGHGSRTDEKY 347
Query: 380 PKRISG-PLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
P+ I + LQ V G WH A++ G++ T+G G +G LGHG+ + S P+ VE
Sbjct: 348 PRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEG 407
Query: 439 LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGH-------GDKE 491
LS ++ + VA G + T V + G ++++G G+ LGH G++
Sbjct: 408 LSHVKAVHVATGDYTTFVVSD-----------DGDVYSFGCGESASLGHHPSFDEQGNRH 456
Query: 492 PR-LKPTCVPALIDYNFH--KVACGHSL-----TVGLTTSGHVFTMGSTVYGQLGNP-NA 542
L PT V +L N +++ +S+ T LT SG +F G+ GQLG
Sbjct: 457 ANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGK 516
Query: 543 DGKLPCLVE 551
+ K C+ E
Sbjct: 517 NQKERCVPE 525
Score = 247 (92.0 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 86/308 (27%), Positives = 139/308 (45%)
Query: 291 GVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
G H+ VT +GEV+T+G + G+LGHG +D + + SL + G T +
Sbjct: 151 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLI 210
Query: 351 TMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTG 409
+ G++Y G + A G GT P+ ++ L+ + V G + TA+++ G
Sbjct: 211 SDDGKVYACGKESFGEAEYGGQGTKPVT-TPQLVTS-LKNIFVVQAAIGNYFTAVLSREG 268
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
+++TF G G LGH PR + L + + +A G + A+ + S
Sbjct: 269 KVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALA---CQPNGMS 325
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHK--VACG--HSLTVGLTTSG 524
V ++ G G +LGHG + P + N VA G H+ VG G
Sbjct: 326 V-----YSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVG--QDG 378
Query: 525 HVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGK 583
V T G YG LG+ N + + +P +VE L+ +A G Y V++ +VY++G
Sbjct: 379 RVCTWGWGRYGCLGHGNEECESVPKVVEG-LSHVKAVHVATGDYTTFVVSDDGDVYSFGC 437
Query: 584 GANGRLGH 591
G + LGH
Sbjct: 438 GESASLGH 445
Score = 220 (82.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 68/238 (28%), Positives = 114/238 (47%)
Query: 393 ASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVW 452
+ GP H+ +TS G+++TFG G LGHG ++ + + V SL G+R I A G
Sbjct: 146 SQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAA 205
Query: 453 HTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC 512
T ++++ + GK ++G+ + G G K P P V +L + + A
Sbjct: 206 RT-----MLISDDGKVYACGKE-SFGEAEYG--GQGTK-PVTTPQLVTSLKNIFVVQAAI 256
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACG-AYHVA 570
G+ T L+ G V+T G+LG+ + P + L V +IA G Y +A
Sbjct: 257 GNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLA 316
Query: 571 VLTSRN--EVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV--KYIACGSNYSAAI 624
+ N VY+ G G G+LGHG D K P ++E + ++ + +A G+ ++A +
Sbjct: 317 LACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVV 374
Score = 37 (18.1 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 154 ASDSSVSLTRDISSPEVSVSLNHPISSP 181
A+ + SL + I+ PE SVS P SP
Sbjct: 3 ATSGTPSL-QYINLPEQSVSTTSPPVSP 29
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 291 (107.5 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 89/295 (30%), Positives = 132/295 (44%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R LE + + H+ACG A +T +G + T+G S G LGHG DI QP ++E+L
Sbjct: 374 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 433
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+ V CG H A++ EL+ WG G + G LG GT SH P+ + P G +
Sbjct: 434 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHCCPQLVPMP-PGQEAQR 490
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP---REVESLSGLRTIAVACGV 451
V CG + ++T GQ G F LG P ++VE + A
Sbjct: 491 VVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLD 550
Query: 452 WHTAAVVEVIVTQSSA-SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
V++ S+A + +SG +T+G + R+ P V L V
Sbjct: 551 QEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR-RVSRA-------PCRVQGLQGIKISTV 602
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
ACG + TV + G VF+ G G+LG + D LP V+ D+ +V ++C
Sbjct: 603 ACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSC 657
Score = 255 (94.8 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 96/317 (30%), Positives = 148/317 (46%)
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT--DVSHWIPKRISGP 386
LE + ++ V CG+ T +T G + T+G G++ G LGHG+ D+S P +
Sbjct: 376 LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN--GCLGHGSLNDISQ--PTIVEAL 431
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G ++ V CG H +++ +LF +G G G LG G R++ P+ V G
Sbjct: 432 L-GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQR 490
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG-----HGDKEPRLKPTCV-P 500
V CG+ ++++ + Q+ A S + G D LG H E + T +
Sbjct: 491 VVCGI--DSSMILTVPGQALAC-GSNRFNKLGL-DPLSLGEEPAPHQQVEEAVTFTPLGS 546
Query: 501 ALIDYN-FHKVACGHSLTVGLTT-SGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGES 558
A +D V G + + +T SG +T GS N + PC V+ L G
Sbjct: 547 APLDQEPLLSVDLGTAHSAAVTXASGDCYTFGS-------NARRVSRAPCRVQG-LQGIK 598
Query: 559 VEEIACG-AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH---VKYI 614
+ +ACG A+ VA+ + EV++WGKGA GRLG D ED P V+ L + H V +
Sbjct: 599 ISTVACGDAFTVAI-GAEGEVFSWGKGARGRLGRKD-EDAGLPRPVQ-LDETHPYTVTSV 655
Query: 615 AC-GSNYSAAICLHKWV 630
+C N A+ +WV
Sbjct: 656 SCCHGNTLLAVRRPEWV 672
Score = 218 (81.8 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 71/266 (26%), Positives = 115/266 (43%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G+ D+ P +E+ + ++ +ACG H ++ + E+F WG GGRLG G +
Sbjct: 417 GSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCC 476
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GL----LGHGTDVSHWIP 380
P L+ V CG + +T+ G+ G N GL LG +
Sbjct: 477 PQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVE 536
Query: 381 KRI------SGPLEGLQVASVTCGPWHTALIT-STGQLFTFGDGTFGVLGHGDRKNVSYP 433
+ + S PL+ + SV G H+A +T ++G +TFG R+ P
Sbjct: 537 EAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA--------RRVSRAP 588
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
V+ L G++ VACG T A+ + G++F+WG G + RLG D++
Sbjct: 589 CRVQGLQGIKISTVACGDAFTVAIG-----------AEGEVFSWGKGARGRLGRKDEDAG 637
Query: 494 L-KPTCVPALIDYNFHKVACGHSLTV 518
L +P + Y V+C H T+
Sbjct: 638 LPRPVQLDETHPYTVTSVSCCHGNTL 663
Score = 151 (58.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 52/186 (27%), Positives = 79/186 (42%)
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
R +E SG+ VACG TA + + G + T+G G LGHG
Sbjct: 374 RFLEGQSGVTIKHVACGDLFTACLTD-----------RGIIMTFGSGSNGCLGHGSLNDI 422
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVED 552
+PT V AL+ Y +VACG S + L+T +F G G+LG + P LV
Sbjct: 423 SQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM 482
Query: 553 KLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK 612
G+ + + CG +LT + G +LG + + PA + +++ V
Sbjct: 483 P-PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEA-VT 540
Query: 613 YIACGS 618
+ GS
Sbjct: 541 FTPLGS 546
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 52/189 (27%), Positives = 87/189 (46%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH---GVGK 321
LGTR P+ + + + CG+ + ++T G+ G +LG +G+
Sbjct: 468 LGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGE 527
Query: 322 DIVQPH--LLESLTMTSVDF----------VTCGEFHTCAVTMA-GELYTWGDGTHNAGL 368
+ PH + E++T T + V G H+ AVT A G+ YT+G
Sbjct: 528 EPA-PHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARR--- 583
Query: 369 LGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK 428
VS P R+ G L+G+++++V CG T I + G++F++G G G LG D +
Sbjct: 584 ------VSR-APCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKD-E 634
Query: 429 NVSYPREVE 437
+ PR V+
Sbjct: 635 DAGLPRPVQ 643
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 291 (107.5 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 89/295 (30%), Positives = 132/295 (44%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R LE + + H+ACG A +T +G + T+G S G LGHG DI QP ++E+L
Sbjct: 378 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 437
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+ V CG H A++ EL+ WG G + G LG GT SH P+ + P G +
Sbjct: 438 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHCCPQLVPMP-PGQEAQR 494
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP---REVESLSGLRTIAVACGV 451
V CG + ++T GQ G F LG P ++VE + A
Sbjct: 495 VVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLD 554
Query: 452 WHTAAVVEVIVTQSSA-SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
V++ S+A + +SG +T+G + R+ P V L V
Sbjct: 555 QEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR-RVSRA-------PCRVQGLQGIKISTV 606
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIAC 564
ACG + TV + G VF+ G G+LG + D LP V+ D+ +V ++C
Sbjct: 607 ACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSC 661
Score = 259 (96.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 82/263 (31%), Positives = 121/263 (46%)
Query: 380 PKRISGPLEG---LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
P+ +S LEG + + V CG TA +T G + TFG G+ G LGHG ++S P V
Sbjct: 373 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIV 432
Query: 437 ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKP 496
E+L G + VACG H A + T+ +LF WG GD RLG G +E P
Sbjct: 433 EALLGYEMVQVACGASHVLA----LSTER-------ELFAWGRGDGGRLGLGTRESHCCP 481
Query: 497 TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPC---LVED 552
VP +V CG ++ LT G GS + +LG +P + G+ P VE+
Sbjct: 482 QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEE 541
Query: 553 KLA----G------ESVEEIACGAYHVAVLTSRN-EVYTWGKGANGRLGHGDVEDRKTPA 601
+ G E + + G H A +T + + YT+G A R+ + P
Sbjct: 542 AVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR-RVS-------RAPC 593
Query: 602 LVEALKDRHVKYIACGSNYSAAI 624
V+ L+ + +ACG ++ AI
Sbjct: 594 RVQGLQGIKISTVACGDAFTVAI 616
Score = 249 (92.7 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 92/302 (30%), Positives = 142/302 (47%)
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT--DVSHWIPKRISGP 386
LE + ++ V CG+ T +T G + T+G G++ G LGHG+ D+S P +
Sbjct: 380 LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN--GCLGHGSLNDISQ--PTIVEAL 435
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L G ++ V CG H +++ +LF +G G G LG G R++ P+ V G
Sbjct: 436 L-GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQR 494
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG-----HGDKEPRLKPTCV-P 500
V CG+ ++++ + Q+ A S + G D LG H E + T +
Sbjct: 495 VVCGI--DSSMILTVPGQALAC-GSNRFNKLGL-DPLSLGEEPAPHQQVEEAVTFTPLGS 550
Query: 501 ALIDYN-FHKVACGHSLTVGLTT-SGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGES 558
A +D V G + + +T SG +T GS N + PC V+ L G
Sbjct: 551 APLDQEPLLSVDLGTAHSAAVTXASGDCYTFGS-------NARRVSRAPCRVQG-LQGIK 602
Query: 559 VEEIACG-AYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH---VKYI 614
+ +ACG A+ VA+ + EV++WGKGA GRLG D ED P V+ L + H V +
Sbjct: 603 ISTVACGDAFTVAI-GAEGEVFSWGKGARGRLGRKD-EDAGLPRPVQ-LDETHPYTVTSV 659
Query: 615 AC 616
+C
Sbjct: 660 SC 661
Score = 218 (81.8 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 71/266 (26%), Positives = 115/266 (43%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
G+ D+ P +E+ + ++ +ACG H ++ + E+F WG GGRLG G +
Sbjct: 421 GSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCC 480
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNA-GL----LGHGTDVSHWIP 380
P L+ V CG + +T+ G+ G N GL LG +
Sbjct: 481 PQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVE 540
Query: 381 KRI------SGPLEGLQVASVTCGPWHTALIT-STGQLFTFGDGTFGVLGHGDRKNVSYP 433
+ + S PL+ + SV G H+A +T ++G +TFG R+ P
Sbjct: 541 EAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA--------RRVSRAP 592
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
V+ L G++ VACG T A+ + G++F+WG G + RLG D++
Sbjct: 593 CRVQGLQGIKISTVACGDAFTVAIG-----------AEGEVFSWGKGARGRLGRKDEDAG 641
Query: 494 L-KPTCVPALIDYNFHKVACGHSLTV 518
L +P + Y V+C H T+
Sbjct: 642 LPRPVQLDETHPYTVTSVSCCHGNTL 667
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 52/189 (27%), Positives = 87/189 (46%)
Query: 265 LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH---GVGK 321
LGTR P+ + + + CG+ + ++T G+ G +LG +G+
Sbjct: 472 LGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGE 531
Query: 322 DIVQPH--LLESLTMTSVDF----------VTCGEFHTCAVTMA-GELYTWGDGTHNAGL 368
+ PH + E++T T + V G H+ AVT A G+ YT+G
Sbjct: 532 EPA-PHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARR--- 587
Query: 369 LGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK 428
VS P R+ G L+G+++++V CG T I + G++F++G G G LG D +
Sbjct: 588 ------VSR-APCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKD-E 638
Query: 429 NVSYPREVE 437
+ PR V+
Sbjct: 639 DAGLPRPVQ 647
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 281 (104.0 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 90/307 (29%), Positives = 140/307 (45%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS-VDFVTCGEFHTCAVTMAGELYTWGDG 362
+F WG S G+LG G +D++ L + + +T G H+ VT G L+ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLN 76
Query: 363 THNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH-TALITSTGQLFTFGDGTFGV 421
LGH +V ++ P + L G + V CG W T ++T GQ+ + G +FG
Sbjct: 77 KDGQLGLGHTEEVLYFTPCK---SLLGCAIQQVACG-WDFTIILTENGQVLSCGSNSFGQ 132
Query: 422 LG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
LG HG R+ V P+ +E L + +++A G+ H A + +SG +F WG
Sbjct: 133 LGVPHGPRRCV-IPQAIELLRE-KVVSIAAGLRHALA-----------ATASGTVFQWGT 179
Query: 480 G---DKNRLGHGDKEPRL----KPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST 532
G RL G P +P+ V L + V G + LT +G ++ GS
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSN 239
Query: 533 VYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGH 591
+GQL + A LP +E + E + + G H+ T +V+TWG+ G+LG
Sbjct: 240 KHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGR 299
Query: 592 GDVEDRK 598
VE R+
Sbjct: 300 -TVETRE 305
Score = 230 (86.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 106/389 (27%), Positives = 172/389 (44%)
Query: 265 LGTRADVLLPRPLESNVVLD-VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
LG + DVL + L + I G H+A+VT +G +F G G+LG G +++
Sbjct: 30 LGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEV 89
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
+ +SL ++ V CG T +T G++ + G +++ G LG V H P+R
Sbjct: 90 LYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCG--SNSFGQLG----VPHG-PRRC 142
Query: 384 SGP--LEGLQ--VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P +E L+ V S+ G H T++G +F +G G L R+ + + +
Sbjct: 143 VIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTG----LASSGRR-LCPGQTLPLF 197
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVS-SGKLFTWGDGDKNRLGHGDKEPRLKPTC 498
+ + G+ ++ AV + + SAS++ +G+L+ WG +L L P
Sbjct: 198 LTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQR 256
Query: 499 VPALIDYNFHKVAC---GHSLTVGLTTSGHVFTMGSTVYGQLG----------NPNADGK 545
+ A N K+A G + V T +G VFT G YGQLG + D
Sbjct: 257 IEARCFQN-EKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPS 315
Query: 546 LPCLVEDK--------LAGESVEEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVED 596
LP K L G + EI+CG+ H +AV+ ++WG +G G G D
Sbjct: 316 LPGSGPQKGTPSCLPCLTGAT--EISCGSEHNLAVIGG--VCHSWGWNEHGMCGDGTEAD 371
Query: 597 RKTPALVEALKDRHVKYIACGSNYSAAIC 625
P V L+ ++ CG+ +S A+C
Sbjct: 372 VWAPKPVPGLRFFLGLHVGCGAGHSLALC 400
Score = 203 (76.5 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 73/257 (28%), Positives = 114/257 (44%)
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAV 457
P + + + LF +G ++G LG G +++V +++ I + G H+A V
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVV 64
Query: 458 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLT 517
+ G LF G +LG G E L T +L+ +VACG T
Sbjct: 65 TD-----------EGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFT 113
Query: 518 VGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED--KLAGESVEEIACGAYHVAVLTSR 575
+ LT +G V + GS +GQLG P+ G C++ +L E V IA G H T+
Sbjct: 114 IILTENGQVLSCGSNSFGQLGVPH--GPRRCVIPQAIELLREKVVSIAAGLRHALAATAS 171
Query: 576 NEVYTWGKG--ANGR-LGHGDVED----RKTPALVEALKDRHVKYIACGSNYSAAIC--- 625
V+ WG G ++GR L G K P+ V L++ + GS++SA++
Sbjct: 172 GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAG 231
Query: 626 -LHKWVSSAE-QLQCSA 640
L+ W S+ QL A
Sbjct: 232 ELYVWGSNKHGQLASQA 248
Score = 189 (71.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 84/287 (29%), Positives = 121/287 (42%)
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
AV A L+ WG ++ LGH DV +++S + + +T G H+A++T
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLS--AQQLSDFCKSGCIKRITGGGGHSAVVTDE 67
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
G LF G G LG G + V Y +SL G VACG W +I+T++
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACG-WDFT----IILTEN--- 119
Query: 469 VSSGKLFTWGDGDKNRLG--HGDKEPRLKPTCV-PALIDYNFHKV---ACGHSLTVGLTT 522
G++ + G +LG HG PR CV P I+ KV A G + T
Sbjct: 120 ---GQVLSCGSNSFGQLGVPHG---PR---RCVIPQAIELLREKVVSIAAGLRHALAATA 170
Query: 523 SGHVFTMGSTVYGQLGNPNADGK-LPCLVEDK----LAGESVEEIAC---GAYHVAVLTS 574
SG VF G T G G+ LP + K + G + C G+ H A LT
Sbjct: 171 SGTVFQWG-TGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTD 229
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
E+Y WG +G+L P +EA ++ K A S ++
Sbjct: 230 AGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWT 275
Score = 143 (55.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 55/240 (22%), Positives = 98/240 (40%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A G V+ WG + + + + + T + LE++ + V G H+A
Sbjct: 170 ASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCV---LAGSDHSAS 226
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS--VDFVTCGEFHTCAVTMAGE 355
+T GE++ WG G+L ++ P +E+ + + V G H A T+ G+
Sbjct: 227 LTDAGELYVWGSNKHGQLASQAAF-LLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGK 285
Query: 356 LYTWGDGTHNAGLLGHGTDVSH-WIPKRI------SGPLEGLQ--------VASVTCGPW 400
++TWG + G LG + W ++ SGP +G ++CG
Sbjct: 286 VFTWGRADY--GQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSE 343
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEV 460
H + G ++G G+ G G +V P+ V L + V CG H+ A+ ++
Sbjct: 344 HNLAVIG-GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALCQL 402
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 278 (102.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 100/355 (28%), Positives = 151/355 (42%)
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS-VDFVTCGEFHTCAVTMAGEL 356
V+ +F WG S G+LG G +D+ P L + VT G H+ VT G+L
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDL 70
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH-TALITSTGQLFTFG 415
+ G LGH +V + I PL G + V CG W T ++T GQ+ + G
Sbjct: 71 FVCGLNKDGQLGLGHTEEVLRFT---ICKPLRGCPIRQVACG-WDFTIMLTEKGQVLSCG 126
Query: 416 DGTFGVLG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
FG LG HG RK V P+ +E L + + VA G+ H A + ++G
Sbjct: 127 SNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALA-----------TTATGS 173
Query: 474 LFTWGDG---DKNRLGHGDKEPRL----KPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
+F WG G RL G P +P+ V L + G + LT +G +
Sbjct: 174 VFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGEL 233
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
+ G +GQL + LP +E E V + G H+ T +V+TWG+
Sbjct: 234 YVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRAD 293
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSSAEQLQCSA 640
G+LG +E + VE +D + + G S LH ++ A ++ C +
Sbjct: 294 YGQLGRR-LEPPEAQKPVE--QDSSLAFQ--GPQNSVPSPLH-CLTGATEISCGS 342
Score = 252 (93.8 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 107/390 (27%), Positives = 173/390 (44%)
Query: 265 LGTRADVLLPRPLESNVVLD-VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
LG + DV LP+ L + + G H+A+VT G++F G G+LG G +++
Sbjct: 30 LGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEV 89
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG--HGTDVSHWIPK 381
++ + + L + V CG T +T G++ + G G LG HG +P+
Sbjct: 90 LRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAF--GQLGVPHGPRKCV-VPQ 146
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSG 441
I E +V V G H T+TG +F +G G L R+ L+
Sbjct: 147 AIECLRE--KVVCVAAGLRHALATTATGSVFQWGTG----LASSGRRLCPGQNLPLFLTA 200
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVS-SGKLFTWGDGDKNRLGHGDKEPRLKPTCVP 500
V G+ ++ AV V + SAS++ +G+L+ WG +N+ HG R +P
Sbjct: 201 KEPSRVT-GLENSTAVCAVAGSDHSASLTDTGELYVWG---RNK--HGQLASRAVFLPLP 254
Query: 501 ALIDYNF---HKVAC---GHSLTVGLTTSGHVFTMGSTVYGQLGN--PNADGKLPCLVED 552
I+ ++ KV G + V T +G VFT G YGQLG + + P +
Sbjct: 255 QRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDS 314
Query: 553 KLAGESVE--------------EIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDR 597
LA + + EI+CG+ H +AV+ R++ +WG +G G G +
Sbjct: 315 SLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVI--RDKCCSWGWNEHGMCGDGTESNV 372
Query: 598 KTPALVEAL--KDRHVKYIACGSNYSAAIC 625
TP V+AL + + CG+ +S A+C
Sbjct: 373 WTPTPVQALPPSPSRLLLVGCGAGHSLAVC 402
Score = 186 (70.5 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 85/295 (28%), Positives = 125/295 (42%)
Query: 347 TCA---VTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
+CA V+ A L+ WG ++ LGH DV ++P+++S + + SVT G H+A
Sbjct: 5 SCASETVSAAAVLFAWGANSYGQLGLGHKEDV--FLPQQLSDFCQAGCIKSVTGGGGHSA 62
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
++T G LF G G LG G + V + L G VACG W +++T
Sbjct: 63 VVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACG-WDFT----IMLT 117
Query: 464 QSSASVSSGKLFTWGDGDKNRLG--HGDKEPRLKPTCVPALIDYNFHKVAC---GHSLTV 518
+ G++ + G +LG HG PR VP I+ KV C G +
Sbjct: 118 EK------GQVLSCGSNAFGQLGVPHG---PR--KCVVPQAIECLREKVVCVAAGLRHAL 166
Query: 519 GLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDK----LAGESVEEIAC---GAYHVA 570
T +G VF G T G G+ LP + K + G C G+ H A
Sbjct: 167 ATTATGSVFQWG-TGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSA 225
Query: 571 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEA--LKDRHVKYIACGSNYSAA 623
LT E+Y WG+ +G+L V P +EA +D V + G + A
Sbjct: 226 SLTDTGELYVWGRNKHGQLASRAVF-LPLPQRIEAHYFQDEKVTAVWSGWTHLVA 279
Score = 143 (55.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 62/244 (25%), Positives = 105/244 (43%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A G V+ WG + + + +N+ T + LE++ V +A G H+A
Sbjct: 170 ATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTA--VCAVA-GSDHSAS 226
Query: 298 VTRQGEVFTWGEESGGRLG-HGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMA 353
+T GE++ WG G+L V + ++ H + +T+V G H A T
Sbjct: 227 LTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAV---WSGWTHLVAKTET 283
Query: 354 GELYTWGDGTHNAGLLGH-------------GTDVSHWIPKR-ISGPLEGLQVAS-VTCG 398
G+++TWG + G LG + ++ P+ + PL L A+ ++CG
Sbjct: 284 GKVFTWGRADY--GQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCG 341
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL--SGLRTIAVACGVWHTAA 456
H L + ++G G+ G G NV P V++L S R + V CG H+ A
Sbjct: 342 SEHN-LAVIRDKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLA 400
Query: 457 VVEV 460
V ++
Sbjct: 401 VCQL 404
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 282 (104.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 90/319 (28%), Positives = 142/319 (44%)
Query: 288 IACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ G H A+VT + E++TW G + G+LGHG QP +E L ++ V+C
Sbjct: 372 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 431
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLG----HGTDVSHWIPKRISGPLEGLQVASVTCG 398
G+ T VT G+LY +G + G +G G +V P +++ L V V+CG
Sbjct: 432 GDDFTVCVTDEGQLYAFGSDYY--GCMGVDKVSGPEVLE--PMQLNFFLSN-PVEQVSCG 486
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
H ++T +++++G G +G LG ++ P+ V+ L +AV CG T
Sbjct: 487 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGT---- 542
Query: 459 EVIVTQSSASVSSG--KLFTWG-----DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
++TQS ++ G + G G N + + T L Y +A
Sbjct: 543 -FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 601
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVA 570
G + T + G + T G GQLG N +L L+ L G+ V ++CG
Sbjct: 602 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTI 661
Query: 571 VLTSRNEVYTWGKGANGRL 589
T N ++ WG G NGRL
Sbjct: 662 AATDDNHIFAWGNGGNGRL 680
Score = 258 (95.9 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 98/349 (28%), Positives = 146/349 (41%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM-TSVDFVTCGEFHTCAVTMA 353
A + +R EV+ WG GG+ P L+ + S V G H VT+
Sbjct: 338 AVVTSRTSEVYVWG---GGKS---------TPQKLDVIKSGCSARQVCAGNTHFAVVTVE 385
Query: 354 GELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQ 410
ELYTW + GT G LGHG S+ PK + L+G + V+CG T +T GQ
Sbjct: 386 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVE-KLQGKAIHQVSCGDDFTVCVTDEGQ 444
Query: 411 LFTFGDGTFGVLGHG--DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
L+ FG +G +G V P ++ V+CG H V++T++
Sbjct: 445 LYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV-----VVLTRNK-- 497
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFT 528
++++WG G+ RLG +E P V V CG T LT SG V
Sbjct: 498 ----EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLA 553
Query: 529 MGSTVYGQLG---------NPNADGKLPCLVEDKLAGE----SVEEIACGAYHVAVLTSR 575
G + +LG N A ++P LA + + IA G H A + R
Sbjct: 554 CGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDER 613
Query: 576 NEVYTWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGSNYSAA 623
+ T+G G+LG G+ + R L+ L + V ++CG ++ A
Sbjct: 614 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 662
Score = 248 (92.4 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 83/332 (25%), Positives = 147/332 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--GKDI 323
G +A P+ +E +H ++CG VT +G+++ +G + G +G G ++
Sbjct: 407 GDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEV 466
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
++P L V+ V+CG+ H +T E+Y+WG G + G LG ++ ++ P+R+
Sbjct: 467 LEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTPQRV 524
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF----------GVLGHGDRKNVSYP 433
P + L + +V CG T L+T +G++ G F G++ H V Y
Sbjct: 525 DVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYT 583
Query: 434 RE---VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
+ LS + +A G HTAA+ E G+L T+G +LG G+
Sbjct: 584 TSFTLAKQLSFYKIRTIAPGKTHTAAIDE-----------RGRLLTFGCNKCGQLGVGNY 632
Query: 491 EPRLKPTCVPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNA--DGKL 546
+ RL + L +V+CG T+ T H+F G+ G+L P G
Sbjct: 633 KKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSD 692
Query: 547 PCLVEDK-LAGE--SVEEIACGAYHVAVLTSR 575
C + + G V +++C +H ++ +
Sbjct: 693 ICTSWPRPIFGSLHHVPDLSCRGWHTILIVEK 724
Score = 233 (87.1 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 76/244 (31%), Positives = 114/244 (46%)
Query: 383 ISGPLEGLQVASVTCGPWHTALITS-TGQLFTFGDGTFGVLGHGDRKNVSYPREVESL-S 440
++ P + + ++VT P A++TS T +++ +G G S P++++ + S
Sbjct: 320 LNAPTKRPRSSTVTEAP--IAVVTSRTSEVYVWGGGK------------STPQKLDVIKS 365
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD---GDK--NRLGHGDKEPRLK 495
G V G H A +VT +L+TW + G K +LGHGDK +
Sbjct: 366 GCSARQVCAGNTHFA-----VVTVEK------ELYTWVNMQGGTKLHGQLGHGDKASYRQ 414
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK--LPCLVEDK 553
P V L H+V+CG TV +T G ++ GS YG +G G L + +
Sbjct: 415 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 474
Query: 554 LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
VE+++CG HV VLT EVY+WG G GRLG ED TP V+ K +
Sbjct: 475 FLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVA 534
Query: 614 IACG 617
+ CG
Sbjct: 535 VQCG 538
Score = 149 (57.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 47/154 (30%), Positives = 70/154 (45%)
Query: 328 LLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
L + L+ + + G+ HT A+ G L T+G + G LG G + GPL
Sbjct: 588 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPL 645
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-------HGDRKNVSYPREVESLS 440
G QV V+CG T T +F +G+G G L HG S+PR +
Sbjct: 646 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI--FG 703
Query: 441 GLRTIA-VACGVWHTAAVVE-VIVTQSSASVSSG 472
L + ++C WHT +VE V+ +++ S SSG
Sbjct: 704 SLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSG 737
Score = 137 (53.3 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 55/196 (28%), Positives = 82/196 (41%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGT-RADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
+VY WG C + G D +Y R DV P+ L +++ V CG L+T
Sbjct: 498 EVYSWG---CGEYGRLGLDSEEDYYTPQRVDV--PKAL---IIVAVQ---CGCDGTFLLT 546
Query: 300 RQGEVFTWGEESGGRLG-HGVGKDIVQ-------PH-----LLESLTMTSVDFVTCGEFH 346
+ G+V G +LG + I+ P+ L + L+ + + G+ H
Sbjct: 547 QSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 606
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
T A+ G L T+G + G LG G + GPL G QV V+CG T T
Sbjct: 607 TAAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAAT 664
Query: 407 STGQLFTFGDGTFGVL 422
+F +G+G G L
Sbjct: 665 DDNHIFAWGNGGNGRL 680
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 280 (103.6 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 90/319 (28%), Positives = 143/319 (44%)
Query: 288 IACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ G H A+VT + E++TW G + G+LGHG QP +E L ++ V+C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLG----HGTDVSHWIPKRISGPLEGLQVASVTCG 398
G+ T VT G+LY +G + G +G G +V P +++ L V V+CG
Sbjct: 434 GDDFTVCVTDEGQLYAFGSDYY--GCMGVDKVAGPEVLE--PMQLNFFLNN-PVEQVSCG 488
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
H ++T +++++G G +G LG ++ P++V+ L +AV CG T
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT---- 544
Query: 459 EVIVTQSSASVSSG--KLFTWG-----DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
++TQS ++ G + G G N + + T L Y +A
Sbjct: 545 -FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIA 603
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVA 570
G + T + G + T G GQLG N +L L+ L G+ V ++CG
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTI 663
Query: 571 VLTSRNEVYTWGKGANGRL 589
T N ++ WG G NGRL
Sbjct: 664 AATDDNHIFAWGNGGNGRL 682
Score = 260 (96.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 99/350 (28%), Positives = 148/350 (42%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM-TSVDFVTCGEFHTCAVTMA 353
A + +R EV+ WG GG+ P L+ + S V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGKS---------TPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 354 GELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQ 410
ELYTW + GT G LGHG S+ PK + L+G + V+CG T +T GQ
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDEGQ 446
Query: 411 LFTFGDGTFGVLGHGDR---KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
L+ FG +G +G D+ V P ++ V+CG H V++T++
Sbjct: 447 LYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHV-----VVLTRNK- 499
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
++++WG G+ RLG +E P V V CG T LT SG V
Sbjct: 500 -----EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVL 554
Query: 528 TMGSTVYGQLG---------NPNADGKLPCLVEDKLAGE----SVEEIACGAYHVAVLTS 574
G + +LG N A ++P LA + + IA G H A +
Sbjct: 555 ACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE 614
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGSNYSAA 623
R + T+G G+LG G+ + R L+ L + V ++CG ++ A
Sbjct: 615 RGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 237 (88.5 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 80/332 (24%), Positives = 146/332 (43%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VGKDI 323
G +A P+ +E + ++CG VT +G+++ +G + G +G G ++
Sbjct: 409 GDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEV 468
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
++P L V+ V+CG+ H +T E+Y+WG G + G LG ++ ++ P+++
Sbjct: 469 LEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTPQKV 526
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF----------GVLGHGDRKNVSYP 433
P + L + +V CG T L+T +G++ G F G++ H + Y
Sbjct: 527 DVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYT 585
Query: 434 RE---VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
+ LS + +A G HTAA+ E G+L T+G +LG G+
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAIDE-----------RGRLLTFGCNKCGQLGVGNY 634
Query: 491 EPRLKPTCVPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNA--DGKL 546
+ RL + L +V+CG T+ T H+F G+ G+L P G
Sbjct: 635 KKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSD 694
Query: 547 PCLVEDK-LAGE--SVEEIACGAYHVAVLTSR 575
C + + G V +++C +H ++ +
Sbjct: 695 ICTSWPRPIFGSLHHVPDLSCRGWHTILIVEK 726
Score = 223 (83.6 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 75/244 (30%), Positives = 113/244 (46%)
Query: 383 ISGPLEGLQVASVTCGPWHTALITS-TGQLFTFGDGTFGVLGHGDRKNVSYPREVESL-S 440
++ P + + ++VT P A++TS T +++ +G G S P++++ + S
Sbjct: 322 LNAPTKRPRSSTVTEAP--IAVVTSRTSEVYVWGGGK------------STPQKLDVIKS 367
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD---GDK--NRLGHGDKEPRLK 495
G V G H A +VT +L+TW + G K +LGHGDK +
Sbjct: 368 GCSARQVCAGNTHFA-----VVTVEK------ELYTWVNMQGGTKLHGQLGHGDKASYRQ 416
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK--LPCLVEDK 553
P V L +V+CG TV +T G ++ GS YG +G G L + +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 554 LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
VE+++CG HV VLT EVY+WG G GRLG ED TP V+ K +
Sbjct: 477 FLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVA 536
Query: 614 IACG 617
+ CG
Sbjct: 537 VQCG 540
Score = 148 (57.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 44/155 (28%), Positives = 67/155 (43%)
Query: 328 LLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
L + L+ + + G+ HT A+ G L T+G + G LG G + GPL
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPL 647
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-------HGDRKNVSYPREVESLS 440
G QV V+CG T T +F +G+G G L HG S+PR +
Sbjct: 648 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI--FG 705
Query: 441 GLRTIA-VACGVWHTAAVVEVIVTQSSASVSSGKL 474
L + ++C WHT +VE ++ + +S L
Sbjct: 706 SLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSSL 740
Score = 138 (53.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 54/195 (27%), Positives = 82/195 (42%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
+VY WG C + G D +Y T V +P+ L +++ V CG L+T+
Sbjct: 500 EVYSWG---CGEYGRLGLDSEEDYY-TPQKVDVPKAL---IIVAVQ---CGCDGTFLLTQ 549
Query: 301 QGEVFTWGEESGGRLG-HGVGKDIVQ-------PH-----LLESLTMTSVDFVTCGEFHT 347
G+V G +LG + I+ P+ L + L+ + + G+ HT
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHT 609
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
A+ G L T+G + G LG G + GPL G QV V+CG T T
Sbjct: 610 AAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667
Query: 408 TGQLFTFGDGTFGVL 422
+F +G+G G L
Sbjct: 668 DNHIFAWGNGGNGRL 682
Score = 127 (49.8 bits), Expect = 0.00054, P = 0.00054
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 555 AGESVEEIACGAYHVAVLTSRNEVYTW-----GKGANGRLGHGDVEDRKTPALVEALKDR 609
+G S ++ G H AV+T E+YTW G +G+LGHGD + P VE L+ +
Sbjct: 367 SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK 426
Query: 610 HVKYIACGSNYSAAI 624
++ ++CG +++ +
Sbjct: 427 AIRQVSCGDDFTVCV 441
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 279 (103.3 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 84/312 (26%), Positives = 140/312 (44%)
Query: 288 IACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ G H A+VT + E++TW G + G+LGHG QP +E L ++ V+C
Sbjct: 384 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSC 443
Query: 343 GEFHTCAVTMAGELYTWGDGTHNA-GL-LGHGTDVSHWIPKRISGPLEGLQVASVTCGPW 400
G+ T +T G+LY +G + G+ +G++V P ++ L V V+CG
Sbjct: 444 GDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLE--PLQLDFFLTN-PVEQVSCGDN 500
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEV 460
H A++T +++T+G G +G LG ++ P++V+ L ++V CG T + +
Sbjct: 501 HVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQT 560
Query: 461 --IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTV 518
++ + L G N + + T L Y ++ G + T
Sbjct: 561 GKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTA 620
Query: 519 GLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVAVLTSRNE 577
+ G + T GS GQLG + L L+ L G+ V ++CG T N
Sbjct: 621 SIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDNH 680
Query: 578 VYTWGKGANGRL 589
++ WG G NGRL
Sbjct: 681 IFAWGNGGNGRL 692
Score = 268 (99.4 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 81/323 (25%), Positives = 148/323 (45%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG--HGVGKDI 323
G RA P+ +E + ++CG +T +G+++ +G + G +G G ++
Sbjct: 419 GDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEV 478
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
++P L+ V+ V+CG+ H +T E+YTWG G + G LG ++ H+ P+++
Sbjct: 479 LEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY--GRLGLDSEEDHYTPQKV 536
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN--VSYPR--EVESL 439
P + L + SV CG T L+T TG++ G F LG + +++ EV
Sbjct: 537 DVP-KTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYA 595
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 499
+ L T+A ++ + T +++ G+L T+G +LG GD + L +
Sbjct: 596 TSL-TLAKQLS-FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLL 653
Query: 500 PA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPN--ADGKLPCLVEDK-L 554
L +V+CG T+ T H+F G+ G+L P A G C + +
Sbjct: 654 AGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPI 713
Query: 555 AGE--SVEEIACGAYHVAVLTSR 575
G V +++C +H ++ +
Sbjct: 714 FGSLHHVPDLSCRGWHTIIVVEK 736
Score = 260 (96.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 94/326 (28%), Positives = 139/326 (42%)
Query: 318 GVGKDIVQPHLLESLTM-TSVDFVTCGEFHTCAVTMAGELYTWGD---GTHNAGLLGHGT 373
G GK P L+++ S V G H VT+ ELYTW + GT G LGHG
Sbjct: 363 GGGKST--PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGD 420
Query: 374 DVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--KNVS 431
S+ PK + L+G + V+CG T IT GQL+ FG +G +G V
Sbjct: 421 RASYRQPKHVE-KLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVL 479
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
P +++ V+CG H A ++T++ +++TWG G+ RLG +E
Sbjct: 480 EPLQLDFFLTNPVEQVSCGDNHVA-----VLTRNR------EVYTWGCGEYGRLGLDSEE 528
Query: 492 PRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADG------ 544
P V N V CG T LT +G V G + +LG N G
Sbjct: 529 DHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDT 588
Query: 545 --KLPCLVEDKLAGE----SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRK 598
++P LA + + I+ G H A + R + T+G G+LG GD +
Sbjct: 589 YCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHL 648
Query: 599 TPALVEA-LKDRHVKYIACGSNYSAA 623
L+ L + V ++CG ++ A
Sbjct: 649 GINLLAGPLGGKQVIRVSCGDEFTIA 674
Score = 246 (91.7 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 79/244 (32%), Positives = 117/244 (47%)
Query: 383 ISGPLEGLQVASVTCGPWHTALITS-TGQLFTFGDGTFGVLGHGDRKNVSYPREVESL-S 440
++GP + + ++V P A++TS T +++ +G G S P++++++ S
Sbjct: 332 LNGPNKRPRSSTVNEAP--IAVVTSRTSEVYVWGGGK------------STPQKLDAIKS 377
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD---GDK--NRLGHGDKEPRLK 495
G V G H A +VT +L+TW + G K +LGHGD+ +
Sbjct: 378 GCSARQVCAGNTHFA-----VVTVEK------ELYTWVNMQGGTKLHGQLGHGDRASYRQ 426
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK--LPCLVEDK 553
P V L +V+CG TV +T G ++ GS YG +G A G L L D
Sbjct: 427 PKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDF 486
Query: 554 LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
VE+++CG HVAVLT EVYTWG G GRLG ED TP V+ K ++
Sbjct: 487 FLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVS 546
Query: 614 IACG 617
+ CG
Sbjct: 547 VHCG 550
Score = 161 (61.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 71/252 (28%), Positives = 109/252 (43%)
Query: 241 DVYIWGEVICDNVVKAGADKNVN-YLGTRADVLLPRPLESNVVLDVHHIACG---VRHAA 296
+VY WG C + G D + Y + DV P+ L N+V VH G +
Sbjct: 510 EVYTWG---CGEYGRLGLDSEEDHYTPQKVDV--PKTL--NIV-SVHCGCDGTFLLTQTG 561
Query: 297 LVTRQG--EVFTWG--EESGGRLGHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCA 349
V G E G + + G + H ++ L + L+ + ++ G+ HT +
Sbjct: 562 KVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTAS 621
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTG 409
+ G L T+G ++ G LG G H ++GPL G QV V+CG T T
Sbjct: 622 IDERGRLLTFG--SNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDN 679
Query: 410 QLFTFGDGTFGVLG-------HGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAVVE-V 460
+F +G+G G L HG S+PR + L + ++C WHT VVE V
Sbjct: 680 HIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPI--FGSLHHVPDLSCRGWHTIIVVEKV 737
Query: 461 IVTQSSASVSSG 472
+ +++ S SSG
Sbjct: 738 LNSKTIRSNSSG 749
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 269 (99.8 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 102/372 (27%), Positives = 163/372 (43%)
Query: 266 GTRADVLLPRPLESNVVLD-VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV 324
G D PR +ES + + + + G H+AL++ GE+ G+ G+LG G +I+
Sbjct: 53 GNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKGQLGLGHTLEIM 112
Query: 325 QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI-PKRI 383
V V+CG T +T G+ G++ G LG + +H P +
Sbjct: 113 TFQTCPLPGFGRVQQVSCGWDFTIILT--GDGLVLACGSNAFGQLGVSAEKTHSAEPLLL 170
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR 443
E V SV G H T++G ++ +G G + H K + P+ V S +
Sbjct: 171 KSFHE--PVTSVAAGLRHALASTASGCVYQWGTG---LSSHA--KRMLNPQPVPSHLSSK 223
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVS-SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
+ G H + + A ++ +G+LF WG +L G L ++
Sbjct: 224 EPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLPVALDRSM 283
Query: 503 I-DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPC---LVEDKLAGE 557
+ D V G + V T SG VFT G + YGQLG N K C LV + +
Sbjct: 284 LQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVK 343
Query: 558 SV---EEIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
++ +I+CG+ H +AV+ R V++WG +G G G ++D P + AL D
Sbjct: 344 ALFGATQISCGSEHNLAVVGGR--VFSWGWNEHGMCGDGSLQDITQPQPIPALADAVALL 401
Query: 614 IACGSNYSAAIC 625
I CG+ +S A+C
Sbjct: 402 IGCGAGHSMALC 413
Score = 268 (99.4 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 98/343 (28%), Positives = 156/343 (45%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLES-LTMTSVDFVTCGEFHTCAVTMAGELYTWGDG 362
++TWG S G+LG G +D +P +ES L + VT G H+ ++ +GEL G
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQN 98
Query: 363 THNAGL-LGHGTDVSHWIPKRISGPLEGL-QVASVTCGPWH-TALITSTGQLFTFGDGTF 419
H L LGH ++ + + PL G +V V+CG W T ++T G + G F
Sbjct: 99 -HKGQLGLGHTLEIMTFQ----TCPLPGFGRVQQVSCG-WDFTIILTGDGLVLACGSNAF 152
Query: 420 GVLG-HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G LG ++ + + P ++S T +VA G+ H A S +SG ++ WG
Sbjct: 153 GQLGVSAEKTHSAEPLLLKSFHEPVT-SVAAGLRHALA-----------STASGCVYQWG 200
Query: 479 DG---DKNRLGHGDKEPR----LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G R+ + P +P VP KV G + LT +G +F GS
Sbjct: 201 TGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGS 260
Query: 532 TVYGQLGNPNADGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQL + + LP ++ L E V ++ G H+ T V+TWG+ G+LG
Sbjct: 261 NKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLG 320
Query: 591 HGD--VEDR-------KTPALVEALKDRHVKYIACGSNYSAAI 624
+ +E + ++P V+AL I+CGS ++ A+
Sbjct: 321 QTNHSMEKQSCDEHLVRSPVEVKALFG--ATQISCGSEHNLAV 361
Score = 185 (70.2 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 58/237 (24%), Positives = 107/237 (45%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNV-NYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
A G VY WG + + + + V ++L ++ L+P ++V + G H A
Sbjct: 192 ASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPG--FAHVT--TQKVIAGSAHCA 247
Query: 297 LVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS--VDFVTCGEFHTCAVTMAG 354
+T GE+F WG G+L G + P L+ + V V G H A T +G
Sbjct: 248 CLTVNGELFLWGSNKHGQLISG-SLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESG 306
Query: 355 ELYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLE--GLQVAS-VTCGPWHTALITSTGQ 410
++TWG + G H + + P+E L A+ ++CG H + G+
Sbjct: 307 RVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVVG-GR 365
Query: 411 LFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
+F++G G+ G G ++++ P+ + +L+ + + CG H+ A+ + ++ SA
Sbjct: 366 VFSWGWNEHGMCGDGSLQDITQPQPIPALADAVALLIGCGAGHSMALCSLKSSEDSA 422
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 265 (98.3 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 69/249 (27%), Positives = 123/249 (49%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDG 362
+V++WG + G+LG +D + P LL ++ S+ + CG H A+T G+++TWG G
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 363 THNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVL 422
+ +G LGHG ++ +PK +S + + G H+ ++ +G +FT G+G+FG L
Sbjct: 76 S--SGQLGHGDILNITLPKLVSF-FDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL 132
Query: 423 GHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDK 482
GHGD ++S P +V + VACG+ H+ + + ++ +G G +
Sbjct: 133 GHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLF-----------AGNQVCGFGSGKR 181
Query: 483 NRLGHG-DKEPRLKPTCVPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP 540
+LG D+ + CV + L D +++ + ++ G F+ G G G P
Sbjct: 182 GQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGR---GFCGGP 238
Query: 541 N--ADGKLP 547
+ A LP
Sbjct: 239 DVHAPQSLP 247
Score = 259 (96.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 86/272 (31%), Positives = 128/272 (47%)
Query: 362 GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV 421
G + G LGHG +S P ++S V V CG H+ ++ + Q+ FG G G
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSH-FNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQ 183
Query: 422 LGHG-DR-KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
LG DR K+V+ P V L + + ++ H+AA+ SA G+ F+WG
Sbjct: 184 LGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAI--------SAD---GQFFSWGR 232
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN 539
G G D P +P+ + +F +VA G + + LT G VF +GST+ Q
Sbjct: 233 GF---CGGPDVHA---PQSLPSPL--SFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEK 284
Query: 540 PNAD-GKLPCLVED--KLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
L E G V +IA GA H A +T EV TWG G +G+LG G+ D
Sbjct: 285 QQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTND 344
Query: 597 RKTPALVEA----LKDRHVKYIACGSNYSAAI 624
+ +P LV L+ + +K + CGS ++ A+
Sbjct: 345 QTSPELVSLGSIDLRTKEIK-VYCGSGFTYAV 375
Score = 250 (93.1 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 75/229 (32%), Positives = 111/229 (48%)
Query: 256 AGADKNVNYLGTRA--DVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGG 313
AG D LGT D LLP+ L + + +ACG H +T G+VFTWG S G
Sbjct: 22 AGTD---GQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSG 78
Query: 314 RLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
+LGHG +I P L+ + + G H+ V+ +G ++T G+G+ G LGHG
Sbjct: 79 QLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSF--GQLGHGD 136
Query: 374 DVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG-DR-KNVS 431
+S P ++S V V CG H+ ++ + Q+ FG G G LG DR K+V+
Sbjct: 137 TLSLSTPAKVSH-FNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVN 195
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
P V L + + ++ H+AA+ SA G+ F+WG G
Sbjct: 196 LPCVVSGLKDVEVVRISANGDHSAAI--------SAD---GQFFSWGRG 233
Score = 242 (90.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 73/219 (33%), Positives = 110/219 (50%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV-ACGVWHTAAVVEVIVTQSSAS 468
Q++++G GT G LG ++ P ++ SL+ L +I++ ACG H A+
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALT---------- 64
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFT 528
S GK+FTWG G +LGHGD P V D + A G S + ++ SG +FT
Sbjct: 65 -SGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFT 123
Query: 529 MGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANG 587
G+ +GQLG+ + P V +SV+ +ACG H VL + N+V +G G G
Sbjct: 124 CGNGSFGQLGHGDTLSLSTPAKVSH-FNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRG 182
Query: 588 RLGHGD--VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+LG ++ P +V LKD V I+ ++SAAI
Sbjct: 183 QLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAI 221
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 218 (81.8 bits), Expect = 3.3e-20, Sum P(4) = 3.3e-20
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
IACG H +++ G++ WG G+ G G I H ++ +++ + CG+FH+
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG-DWPAIEKIACGQFHS 839
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHG--TDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
+ G L+T+G G G LGHG + + +P R++G + +V + CG HT ++
Sbjct: 840 AFICSDGSLWTFGWGVW--GQLGHGGRNNSNQLVPTRVNGLI--CKVTQIACGRAHTVVL 895
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
T TG++ G G++G +G D + L LR +A +H+ + E
Sbjct: 896 TDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITE 949
Score = 217 (81.4 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 64/207 (30%), Positives = 99/207 (47%)
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
+P+ + P G + ++ CG H +++S+GQL +G FG G G ++ +V+
Sbjct: 767 LPRVLEYP--GGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG 824
Query: 439 LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP--RLKP 496
+ACG +H+A + S G L+T+G G +LGHG + +L P
Sbjct: 825 -DWPAIEKIACGQFHSAFIC-----------SDGSLWTFGWGVWGQLGHGGRNNSNQLVP 872
Query: 497 TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAG 556
T V LI ++ACG + TV LT +G V GS YGQ+G + K+ L
Sbjct: 873 TRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGP 931
Query: 557 ESVEEIACGAYHVAVLTSRNEVYTWGK 583
V +IA YH +T N V+ WG+
Sbjct: 932 LRVRDIATHYYHSICITEDNRVFEWGR 958
Score = 150 (57.9 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 61/202 (30%), Positives = 93/202 (46%)
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNR--LGHGDK 490
PR +E G R A+ACG H ++V SS G+L WG + +GH +
Sbjct: 768 PRVLEYPGG-RPRAIACGAEH------ILVLSSS-----GQLSAWGGNRFGQCGVGHSFR 815
Query: 491 EPRLKPTCV--PALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP---NADGK 545
L PA+ K+ACG + + + G ++T G V+GQLG+ N++
Sbjct: 816 IANLHQVDGDWPAI-----EKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQL 870
Query: 546 LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEA 605
+P V + V +IACG H VLT V G G+ G++G D + +K A
Sbjct: 871 VPTRVNGLIC--KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDD-DIKKVFAFTPL 927
Query: 606 -LKDRHVKYIACGSNYSAAICL 626
L V+ IA ++Y +IC+
Sbjct: 928 PLGPLRVRDIA--THYYHSICI 947
Score = 139 (54.0 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 36/100 (36%), Positives = 50/100 (50%)
Query: 387 LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA 446
L+G + SV CG H+ALITS G L+T+G G LGHG++ P +V +G + +
Sbjct: 1020 LDG-NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVN 1078
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
V+ G HT A S G +F WG D + G
Sbjct: 1079 VSLGNNHTIA-----------STDDGSVFAWGKNDFGQCG 1107
Score = 137 (53.3 bits), Expect = 3.3e-20, Sum P(4) = 3.3e-20
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
REV+ ++VACG+ H+A ++T S G L+TWG G +LGHG+K R
Sbjct: 1014 REVKHFLDGNIVSVACGLSHSA-----LIT------SEGTLYTWGKGLDYQLGHGNKNER 1062
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG 538
++P V + V+ G++ T+ T G VF G +GQ G
Sbjct: 1063 MEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 137 (53.3 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ--PHLLESLTMTSVDFVTC 342
+ IACG H+A + G ++T+G G+LGHG + Q P + L + V + C
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGL-ICKVTQIAC 887
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
G HT +T G + G G++ G +G D+ + PL L+V + +H+
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGSY--GQMGVDDDIKK-VFAFTPLPLGPLRVRDIATHYYHS 944
Query: 403 ALITSTGQLFTFG 415
IT ++F +G
Sbjct: 945 ICITEDNRVFEWG 957
Score = 121 (47.7 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 558 SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACG 617
++ +ACG H A++TS +YTWGKG + +LGHG+ +R P V ++ G
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLG 1082
Query: 618 SNYSAA 623
+N++ A
Sbjct: 1083 NNHTIA 1088
Score = 102 (41.0 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 499 VPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGE 557
V +D N VACG S + +T+ G ++T G + QLG+ N + ++ P V + +
Sbjct: 1016 VKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAK 1075
Query: 558 SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
V ++ G H T V+ WGK G+ G
Sbjct: 1076 WVN-VSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 83 (34.3 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 24/91 (26%), Positives = 41/91 (45%)
Query: 272 LLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLES 331
L+P + + ++ V IACG H ++T G V G S G++G V DI +
Sbjct: 870 LVPTRV-NGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMG--VDDDIKKVFAFTP 926
Query: 332 LTM--TSVDFVTCGEFHTCAVTMAGELYTWG 360
L + V + +H+ +T ++ WG
Sbjct: 927 LPLGPLRVRDIATHYYHSICITEDNRVFEWG 957
Score = 40 (19.1 bits), Expect = 3.3e-20, Sum P(4) = 3.3e-20
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 145 DSRDLTSNSASDSSVS 160
+SR ++NS+SD+S S
Sbjct: 8 NSRKTSANSSSDTSTS 23
Score = 39 (18.8 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 603 VEALKDRHVKYIACGSNYSAAI 624
V+ D ++ +ACG ++SA I
Sbjct: 1016 VKHFLDGNIVSVACGLSHSALI 1037
Score = 37 (18.1 bits), Expect = 3.3e-20, Sum P(4) = 3.3e-20
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 610 HVKYIACGSNYSAAICLHKW 629
H + A GS + CL +W
Sbjct: 1361 HAEPAAVGSPPECSTCLDEW 1380
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 181 (68.8 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 52/181 (28%), Positives = 90/181 (49%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A GV+H L+T GEV+++G + P L +L V V G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPWRSEPAELCPS--SPILENALVGQYVVTVATGSFHSG 104
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS----GPLEGLQVASVTCGPWHTAL 404
AVT +G +Y WG+ + + + V P IS PL +++ + CG HT
Sbjct: 105 AVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLA 164
Query: 405 ITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
++ + +++ +G G G++ V+ P++VE L+G + VACG +H+ A+V+ + +
Sbjct: 165 LSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPS 222
Query: 464 Q 464
Q
Sbjct: 223 Q 223
Score = 156 (60.0 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 53/162 (32%), Positives = 77/162 (47%)
Query: 473 KLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN-FHKVACG-HSLTVGLTTSGHVFTMG 530
+++TWG G +LGHGD PRL+P CV L H A G HSL LT V++ G
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLA--LTAKSQVYSWG 578
Query: 531 STVYGQLGNPNADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
S +GQLG+ + +P L K+ E+ V +A G + L E + G +GR
Sbjct: 579 SNTFGQLGHSDFPTTVPRLA--KMNSENGVWSVAAGQDYSLFLVD-TEDFQPGLYYSGRQ 635
Query: 590 G--HGD--VEDR---KTPALVEALKDRHVKYIACGSNYSAAI 624
GD E+ KTP L+ K ++ + G + A+
Sbjct: 636 DPTEGDNLPENHSGTKTPVLLSCSKLGYISRVTAGKDSCLAL 677
Score = 138 (53.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 269 ADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQP 326
A++ P+ N ++ V +A G H+ VT G V+ WGE S G+ + + +P
Sbjct: 75 AELCPSSPILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEP 134
Query: 327 HLL-----ESLTMTSVDFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI 379
+ + E+ + +V + CGE HT A++++ E++ WG G GL+ V+
Sbjct: 135 NPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTTFPVTK-- 191
Query: 380 PKRISGPLEGLQVASVTCGPWHT-ALI 405
P+++ L G V V CG +H+ AL+
Sbjct: 192 PQKVEH-LAGRVVLQVACGAFHSLALV 217
Score = 138 (53.6 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 36/114 (31%), Positives = 57/114 (50%)
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
GE ++ E++TWG G G LGHG + P + L+G +V + G +H+
Sbjct: 509 GEADALLPSLRTEVWTWGKGKD--GQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHS 565
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA 456
+T+ Q++++G TFG LGH D +P V L+ + + GVW AA
Sbjct: 566 LALTAKSQVYSWGSNTFGQLGHSD-----FPTTVPRLAKMNS---ENGVWSVAA 611
Score = 132 (51.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 52/200 (26%), Positives = 82/200 (41%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P+R+ G G V G H L+T G++++FG T S P +L
Sbjct: 32 PERLPG-WTGKTVLQAALGVKHGVLLTEDGEVYSFG--TLPWRSEPAELCPSSPILENAL 88
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE--PRLKPT 497
G + VA G +H+ AV E SG ++ WG+ + +++ P P
Sbjct: 89 VGQYVVTVATGSFHSGAVTE-----------SGVVYMWGENSAGQCAVANQQYVPEPNPV 137
Query: 498 CVP-----ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED 552
+ L+ ++ACG T+ L+ S ++ G+ L P VE
Sbjct: 138 SISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQKVEH 197
Query: 553 KLAGESVEEIACGAYHVAVL 572
LAG V ++ACGA+H L
Sbjct: 198 -LAGRVVLQVACGAFHSLAL 216
Score = 125 (49.1 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 570 AVLTS-RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
A+L S R EV+TWGKG +G+LGHGDV R P V+ L + V ++ G +S A+
Sbjct: 513 ALLPSLRTEVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 572
Query: 629 WVSS 632
V S
Sbjct: 573 QVYS 576
Score = 109 (43.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 54/210 (25%), Positives = 87/210 (41%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI 379
G V P L T +V G H +T GE+Y++G L ++ +
Sbjct: 26 GSCSVTPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGT-------LPWRSEPAELC 78
Query: 380 PKR--ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR--- 434
P + L G V +V G +H+ +T +G ++ +G+ + G +++ V P
Sbjct: 79 PSSPILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVS 138
Query: 435 ----EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
E L +R + +ACG HT A+ S+S +++ WG G + L
Sbjct: 139 ISDSETSPLLAVRILQLACGEEHTLAL----------SISR-EIWAWGTGCQLGL-ITTT 186
Query: 491 EPRLKPTCVPALIDYNFHKVACG--HSLTV 518
P KP V L +VACG HSL +
Sbjct: 187 FPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 51/191 (26%), Positives = 76/191 (39%)
Query: 362 GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTG-QLFTFGDGTFG 420
GT L G + VS + +R + V + T AL+ S +++T+G G G
Sbjct: 472 GTRRLSLPGLLSQVSPRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDG 531
Query: 421 VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
LGHGD P V+ L G I + G +H+ A+ + ++++WG
Sbjct: 532 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALT-----------AKSQVYSWGSN 580
Query: 481 DKNRLGHGDKEPRLKPTCVPALIDYNFHK----VACGHSLTVGLTTSGHVFTMGSTVYGQ 536
+LGH D PT VP L N VA G ++ L + F G Y
Sbjct: 581 TFGQLGHSDF-----PTTVPRLAKMNSENGVWSVAAGQDYSLFLVDTED-FQPG-LYYSG 633
Query: 537 LGNPNADGKLP 547
+P LP
Sbjct: 634 RQDPTEGDNLP 644
Score = 94 (38.1 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 34/114 (29%), Positives = 52/114 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVH--HIACGVRHAAL 297
G VY+WGE N A N Y+ V + E++ +L V +ACG H
Sbjct: 110 GVVYMWGE----NSAGQCAVANQQYVPEPNPVSISDS-ETSPLLAVRILQLACGEEHTLA 164
Query: 298 VTRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
++ E++ WG +G +LG + +P +E L V V CG FH+ A+
Sbjct: 165 LSISREIWAWG--TGCQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 38 (18.4 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHG 488
Q S +SG++F D R GHG
Sbjct: 1106 QGVYSYASGEVFEGCFQDNMRHGHG 1130
Score = 38 (18.4 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 697 SEASNRRNSLPRLSGENKDRL 717
SE RR SLP L + RL
Sbjct: 469 SEGGTRRLSLPGLLSQVSPRL 489
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 177 (67.4 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 60/208 (28%), Positives = 97/208 (46%)
Query: 260 KNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
K +Y VLL RP VL A G RH L+ G+V+++GE +
Sbjct: 23 KGYSYSTAPERVLLSRP-----VLQA---ALGARHGVLLVEGGQVYSFGELPWKQNQTSS 74
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN-AGLLGHGTDVSHW 378
+ I++ L E V FV G H+ VT G ++ WG+ H GLLG + +
Sbjct: 75 AEPILEAVLSEQ----RVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSV-IPNP 129
Query: 379 IPKRI----SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-HGDRKNVSYP 433
P + + P + +++ V CG HT +++ +++ +G G LG + V P
Sbjct: 130 TPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWGSGC--QLGLNTSTFPVWKP 187
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVI 461
++V+ LSG + VACG H+ A+V +
Sbjct: 188 QKVDHLSGRHVLQVACGSAHSVALVRCL 215
Score = 167 (63.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 70/254 (27%), Positives = 110/254 (43%)
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFT 528
V G+++++G+ + EP L+ + + VA G + + +T G V
Sbjct: 54 VEGGQVYSFGELPWKQNQTSSAEPILEAVLSEQRVVF----VAAGSAHSGVVTEDGGVHM 109
Query: 529 MGSTVYGQ---LGNPNADGKLPCLVEDKLAG--ESVE--EIACGAYHVAVLTSRNEVYTW 581
G V+GQ LG P V D A ++V+ E+ACG H L++++EV+ W
Sbjct: 110 WGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAW 169
Query: 582 GKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI--CLH--KWVSSAEQLQ 637
G G L K P V+ L RHV +ACGS +S A+ CL + Q +
Sbjct: 170 GSGCQLGLNTSTFPVWK-PQKVDHLSGRHVLQVACGSAHSVALVRCLPPPQEPRKPPQDK 228
Query: 638 CSACRQA-FGFTRKRHNC-----YNCGL-VHCHSCSSRKALRAALAPN-PGK--PYRVCD 687
C C Q + T K + ++C L V S + A+ + P PGK P
Sbjct: 229 CGQCHQLLYTMTDKEDHVIISDGHHCPLGVEMDSTEIKSAVEGSPDPGKPGKSSPTEPVP 288
Query: 688 CCFAKLNKVSEASN 701
C +++K +SN
Sbjct: 289 CMSTQISKSPTSSN 302
Score = 159 (61.0 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 38/101 (37%), Positives = 53/101 (52%)
Query: 473 KLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST 532
++++WG G +LGHGD PRL+P CV +L KVA G ++ LT VF+ G
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCN 609
Query: 533 VYGQLGNPNADGKLPCLVEDKLA-GESVEEIACGAYHVAVL 572
GQLG+ + P L KL+ G V +I G H +L
Sbjct: 610 TSGQLGHMESPTTFPQLT--KLSDGIRVWDIGAGLQHTLLL 648
Score = 139 (54.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAG 354
A L + Q EV++WG+ G+LGHG +QP ++SL V V G H+ A+T
Sbjct: 542 AHLPSLQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQS 601
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI 405
++++WG T +G LGH + + P+ ++ +G++V + G HT L+
Sbjct: 602 QVFSWGCNT--SGQLGHMESPTTF-PQ-LTKLSDGIRVWDIGAGLQHTLLL 648
Score = 137 (53.3 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 40/141 (28%), Positives = 67/141 (47%)
Query: 324 VQPHLLESLT---MTSVDFVTCGEFHTCA--VTMAGELYTWGDGTHNAGLLGHGTDVSHW 378
V P LL + M +V + G T A ++ E+++WG G G LGHG +
Sbjct: 514 VSPRLLRRTSRPRMRAVPLASGGIPETDAHLPSLQTEVWSWGQGQD--GQLGHGDLLPRL 571
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
P + L G +V V G H+ +T+ Q+F++G T G LGH + ++P+ +
Sbjct: 572 QPDCVKS-LNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMESPT-TFPQLTKL 629
Query: 439 LSGLRTIAVACGVWHTAAVVE 459
G+R + G+ HT + +
Sbjct: 630 SDGIRVWDIGAGLQHTLLLAD 650
Score = 116 (45.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSS 632
+ EV++WG+G +G+LGHGD+ R P V++L + V +A G+++S A+ V S
Sbjct: 548 QTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFS 605
Score = 111 (44.1 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 526 VFTMGSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
V++ G GQLG+ + +L P V+ L G+ V ++A GA+H LT++++V++WG
Sbjct: 551 VWSWGQGQDGQLGHGDLLPRLQPDCVKS-LNGKEVLKVAAGAHHSLALTAQSQVFSWGCN 609
Query: 585 ANGRLGH 591
+G+LGH
Sbjct: 610 TSGQLGH 616
Score = 102 (41.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 41/137 (29%), Positives = 63/137 (45%)
Query: 367 GLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 425
GLL + VS + +R S P + + +AS L + +++++G G G LGHG
Sbjct: 509 GLL---SQVSPRLLRRTSRPRMRAVPLASGGIPETDAHLPSLQTEVWSWGQGQDGQLGHG 565
Query: 426 DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
D P V+SL+G + VA G H+ A + QS ++F+WG +L
Sbjct: 566 DLLPRLQPDCVKSLNGKEVLKVAAGAHHSLA----LTAQS-------QVFSWGCNTSGQL 614
Query: 486 GHGDKEPRLKPTCVPAL 502
GH + PT P L
Sbjct: 615 GHMES-----PTTFPQL 626
Score = 90 (36.7 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V++WGE + G N T VL V + +ACG +H ++
Sbjct: 105 GGVHMWGENVHGQCGLLGLSVIPN--PTPVGVLDSEATPPQTV-KILEVACGDQHTLALS 161
Query: 300 RQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
+ EV+ WG SG +LG + +P ++ L+ V V CG H+ A+
Sbjct: 162 AKHEVWAWG--SGCQLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVAL 211
Score = 43 (20.2 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 737 KQLDCKAAKQGKKADAFSLVRSSQAP--SLLQLKDVVLTTAADLRRTTPKP 785
++L + + QGKK+ + +R +A L L ++ + L R T +P
Sbjct: 475 ERLRLEESMQGKKSSSLGDIREEEAELSRRLSLPGLLSQVSPRLLRRTSRP 525
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 282 (104.3 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 90/319 (28%), Positives = 142/319 (44%)
Query: 288 IACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ G H A+VT + E++TW G + G+LGHG QP +E L ++ V+C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 433
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLG----HGTDVSHWIPKRISGPLEGLQVASVTCG 398
G+ T VT G+LY +G + G +G G +V P +++ L V V+CG
Sbjct: 434 GDDFTVCVTDEGQLYAFGSDYY--GCMGVDKVSGPEVLE--PMQLNFFLSN-PVEQVSCG 488
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
H ++T +++++G G +G LG ++ P+ V+ L +AV CG T
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGT---- 544
Query: 459 EVIVTQSSASVSSG--KLFTWG-----DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
++TQS ++ G + G G N + + T L Y +A
Sbjct: 545 -FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 603
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVA 570
G + T + G + T G GQLG N +L L+ L G+ V ++CG
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTI 663
Query: 571 VLTSRNEVYTWGKGANGRL 589
T N ++ WG G NGRL
Sbjct: 664 AATDDNHIFAWGNGGNGRL 682
Score = 258 (95.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 98/349 (28%), Positives = 146/349 (41%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM-TSVDFVTCGEFHTCAVTMA 353
A + +R EV+ WG GG+ P L+ + S V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGKS---------TPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 354 GELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQ 410
ELYTW + GT G LGHG S+ PK + L+G + V+CG T +T GQ
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVE-KLQGKAIHQVSCGDDFTVCVTDEGQ 446
Query: 411 LFTFGDGTFGVLGHG--DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
L+ FG +G +G V P ++ V+CG H V++T++
Sbjct: 447 LYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHV-----VVLTRNK-- 499
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFT 528
++++WG G+ RLG +E P V V CG T LT SG V
Sbjct: 500 ----EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLA 555
Query: 529 MGSTVYGQLG---------NPNADGKLPCLVEDKLAGE----SVEEIACGAYHVAVLTSR 575
G + +LG N A ++P LA + + IA G H A + R
Sbjct: 556 CGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDER 615
Query: 576 NEVYTWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGSNYSAA 623
+ T+G G+LG G+ + R L+ L + V ++CG ++ A
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 248 (92.4 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 83/332 (25%), Positives = 147/332 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--GKDI 323
G +A P+ +E +H ++CG VT +G+++ +G + G +G G ++
Sbjct: 409 GDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEV 468
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
++P L V+ V+CG+ H +T E+Y+WG G + G LG ++ ++ P+R+
Sbjct: 469 LEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTPQRV 526
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF----------GVLGHGDRKNVSYP 433
P + L + +V CG T L+T +G++ G F G++ H V Y
Sbjct: 527 DVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYT 585
Query: 434 RE---VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
+ LS + +A G HTAA+ E G+L T+G +LG G+
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAIDE-----------RGRLLTFGCNKCGQLGVGNY 634
Query: 491 EPRLKPTCVPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNA--DGKL 546
+ RL + L +V+CG T+ T H+F G+ G+L P G
Sbjct: 635 KKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSD 694
Query: 547 PCLVEDK-LAGE--SVEEIACGAYHVAVLTSR 575
C + + G V +++C +H ++ +
Sbjct: 695 ICTSWPRPIFGSLHHVPDLSCRGWHTILIVEK 726
Score = 233 (87.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 76/244 (31%), Positives = 114/244 (46%)
Query: 383 ISGPLEGLQVASVTCGPWHTALITS-TGQLFTFGDGTFGVLGHGDRKNVSYPREVESL-S 440
++ P + + ++VT P A++TS T +++ +G G S P++++ + S
Sbjct: 322 LNAPTKRPRSSTVTEAP--IAVVTSRTSEVYVWGGGK------------STPQKLDVIKS 367
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD---GDK--NRLGHGDKEPRLK 495
G V G H A +VT +L+TW + G K +LGHGDK +
Sbjct: 368 GCSARQVCAGNTHFA-----VVTVEK------ELYTWVNMQGGTKLHGQLGHGDKASYRQ 416
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK--LPCLVEDK 553
P V L H+V+CG TV +T G ++ GS YG +G G L + +
Sbjct: 417 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 476
Query: 554 LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
VE+++CG HV VLT EVY+WG G GRLG ED TP V+ K +
Sbjct: 477 FLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVA 536
Query: 614 IACG 617
+ CG
Sbjct: 537 VQCG 540
Score = 149 (57.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 47/154 (30%), Positives = 70/154 (45%)
Query: 328 LLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
L + L+ + + G+ HT A+ G L T+G + G LG G + GPL
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPL 647
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-------HGDRKNVSYPREVESLS 440
G QV V+CG T T +F +G+G G L HG S+PR +
Sbjct: 648 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI--FG 705
Query: 441 GLRTIA-VACGVWHTAAVVE-VIVTQSSASVSSG 472
L + ++C WHT +VE V+ +++ S SSG
Sbjct: 706 SLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSG 739
Score = 137 (53.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 55/196 (28%), Positives = 82/196 (41%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGT-RADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
+VY WG C + G D +Y R DV P+ L +++ V CG L+T
Sbjct: 500 EVYSWG---CGEYGRLGLDSEEDYYTPQRVDV--PKAL---IIVAVQ---CGCDGTFLLT 548
Query: 300 RQGEVFTWGEESGGRLG-HGVGKDIVQ-------PH-----LLESLTMTSVDFVTCGEFH 346
+ G+V G +LG + I+ P+ L + L+ + + G+ H
Sbjct: 549 QSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 608
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
T A+ G L T+G + G LG G + GPL G QV V+CG T T
Sbjct: 609 TAAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAAT 666
Query: 407 STGQLFTFGDGTFGVL 422
+F +G+G G L
Sbjct: 667 DDNHIFAWGNGGNGRL 682
Score = 45 (20.9 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 29/89 (32%), Positives = 39/89 (43%)
Query: 955 DSVSNNGTGGLSQFLRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQD 1014
DS + T S R T A R + +I P +VG NS S S G L++
Sbjct: 771 DSQQESETPDPSGGFRGTMEAD-RGMEGLIS-PTEAVG---NSCGASSSCPGWLRKELEN 825
Query: 1015 SENGTRPRSPA-LSVSSHQVEAEWIEQYE 1042
+E P SPA LS + Q E + + YE
Sbjct: 826 AEFIPMPDSPAPLSAAFSQSEKDTLP-YE 853
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 176 (67.0 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 39/81 (48%), Positives = 49/81 (60%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P + PLE VA+V+CG HTA +T G+L T+G G +G LGHGDR + +PR VE L
Sbjct: 107 PALLDLPLEPA-VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQL 165
Query: 440 --SGLRTIAVACGVWHTAAVV 458
GLR V CG W+T V
Sbjct: 166 WAEGLRAQEVVCGPWNTYVCV 186
Score = 152 (58.6 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 35/78 (44%), Positives = 44/78 (56%)
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG 385
P LL+ +V V+CG HT A+T GEL TWG G + G LGHG S P+R+
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKY--GQLGHGDRASCDHPRRVEQ 164
Query: 386 P-LEGLQVASVTCGPWHT 402
EGL+ V CGPW+T
Sbjct: 165 LWAEGLRAQEVVCGPWNT 182
Score = 118 (46.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
P L++ L +V ++CG+ H A LT E+ TWG G G+LGHGD P VE L
Sbjct: 107 PALLDLPLE-PAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQL 165
Query: 607 --KDRHVKYIACGSNYSAAICL 626
+ + + CG ++ +C+
Sbjct: 166 WAEGLRAQEVVCGP-WNTYVCV 186
Score = 118 (46.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 33/87 (37%), Positives = 42/87 (48%)
Query: 272 LLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLES 331
LL PLE V ++CG RH A +TR GE+ TWG G+LGHG P +E
Sbjct: 109 LLDLPLEPAVAA----VSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQ 164
Query: 332 LTMTSV--DFVTCGEFHT-CAVTMAGE 355
L + V CG ++T V GE
Sbjct: 165 LWAEGLRAQEVVCGPWNTYVCVLQQGE 191
Score = 101 (40.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LGHG ++ PR VE+L G+ AVA G WH+A V + G L+ WG
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSD-----------GGDLYVWGW 59
Query: 480 GDKNRLG 486
+ +LG
Sbjct: 60 NESGQLG 66
Score = 99 (39.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 364 HNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG 423
H G LGHG+ S P+ + L G+ + +V G WH+A ++ G L+ +G G LG
Sbjct: 8 HRHGQLGHGSLESEQQPRLVEA-LGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Query: 424 HGDRKNVSYPREVESL 439
R E E +
Sbjct: 67 LPSRAVAEEQAEDEDM 82
Score = 98 (39.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 313 GRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG 370
G+LGHG + QP L+E+L + V G +H+ V+ G+LY WG + +G LG
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWG--WNESGQLG 66
Score = 88 (36.0 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 28/78 (35%), Positives = 37/78 (47%)
Query: 500 PALIDYNFHK----VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN-ADGKLPCLVEDKL 554
PAL+D V+CG T LT G + T G YGQLG+ + A P VE
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLW 166
Query: 555 A-GESVEEIACGAYHVAV 571
A G +E+ CG ++ V
Sbjct: 167 AEGLRAQEVVCGPWNTYV 184
Score = 75 (31.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 25/70 (35%), Positives = 31/70 (44%)
Query: 446 AVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY 505
AV+CG HTAA+ G+L TWG G +LGHGD+ P V L
Sbjct: 120 AVSCGSRHTAALTR-----------GGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAE 168
Query: 506 NFH--KVACG 513
+V CG
Sbjct: 169 GLRAQEVVCG 178
Score = 72 (30.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 484 RLGHGDKEPRLKPTCVPALIDYNFHKVACG--HSLTVGLTTSGHVFTMGSTVYGQLGNPN 541
+LGHG E +P V AL VA G HS V + G ++ G GQLG P+
Sbjct: 12 QLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACV--SDGGDLYVWGWNESGQLGLPS 69
Score = 69 (29.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 274 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
PR +E+ + + +A G H+A V+ G+++ WG G+LG
Sbjct: 24 PRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 44 (20.5 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 128 GGRSKIDGWNDGGLYLEDSRDLTSNSASDSSV 159
GG + GWN+ G SR + A D +
Sbjct: 51 GGDLYVWGWNESGQLGLPSRAVAEEQAEDEDM 82
Score = 40 (19.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 5/7 (71%), Positives = 7/7 (100%)
Query: 240 GDVYIWG 246
GD+Y+WG
Sbjct: 52 GDLYVWG 58
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 263 (97.6 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 97/348 (27%), Positives = 158/348 (45%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC--GEFHTCA 349
V H + T G V T G+ G+LG +G+++++ +L D V G HT
Sbjct: 25 VSHRSHSTEPGLVLTLGQGDVGQLG--LGENVME-RKKPALVPIPEDIVQAEAGGMHTVC 81
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 82 LSKSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTE 136
Query: 408 TGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
G++F +G GV+G + K P +V+ LS + + VA G H +
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LS-MPVVKVASGNDHLVMLTADGELY 194
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI-----DYNFHKVACGHSLTVG 519
+ S G+L + NR G E L P CV F CG T
Sbjct: 195 TLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGK-LPC-LVEDKLAGESVEEIACGAYHVAVLTSRNE 577
+++ GHV+ G + Y QLG P + +P L K + +S + G +H + S
Sbjct: 255 ISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGR 314
Query: 578 VYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
Y+ G+ GRLG G+ E++ P L+ L V +ACG++ A+
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSVPTLISRLPA--VSSVACGASVGYAV 360
Score = 247 (92.0 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 94/384 (24%), Positives = 175/384 (45%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG +V+ +P + D+ G H +++ G+V+++G G LG
Sbjct: 44 DVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--KNVSYP 433
+P ++ + ++VAS G H ++T+ G+L+T G G G LG N
Sbjct: 161 KSMVPVQVQLSMPVVKVAS---GNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGR 217
Query: 434 REVESLSGLRTIAVAC--GVWHTAAVVEVIVTQSSASVSS-GKLFTWGDGDKNRLGHGDK 490
+ +E L + + + H + ++SS G ++ +G + ++LG
Sbjct: 218 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGT 277
Query: 491 EPRLKPTCVPALIDY--NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGK-L 546
E P + + + ++ + + G TV + + G +++G YG+LG A+ K +
Sbjct: 278 ESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSV 337
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV--E 604
P L+ +L +V +ACGA +T V+ WG G N +LG G ED +P + +
Sbjct: 338 PTLIS-RLP--AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGK 394
Query: 605 ALKDRHVKYIACGSNYSAAICLHK 628
L++R V ++ G ++ + K
Sbjct: 395 QLENRMVLSVSSGGQHTVLLVKDK 418
Score = 142 (55.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 46/138 (33%), Positives = 67/138 (48%)
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKPTCVPALIDYNFHKVACGHSLT 517
+V V+ S S G + T G GD +LG G+ R KP VP I + + G T
Sbjct: 22 KVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVP--IPEDIVQAEAGGMHT 79
Query: 518 VGLTTSGHVFTMGSTVYGQLG-NPNADGK--LPCLVEDKLAGESVEEIACGAYHVAVLTS 574
V L+ SG V++ G G LG + + +G +P VE + E V +++ G H A LT
Sbjct: 80 VCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ---EKVVQVSAGDSHTAALTE 136
Query: 575 RNEVYTWG--KGANGRLG 590
V+ WG + NG +G
Sbjct: 137 DGRVFLWGSFRDNNGVIG 154
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 283 (104.7 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 91/319 (28%), Positives = 142/319 (44%)
Query: 288 IACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ G H A+VT + E++TW G + G+LGHG QP +E L ++ V+C
Sbjct: 391 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 450
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLG----HGTDVSHWIPKRISGPLEGLQVASVTCG 398
G+ T VT G+LY +G + G +G G +V P ++ L V V+CG
Sbjct: 451 GDDFTVCVTDEGQLYAFGSDYY--GCMGVDKVAGAEVLE--PMQLDFFLSN-PVEQVSCG 505
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
H ++T +++++G G +G LG ++ P++V+ L +AV CG T
Sbjct: 506 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT---- 561
Query: 459 EVIVTQSSASVSSG--KLFTWG-----DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
++TQS ++ G + G G N + + T L Y +A
Sbjct: 562 -FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 620
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVA 570
G + T L G + T G GQLG N +L L+ L G+ V ++CG
Sbjct: 621 PGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTI 680
Query: 571 VLTSRNEVYTWGKGANGRL 589
T N ++ WG G NGRL
Sbjct: 681 AATDDNHIFAWGNGGNGRL 699
Score = 263 (97.6 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 100/350 (28%), Positives = 149/350 (42%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM-TSVDFVTCGEFHTCAVTMA 353
A + +R EV+ WG GG+ P L+ + S V G H VT+
Sbjct: 357 AVVTSRTSEVYVWG---GGKS---------TPQKLDVIKSGCSARQVCAGNTHFAVVTVE 404
Query: 354 GELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQ 410
ELYTW + GT G LGHG S+ PK + L+G + V+CG T +T GQ
Sbjct: 405 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDEGQ 463
Query: 411 LFTFGDGTFGVLGHGDR---KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
L+ FG +G +G D+ V P +++ V+CG H V++T++
Sbjct: 464 LYAFGSDYYGCMGV-DKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHV-----VVLTRNK- 516
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
++++WG G+ RLG +E P V V CG T LT SG V
Sbjct: 517 -----EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVL 571
Query: 528 TMGSTVYGQLG---------NPNADGKLPCLVEDKLAGE----SVEEIACGAYHVAVLTS 574
G + +LG N A ++P LA + + IA G H A L
Sbjct: 572 ACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDE 631
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGSNYSAA 623
R + T+G G+LG G+ + R L+ L + V ++CG ++ A
Sbjct: 632 RGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 681
Score = 237 (88.5 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 71/280 (25%), Positives = 130/280 (46%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VGKDI 323
G +A P+ +E + ++CG VT +G+++ +G + G +G G ++
Sbjct: 426 GDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEV 485
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
++P L+ V+ V+CG+ H +T E+Y+WG G + G LG ++ ++ P+++
Sbjct: 486 LEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTPQKV 543
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-----HGDRKNVSYPREVES 438
P + L + +V CG T L+T +G++ G F LG G + +Y EV
Sbjct: 544 DVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY-HEVPY 601
Query: 439 LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTC 498
+ T+A + + T ++A G+L T+G +LG G+ + RL
Sbjct: 602 TTSF-TLAKQLSFYKIRTIAPG-KTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINL 659
Query: 499 VPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
+ L +V+CG T+ T H+F G+ G+L
Sbjct: 660 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 699
Score = 228 (85.3 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 76/244 (31%), Positives = 113/244 (46%)
Query: 383 ISGPLEGLQVASVTCGPWHTALITS-TGQLFTFGDGTFGVLGHGDRKNVSYPREVESL-S 440
++ P + + ++VT P A++TS T +++ +G G S P++++ + S
Sbjct: 339 LNAPTKRPRSSTVTEAP--IAVVTSRTSEVYVWGGGK------------STPQKLDVIKS 384
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD---GDK--NRLGHGDKEPRLK 495
G V G H A +VT +L+TW + G K +LGHGDK +
Sbjct: 385 GCSARQVCAGNTHFA-----VVTVEK------ELYTWVNMQGGTKLHGQLGHGDKASYRQ 433
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK--LPCLVEDK 553
P V L +V+CG TV +T G ++ GS YG +G G L + D
Sbjct: 434 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDF 493
Query: 554 LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
VE+++CG HV VLT EVY+WG G GRLG ED TP V+ K +
Sbjct: 494 FLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVA 553
Query: 614 IACG 617
+ CG
Sbjct: 554 VQCG 557
Score = 190 (71.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 68/256 (26%), Positives = 107/256 (41%)
Query: 269 ADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHL 328
A+VL P L+ + V ++CG H ++TR EV++WG GRLG +D P
Sbjct: 483 AEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQK 542
Query: 329 LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN--------AGLLGHGT--DVSHW 378
++ + V CG T +T +G++ G N +G++ H +V +
Sbjct: 543 VDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYT 602
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD-RKNVSYPREVE 437
++ L ++ ++ G HTA + G+L TFG G LG G+ +K +
Sbjct: 603 TSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG 662
Query: 438 SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKP 496
L G + I V+CG T A + +F WG+G RL E P
Sbjct: 663 PLGGKQVIRVSCGDEFTIAATD-----------DNHIFAWGNGGNGRLAMTPTERPHGSD 711
Query: 497 TCV--PALIDYNFHKV 510
C P I + H V
Sbjct: 712 ICTSWPRPIFGSLHHV 727
Score = 140 (54.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 46/154 (29%), Positives = 70/154 (45%)
Query: 328 LLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
L + L+ + + G+ HT A+ G L T+G + G LG G + GPL
Sbjct: 607 LAKQLSFYKIRTIAPGKTHTAALDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPL 664
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-------HGDRKNVSYPREVESLS 440
G QV V+CG T T +F +G+G G L HG S+PR +
Sbjct: 665 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI--FG 722
Query: 441 GLRTIA-VACGVWHTAAVVE-VIVTQSSASVSSG 472
L + ++C W+T +VE V+ +++ S SSG
Sbjct: 723 SLHHVPDLSCRGWNTILIVEKVLNSKTIRSNSSG 756
Score = 39 (18.8 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 1018 GTRPRSPALSVSSHQVEAEWIE 1039
GT P +P + SS QVE E ++
Sbjct: 898 GT-PLAPTCACSSLQVEVERLQ 918
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 281 (104.0 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 90/319 (28%), Positives = 143/319 (44%)
Query: 288 IACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ G H A+VT + E++TW G + G+LGHG QP +E L ++ V+C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLG----HGTDVSHWIPKRISGPLEGLQVASVTCG 398
G+ T VT G+LY +G + G +G G +V P +++ L V V+CG
Sbjct: 434 GDDFTVCVTDEGQLYAFGSDYY--GCMGVDKVAGPEVLE--PMQLNFFLSN-PVEQVSCG 488
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
H ++T +++++G G +G LG ++ P++V+ L +AV CG T
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT---- 544
Query: 459 EVIVTQSSASVSSG--KLFTWG-----DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
++TQS ++ G + G G N + + T L Y +A
Sbjct: 545 -FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 603
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVA 570
G + T + G + T G GQLG N +L L+ L G+ V ++CG
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTI 663
Query: 571 VLTSRNEVYTWGKGANGRL 589
T N ++ WG G NGRL
Sbjct: 664 AATDDNHIFAWGNGGNGRL 682
Score = 259 (96.2 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 99/350 (28%), Positives = 148/350 (42%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM-TSVDFVTCGEFHTCAVTMA 353
A + +R EV+ WG GG+ P L+ + S V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGKS---------TPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 354 GELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQ 410
ELYTW + GT G LGHG S+ PK + L+G + V+CG T +T GQ
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDEGQ 446
Query: 411 LFTFGDGTFGVLGHGDR---KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
L+ FG +G +G D+ V P ++ V+CG H V++T++
Sbjct: 447 LYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV-----VVLTRNK- 499
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
++++WG G+ RLG +E P V V CG T LT SG V
Sbjct: 500 -----EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVL 554
Query: 528 TMGSTVYGQLG---------NPNADGKLPCLVEDKLAGE----SVEEIACGAYHVAVLTS 574
G + +LG N A ++P LA + + IA G H A +
Sbjct: 555 ACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE 614
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGSNYSAA 623
R + T+G G+LG G+ + R L+ L + V ++CG ++ A
Sbjct: 615 RGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 239 (89.2 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 81/332 (24%), Positives = 146/332 (43%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VGKDI 323
G +A P+ +E + ++CG VT +G+++ +G + G +G G ++
Sbjct: 409 GDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEV 468
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
++P L V+ V+CG+ H +T E+Y+WG G + G LG ++ ++ P+++
Sbjct: 469 LEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTPQKV 526
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF----------GVLGHGDRKNVSYP 433
P + L + +V CG T L+T +G++ G F G++ H V Y
Sbjct: 527 DVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYT 585
Query: 434 RE---VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
+ LS + +A G HTAA+ E G+L T+G +LG G+
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAIDE-----------RGRLLTFGCNKCGQLGVGNY 634
Query: 491 EPRLKPTCVPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNA--DGKL 546
+ RL + L +V+CG T+ T H+F G+ G+L P G
Sbjct: 635 KKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSD 694
Query: 547 PCLVEDK-LAGE--SVEEIACGAYHVAVLTSR 575
C + + G V +++C +H ++ +
Sbjct: 695 ICTSWPRPIFGSLHHVPDLSCRGWHTILIVEK 726
Score = 223 (83.6 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 75/244 (30%), Positives = 113/244 (46%)
Query: 383 ISGPLEGLQVASVTCGPWHTALITS-TGQLFTFGDGTFGVLGHGDRKNVSYPREVESL-S 440
++ P + + ++VT P A++TS T +++ +G G S P++++ + S
Sbjct: 322 LNAPTKRPRSSTVTEAP--IAVVTSRTSEVYVWGGGK------------STPQKLDVIKS 367
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD---GDK--NRLGHGDKEPRLK 495
G V G H A +VT +L+TW + G K +LGHGDK +
Sbjct: 368 GCSARQVCAGNTHFA-----VVTVEK------ELYTWVNMQGGTKLHGQLGHGDKASYRQ 416
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK--LPCLVEDK 553
P V L +V+CG TV +T G ++ GS YG +G G L + +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 554 LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
VE+++CG HV VLT EVY+WG G GRLG ED TP V+ K +
Sbjct: 477 FLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVA 536
Query: 614 IACG 617
+ CG
Sbjct: 537 VQCG 540
Score = 150 (57.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 50/178 (28%), Positives = 78/178 (43%)
Query: 328 LLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
L + L+ + + G+ HT A+ G L T+G + G LG G + GPL
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPL 647
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-------HGDRKNVSYPREVESLS 440
G QV V+CG T T +F +G+G G L HG S+PR +
Sbjct: 648 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI--FG 705
Query: 441 GLRTIA-VACGVWHTAAVVEVI-----VTQSSASVSSGKLF-TWGDGDKNRLGHGDKE 491
L + ++C WHT +VE + + +S+ +S G +F + G G G++E
Sbjct: 706 SLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVFQSSSPGGGGGGGGGEEE 763
Score = 138 (53.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 54/195 (27%), Positives = 82/195 (42%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
+VY WG C + G D +Y T V +P+ L +++ V CG L+T+
Sbjct: 500 EVYSWG---CGEYGRLGLDSEEDYY-TPQKVDVPKAL---IIVAVQ---CGCDGTFLLTQ 549
Query: 301 QGEVFTWGEESGGRLG-HGVGKDIVQ-------PH-----LLESLTMTSVDFVTCGEFHT 347
G+V G +LG + I+ P+ L + L+ + + G+ HT
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHT 609
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
A+ G L T+G + G LG G + GPL G QV V+CG T T
Sbjct: 610 AAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667
Query: 408 TGQLFTFGDGTFGVL 422
+F +G+G G L
Sbjct: 668 DNHIFAWGNGGNGRL 682
Score = 40 (19.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 1002 ESSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIE 1039
E+S + + + + GT PA + SS QVE E ++
Sbjct: 866 EASSPRLNPAVTCAGKGTPLTPPACACSSLQVEVERLQ 903
Score = 39 (18.8 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 994 LANSSCVSESSEGKESMPLQDSENGTRPRSPA-LSVSSHQVEAEWIEQYE 1042
+ NS+ S S G L+++E P SP+ LS + + E + + YE
Sbjct: 798 MGNSNGASSSCPGWLRKELENAEFIPMPDSPSPLSAAFSESEKDTLP-YE 846
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 277 (102.6 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 88/313 (28%), Positives = 136/313 (43%)
Query: 288 IACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ G H A+VT + E++TW G + G+LGHG QP +E L SV V+C
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSC 415
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI--PKRISGPLEGLQVASVTCGPW 400
G T +T G+LY++G + G LG + P + L V V+CG
Sbjct: 416 GSDFTVCITDEGQLYSFGSDYY--GCLGVNQSAGSEVLEPLLVDFFLNE-PVDQVSCGDS 472
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV-- 458
H +T + ++++G G +G LG +V P++VE GL + V CG + +
Sbjct: 473 HIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLT 532
Query: 459 -EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLT 517
+V+ + G L + G N + T L Y ++ G + T
Sbjct: 533 GKVLACGLNEHNKLG-LNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHT 591
Query: 518 VGLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVAVLTSRN 576
+ G + T GS GQLG + L L+ L G+ V ++CG T+ N
Sbjct: 592 AAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADN 651
Query: 577 EVYTWGKGANGRL 589
++ WG G NGRL
Sbjct: 652 HIFAWGNGGNGRL 664
Score = 255 (94.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 84/332 (25%), Positives = 149/332 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG--HGVGKDI 323
G RA P+ +E V ++CG +T +G+++++G + G LG G ++
Sbjct: 391 GDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEV 450
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
++P L++ VD V+CG+ H A+T + +Y+WG G + G LG ++ + P+++
Sbjct: 451 LEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEY--GRLGLDSEDDVYSPQKV 508
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFG----------DGTFGVLGHGDRKNVSYP 433
GL + +V CG + L+T TG++ G T G++ H + V Y
Sbjct: 509 EVQ-RGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYT 567
Query: 434 REV---ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
+ + LS + +++ G HTAA+ E G+L T+G +LG GD
Sbjct: 568 TSLTLAKQLSFYKIRSISPGRTHTAAIDE-----------RGRLLTFGSNKCGQLGVGDY 616
Query: 491 EPRLKPTCVPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNA--DGKL 546
L + L +V+CG T T H+F G+ G+L PN G
Sbjct: 617 RKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSD 676
Query: 547 PCLVEDK-LAGE--SVEEIACGAYHVAVLTSR 575
C + + G V +++C +H ++ +
Sbjct: 677 ICTSWPRPIFGSLHHVTDLSCRGWHTILIVEK 708
Score = 251 (93.4 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 97/349 (27%), Positives = 143/349 (40%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT-SVDFVTCGEFHTCAVTMA 353
A + +R EV+ WG GG+ P L+ V G+ H VT+
Sbjct: 322 AVVTSRSSEVYVWG---GGK---------TTPQKLDVFKGGWRARQVCAGDAHFAVVTVE 369
Query: 354 GELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQ 410
ELYTW + G+ G LGHG S+ PK + L+G V V+CG T IT GQ
Sbjct: 370 KELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVE-KLQGKSVQKVSCGSDFTVCITDEGQ 428
Query: 411 LFTFGDGTFGVLGHGDR--KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
L++FG +G LG V P V+ V+CG H A+ T+S +
Sbjct: 429 LYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMAL-----TRSKS- 482
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFT 528
+++WG G+ RLG ++ P V V CG + LT +G V
Sbjct: 483 -----VYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLA 537
Query: 529 MGSTVYGQLG---------NPNADGKLPCLVEDKLAGE----SVEEIACGAYHVAVLTSR 575
G + +LG N A ++P LA + + I+ G H A + R
Sbjct: 538 CGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDER 597
Query: 576 NEVYTWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGSNYSAA 623
+ T+G G+LG GD L+ L + V ++CG ++ A
Sbjct: 598 GRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTA 646
Score = 237 (88.5 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 58/162 (35%), Positives = 86/162 (53%)
Query: 473 KLFTWGD---GDK--NRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
+L+TW + G K +LGHGD+ +P V L + KV+CG TV +T G ++
Sbjct: 371 ELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLY 430
Query: 528 TMGSTVYGQLG-NPNADGKL--PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
+ GS YG LG N +A ++ P LV D E V++++CG H+ LT VY+WG G
Sbjct: 431 SFGSDYYGCLGVNQSAGSEVLEPLLV-DFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCG 489
Query: 585 ANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
GRLG +D +P VE + + + CGS+ S + L
Sbjct: 490 EYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTL 531
Score = 152 (58.6 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 47/154 (30%), Positives = 72/154 (46%)
Query: 328 LLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
L + L+ + ++ G HT A+ G L T+G ++ G LG G H + GPL
Sbjct: 572 LAKQLSFYKIRSISPGRTHTAAIDERGRLLTFG--SNKCGQLGVGDYRKHLGINLLGGPL 629
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-------HGDRKNVSYPREVESLS 440
G QV V+CG T T+ +F +G+G G L G S+PR +
Sbjct: 630 GGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPI--FG 687
Query: 441 GLRTIA-VACGVWHTAAVVE-VIVTQSSASVSSG 472
L + ++C WHT +VE V+ +++ S SSG
Sbjct: 688 SLHHVTDLSCRGWHTILIVEKVLNSKTIRSNSSG 721
Score = 148 (57.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 54/194 (27%), Positives = 83/194 (42%)
Query: 242 VYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQ 301
VY WG C + G D + DV P+ +E L + ++ CG + L+T
Sbjct: 483 VYSWG---CGEYGRLGLD-------SEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLT 532
Query: 302 GEVFTWGEESGGRLGHG------VGKDIVQ--PH-----LLESLTMTSVDFVTCGEFHTC 348
G+V G +LG + + Q P+ L + L+ + ++ G HT
Sbjct: 533 GKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTA 592
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
A+ G L T+G ++ G LG G H + GPL G QV V+CG T T+
Sbjct: 593 AIDERGRLLTFG--SNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATAD 650
Query: 409 GQLFTFGDGTFGVL 422
+F +G+G G L
Sbjct: 651 NHIFAWGNGGNGRL 664
Score = 42 (19.8 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 1008 ESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVR 1063
E+ P +EN P+ + EAE+I + +++ + ++GT ++ VR
Sbjct: 765 ETGPFNTTENMESSSCPSW-LRQELEEAEFIPMPDTPNFVSAESSQNGTTSMQDVR 819
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 164 (62.8 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 61/218 (27%), Positives = 107/218 (49%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPH---LLES-LTMTSVDFV 340
V H A G H L+ G+V+++GE+ K + P +LES L+ V V
Sbjct: 34 VLHAALGSLHGLLLIEGGQVYSFGEQPW--------KPVEPPPASLVLESTLSGQHVISV 85
Query: 341 TCGEFHTCAVTMAGELYTWGDGTHNAGLLG-HGTD-VSHWIPKRI----SGPLEGLQVAS 394
+ G +H AVT G + WG+ ++ G G GTD V P + + P + ++V +
Sbjct: 86 SAGSYHCSAVTEDGLVLMWGENSY--GQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLN 143
Query: 395 VTCGPWHTALITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWH 453
V CG HT +++ +++ +G G G++ + V P++VE L G + +ACG +H
Sbjct: 144 VACGAQHTLALSNKHEVWAWGSGCQLGLVTNVFP--VWKPQKVEHLVGRYVVQIACGAFH 201
Query: 454 TAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
+ A+V+ + + ++ + K G ++ R DKE
Sbjct: 202 SLALVQFLPSPDASQQAQDKC---GQCNQIRYTMTDKE 236
Score = 163 (62.4 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 36/102 (35%), Positives = 57/102 (55%)
Query: 473 KLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST 532
++++WG G + +LGHGD PRL+P C+ +L K+ G + ++ LT V++ GS
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSE 580
Query: 533 VYGQLGNPNADGKLPCL--VEDKLAGESVEEIACGAYHVAVL 572
+GQLG N+ +P L V D G V ++A G H +L
Sbjct: 581 KFGQLGRMNSPSTVPNLTTVSD---GIRVWDVAAGQTHTLLL 619
Score = 121 (47.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 54/190 (28%), Positives = 79/190 (41%)
Query: 392 VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGV 451
V G H L+ GQ+++FG+ + + + S E +LSG I+V+ G
Sbjct: 34 VLHAALGSLHGLLLIEGGQVYSFGEQPWKPV---EPPPASLVLE-STLSGQHVISVSAGS 89
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH--- 508
+H +AV E G + WG+ + G + PT V ++D H
Sbjct: 90 YHCSAVTE-----------DGLVLMWGENSYGQCGVSGTDRVPSPTPV-TVVDDETHPPQ 137
Query: 509 -----KVACGHSLTVGLTTSGHVFTMGSTVY-GQLGNPNADGKLPCLVEDKLAGESVEEI 562
VACG T+ L+ V+ GS G + N K P VE L G V +I
Sbjct: 138 LVRVLNVACGAQHTLALSNKHEVWAWGSGCQLGLVTNVFPVWK-PQKVEH-LVGRYVVQI 195
Query: 563 ACGAYHVAVL 572
ACGA+H L
Sbjct: 196 ACGAFHSLAL 205
Score = 117 (46.2 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 577 EVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI---C-LHKWVS 631
EV++WGKG G+LGHGD R P +++L + V I G+N+S A+ C ++ W S
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGS 579
Score = 93 (37.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 526 VFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
V++ G GQLG+ + +L L L+ + V +I GA H LT++ +VY+WG
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEK 581
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
G+LG + P L V +A G ++
Sbjct: 582 FGQLGRMN-SPSTVPNLTTVSDGIRVWDVAAGQTHT 616
Score = 38 (18.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 1013 QDSENGTRPRSPALS 1027
Q E RP SPALS
Sbjct: 371 QSDELTLRPSSPALS 385
Score = 38 (18.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 274 PRPLESNVVLDVHHIACGVRHA-ALV 298
P+ +E V V IACG H+ ALV
Sbjct: 181 PQKVEHLVGRYVVQIACGAFHSLALV 206
Score = 37 (18.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 138 DGGLYLED 145
DGG+YL D
Sbjct: 430 DGGIYLSD 437
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 279 (103.3 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 90/319 (28%), Positives = 142/319 (44%)
Query: 288 IACGVRHAALVTRQGEVFTW-----GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
+ G H A+VT + E++TW G + G+LGHG QP +E L ++ V+C
Sbjct: 393 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 452
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLG----HGTDVSHWIPKRISGPLEGLQVASVTCG 398
G+ T VT G+LY +G + G +G G +V P +++ V V+CG
Sbjct: 453 GDDFTVCVTDEGQLYAFGSDYY--GCMGVDKVAGPEVLE--PMQLNF-FSNNPVEQVSCG 507
Query: 399 PWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
H ++T +++++G G +G LG ++ P++V+ L +AV CG T
Sbjct: 508 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT---- 563
Query: 459 EVIVTQSSASVSSG--KLFTWG-----DGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
++TQS ++ G + G G N + + T L Y VA
Sbjct: 564 -FLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVA 622
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPC-LVEDKLAGESVEEIACGAYHVA 570
G + T + G + T G GQLG N +L L+ L G+ V ++CG
Sbjct: 623 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTI 682
Query: 571 VLTSRNEVYTWGKGANGRL 589
T N ++ WG G NGRL
Sbjct: 683 AATDDNHIFAWGNGGNGRL 701
Score = 264 (98.0 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 99/350 (28%), Positives = 149/350 (42%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM-TSVDFVTCGEFHTCAVTMA 353
A + +R EV+ WG GG+ P L+ + S V G H VT+
Sbjct: 359 AVVTSRTSEVYVWG---GGKS---------TPQKLDVIKSGCSARQVCAGNTHFAVVTVE 406
Query: 354 GELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQ 410
ELYTW + GT G LGHG S+ PK + L+G + V+CG T +T GQ
Sbjct: 407 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDEGQ 465
Query: 411 LFTFGDGTFGVLGHGDR---KNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
L+ FG +G +G D+ V P ++ S V+CG H V++T++
Sbjct: 466 LYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHV-----VVLTRNK- 518
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
++++WG G+ RLG +E P V V CG T LT SG V
Sbjct: 519 -----EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVL 573
Query: 528 TMGSTVYGQLG---------NPNADGKLPCLVEDKLAGE----SVEEIACGAYHVAVLTS 574
G + +LG N A ++P LA + + +A G H A +
Sbjct: 574 ACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDE 633
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEA-LKDRHVKYIACGSNYSAA 623
R + T+G G+LG G+ + R L+ L + V ++CG ++ A
Sbjct: 634 RGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 683
Score = 241 (89.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 82/332 (24%), Positives = 147/332 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VGKDI 323
G +A P+ +E + ++CG VT +G+++ +G + G +G G ++
Sbjct: 428 GDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEV 487
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
++P L + V+ V+CG+ H +T E+Y+WG G + G LG ++ ++ P+++
Sbjct: 488 LEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTPQKV 545
Query: 384 SGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF----------GVLGHGDRKNVSYP 433
P + L + +V CG T L+T +G++ G F G++ H V Y
Sbjct: 546 DVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYT 604
Query: 434 RE---VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
+ LS + VA G HTAA+ E G+L T+G +LG G+
Sbjct: 605 TSFTLAKQLSFYKIRTVAPGKTHTAAIDE-----------RGRLLTFGCNKCGQLGVGNY 653
Query: 491 EPRLKPTCVPA-LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNA--DGKL 546
+ RL + L +V+CG T+ T H+F G+ G+L P G
Sbjct: 654 KKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSD 713
Query: 547 PCLVEDK-LAGE--SVEEIACGAYHVAVLTSR 575
C + + G V +++C +H ++ +
Sbjct: 714 ICTSWPRPIFGSLHHVPDLSCRGWHTILIVEK 745
Score = 223 (83.6 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 75/244 (30%), Positives = 114/244 (46%)
Query: 383 ISGPLEGLQVASVTCGPWHTALITS-TGQLFTFGDGTFGVLGHGDRKNVSYPREVESL-S 440
++ P + + ++VT P A++TS T +++ +G G S P++++ + S
Sbjct: 341 LNAPTKRPRSSTVTETP--IAVVTSRTSEVYVWGGGK------------STPQKLDVIKS 386
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD---GDK--NRLGHGDKEPRLK 495
G V G H A +VT +L+TW + G K +LGHGDK +
Sbjct: 387 GCSARQVCAGNTHFA-----VVTVEK------ELYTWVNMQGGTKLHGQLGHGDKASYRQ 435
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK--LPCLVEDK 553
P V L +V+CG TV +T G ++ GS YG +G G L + +
Sbjct: 436 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 495
Query: 554 LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKY 613
+ VE+++CG HV VLT EVY+WG G GRLG ED TP V+ K +
Sbjct: 496 FSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVA 555
Query: 614 IACG 617
+ CG
Sbjct: 556 VQCG 559
Score = 150 (57.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 48/154 (31%), Positives = 70/154 (45%)
Query: 328 LLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
L + L+ + V G+ HT A+ G L T+G + G LG G + GPL
Sbjct: 609 LAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPL 666
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG-------HGDRKNVSYPREVESLS 440
G QV V+CG T T +F +G+G G L HG S+PR +
Sbjct: 667 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPI--FG 724
Query: 441 GLRTIA-VACGVWHTAAVVE-VIVTQSSASVSSG 472
L + ++C WHT +VE V+ +++ S SSG
Sbjct: 725 SLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSG 758
Score = 139 (54.0 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 55/195 (28%), Positives = 82/195 (42%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
+VY WG C + G D +Y T V +P+ L +++ V CG L+T+
Sbjct: 519 EVYSWG---CGEYGRLGLDSEEDYY-TPQKVDVPKAL---IIVAVQ---CGCDGTFLLTQ 568
Query: 301 QGEVFTWGEESGGRLG-HGVGKDIVQ-------PH-----LLESLTMTSVDFVTCGEFHT 347
G+V G +LG + I+ P+ L + L+ + V G+ HT
Sbjct: 569 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHT 628
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
A+ G L T+G + G LG G + GPL G QV V+CG T T
Sbjct: 629 AAIDERGRLLTFG--CNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 686
Query: 408 TGQLFTFGDGTFGVL 422
+F +G+G G L
Sbjct: 687 DNHIFAWGNGGNGRL 701
Score = 38 (18.4 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1018 GTRPRSPALSVSSHQVEAEWIE 1039
GT +PA + S+ QVE E ++
Sbjct: 907 GTPLTTPACACSALQVEVERLQ 928
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 252 (93.8 bits), Expect = 9.2e-19, P = 9.2e-19
Identities = 94/346 (27%), Positives = 155/346 (44%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC--GEFH 346
+C V H + T G V T G+ G+LG +G+++++ +L D V G H
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLG--LGENVME-RKKPALVSIPEDVVQAEAGGMH 95
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTAL 404
T ++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA
Sbjct: 96 TVCLSKSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAA 150
Query: 405 ITSTGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
+T G++F +G GV+G + K P +V+ + + VA G H +
Sbjct: 151 LTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADG 208
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI-----DYNFHKVACGHSL 516
+ G+L + NR G E L P CV F CG
Sbjct: 209 DLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYF 268
Query: 517 TVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPC-LVEDKLAGESVEEIACGAYHVAVLTS 574
T ++ GHV+ G + Y QLG P + +P L K + +S + G +H + S
Sbjct: 269 TFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDS 328
Query: 575 RNEVYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSN 619
+ Y+ G+ GRLG G+ E++ P L+ L V +ACG++
Sbjct: 329 EGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPA--VSSVACGAS 372
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 79/320 (24%), Positives = 142/320 (44%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG +V+ +P ++ DV G H +++ G+V+++G G LG
Sbjct: 61 DVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 120
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 121 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMK 177
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--KNVSYP 433
+P ++ + ++VAS G H ++T+ G L+T G G G LG N
Sbjct: 178 KSMVPVQVQLDVPVVKVAS---GNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGR 234
Query: 434 REVESLSGLRTIAVAC-GV-WHTAAVVEVIVTQSSASVS-SGKLFTWGDGDKNRLGHGDK 490
+ +E L + + + G H + ++S G ++ +G + ++LG
Sbjct: 235 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGT 294
Query: 491 EPRLKPTCVPALIDYNFHKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGK-L 546
E P + + + V G TV + + G +++G YG+LG A+ K +
Sbjct: 295 ESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSI 354
Query: 547 PCLVEDKLAGESVEEIACGA 566
P L+ +L +V +ACGA
Sbjct: 355 PTLIS-RLP--AVSSVACGA 371
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 78/305 (25%), Positives = 120/305 (39%)
Query: 341 TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGLQVASVTCGP 399
+C H T G + T G G + G LG G +V P +S P + +Q + G
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQG--DVGQLGLGENVMERKKPALVSIPEDVVQAEA---GG 93
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVS--YPREVESLSGLRTIAVACGVWHTAAV 457
HT ++ +GQ+++FG G LG S P +VE + + V+ G HTAA+
Sbjct: 94 MHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSAGDSHTAAL 151
Query: 458 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLT 517
+ V F +G L K + P V +D KVA G+
Sbjct: 152 TD------DGRVFLWGSFRDNNGVIGLLEPMKKS--MVP--VQVQLDVPVVKVASGNDHL 201
Query: 518 VGLTTSGHVFTMGSTVYGQLGN-P----NADGK-------LPCLVEDKLAGES----VEE 561
V LT G ++T+G GQLG P N G+ +P V K G ++
Sbjct: 202 VMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQD 261
Query: 562 IACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
CGAY ++ VY +G +LG E P + + K+ ++
Sbjct: 262 AFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH 321
Query: 622 AAICL 626
+C+
Sbjct: 322 HTVCM 326
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 75/298 (25%), Positives = 120/298 (40%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY +G C++ G D +V G+ ++P +E V ++ G H A +T
Sbjct: 103 GQVYSFG---CNDEGALGRDTSVE--GSE---MVPGKVELQE--KVVQVSAGDSHTAALT 152
Query: 300 RQGEVFTWGE--ESGGRLG--HGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
G VF WG ++ G +G + K +V + L + V V G H +T G+
Sbjct: 153 DDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDVPVVK-VASGNDHLVMLTADGD 209
Query: 356 LYTWGDGTHNAGLLGHGTDVSH-----------WIPKRISGPLEG----LQVASVTCGPW 400
LYT G G G LG ++ +PK + G ++ CG +
Sbjct: 210 LYTLGCGEQ--GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY 267
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL--SGLRTIAVACGVWHTAAVV 458
T I+ G ++ FG + LG ++ P+ + S S + + G HT +
Sbjct: 268 FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMD 327
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKVACGHS 515
S GK ++ G + RLG G+ E + PT + L + VACG S
Sbjct: 328 -----------SEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVS--SVACGAS 372
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 156 (60.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 51/182 (28%), Positives = 81/182 (44%)
Query: 266 GTRADVLLPRPLES-NVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRL-GHGVGKDI 323
G VL P PL++ DV ++ + ALVTR+ G R+ G +
Sbjct: 24 GRGRQVLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPPAL-LRPGPRVPGAKAPQPA 82
Query: 324 VQPHLLESLTMT-SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKR 382
++P +L + G H + AG++++WG G H G LGHG+ + P+
Sbjct: 83 LRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGRH--GQLGHGSLEAEPEPRL 140
Query: 383 ISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRK----NVSYPREVES 438
+ L+GL VA V G WH+ ++ TG ++ +G G L R + PRE
Sbjct: 141 LEA-LQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASG 199
Query: 439 LS 440
L+
Sbjct: 200 LN 201
Score = 151 (58.2 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 41/128 (32%), Positives = 61/128 (47%)
Query: 274 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT 333
PR L L + G HA L+ G+VF+WG+ G+LGHG + +P LLE+L
Sbjct: 88 PRALAPE--LRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQ 145
Query: 334 MTSVDFVTCGEFHTCAVTMAGELYTWG-DGTHNAGLLGHG-TDVSHWIPKRISGPLE-GL 390
V V G +H+ V+ G++Y WG + + L + + IP+ SG E G
Sbjct: 146 GLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGF 205
Query: 391 QVASVTCG 398
+V G
Sbjct: 206 EVRRTAKG 213
Score = 150 (57.9 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P + PL G V +CG HTA++T TG+L+T+G G +G LGH D ++ P VE
Sbjct: 228 PALLDLPL-GADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYF 286
Query: 440 --SGLRTIAVACGVWHT 454
L+ AV+CG W+T
Sbjct: 287 VDKQLQVRAVSCGPWNT 303
Score = 144 (55.7 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 38/104 (36%), Positives = 52/104 (50%)
Query: 519 GLTTSGHVFTMGSTVYGQLGNPN---ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSR 575
GL G F + T G+ G P A P L++ L G V + +CG+ H AV+T
Sbjct: 199 GLNEDG--FEVRRTAKGEDGAPAPFIAIQPFPALLDLPL-GADVVKASCGSRHTAVVTGT 255
Query: 576 NEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH--VKYIACG 617
E+YTWG G G+LGH D P VE D+ V+ ++CG
Sbjct: 256 GELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCG 299
Score = 138 (53.6 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 34/78 (43%), Positives = 43/78 (55%)
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG 385
P LL+ V +CG HT VT GELYTWG G + G LGH S P R+
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKY--GQLGHKDTTSLDRPCRVEY 285
Query: 386 PLEG-LQVASVTCGPWHT 402
++ LQV +V+CGPW+T
Sbjct: 286 FVDKQLQVRAVSCGPWNT 303
Score = 131 (51.2 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 31/96 (32%), Positives = 46/96 (47%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L+ + G H L+ GQ+F++G G G LGHG + PR +E+L GL VA
Sbjct: 95 LRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAA 154
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
G WH+ V E +G ++ WG + +L
Sbjct: 155 GGWHSVCVSE-----------TGDIYIWGWNESGQL 179
Score = 126 (49.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 540 PNADGKLPCL---VEDKLAGE-SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE 595
P A P L LA E + GA H +L +V++WG+G +G+LGHG +E
Sbjct: 74 PGAKAPQPALRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLE 133
Query: 596 DRKTPALVEALKDRHVKYIACGSNYSAAI 624
P L+EAL+ V +A G +S +
Sbjct: 134 AEPEPRLLEALQGLPVAEVAAGGWHSVCV 162
Score = 91 (37.1 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 500 PALIDY----NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKL 554
PAL+D + K +CG T +T +G ++T G YGQLG+ + PC VE +
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 287
Query: 555 AGE-SVEEIACGAYHVAVLTSRNE 577
+ V ++CG ++ V E
Sbjct: 288 DKQLQVRAVSCGPWNTYVYAVEKE 311
Score = 82 (33.9 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 25/84 (29%), Positives = 38/84 (45%)
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
+P ++ G + +CG HTA +VT +G+L+TWG G +LGH D
Sbjct: 227 FPALLDLPLGADVVKASCGSRHTA-----VVT------GTGELYTWGWGKYGQLGHKDTT 275
Query: 492 PRLKPTCVPALIDYNFH--KVACG 513
+P V +D V+CG
Sbjct: 276 SLDRPCRVEYFVDKQLQVRAVSCG 299
Score = 74 (31.1 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
D G V+ WG+ G + + A+ PR LE+ L V +A G H+
Sbjct: 111 DEAGQVFSWGQ---------GRHGQLGHGSLEAEPE-PRLLEALQGLPVAEVAAGGWHSV 160
Query: 297 LVTRQGEVFTWGEESGGRL 315
V+ G+++ WG G+L
Sbjct: 161 CVSETGDIYIWGWNESGQL 179
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 112 AEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNS 153
AEV G ++ S + G I GWN+ G SR L ++
Sbjct: 150 AEVAAGGWHSVCVS-ETGDIYIWGWNESGQLALPSRSLAEDT 190
Score = 39 (18.8 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 206 MQVKGSGSDVFRV 218
+Q GSG+DV RV
Sbjct: 35 LQTPGSGADVRRV 47
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 251 (93.4 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 96/348 (27%), Positives = 158/348 (45%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC--GEFHTCA 349
V H + T G V T G+ G+LG +G+++++ +L D V G HT
Sbjct: 25 VSHRSHGTEPGVVLTLGQGDVGQLG--LGENVME-RKKPALVSIPEDIVQAEAGGMHTVC 81
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 82 LSKSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVD--LQE-KVIQVSAGDSHTAALTE 136
Query: 408 TGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
G++F +G GV+G + K P +V+ LS + + VA G H +
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LS-VPVVKVASGNDHLVMLTVDGDLY 194
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI-----DYNFHKVACGHSLTVG 519
+ S G+L + NR G E L P CV F CG T
Sbjct: 195 TLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGK-LPC-LVEDKLAGESVEEIACGAYHVAVLTSRNE 577
+++ GHV+ G + Y QLG + +P L K + +S + G +H + S +
Sbjct: 255 ISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGK 314
Query: 578 VYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
Y+ G+ GRLG G+ E++ P L+ L V +ACG++ A+
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPT--VSSVACGASVGYAV 360
Score = 234 (87.4 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 94/384 (24%), Positives = 171/384 (44%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG +V+ +P ++ D+ G H +++ G+V+++G G LG
Sbjct: 44 DVGQLGLGENVMERKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P ++ V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVD--LQEKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--KNVSYP 433
+P ++ + ++VAS G H ++T G L+T G G G LG N
Sbjct: 161 KSMVPVQVQLSVPVVKVAS---GNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGR 217
Query: 434 REVESLSGLRTIAVAC--GVWHTAAVVEVIVTQSSASVSS-GKLFTWGDGDKNRLGHGDK 490
+ +E L + + + H + ++SS G ++ +G + ++LG
Sbjct: 218 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGT 277
Query: 491 EPRLKPTCVPALIDYNFHKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGK-L 546
E P + + + V G TV + + G +++G YG+LG A+ K +
Sbjct: 278 ESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSV 337
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV--E 604
P L+ +L +V +ACGA +T V+ WG G N +LG G ED +P + +
Sbjct: 338 PTLIP-RLP--TVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGK 394
Query: 605 ALKDRHVKYIACGSNYSAAICLHK 628
L++R V ++ G ++ + K
Sbjct: 395 QLENRVVLTVSSGGQHTVLLVKDK 418
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 63/221 (28%), Positives = 93/221 (42%)
Query: 380 PKRIS---GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
PKRI+ P E S H + T G + T G G G LG G+ NV ++
Sbjct: 3 PKRIAKRRSPPEDALPKSKKVKVSHRSHGTEPGVVLTLGQGDVGQLGLGE--NVMERKKP 60
Query: 437 ESLSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK 495
+S I A G HT + + SG+++++G D+ LG +
Sbjct: 61 ALVSIPEDIVQAEAGGMHTVCLSK-----------SGQVYSFGCNDEGALGRDTSVEGSE 109
Query: 496 PTCVPALIDYNFH--KVACGHSLTVGLTTSGHVFTMGS--TVYGQLG--NPNADGKLPCL 549
VP +D +V+ G S T LT G VF GS G +G P +P
Sbjct: 110 --MVPGKVDLQEKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQ 167
Query: 550 VEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
V+ + V ++A G H+ +LT ++YT G G G+LG
Sbjct: 168 VQLSVP---VVKVASGNDHLVMLTVDGDLYTLGSGEQGQLG 205
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 252 (93.8 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 96/380 (25%), Positives = 167/380 (43%)
Query: 249 ICDNVVKAGADKNVNYLGTRADVLLPRPLESNV-VLDVHHIACGVRHAALVTRQGEVFTW 307
+ NV+ G + +V LG D+L + L + D I+ G H ++T+ G+++++
Sbjct: 40 VLGNVLVCG-NGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSF 98
Query: 308 GEESGGRLGHGVGKDIVQ--PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN 365
G G LG +D + P L++ L ++ ++ G+ H+ + G ++ WG +
Sbjct: 99 GCNDEGALGRDTSEDGSESKPDLID-LPGKAL-CISAGDSHSACLLEDGRVFAWGSFRDS 156
Query: 366 AGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 425
G +G D + P + +EG S+ G H ++T+ G++FT G G LG
Sbjct: 157 HGNMGLTIDGNKRTPIDL---MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 426 DRKNVSYPREVESLSGLRTIAVACGVWHTAAV-VEVIVTQSSASV--SSGKLFTWGDGDK 482
+++S E G R + + T A E I + + S W G
Sbjct: 214 SERSISG----EGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLN 269
Query: 483 N--RLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP 540
N +L H K T + + + +A G TV LTT +G YG+LG
Sbjct: 270 NFKQLAHETKGKEFALTPIKTELK-DIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLG 328
Query: 541 NADGKL--PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRK 598
+ + P +V+ KL E + + CG +T ++Y+WG G N +LG GD +D
Sbjct: 329 DVKDVVEKPTIVK-KLT-EKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDEL 386
Query: 599 TPALVEALKDRHVKYIACGS 618
P +V + K+ K++ S
Sbjct: 387 EPIVVVS-KNTQGKHMLLAS 405
Score = 197 (74.4 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 84/342 (24%), Positives = 148/342 (43%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESLT--MTSVDFVTCGEFHTCAVTMAGELYTW 359
G V G G+LG +G+DI++ L + +VD ++ G H +T +G++Y++
Sbjct: 42 GNVLVCGNGDVGQLG--LGEDILERKRLSPVAGIPDAVD-ISAGGMHNLVLTKSGDIYSF 98
Query: 360 GDGTHNAGLLGHGT--DVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD- 416
G ++ G LG T D S P I P + L ++ G H+A + G++F +G
Sbjct: 99 G--CNDEGALGRDTSEDGSESKPDLIDLPGKAL---CISAGDSHSACLLEDGRVFAWGSF 153
Query: 417 -GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
+ G +G N P ++ + G ++A G H + + G+L
Sbjct: 154 RDSHGNMGLTIDGNKRTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLG 211
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV-ACGHSLTVGLTTSGHVFTMGSTVY 534
+ + G K L+PT + F + A + + + + ++ G +
Sbjct: 212 RLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNF 271
Query: 535 GQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDV 594
QL + GK L K + + IA G +H +LT+ + G+ GRLG GDV
Sbjct: 272 KQLAH-ETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDV 330
Query: 595 EDR-KTPALVEALKDRHVKYIACGSNYSAAIC----LHKWVS 631
+D + P +V+ L ++ V + CG S A+ L+ W S
Sbjct: 331 KDVVEKPTIVKKLTEKIVS-VGCGEVCSYAVTIDGKLYSWGS 371
Score = 126 (49.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 52/191 (27%), Positives = 86/191 (45%)
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLR-TIAVACGVWHTAAVVEVIVTQ 464
T G + G+G G LG G+ ++ + + ++G+ + ++ G H +++T+
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGE--DILERKRLSPVAGIPDAVDISAGGMHN-----LVLTK 91
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC---GHSLTVGLT 521
S G ++++G D+ LG E + P LID K C G S + L
Sbjct: 92 S------GDIYSFGCNDEGALGRDTSEDGSESK--PDLIDLP-GKALCISAGDSHSACLL 142
Query: 522 TSGHVFTMGS--TVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVY 579
G VF GS +G +G DG + D + G IA GA H+ +LT+ +V+
Sbjct: 143 EDGRVFAWGSFRDSHGNMGL-TIDGNKRTPI-DLMEGTVCCSIASGADHLVILTTAGKVF 200
Query: 580 TWGKGANGRLG 590
T G G+LG
Sbjct: 201 TVGCAEQGQLG 211
Score = 49 (22.3 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 1002 ESSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEP 1043
+ E KE++P + S + + ++P ++ +VE E ++ P
Sbjct: 491 DKQEQKENLPAKASTSSKKIKTPPQDDAAEEVEEESAQEPTP 532
Score = 39 (18.8 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 1002 ESSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYE 1042
+ E KE++P + S + + ++P + EAE +++ E
Sbjct: 456 DKQEQKENLPAKASTSSKKNKTPPQDNADK--EAENVDKQE 494
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 249 (92.7 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 97/349 (27%), Positives = 156/349 (44%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ---PHLLESLTMTSVDFVTCGEFHTC 348
V H + T G V T G+ G+LG +G+ +++ P L+ L V G HT
Sbjct: 25 VSHRSHKTEPGLVLTLGQGDVGQLG--LGESVLERKKPALVPLLQ--DVVQAEAGGMHTV 80
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
+ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 81 CLNQSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALT 135
Query: 407 STGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
G++F +G GV+G + K P +V+ + + VA G H +
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHLVMLTTDGDL 193
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV-----PALIDYNFHKVACGHSLTV 518
+ G+L + NR G E L P CV + F CG LT
Sbjct: 194 YTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTF 253
Query: 519 GLTTSGHVFTMGSTVYGQLGNPN-ADGKLPC-LVEDKLAGESVEEIACGAYHVAVLTSRN 576
++ GHV+ G + Y QLG P A +P L K + +S + G +H + S
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEG 313
Query: 577 EVYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ Y+ G+ GRLG G+ E++ P L+ L V +ACG++ A+
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV--VSSVACGASVGYAV 360
Score = 219 (82.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 93/384 (24%), Positives = 168/384 (43%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG VL +P ++ DV G H + + G+V+++G G LG
Sbjct: 44 DVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--KNVSYP 433
+P ++ + ++VAS G H ++T+ G L+T G G G LG N
Sbjct: 161 KSMVPVQVQLDMPVVKVAS---GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 434 REVESLSGLRTIAVAC-GVWHTAAVVEVIV-TQSSASVS-SGKLFTWGDGDKNRLGHGDK 490
+ +E L + + + G + + ++S G ++ +G + ++LG
Sbjct: 218 QGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGT 277
Query: 491 EPRLKPTCVPALIDYNFHKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGK-L 546
P + + + V G T+ + + G +++G YG+LG A+ K +
Sbjct: 278 ASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSI 337
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV--E 604
P L+ +L V +ACGA ++ V+ WG G N +LG G ED +P + +
Sbjct: 338 PTLIS-RLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGK 394
Query: 605 ALKDRHVKYIACGSNYSAAICLHK 628
L++R V ++ G ++ + K
Sbjct: 395 QLENRVVLTVSSGGQHTVLLVKDK 418
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 52/168 (30%), Positives = 79/168 (47%)
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKPTCVPALIDYNFHKVACGHSLT 517
+V V+ S G + T G GD +LG G+ R KP VP L D + G T
Sbjct: 22 KVKVSHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVV--QAEAGGMHT 79
Query: 518 VGLTTSGHVFTMGSTVYGQLG-NPNADGK--LPCLVEDKLAGESVEEIACGAYHVAVLTS 574
V L SG V++ G G LG + + +G +P VE + E V +++ G H A LT
Sbjct: 80 VCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ---EKVVQVSAGDSHTAALTE 136
Query: 575 RNEVYTWG--KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
V+ WG + NG +G + +K+ V+ D V +A G+++
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPM-KKSMVPVQVQLDMPVVKVASGNDH 183
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 62/221 (28%), Positives = 96/221 (43%)
Query: 380 PKRIS---GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
PKRI+ P E S H + T G + T G G G LG G+ +V ++
Sbjct: 3 PKRIAKRRSPPEDAIPKSKKVKVSHRSHKTEPGLVLTLGQGDVGQLGLGE--SVLERKKP 60
Query: 437 ESLSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK 495
+ L+ + A G HT V + QS G+++++G D+ LG +
Sbjct: 61 ALVPLLQDVVQAEAGGMHT-----VCLNQS------GQVYSFGCNDEGALGRDTSVEGSE 109
Query: 496 PTCVPALIDYNFH--KVACGHSLTVGLTTSGHVFTMGS--TVYGQLG--NPNADGKLPCL 549
VP ++ +V+ G S T LT G VF GS G +G P +P
Sbjct: 110 --MVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQ 167
Query: 550 VEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
V+ + V ++A G H+ +LT+ ++YT G G G+LG
Sbjct: 168 VQLDMP---VVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 248 (92.4 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 94/348 (27%), Positives = 155/348 (44%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC--GEFHTCA 349
V H + T G V T G+ G+LG +G+++++ +L D V G HT
Sbjct: 25 VSHRSHSTEPGLVLTLGQGDVGQLG--LGENVME-RKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 82 LSKSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTD 136
Query: 408 TGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
G++F +G GV+G + K P +V+ + + VA G H +
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLY 194
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI-----DYNFHKVACGHSLTVG 519
+ G+L + NR G E L P CV F CG T
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGK-LPC-LVEDKLAGESVEEIACGAYHVAVLTSRNE 577
++ GHV+ G + Y QLG P + +P L K + +S + G +H + S +
Sbjct: 255 ISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGK 314
Query: 578 VYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
Y+ G+ GRLG G+ E++ P L+ L V +ACG++ A+
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSIPTLISRLPA--VSSVACGASVGYAV 360
Score = 235 (87.8 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 95/384 (24%), Positives = 171/384 (44%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG +V+ +P ++ DV G H +++ G+V+++G G LG
Sbjct: 44 DVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--KNVSYP 433
+P ++ + ++VAS G H ++T+ G L+T G G G LG N
Sbjct: 161 KSMVPVQVQLDVPVVKVAS---GNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 434 REVESLSGLRTIAVAC--GVWHTAAVVEVIVTQSSASVS-SGKLFTWGDGDKNRLGHGDK 490
+ +E L + + + H + ++S G ++ +G + ++LG
Sbjct: 218 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGT 277
Query: 491 EPRLKPTCVPALIDYNFHKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGK-L 546
E P + + + V G TV + + G +++G YG+LG A+ K +
Sbjct: 278 ESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSI 337
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA--LVE 604
P L+ +L +V +ACGA +T V+ WG G N +LG G ED +P + +
Sbjct: 338 PTLIS-RLP--AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGK 394
Query: 605 ALKDRHVKYIACGSNYSAAICLHK 628
L++R V ++ G ++ + K
Sbjct: 395 QLENRVVLSVSSGGQHTVLLVKDK 418
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/168 (30%), Positives = 80/168 (47%)
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKPTCVPALIDYNFHKVACGHSLT 517
+V V+ S S G + T G GD +LG G+ R KP V I + + G T
Sbjct: 22 KVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHT 79
Query: 518 VGLTTSGHVFTMGSTVYGQLG-NPNADGK--LPCLVEDKLAGESVEEIACGAYHVAVLTS 574
V L+ SG V++ G G LG + + +G +P VE + E V +++ G H A LT
Sbjct: 80 VCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ---EKVVQVSAGDSHTAALTD 136
Query: 575 RNEVYTWG--KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
V+ WG + NG +G + +K+ V+ D V +A G+++
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPM-KKSMVPVQVQLDVPVVKVASGNDH 183
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 60/219 (27%), Positives = 94/219 (42%)
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
I KR S P + + S H + T G + T G G G LG G+ NV ++
Sbjct: 6 IAKRRSPPADAIP-KSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGE--NVMERKKPAL 62
Query: 439 LSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
+S + A G HT + + SG+++++G D+ LG +
Sbjct: 63 VSIPEDVVQAEAGGMHTVCLSK-----------SGQVYSFGCNDEGALGRDTSVEGSE-- 109
Query: 498 CVPALIDYNFH--KVACGHSLTVGLTTSGHVFTMGS--TVYGQLG--NPNADGKLPCLVE 551
VP ++ +V+ G S T LT G VF GS G +G P +P V+
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+ V ++A G H+ +LT+ ++YT G G G+LG
Sbjct: 170 LDVP---VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 272 (100.8 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 91/330 (27%), Positives = 136/330 (41%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
V H+A G H + G ++ G G+LG G G + P + T V G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWKT----VAAGT 89
Query: 345 FHTCAVTMAGELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH 401
H+ + G L+ WG G L+ + + P RI G +V+ G
Sbjct: 90 THSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIG---TGNDWVAVSAGELT 146
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV--ESLSGLRTIAVACGVWHTAAVVE 459
+ + G L+++G+ FG LG G + P +V + LS R +AVA G H A+
Sbjct: 147 SFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQ- 205
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVG 519
+ G L+ WG +LG G PT + D ++ ++ G +V
Sbjct: 206 ----------ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVA 255
Query: 520 LTTSGHVFTMGSTVYGQLGN----PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSR 575
L G +++ G ++G+LGN P A+ P V G IA GA H L
Sbjct: 256 LKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVG---TGSDWVAIAAGALHTVALHRN 312
Query: 576 NEVYTWGKGANGRLGHGDVEDRKTPALVEA 605
V WG A G +G G V +R TP L+ A
Sbjct: 313 GTVSAWGNNAQGAVGDGTVANRSTPTLIVA 342
Score = 253 (94.1 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 109/402 (27%), Positives = 161/402 (40%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V WG +N A D V T ++ P L +NV IA G + V
Sbjct: 313 GTVSAWG----NNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA-----IAAGTGVSFSVL 363
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G VF WG G+LG+G + P +L + + G F + + G L+ W
Sbjct: 364 ANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAF-SLGLRSNGTLWAW 422
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G +G LG GT IP + G + + G H+ + + G L+ +GD +
Sbjct: 423 GGNA--SGQLGDGTTTPSAIPVPVVGGAGNWRTTAT--GTAHSVAVRADGTLWAWGDNSS 478
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LG G S P+++ + A A W TA V S + G L++WGD
Sbjct: 479 GQLGIGSTVAASTPQQIT----VTNPASAGNDW-TA--VAGGGAHSLGLKADGTLWSWGD 531
Query: 480 GDKNRLGHGD-KEPRLKPTCV----PALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVY 534
+LG G R P + P D N+ VA G ++ L G ++T G
Sbjct: 532 NTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSL 591
Query: 535 GQLG-NP---------NADGKLPCLVEDKLA-GESVEEIACGAYHVAVLTSRNEVYTWGK 583
QLG +P N +L A S IA G H L + ++ WG
Sbjct: 592 LQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGA 651
Query: 584 GANGRLGHGDVEDRKTPALVEALKDRHVKYI--ACGSNYSAA 623
+ G+LG+G TP V+ + V Y+ A G+++S A
Sbjct: 652 NSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGTSHSLA 691
Score = 237 (88.5 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 90/348 (25%), Positives = 149/348 (42%)
Query: 265 LGTRADVLLPRPLESNVVLDVHH------IACGVRHAALVTRQGEVFTWGEESGGRLGHG 318
LG V P+P++ VV D +A G HA + G ++ WG G+LG G
Sbjct: 167 LGDGTTVSRPQPVQ--VVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTG 224
Query: 319 VGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-- 375
G I+ P L+ T ++ GE H+ A+ G L++WG G LG+G +
Sbjct: 225 -GTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLF--GELGNGVALPG 281
Query: 376 -SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
+ P R+ G ++ G HT + G + +G+ G +G G N S P
Sbjct: 282 ANVTTPTRVG---TGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPT 338
Query: 435 EVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
+ + ++ + +A+A G T V+ ++G +F WG +LG+G
Sbjct: 339 LIVAPVTLVNNVAIAAG---TGVSFSVL--------ANGTVFGWGGNGAGQLGNGTFGAV 387
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVED 552
PT + A + V G + ++GL ++G ++ G GQLG+ +P V
Sbjct: 388 TAPTVLSAGASA-WLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVG 446
Query: 553 KLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP 600
AG + A G H + + ++ WG ++G+LG G TP
Sbjct: 447 G-AG-NWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTP 492
Score = 198 (74.8 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 84/309 (27%), Positives = 129/309 (41%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGD 361
G ++ WG + G+LG G P + T G H+ AV G L+ WGD
Sbjct: 417 GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTAT-GTAHSVAVRADGTLWAWGD 475
Query: 362 GTHNAGLLGHGTDVSHWIPKRIS--GPLE-GLQVASVTCGPWHTALITSTGQLFTFGDGT 418
+++G LG G+ V+ P++I+ P G +V G H+ + + G L+++GD T
Sbjct: 476 --NSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNT 533
Query: 419 FGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
FG LG G N + P V+ ++G W A V S A + G ++TW
Sbjct: 534 FGQLGDGTGTSNRTTP--VQIVTG--NPGNFDRNWVAVAAGGVF---SLALQADGTIWTW 586
Query: 478 GDGDKNRLGHGDKEPR-LKPTC---VPALID--------YN--FHKVACGHSLTVGLTTS 523
GD +LG +P L P VPA + +N + +A G + L
Sbjct: 587 GDNSLLQLG---TDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQAD 643
Query: 524 GHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGK 583
G ++ G+ GQLGN + G +A G H S ++ WG
Sbjct: 644 GTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGN 703
Query: 584 GANGRLGHG 592
+G+LG G
Sbjct: 704 NTSGQLGTG 712
Score = 166 (63.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 59/212 (27%), Positives = 93/212 (43%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTR----ADVLLPRPLESNVVLDVHHIACGVRHA 295
G ++ WG+ +++++ G D + T+ A + + P + IA G H
Sbjct: 581 GTIWTWGD---NSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHG 637
Query: 296 ALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVT--CGEFHTCAVTMA 353
+ G ++ WG S G+LG+GV P ++ + V +V+ G H+ A
Sbjct: 638 LSLQADGTLWAWGANSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGTSHSLAGRSD 695
Query: 354 GELYTWGDGTHNAGLLG---HGTDVS------HWIPKRI--SGPLEGLQVASV-TCGPWH 401
G L+ WG+ T +G LG H D H +P RI S P+ V T G H
Sbjct: 696 GTLWAWGNNT--SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSH 753
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
+A + S G L+T+G T G LG+G P
Sbjct: 754 SAALKSNGTLWTWGQNTSGQLGNGTTTEADIP 785
Score = 162 (62.1 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 63/248 (25%), Positives = 97/248 (39%)
Query: 383 ISGPLEGLQ-VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSG 441
+ P G V V G H + S G L+ G FG LG G N + P +V
Sbjct: 24 LGAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVP---- 79
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV-P 500
G W T A T S + G L+ WG +LG +L P
Sbjct: 80 --------GTWKTVAAG---TTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSP 128
Query: 501 ALIDY--NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPC-LVEDKLAG 556
I ++ V+ G + GL G +++ G+ ++G+LG+ + P +V D L+
Sbjct: 129 IRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN 188
Query: 557 ESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIAC 616
+A G H L + ++ WG G+LG G P ++ DR I+
Sbjct: 189 GRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISA 248
Query: 617 GSNYSAAI 624
G +S A+
Sbjct: 249 GEMHSVAL 256
Score = 154 (59.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 72/285 (25%), Positives = 120/285 (42%)
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI----SGPLEGLQVASV 395
V G H+ + G L++WGD T G GT + P +I G + VA
Sbjct: 510 VAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTS-NRTTPVQIVTGNPGNFDRNWVAVA 568
Query: 396 TCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTA 455
G + AL + G ++T+GD + LG D ++ P ++ +A +
Sbjct: 569 AGGVFSLAL-QADGTIWTWGDNSLLQLGT-DPAMLT-PATQRNVPAQLAVASPPSTAFNS 625
Query: 456 AVVEVIVTQSSA-SVSS-GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACG 513
+ V + Q S+ + G L+ WG +LG+G P V + +A G
Sbjct: 626 SWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAG 685
Query: 514 HSLTVGLTTSGHVFTMGSTVYGQLG---NP-NADGKLP--------CLVEDKLAGESVEE 561
S ++ + G ++ G+ GQLG +P +AD P L + ++
Sbjct: 686 TSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWL 745
Query: 562 IA-CGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP-ALVE 604
+A G H A L S ++TWG+ +G+LG+G + P AL+E
Sbjct: 746 VATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLE 790
Score = 131 (51.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLG---HGVGKDIV--QPHLLESLTMTSV----- 337
+A G H+ G ++ WG + G+LG H D + QPH + + +TS
Sbjct: 682 LAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAA 741
Query: 338 -DFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
D++ T G H+ A+ G L+TWG T +G LG+GT IP + P + AS
Sbjct: 742 DDWLVATAGGSHSAALKSNGTLWTWGQNT--SGQLGNGTTTEADIPTALLEPRISVSPAS 799
Query: 395 VTCGP 399
+ GP
Sbjct: 800 LAFGP 804
Score = 55 (24.4 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 978 RDDQPVIRLPNGSVGVLANSSCVSE-SSEGKESMPLQDSENGTRPRSPALSVSSHQVEAE 1036
+ DQ +I L SV + A+S S G S+PL S+ T +P +++ V E
Sbjct: 962 QQDQSIIALFAASVTISASSGPGGIISPTGTVSLPLGGSQKFTITPNPGYAIAGVNV-IE 1020
Query: 1037 WIEQYE 1042
+EQ +
Sbjct: 1021 MVEQLD 1026
Score = 39 (18.8 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 905 PGVYDPENMRPAYIPNGLET-NGVHYSD 931
PG DP N +P +P + T N V +D
Sbjct: 715 PGDADPLNPQPHTVPARILTSNPVSAAD 742
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 272 (100.8 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 91/330 (27%), Positives = 136/330 (41%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
V H+A G H + G ++ G G+LG G G + P + T V G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWKT----VAAGT 89
Query: 345 FHTCAVTMAGELYTWGD---GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH 401
H+ + G L+ WG G L+ + + P RI G +V+ G
Sbjct: 90 THSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIG---TGNDWVAVSAGELT 146
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV--ESLSGLRTIAVACGVWHTAAVVE 459
+ + G L+++G+ FG LG G + P +V + LS R +AVA G H A+
Sbjct: 147 SFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQ- 205
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVG 519
+ G L+ WG +LG G PT + D ++ ++ G +V
Sbjct: 206 ----------ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVA 255
Query: 520 LTTSGHVFTMGSTVYGQLGN----PNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSR 575
L G +++ G ++G+LGN P A+ P V G IA GA H L
Sbjct: 256 LKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVG---TGSDWVAIAAGALHTVALHRN 312
Query: 576 NEVYTWGKGANGRLGHGDVEDRKTPALVEA 605
V WG A G +G G V +R TP L+ A
Sbjct: 313 GTVSAWGNNAQGAVGDGTVANRSTPTLIVA 342
Score = 253 (94.1 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 109/402 (27%), Positives = 161/402 (40%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V WG +N A D V T ++ P L +NV IA G + V
Sbjct: 313 GTVSAWG----NNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA-----IAAGTGVSFSVL 363
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTW 359
G VF WG G+LG+G + P +L + + G F + + G L+ W
Sbjct: 364 ANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAF-SLGLRSNGTLWAW 422
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G +G LG GT IP + G + + G H+ + + G L+ +GD +
Sbjct: 423 GGNA--SGQLGDGTTTPSAIPVPVVGGAGNWRTTAT--GTAHSVAVRADGTLWAWGDNSS 478
Query: 420 GVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
G LG G S P+++ + A A W TA V S + G L++WGD
Sbjct: 479 GQLGIGSTVAASTPQQIT----VTNPASAGNDW-TA--VAGGGAHSLGLKADGTLWSWGD 531
Query: 480 GDKNRLGHGD-KEPRLKPTCV----PALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVY 534
+LG G R P + P D N+ VA G ++ L G ++T G
Sbjct: 532 NTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSL 591
Query: 535 GQLG-NP---------NADGKLPCLVEDKLA-GESVEEIACGAYHVAVLTSRNEVYTWGK 583
QLG +P N +L A S IA G H L + ++ WG
Sbjct: 592 LQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGA 651
Query: 584 GANGRLGHGDVEDRKTPALVEALKDRHVKYI--ACGSNYSAA 623
+ G+LG+G TP V+ + V Y+ A G+++S A
Sbjct: 652 NSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGTSHSLA 691
Score = 237 (88.5 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 90/348 (25%), Positives = 149/348 (42%)
Query: 265 LGTRADVLLPRPLESNVVLDVHH------IACGVRHAALVTRQGEVFTWGEESGGRLGHG 318
LG V P+P++ VV D +A G HA + G ++ WG G+LG G
Sbjct: 167 LGDGTTVSRPQPVQ--VVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTG 224
Query: 319 VGKDIV-QPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDV-- 375
G I+ P L+ T ++ GE H+ A+ G L++WG G LG+G +
Sbjct: 225 -GTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLF--GELGNGVALPG 281
Query: 376 -SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR 434
+ P R+ G ++ G HT + G + +G+ G +G G N S P
Sbjct: 282 ANVTTPTRVG---TGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPT 338
Query: 435 EVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
+ + ++ + +A+A G T V+ ++G +F WG +LG+G
Sbjct: 339 LIVAPVTLVNNVAIAAG---TGVSFSVL--------ANGTVFGWGGNGAGQLGNGTFGAV 387
Query: 494 LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVED 552
PT + A + V G + ++GL ++G ++ G GQLG+ +P V
Sbjct: 388 TAPTVLSAGASA-WLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVG 446
Query: 553 KLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP 600
AG + A G H + + ++ WG ++G+LG G TP
Sbjct: 447 G-AG-NWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTP 492
Score = 198 (74.8 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 84/309 (27%), Positives = 129/309 (41%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGD 361
G ++ WG + G+LG G P + T G H+ AV G L+ WGD
Sbjct: 417 GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTAT-GTAHSVAVRADGTLWAWGD 475
Query: 362 GTHNAGLLGHGTDVSHWIPKRIS--GPLE-GLQVASVTCGPWHTALITSTGQLFTFGDGT 418
+++G LG G+ V+ P++I+ P G +V G H+ + + G L+++GD T
Sbjct: 476 --NSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNT 533
Query: 419 FGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
FG LG G N + P V+ ++G W A V S A + G ++TW
Sbjct: 534 FGQLGDGTGTSNRTTP--VQIVTG--NPGNFDRNWVAVAAGGVF---SLALQADGTIWTW 586
Query: 478 GDGDKNRLGHGDKEPR-LKPTC---VPALID--------YN--FHKVACGHSLTVGLTTS 523
GD +LG +P L P VPA + +N + +A G + L
Sbjct: 587 GDNSLLQLG---TDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQAD 643
Query: 524 GHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGK 583
G ++ G+ GQLGN + G +A G H S ++ WG
Sbjct: 644 GTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGN 703
Query: 584 GANGRLGHG 592
+G+LG G
Sbjct: 704 NTSGQLGTG 712
Score = 166 (63.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 59/212 (27%), Positives = 93/212 (43%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTR----ADVLLPRPLESNVVLDVHHIACGVRHA 295
G ++ WG+ +++++ G D + T+ A + + P + IA G H
Sbjct: 581 GTIWTWGD---NSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHG 637
Query: 296 ALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVT--CGEFHTCAVTMA 353
+ G ++ WG S G+LG+GV P ++ + V +V+ G H+ A
Sbjct: 638 LSLQADGTLWAWGANSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGTSHSLAGRSD 695
Query: 354 GELYTWGDGTHNAGLLG---HGTDVS------HWIPKRI--SGPLEGLQVASV-TCGPWH 401
G L+ WG+ T +G LG H D H +P RI S P+ V T G H
Sbjct: 696 GTLWAWGNNT--SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSH 753
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
+A + S G L+T+G T G LG+G P
Sbjct: 754 SAALKSNGTLWTWGQNTSGQLGNGTTTEADIP 785
Score = 162 (62.1 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 63/248 (25%), Positives = 97/248 (39%)
Query: 383 ISGPLEGLQ-VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSG 441
+ P G V V G H + S G L+ G FG LG G N + P +V
Sbjct: 24 LGAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVP---- 79
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV-P 500
G W T A T S + G L+ WG +LG +L P
Sbjct: 80 --------GTWKTVAAG---TTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSP 128
Query: 501 ALIDY--NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPC-LVEDKLAG 556
I ++ V+ G + GL G +++ G+ ++G+LG+ + P +V D L+
Sbjct: 129 IRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN 188
Query: 557 ESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIAC 616
+A G H L + ++ WG G+LG G P ++ DR I+
Sbjct: 189 GRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISA 248
Query: 617 GSNYSAAI 624
G +S A+
Sbjct: 249 GEMHSVAL 256
Score = 154 (59.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 72/285 (25%), Positives = 120/285 (42%)
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI----SGPLEGLQVASV 395
V G H+ + G L++WGD T G GT + P +I G + VA
Sbjct: 510 VAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTS-NRTTPVQIVTGNPGNFDRNWVAVA 568
Query: 396 TCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTA 455
G + AL + G ++T+GD + LG D ++ P ++ +A +
Sbjct: 569 AGGVFSLAL-QADGTIWTWGDNSLLQLGT-DPAMLT-PATQRNVPAQLAVASPPSTAFNS 625
Query: 456 AVVEVIVTQSSA-SVSS-GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACG 513
+ V + Q S+ + G L+ WG +LG+G P V + +A G
Sbjct: 626 SWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAG 685
Query: 514 HSLTVGLTTSGHVFTMGSTVYGQLG---NP-NADGKLP--------CLVEDKLAGESVEE 561
S ++ + G ++ G+ GQLG +P +AD P L + ++
Sbjct: 686 TSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWL 745
Query: 562 IA-CGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP-ALVE 604
+A G H A L S ++TWG+ +G+LG+G + P AL+E
Sbjct: 746 VATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLE 790
Score = 131 (51.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLG---HGVGKDIV--QPHLLESLTMTSV----- 337
+A G H+ G ++ WG + G+LG H D + QPH + + +TS
Sbjct: 682 LAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAA 741
Query: 338 -DFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
D++ T G H+ A+ G L+TWG T +G LG+GT IP + P + AS
Sbjct: 742 DDWLVATAGGSHSAALKSNGTLWTWGQNT--SGQLGNGTTTEADIPTALLEPRISVSPAS 799
Query: 395 VTCGP 399
+ GP
Sbjct: 800 LAFGP 804
Score = 55 (24.4 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 978 RDDQPVIRLPNGSVGVLANSSCVSE-SSEGKESMPLQDSENGTRPRSPALSVSSHQVEAE 1036
+ DQ +I L SV + A+S S G S+PL S+ T +P +++ V E
Sbjct: 962 QQDQSIIALFAASVTISASSGPGGIISPTGTVSLPLGGSQKFTITPNPGYAIAGVNV-IE 1020
Query: 1037 WIEQYE 1042
+EQ +
Sbjct: 1021 MVEQLD 1026
Score = 39 (18.8 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 905 PGVYDPENMRPAYIPNGLET-NGVHYSD 931
PG DP N +P +P + T N V +D
Sbjct: 715 PGDADPLNPQPHTVPARILTSNPVSAAD 742
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 149 (57.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P + P+ G +CG HTA++T TG+L+T+G G +G LGH D ++ PR VE
Sbjct: 289 PALLDLPM-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 347
Query: 440 --SGLRTIAVACGVWHT 454
L+ AV CG W+T
Sbjct: 348 VDKQLQVKAVTCGPWNT 364
Score = 149 (57.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 39/80 (48%), Positives = 48/80 (60%)
Query: 326 PHLLESLTMTSVDFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
P LL+ L M S D V +CG HT VT GELYTWG G + G LGH S P+R+
Sbjct: 289 PALLD-LPMGS-DAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHEDTTSLDRPRRV 344
Query: 384 SGPLEG-LQVASVTCGPWHT 402
++ LQV +VTCGPW+T
Sbjct: 345 EYFVDKQLQVKAVTCGPWNT 364
Score = 148 (57.2 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 264 YLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
Y+ RA RPL L + G HA L+ G+VF+WG G+LGHG +
Sbjct: 143 YVSPRAPFY--RPLAPE--LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAE 198
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
++P LLE+L + V G +H+ V+ G++Y WG
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Score = 138 (53.6 bits), Expect = 8.1e-16, Sum P(3) = 8.1e-16
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
G H + AG++++WG G H G LGHGT + P+ + L+GL +A V G WH+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRH--GQLGHGTLEAELEPRLLEA-LQGLVMAEVAAGGWHS 222
Query: 403 ALITSTGQLFTFGDGTFGVL 422
++ TG ++ +G G L
Sbjct: 223 VCVSETGDIYIWGWNESGQL 242
Score = 134 (52.2 bits), Expect = 8.1e-16, Sum P(3) = 8.1e-16
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
P L++ + ++V+ +CG+ H AV+T E+YTWG G G+LGH D P VE
Sbjct: 289 PALLDLPMGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 347
Query: 607 KDRH--VKYIACG 617
D+ VK + CG
Sbjct: 348 VDKQLQVKAVTCG 360
Score = 128 (50.1 bits), Expect = 9.5e-15, Sum P(3) = 9.5e-15
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L+ + G H L+ + GQ+F++G G G LGHG + PR +E+L GL VA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
G WH+ V E +G ++ WG + +L
Sbjct: 218 GGWHSVCVSE-----------TGDIYIWGWNESGQL 242
Score = 123 (48.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 272 LLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLES 331
LL P+ S+ V +CG RH A+VTR GE++TWG G+LGH + +P +E
Sbjct: 291 LLDLPMGSDAV----KASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEY 346
Query: 332 LT--MTSVDFVTCGEFHT 347
V VTCG ++T
Sbjct: 347 FVDKQLQVKAVTCGPWNT 364
Score = 119 (46.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 554 LAGE-SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK 612
LA E ++ GA H +L + +V++WG G +G+LGHG +E P L+EAL+ +
Sbjct: 154 LAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMA 213
Query: 613 YIACGSNYSAAI 624
+A G +S +
Sbjct: 214 EVAAGGWHSVCV 225
Score = 82 (33.9 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 25/84 (29%), Positives = 38/84 (45%)
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
+P ++ G + +CG HTA +VT++ G+L+TWG G +LGH D
Sbjct: 288 FPALLDLPMGSDAVKASCGSRHTA-----VVTRT------GELYTWGWGKYGQLGHEDTT 336
Query: 492 PRLKPTCVPALIDYNFH--KVACG 513
+P V +D V CG
Sbjct: 337 SLDRPRRVEYFVDKQLQVKAVTCG 360
Score = 81 (33.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
DA G V+ WG G + + GT L PR LE+ L + +A G H+
Sbjct: 174 DAAGQVFSWG---------GGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGWHSV 223
Query: 297 LVTRQGEVFTWGEESGGRL 315
V+ G+++ WG G+L
Sbjct: 224 CVSETGDIYIWGWNESGQL 242
Score = 77 (32.2 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 500 PALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKL 554
PAL+D K +CG T +T +G ++T G YGQLG+ + P VE +
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 555 AGE-SVEEIACGAYHVAV 571
+ V+ + CG ++ V
Sbjct: 349 DKQLQVKAVTCGPWNTYV 366
Score = 51 (23.0 bits), Expect = 8.1e-16, Sum P(3) = 8.1e-16
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESG 312
G V P PL + V D+ ++ + A VTR G + G SG
Sbjct: 24 GRGRQVHSPSPLRAGV--DICRVSASWSYTAFVTRGGRLELSGSASG 68
Score = 48 (22.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 110 VEAEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRD 164
V AEV G ++ S + G I GWN+ G +R+L + + + L D
Sbjct: 211 VMAEVAAGGWHSVCVS-ETGDIYIWGWNESGQLALPTRNLAEDGETVAREELNED 264
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/61 (32%), Positives = 26/61 (42%)
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGV---W-HTAAVVEV--IVTQSSASVSSG 472
FG G G R+V S S LR C V W +TA V + SAS ++G
Sbjct: 12 FGFCGFGQELGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRLELSGSASGAAG 71
Query: 473 K 473
+
Sbjct: 72 R 72
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 149 (57.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P + P+ G +CG HTA++T TG+L+T+G G +G LGH D ++ PR VE
Sbjct: 291 PALLDLPM-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 349
Query: 440 --SGLRTIAVACGVWHT 454
L+ AV CG W+T
Sbjct: 350 VDKQLQVKAVTCGPWNT 366
Score = 149 (57.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 39/80 (48%), Positives = 48/80 (60%)
Query: 326 PHLLESLTMTSVDFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
P LL+ L M S D V +CG HT VT GELYTWG G + G LGH S P+R+
Sbjct: 291 PALLD-LPMGS-DAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHEDTTSLDRPRRV 346
Query: 384 SGPLEG-LQVASVTCGPWHT 402
++ LQV +VTCGPW+T
Sbjct: 347 EYFVDKQLQVKAVTCGPWNT 366
Score = 148 (57.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 264 YLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI 323
Y+ RA RPL L + G HA L+ G+VF+WG G+LGHG +
Sbjct: 143 YVSPRAPFY--RPLAPE--LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAE 198
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
++P LLE+L + V G +H+ V+ G++Y WG
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Score = 138 (53.6 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
G H + AG++++WG G H G LGHGT + P+ + L+GL +A V G WH+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRH--GQLGHGTLEAELEPRLLEA-LQGLVMAEVAAGGWHS 222
Query: 403 ALITSTGQLFTFGDGTFGVL 422
++ TG ++ +G G L
Sbjct: 223 VCVSETGDIYIWGWNESGQL 242
Score = 134 (52.2 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
P L++ + ++V+ +CG+ H AV+T E+YTWG G G+LGH D P VE
Sbjct: 291 PALLDLPMGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 349
Query: 607 KDRH--VKYIACG 617
D+ VK + CG
Sbjct: 350 VDKQLQVKAVTCG 362
Score = 128 (50.1 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L+ + G H L+ + GQ+F++G G G LGHG + PR +E+L GL VA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
G WH+ V E +G ++ WG + +L
Sbjct: 218 GGWHSVCVSE-----------TGDIYIWGWNESGQL 242
Score = 123 (48.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 272 LLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLES 331
LL P+ S+ V +CG RH A+VTR GE++TWG G+LGH + +P +E
Sbjct: 293 LLDLPMGSDAV----KASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEY 348
Query: 332 LT--MTSVDFVTCGEFHT 347
V VTCG ++T
Sbjct: 349 FVDKQLQVKAVTCGPWNT 366
Score = 119 (46.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 554 LAGE-SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK 612
LA E ++ GA H +L + +V++WG G +G+LGHG +E P L+EAL+ +
Sbjct: 154 LAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMA 213
Query: 613 YIACGSNYSAAI 624
+A G +S +
Sbjct: 214 EVAAGGWHSVCV 225
Score = 114 (45.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
++G++F+WG G +LGHG E L+P + AL +VA G +V ++ +G ++
Sbjct: 175 AAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIW 234
Query: 530 GSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
G GQL P + L ED GE+V A + ++V G GA
Sbjct: 235 GWNESGQLALPTRN-----LAED---GETVAREA-----TELNEDGSQVKRTG-GAEDGA 280
Query: 590 GHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ + PAL++ +CGS ++A +
Sbjct: 281 PAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVV 315
Score = 82 (33.9 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 25/84 (29%), Positives = 38/84 (45%)
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
+P ++ G + +CG HTA +VT++ G+L+TWG G +LGH D
Sbjct: 290 FPALLDLPMGSDAVKASCGSRHTA-----VVTRT------GELYTWGWGKYGQLGHEDTT 338
Query: 492 PRLKPTCVPALIDYNFH--KVACG 513
+P V +D V CG
Sbjct: 339 SLDRPRRVEYFVDKQLQVKAVTCG 362
Score = 81 (33.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
DA G V+ WG G + + GT L PR LE+ L + +A G H+
Sbjct: 174 DAAGQVFSWG---------GGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGWHSV 223
Query: 297 LVTRQGEVFTWGEESGGRL 315
V+ G+++ WG G+L
Sbjct: 224 CVSETGDIYIWGWNESGQL 242
Score = 77 (32.2 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 500 PALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKL 554
PAL+D K +CG T +T +G ++T G YGQLG+ + P VE +
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 555 AGE-SVEEIACGAYHVAV 571
+ V+ + CG ++ V
Sbjct: 351 DKQLQVKAVTCGPWNTYV 368
Score = 51 (23.0 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESG 312
G V P PL + V D+ ++ + A VTR G + G SG
Sbjct: 24 GRGRQVHSPSPLRAGV--DICRVSASWSYTAFVTRGGRLELSGSASG 68
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/61 (32%), Positives = 26/61 (42%)
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGV---W-HTAAVVEV--IVTQSSASVSSG 472
FG G G R+V S S LR C V W +TA V + SAS ++G
Sbjct: 12 FGFCGFGQELGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRLELSGSASGAAG 71
Query: 473 K 473
+
Sbjct: 72 R 72
Score = 43 (20.2 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 110 VEAEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSN 152
V AEV G ++ S + G I GWN+ G +R+L +
Sbjct: 211 VMAEVAAGGWHSVCVS-ETGDIYIWGWNESGQLALPTRNLAED 252
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 245 (91.3 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 107/383 (27%), Positives = 168/383 (43%)
Query: 275 RPLESNVVLDVHHI---ACGVRHAALVTRQGEVF-TWGE--ESGGRLG-HGVGKD----- 322
+P+ + LD H I ACG L ++ +V WG +LG H KD
Sbjct: 94 QPVPYRLELD-HKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGY 152
Query: 323 --IVQPHL----LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN-AGLLGHGTDV 375
+++P L+ T V V+CG H+ +T +++ G+ H G +V
Sbjct: 153 EYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEV 212
Query: 376 ---SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
SH + R+ EG QV V CG H+ +T G++++ G G G G G S
Sbjct: 213 YSESHKV-HRMQD-FEG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITST 269
Query: 433 PREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
P ++ L+G+ + VA + + A + G +F WG+ + +L
Sbjct: 270 PSKLGGDLAGVTVVQVA--TYGDCCL---------ALSADGGVFGWGNSEYLQLASVTDS 318
Query: 492 PRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PN-ADGKLPC 548
++ P C+P +VACG + L GHVF G YG LG PN ++ LP
Sbjct: 319 TQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWG---YGILGKGPNLSETALPE 375
Query: 549 LVEDKLAGES-------VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPA 601
++ L G + V +I CG H A LT++ E++ WGK G LG G +ED+ P
Sbjct: 376 MIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPW 435
Query: 602 LVEALKDRHVKYIACGSNYSAAI 624
V + V +ACG ++ +
Sbjct: 436 RV-TMPGEPVD-VACGVDHMVTL 456
Score = 223 (83.6 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 90/315 (28%), Positives = 140/315 (44%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV--QPHLLE 330
+P PL+ V ++CG H+ ++T + VF+ G + G+ G V +D V + H +
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVH 220
Query: 331 SLT--MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
+ V V CG+ H+ +T GE+Y+ G G LGH S P ++ G L
Sbjct: 221 RMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS--TPSKLGGDLA 278
Query: 389 GLQVASV-TCGPWHTALITSTGQLFTFGDGTFGVLGH-GDRKNVSYPREVESLSGLRTIA 446
G+ V V T G AL ++ G +F +G+ + L D V+ PR + SG+ +
Sbjct: 279 GVTVVQVATYGDCCLAL-SADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVK 336
Query: 447 -VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE---PRLKPTCVPAL 502
VACG A + E G +F WG G + G E P + P + L
Sbjct: 337 QVACGGTGCAILNE-----------EGHVFVWGYGILGK-GPNLSETALPEMIPPTLFGL 384
Query: 503 IDYN----FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGE 557
++N ++ CG S LT G +F G + G LG + + P V + GE
Sbjct: 385 TEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGE 442
Query: 558 SVEEIACGAYHVAVL 572
V+ +ACG H+ L
Sbjct: 443 PVD-VACGVDHMVTL 456
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/174 (28%), Positives = 77/174 (44%)
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
++ G VF WG +L V P L + V V CG + G +
Sbjct: 295 LSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHV 354
Query: 357 YTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGL-------QVASVTCGPWHTALITST 408
+ WG G+LG G ++S +P+ I L GL +V+ + CG H A +T+
Sbjct: 355 FVWG-----YGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNK 409
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
G+LF +G G LG G ++ +P V ++ G + VACGV H + + +
Sbjct: 410 GELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPG-EPVDVACGVDHMVTLAKSFI 461
Score = 143 (55.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 44/144 (30%), Positives = 62/144 (43%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEE---SGGRLGHGVGKDIVQPH 327
V +PR L + V V +ACG A++ +G VF WG G L +++ P
Sbjct: 321 VNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPT 380
Query: 328 LL---ESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
L E V + CG H A+T GEL+ WG G LG G + P R++
Sbjct: 381 LFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIR--GCLGIGRLEDQYFPWRVT 438
Query: 385 GPLEGLQVASVTCGPWHTALITST 408
P E + VA CG H + +
Sbjct: 439 MPGEPVDVA---CGVDHMVTLAKS 459
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 256 (95.2 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 100/376 (26%), Positives = 168/376 (44%)
Query: 270 DVLLPRPLESNVVLDVHHIA--CGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-- 325
+++ P L V +++ +A C H + +G +TWG G+LGHG D++Q
Sbjct: 43 NLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHG---DMIQRD 99
Query: 326 -PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI- 383
P ++ L+ + G HT V+ G+ + G G + G LG G+ + ++ +
Sbjct: 100 RPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQ--SLGFGWNKYGQLGLGSAKNGFVSVEVE 157
Query: 384 SGPLEGL---QVASVTCGPWHTALITST--GQLFTFGDGTFGVLGHG-----DRKNVSYP 433
S PL + +V +V CG T ++ST + T G +G LGHG + K+ S
Sbjct: 158 STPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVR 217
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
E+ + IA G T V + A +G ++TWG G RLGH ++
Sbjct: 218 LAYEAQPRPKAIASLAG--ETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQ--- 272
Query: 494 LKPTCVPALID-YNFHKVACGHS-LTVGLTTSGHVFTMGST-VYGQLGNPNADGKLPCLV 550
K P ID + + V ++ L+ G S G ++G++ N D P +
Sbjct: 273 -KDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNNGDDWMYPKPM 331
Query: 551 EDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT--PALVEALKD 608
D L+G ++ + G+ H V + + +WG G LG+G + + P V+ L+
Sbjct: 332 MD-LSGWNLRWMDSGSMHHFV-GADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEG 389
Query: 609 RHVKYIACGSNYSAAI 624
HV +ACG +S I
Sbjct: 390 MHVMGVACGFCHSMVI 405
Score = 197 (74.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 53/193 (27%), Positives = 89/193 (46%)
Query: 274 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLT 333
P+ + S + +ACG H V + G V+TWG GRLGH KD P ++
Sbjct: 226 PKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQ 285
Query: 334 MTSV----DFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI-PKRISGPLE 388
+V ++ G ++ G+LY WG +N G D W+ PK + L
Sbjct: 286 RNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNN------GDD---WMYPKPMMD-LS 335
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD--RKNVSYPREVESLSGLRTIA 446
G + + G H + + ++G +G LG+G +K+ + P++V+ L G+ +
Sbjct: 336 GWNLRWMDSGSMHH-FVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMG 394
Query: 447 VACGVWHTAAVVE 459
VACG H+ +V+
Sbjct: 395 VACGFCHSMVIVD 407
Score = 195 (73.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 89/314 (28%), Positives = 129/314 (41%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV--DFVT---CG 343
A G H +V+ G+ +G G+LG G K+ +ES + V D VT CG
Sbjct: 116 AAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACG 175
Query: 344 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI--------------PKRISGPLEG 389
T ++ G G LGHGTD + PK I+ L G
Sbjct: 176 ADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIAS-LAG 234
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
+ V CG HT + G ++T+G G +G LGH ++K+ PR ++ R
Sbjct: 235 ETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQ--RN----- 287
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHK 509
V A++ S+ + G+L+ WG KN +GD KP + L +N
Sbjct: 288 NVLPPNAILSAGSANSACTAGGGQLYMWGK-IKN---NGDDWMYPKP--MMDLSGWNLRW 341
Query: 510 VACG--HSLTVGLTTSGHVFTMGSTVYGQLG-NPNAD--GKLPCLVEDKLAGESVEEIAC 564
+ G H VG +S + G YG+LG PN P V D L G V +AC
Sbjct: 342 MDSGSMHHF-VGADSS--CISWGHAQYGELGYGPNGQKSSAAPKKV-DMLEGMHVMGVAC 397
Query: 565 GAYHVAVLTSRNEV 578
G H V+ R ++
Sbjct: 398 GFCHSMVIVDRTDI 411
Score = 183 (69.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 60/196 (30%), Positives = 90/196 (45%)
Query: 409 GQLFTFGDGTFGVLGH--GDRK-NVSYPREVESLSG--LRTIAVACGVWHTAAVVEVIVT 463
G+L G + ++G G + N+ P + L G +R +A C +H A+ +V
Sbjct: 20 GELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVAL-DV--- 75
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
G+ +TWG +K +LGHGD R +PT V L + K A G + TV ++
Sbjct: 76 -------EGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDD 128
Query: 524 GHVFTMGSTVYGQLGNPNA-DGKLPCLVEDK----LAGESVEEIACGAYHVAVLTSRN-- 576
G G YGQLG +A +G + VE + + V +ACGA L+S
Sbjct: 129 GQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGA 188
Query: 577 EVYTWGKGANGRLGHG 592
+ T G G+LGHG
Sbjct: 189 SILTAGLPQYGQLGHG 204
Score = 131 (51.2 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 524 GHVFTMGSTVYGQLGNPNA--DGKL--PCLVEDKLAGESVEEIA--CGAYHVAVLTSRNE 577
G + G+T + +G +G L P + L G ++ +A C ++H L
Sbjct: 20 GELLFCGATAWDIIGKRKGAMEGNLVSPTRLRP-LVGVNIRFVATGCASFHCVALDVEGR 78
Query: 578 VYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
YTWG+ G+LGHGD+ R P +V L + A G N++ +
Sbjct: 79 CYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVV 125
Score = 44 (20.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1068 RFGEHQAETWWSENREKVYERYNVRGLDKSSASGQA 1103
R G + + W+ R V++R NV + ++G A
Sbjct: 266 RLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSA 301
Score = 38 (18.4 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 715 DRLDKSDLKLSKSAMPSNVDLIKQLDCKAAKQGK--KADAFSLVRSSQAPS 763
DRL++ ++ K ++ +V+ +K+ + A KQ K A ++S+A S
Sbjct: 413 DRLEQLEVYDGKGSLEESVEEVKE-ETLAPKQQAVTKRGASKKRKASKASS 462
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 193 (73.0 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 68/229 (29%), Positives = 108/229 (47%)
Query: 392 VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL---SGLRTIAVA 448
VA V G H L+++G+ G LG GD ++ + P+ VE+ SGL +A
Sbjct: 210 VALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIA 269
Query: 449 CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH 508
CG HTA + T S+ +T+G G+ +LGH + P V L ++ +
Sbjct: 270 CGAHHTALLTYRKETPKGPSIC----WTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYL 325
Query: 509 -KVACGHSLTVGLTTSGHVFTMG-STVYGQLGNPN------ADGKLPCLVEDKLAGESVE 560
V CG T +++ G+V++ G G + N D +P K++G S
Sbjct: 326 VSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVP----RKISGGSSR 381
Query: 561 -----EIACGAYH-VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
+++CGA H V V+ ++++WG+G NG LG G+V D P LV
Sbjct: 382 FRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 189 (71.6 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 63/215 (29%), Positives = 97/215 (45%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS---VDFVTCGEFHTCAVTMA-----GE 355
+++WG G+LG G G+ +P +E+ S V + CG HT +T G
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
W G G LGH ++ S +P+ +S E + SV CG +HT++++S G ++++G
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Query: 416 ---------DGTFGVLGHGDRKNVSYPREVESLSG-LRT-IAVACGVWHTAAVVEVIVTQ 464
D F + GD S PR++ S R + V+CG HT VV+
Sbjct: 349 MERGLGLCPDVNFTEVEAGDD---SVPRKISGGSSRFRDPVQVSCGAAHTVLVVD----- 400
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 499
KL++WG G LG G+ PT V
Sbjct: 401 -----GGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 174 (66.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 57/169 (33%), Positives = 82/169 (48%)
Query: 283 LDVHHIACGVRHAALVTRQGEV-------FTWGEESGGRLGHGVGKDIVQPH----LLES 331
L V+ IACG H AL+T + E +T+G G+LGH K P L E
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEH 322
Query: 332 LTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG--HGTDVSHW---IPKRISGP 386
+ SVD CG FHT V+ G +++WG GL + T+V +P++ISG
Sbjct: 323 AYLVSVD---CGLFHTSVVSSEGYVWSWGM-ERGLGLCPDVNFTEVEAGDDSVPRKISGG 378
Query: 387 LEGLQ-VASVTCGPWHTALITSTG-QLFTFGDGTFGVLGHGDRKNVSYP 433
+ V+CG HT L+ G +L+++G G GVLG G+ + P
Sbjct: 379 SSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVP 427
Score = 158 (60.7 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 68/243 (27%), Positives = 106/243 (43%)
Query: 326 PHLLESLTMT-SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
P LL S ++ + + GE HT A+T G +Y+WG G G LG G + +P +
Sbjct: 6 PTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMF--GRLGTGKESDELVPVLVE 63
Query: 385 GP--LEG--LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH-GDR-------KNVSY 432
P EG +++ V G +H+ ++ G ++ +G +G LG G+ KN+ +
Sbjct: 64 FPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNL-F 122
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP 492
RE S S L G V+ S A + G L+ WG+ + +P
Sbjct: 123 ERETSS-SSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQ---DSEPDP 178
Query: 493 RLKPTCVPA---LIDYNFH---KVACGHSLTVGLTTSGHVFTMGS---TVYGQLGNPNAD 543
RL T +P ++D++ KVACG V L G + S +V GN N
Sbjct: 179 RLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGN-NHH 237
Query: 544 GKL 546
G+L
Sbjct: 238 GQL 240
Score = 156 (60.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 55/207 (26%), Positives = 85/207 (41%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR---KNVSYPREVESLSGLRTIA 446
L+V +V G + I + G L+ +G+ R ++ P + G +
Sbjct: 142 LKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLK 201
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
VACG H A+V S L++WG+ +LG GD E R +P V +
Sbjct: 202 VACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKS 261
Query: 507 ---FHKVACGHSLTVGLTTSGHV-------FTMGSTVYGQLGN-PNADGKLPCLVEDKLA 555
+ +ACG T LT +T G GQLG+ N LP V D
Sbjct: 262 GLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPE 321
Query: 556 GESVEEIACGAYHVAVLTSRNEVYTWG 582
+ + CG +H +V++S V++WG
Sbjct: 322 HAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Score = 155 (59.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 72/236 (30%), Positives = 102/236 (43%)
Query: 340 VTCGEFHTCAVTMAGE-----------LYTWGDGTHNAGLLGHGTDVSHWIPKRIS--GP 386
V CG+ H A+ G+ LY+WG+ H G LG G S P+ +
Sbjct: 202 VACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHH--GQLGLGDGESRARPQTVETFNQ 259
Query: 387 LEGLQVASVTCGPWHTALITSTGQL-------FTFGDGTFGVLGHGDRKNVSYPREVESL 439
GL V + CG HTAL+T + +TFG G G LGH K+ S P V L
Sbjct: 260 KSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDL 319
Query: 440 -SGLRTIAVACGVWHTAAVV-EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKP 496
++V CG++HT+ V E V S + G L D + + GD PR
Sbjct: 320 PEHAYLVSVDCGLFHTSVVSSEGYVW--SWGMERG-LGLCPDVNFTEVEAGDDSVPRKIS 376
Query: 497 TCVPALIDYNFHKVACGHSLTVGLTTSGH-VFTMGSTVYGQLGNPN-ADGKLPCLV 550
D +V+CG + TV + G+ +++ G G LG N +D +P LV
Sbjct: 377 GGSSRFRDPV--QVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/126 (30%), Positives = 63/126 (50%)
Query: 489 DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLP 547
DK P L + + +A G + T+ LT G V++ G ++G+LG +D +P
Sbjct: 3 DKSPTL---LISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVP 59
Query: 548 CLVE--DKLAGESVE--EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
LVE ++ G+ + +A GAYH ++ V+ WG G+LG D E+ P L+
Sbjct: 60 VLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLI 118
Query: 604 EALKDR 609
+ L +R
Sbjct: 119 KNLFER 124
Score = 130 (50.8 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 36/118 (30%), Positives = 64/118 (54%)
Query: 526 VFTMGSTVYGQLGNPNADGKL-PCLVE--DKLAGESVEEIACGAYHVAVLTSRNEV---- 578
+++ G+ +GQLG + + + P VE ++ +G +V +IACGA+H A+LT R E
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 579 ---YTWGKGANGRLGHGDVEDRKTPALVEALKDR-HVKYIACGSNYSAAICLHKWVSS 632
+T+G G NG+LGH + P V L + ++ + CG +++ + +V S
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWS 346
Score = 118 (46.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 54/217 (24%), Positives = 88/217 (40%)
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKN------VSYPREVESLSGLRT 444
++ S+ G HT +T G ++++G G FG LG G + V +P + E +R
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEG-DRIRI 75
Query: 445 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID 504
+ VA G +H+ AV + G ++ WG +LG D E L P + L +
Sbjct: 76 VGVAAGAYHSLAVSD-----------DGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFE 123
Query: 505 -------YNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL---GN-PNADGK-------- 545
N G L V +G + ++ G L GN P D +
Sbjct: 124 RETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFT 183
Query: 546 ---LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVY 579
+P + D G +V ++ACG HV L +++
Sbjct: 184 SIPIPFPILD-FHGRTVLKVACGDEHVVALVGPGDIH 219
Score = 109 (43.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 556 GESVEEIACGAYHVAVLTSRNEV-----------YTWGKGANGRLGHGDVEDRKTPALVE 604
G +V ++ACG HV L ++ Y+WG +G+LG GD E R P VE
Sbjct: 196 GRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVE 255
Query: 605 ALKDRH---VKYIACGSNYSAAICLHK 628
+ V IACG++++A + K
Sbjct: 256 TFNQKSGLTVYDIACGAHHTALLTYRK 282
Score = 105 (42.0 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDF-----VTC 342
+A G H +T G V++WG GRLG G D + P L+E D V
Sbjct: 21 LAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAA 80
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLG 370
G +H+ AV+ G ++ WG + G LG
Sbjct: 81 GAYHSLAVSDDGSVWCWGYNIY--GQLG 106
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 243 (90.6 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 95/349 (27%), Positives = 154/349 (44%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ---PHLLESLTMTSVDFVTCGEFHTC 348
V H + T G V T G+ G+LG +G+ +++ P L+ L V G HT
Sbjct: 25 VSHRSHNTEPGLVLTLGQGDVGQLG--LGESVLERKKPALVPLLQ--DVVQAEAGGMHTV 80
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 81 CLSQSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALT 135
Query: 407 STGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
G++F +G GV+G + K P +V+ + + VA G H +
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DTQVVKVASGNDHLVMLTTDGDL 193
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID-----YNFHKVACGHSLTV 518
+ G+L + NR G E L P CV F CG T
Sbjct: 194 YTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTF 253
Query: 519 GLTTSGHVFTMGSTVYGQLGNPNADGK-LPC-LVEDKLAGESVEEIACGAYHVAVLTSRN 576
++ GHV+ G + Y QLG P +P L K + +S + G +H + S
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEG 313
Query: 577 EVYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ Y+ G+ GRLG G+ E++ P L+ L V +ACG++ A+
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV--VSSVACGASVGYAV 360
Score = 229 (85.7 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 95/384 (24%), Positives = 168/384 (43%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG VL +P ++ DV G H +++ G+V+++G G LG
Sbjct: 44 DVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--KNVSYP 433
+P ++ L+ QV V G H ++T+ G L+T G G G LG N
Sbjct: 161 KSMVPVQVQ--LD-TQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 434 REVESLSGLRTIAVAC-GVWHTAAVVEVIV-TQSSASVS-SGKLFTWGDGDKNRLGHGDK 490
+ +E L R + + G + + ++S G ++ +G + ++LG
Sbjct: 218 QGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGT 277
Query: 491 EPRLKPTCVPALIDYNFHKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGK-L 546
P + + + V G TV + + G +++G YG+LG A+ K +
Sbjct: 278 GSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSI 337
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV--E 604
P L+ +L V +ACGA ++ V+ WG G N +LG G +D +P + +
Sbjct: 338 PTLIS-RLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGK 394
Query: 605 ALKDRHVKYIACGSNYSAAICLHK 628
L++R V ++ G ++ + K
Sbjct: 395 QLENREVLTVSSGGQHTVLLVKDK 418
Score = 150 (57.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 52/168 (30%), Positives = 81/168 (48%)
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKPTCVPALIDYNFHKVACGHSLT 517
+V V+ S + G + T G GD +LG G+ R KP VP L D + G T
Sbjct: 22 KVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVV--QAEAGGMHT 79
Query: 518 VGLTTSGHVFTMGSTVYGQLG-NPNADGK--LPCLVEDKLAGESVEEIACGAYHVAVLTS 574
V L+ SG V++ G G LG + + +G +P VE + E V +++ G H A LT
Sbjct: 80 VCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ---EKVVQVSAGDSHTAALTE 136
Query: 575 RNEVYTWG--KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
V+ WG + NG +G + +K+ V+ D V +A G+++
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPM-KKSMVPVQVQLDTQVVKVASGNDH 183
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 62/221 (28%), Positives = 96/221 (43%)
Query: 380 PKRIS---GPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
PKRI+ P E S H + T G + T G G G LG G+ +V ++
Sbjct: 3 PKRIAKRRSPPEDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGE--SVLERKKP 60
Query: 437 ESLSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK 495
+ L+ + A G HT V ++QS G+++++G D+ LG +
Sbjct: 61 ALVPLLQDVVQAEAGGMHT-----VCLSQS------GQVYSFGCNDEGALGRDTSVEGSE 109
Query: 496 PTCVPALIDYNFH--KVACGHSLTVGLTTSGHVFTMGS--TVYGQLG--NPNADGKLPCL 549
VP ++ +V+ G S T LT G VF GS G +G P +P
Sbjct: 110 --MVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQ 167
Query: 550 VEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
V+ V ++A G H+ +LT+ ++YT G G G+LG
Sbjct: 168 VQ---LDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 240 (89.5 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 103/356 (28%), Positives = 156/356 (43%)
Query: 308 GEESGGRLGHGVGKDIVQPHLLESLTMTSVDF--VTCGEFHTCAVTMAGELYTWGDGTHN 365
G S G+LG G +D++ P LL+ ++ D + G H+ +T AGEL+ G HN
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCG---HN 57
Query: 366 -AGLLG--HGTDVSHWIPKRISGPLEGLQVASVTCGPWH-TALITSTGQLFTFGDGTFGV 421
AG LG H DV + + L G V V CG W T ++ G + + G FG
Sbjct: 58 KAGQLGLNHTEDVLCFT---LCTALSGFCVQEVACG-WDFTIILGRAGLVLSCGSNAFGQ 113
Query: 422 LGHGDRKNVSY-PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
LG P++++SL + + +A G+ H A E SG +F WG G
Sbjct: 114 LGVPQISGPCLIPQKIKSLKE-KAVGIAAGLRHALAATE-----------SGLVFQWGTG 161
Query: 481 DKNR---LGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTT-----SGHVFTMGST 532
+R + G P P I N + C SL+ LT+ GH++ GS
Sbjct: 162 MASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSN 221
Query: 533 VYGQLGNPNADGKLPCLVEDKL-AGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG- 590
+GQL + P ++ + + E + + G H+ T +V+TWG+ G+LG
Sbjct: 222 KHGQLVSKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGR 281
Query: 591 HGDV--EDR--KTPALV------EALKD-RH---VKYIACGSNYSAAI---CLHKW 629
H V DR K + + EA K+ H + IACGS ++ A+ C W
Sbjct: 282 HAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVVGDCCLSW 337
Score = 228 (85.3 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 109/393 (27%), Positives = 164/393 (41%)
Query: 265 LGTRADVLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
LG + DVL+P+ L+ S D+ IA G H+A++T GE+F G G+LG +D
Sbjct: 10 LGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTED 69
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSH--WIP 380
++ L +L+ V V CG T + AG + + G G LG +S IP
Sbjct: 70 VLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAF--GQLGV-PQISGPCLIP 126
Query: 381 KRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV---LGHGDRKNVSY----P 433
++I E + + G H T +G +F +G G + G V + P
Sbjct: 127 QKIKSLKE--KAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEP 184
Query: 434 REVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPR 493
E++ G+ V+ + T S ++ G L+ WG +L KE
Sbjct: 185 CEIKGNPGVLLCQVSLSAYLT----------SLSTAGEGHLYVWGSNKHGQLV--SKEVF 232
Query: 494 LKPTCVPALIDYNF--HK----VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNA----- 542
L P ID F H+ V G + V T +G VFT G YGQLG A
Sbjct: 233 LVE---PKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVAD 289
Query: 543 -----DGKLPCLVE---DKLAGESVE--EIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
D LPC + +K ++ +IACG+ H + + +WG +G G G
Sbjct: 290 RVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVVG-DCCLSWGWNEHGMCGDG 348
Query: 593 DVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
+ P V+AL I CG+ +S A+C
Sbjct: 349 TEANVHVPKPVKALGYAKQILIGCGAGHSLALC 381
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 51/237 (21%), Positives = 98/237 (41%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G V+ WG + + K + + P ++ N + + ++ +L T
Sbjct: 153 GLVFQWGTGMASRAKRVHQGKTLPVFWAAKE---PCEIKGNPGVLLCQVSLSAYLTSLST 209
Query: 300 R-QGEVFTWGEESGGRLGHGVGKDI--VQPHLLES--LTMTSVDFVTCGEFHTCAVTMAG 354
+G ++ WG G+L V K++ V+P +++ + + V G H A T G
Sbjct: 210 AGEGHLYVWGSNKHGQL---VSKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETG 266
Query: 355 ELYTWG--D----GTHNAGLLGHGT-DVSHWIP--KRISGPLEG---LQVASVTCGPWHT 402
+++TWG D G H A + + ++P + G + + + CG H
Sbjct: 267 KVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHN 326
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
+ L ++G G+ G G NV P+ V++L + I + CG H+ A+ +
Sbjct: 327 LAVVGDCCL-SWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAGHSLALCQ 382
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 226 (84.6 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 70/233 (30%), Positives = 104/233 (44%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L+ + G H L+ + GQ+F++G G G LGHG + PR +E+L GL VA
Sbjct: 164 LRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAA 223
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHK 509
G WH+ V E +G ++ WG + +L +PA K
Sbjct: 224 GGWHSVCVSE-----------TGDIYIWGWNESGQLA------------LPARSLAEDGK 260
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN---ADGKLPCLVEDKLAGESVEEIACGA 566
G + GL G + G+ G P A P L++ L ++V+ +CG+
Sbjct: 261 TITGDA--PGLNEDGSEAKRATE--GEDGGPTPFIAVQPFPALLDLPLGSDAVKA-SCGS 315
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH--VKYIACG 617
H AV+T E+YTWG G G+LGH D P VE D+ V+ ++CG
Sbjct: 316 RHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCG 368
Score = 140 (54.3 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 30/77 (38%), Positives = 43/77 (55%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P + PL G +CG HTA++T TG+L+T+G G +G LGH D ++ P VE
Sbjct: 297 PALLDLPL-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYF 355
Query: 440 --SGLRTIAVACGVWHT 454
L+ V+CG W+T
Sbjct: 356 VDKQLQVRTVSCGPWNT 372
Score = 140 (54.3 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
RPL L + G HA L+ G+VF+WG G+LGHG + +P +LE+L
Sbjct: 158 RPLAPT--LRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQG 215
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWG 360
+ V G +H+ V+ G++Y WG
Sbjct: 216 LPMAEVAAGGWHSVCVSETGDIYIWG 241
Score = 139 (54.0 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
G H + AG++++WG G H G LGHGT + P R+ L+GL +A V G WH+
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRH--GQLGHGTLEAEREP-RVLEALQGLPMAEVAAGGWHS 228
Query: 403 ALITSTGQLFTFGDGTFGVL 422
++ TG ++ +G G L
Sbjct: 229 VCVSETGDIYIWGWNESGQL 248
Score = 137 (53.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 33/78 (42%), Positives = 43/78 (55%)
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG 385
P LL+ + +CG HT VT GELYTWG G + G LGH S P R+
Sbjct: 297 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHKDTTSLDRPCRVEY 354
Query: 386 PLEG-LQVASVTCGPWHT 402
++ LQV +V+CGPW+T
Sbjct: 355 FVDKQLQVRTVSCGPWNT 372
Score = 118 (46.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
GA H +L + +V++WG G +G+LGHG +E + P ++EAL+ + +A G +S +
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCV 231
Score = 93 (37.8 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 28/96 (29%), Positives = 43/96 (44%)
Query: 488 GDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD 543
G P + PAL+D K +CG T +T +G ++T G YGQLG+ +
Sbjct: 285 GGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTT 344
Query: 544 G-KLPCLVEDKLAGE-SVEEIACGAYHVAVLTSRNE 577
PC VE + + V ++CG ++ V E
Sbjct: 345 SLDRPCRVEYFVDKQLQVRTVSCGPWNTYVFAVEKE 380
Score = 78 (32.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
DA G V+ WG G + + GT PR LE+ L + +A G H+
Sbjct: 180 DAAGQVFSWG---------GGRHGQLGH-GTLEAEREPRVLEALQGLPMAEVAAGGWHSV 229
Query: 297 LVTRQGEVFTWGEESGGRL 315
V+ G+++ WG G+L
Sbjct: 230 CVSETGDIYIWGWNESGQL 248
Score = 59 (25.8 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 300 RQGEVFTWGEESGGR-LGHGVGKDIVQPHLLESLTMTSVDF--VTCGEFHTCAVTMAGEL 356
R G F +G G+ LG G G+ + P LE + S+D V+ +T VT G L
Sbjct: 5 RPGAWFGFGFCGFGQALGSGRGRQVYSPEPLE-VPGASLDVCRVSASWSYTATVTRGGRL 63
Query: 357 YTWGDGTHNAG 367
G + +AG
Sbjct: 64 ELSGSVSGSAG 74
Score = 51 (23.0 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 21/63 (33%), Positives = 28/63 (44%)
Query: 352 MAGELY-TW-GDGTHNAG-LLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
MAGE W G G G LG G + P+ + P L V V+ +TA +T
Sbjct: 1 MAGERPGAWFGFGFCGFGQALGSGRGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRG 60
Query: 409 GQL 411
G+L
Sbjct: 61 GRL 63
Score = 40 (19.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 112 AEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSN 152
AEV G ++ S + G I GWN+ G +R L +
Sbjct: 219 AEVAAGGWHSVCVS-ETGDIYIWGWNESGQLALPARSLAED 258
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 178 (67.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 52/183 (28%), Positives = 88/183 (48%)
Query: 289 ACGVRHAALVTRQGEVFTWGEES--GGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFH 346
A G H L+T GEV+++G+ G I++ LL +T V G FH
Sbjct: 47 ALGTNHGLLLTEGGEVYSFGKLPWRSGPEEFCANSPILENTLLGQHVIT----VAAGSFH 102
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS----GPLEGLQVASVTCGPWHT 402
AVT G +Y WG+ + + + V P IS PL ++V + CG HT
Sbjct: 103 NGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLACGEEHT 162
Query: 403 ALITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
++ + +++ +G G G++ V+ P++VE L+G + +ACG +H+ A+V+ +
Sbjct: 163 LALSLSREIWAWGSGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQIACGAYHSLALVQCL 220
Query: 462 VTQ 464
Q
Sbjct: 221 PVQ 223
Score = 169 (64.5 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 43/155 (27%), Positives = 75/155 (48%)
Query: 425 GDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS--GKLFTWGDGDK 482
G + +S P + +S V T A+ ++ A + S ++++WG G
Sbjct: 472 GGSRRLSLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKD 531
Query: 483 NRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNA 542
+LGHGD PRL+P CV +L +++ G ++ LT V++ GS ++GQLG+ N+
Sbjct: 532 GQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLGHTNS 591
Query: 543 DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNE 577
+P L K+ G+ V A G+ + L +
Sbjct: 592 PTTVPRLA--KVCGDGVWSTAAGSDYSLFLADEED 624
Score = 138 (53.6 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 42/140 (30%), Positives = 67/140 (47%)
Query: 276 PLESNVVLDVHHI--ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLL---- 329
P+ N +L H I A G H VT G V+ WG S G+ + +P +
Sbjct: 82 PILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISD 141
Query: 330 -ESLTMTSVDFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
E+ + SV + CGE HT A++++ E++ WG G GL+ V+ P+++
Sbjct: 142 SETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQ-LGLITTTFPVTK--PQKVEH- 197
Query: 387 LEGLQVASVTCGPWHT-ALI 405
L G V + CG +H+ AL+
Sbjct: 198 LAGRVVLQIACGAYHSLALV 217
Score = 133 (51.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 54/200 (27%), Positives = 82/200 (41%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P+R+ G L G V G H L+T G++++FG + + + P +L
Sbjct: 32 PERLPG-LCGKTVLQAALGTNHGLLLTEGGEVYSFGKLPWR--SGPEEFCANSPILENTL 88
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE--PRLKPT 497
G I VA G +H AV E G ++ WG+ + ++ P +P
Sbjct: 89 LGQHVITVAAGSFHNGAVTE-----------GGVVYMWGNNSSGQCAVANQPYVPEPQPI 137
Query: 498 CVP-----ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED 552
+ L+ ++ACG T+ L+ S ++ GS L P VE
Sbjct: 138 SISDSETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQLGLITTTFPVTKPQKVEH 197
Query: 553 KLAGESVEEIACGAYHVAVL 572
LAG V +IACGAYH L
Sbjct: 198 -LAGRVVLQIACGAYHSLAL 216
Score = 127 (49.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 32/96 (33%), Positives = 51/96 (53%)
Query: 526 VFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGA 585
V++ G GQLG+ + +L L L G+ V +++ G +H LT++++VY+WG
Sbjct: 523 VWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNI 582
Query: 586 NGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
G+LGH + P L + D V A GS+YS
Sbjct: 583 FGQLGHTN-SPTTVPRLAKVCGDG-VWSTAAGSDYS 616
Score = 121 (47.7 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 570 AVLTS-RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
A+L S R EV++WG+G +G+LGHGDV R P V++L + V ++ G ++S A+
Sbjct: 514 ALLPSLRTEVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKS 573
Query: 629 WVSS 632
V S
Sbjct: 574 QVYS 577
Score = 103 (41.3 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 53/208 (25%), Positives = 84/208 (40%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI 379
G V P L L +V G H +T GE+Y++G +G +
Sbjct: 26 GSCSVTPERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGKLPWRSG----PEEFCANS 81
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR----- 434
P + L G V +V G +H +T G ++ +G+ + G ++ V P+
Sbjct: 82 PI-LENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISIS 140
Query: 435 --EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP 492
E L +R + +ACG HT A+ S+S +++ WG G + L P
Sbjct: 141 DSETSPLLSVRVLQLACGEEHTLAL----------SLSR-EIWAWGSGCQLGL-ITTTFP 188
Query: 493 RLKPTCVPALIDYNFHKVACG--HSLTV 518
KP V L ++ACG HSL +
Sbjct: 189 VTKPQKVEHLAGRVVLQIACGAYHSLAL 216
Score = 87 (35.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 403 ALITSTG-QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
AL+ S +++++G G G LGHGD P V+SL G I ++ G H+ A+
Sbjct: 514 ALLPSLRTEVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALT--- 570
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKE---PRLKPTC 498
+ ++++WG +LGH + PRL C
Sbjct: 571 --------AKSQVYSWGSNIFGQLGHTNSPTTVPRLAKVC 602
Score = 40 (19.1 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 257 GADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHA-ALV 298
G+ + + T V P+ +E V IACG H+ ALV
Sbjct: 175 GSGCQLGLITTTFPVTKPQKVEHLAGRVVLQIACGAYHSLALV 217
Score = 39 (18.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 697 SEASNRRNSLPRLSGENKDRL 717
SE +RR SLP L + RL
Sbjct: 470 SEGGSRRLSLPGLLSQVSPRL 490
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 103 DLICKDKVEAEVWIAGL 119
+++C DK E + ++ GL
Sbjct: 330 NILCTDKKEVKEYLIGL 346
>TAIR|locus:2034486 [details] [associations]
symbol:BRX "BREVIS RADIX" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0015250
"water channel activity" evidence=ISS] [GO:0048364 "root
development" evidence=IMP] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=IMP] [GO:0048527 "lateral root development" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009737
GO:GO:0005634 GO:GO:0009734 EMBL:AC079041 GO:GO:0048527
GO:GO:0009736 eggNOG:NOG286599 HOGENOM:HOG000240563
ProtClustDB:CLSN2688709 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AY702648 EMBL:AY702649 EMBL:BT002854
EMBL:BT004390 IPI:IPI00541613 PIR:A86443 RefSeq:NP_174471.2
UniGene:At.40252 IntAct:Q17TI5 STRING:Q17TI5 PRIDE:Q17TI5
EnsemblPlants:AT1G31880.1 GeneID:840078 KEGG:ath:AT1G31880
TAIR:At1g31880 InParanoid:Q84JB6 OMA:NRERIQT PhylomeDB:Q17TI5
Genevestigator:Q17TI5 Uniprot:Q17TI5
Length = 344
Score = 224 (83.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 43/87 (49%), Positives = 60/87 (68%)
Query: 1003 SSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRV 1062
S G M + +R P++S +S +++AEWIE+ EPGVYIT+ L DGTR+L+RV
Sbjct: 258 SYHGGPPMDAARTTTSSRDDPPSMSNAS-EMQAEWIEEDEPGVYITIRQLSDGTRELRRV 316
Query: 1063 RFSRRRFGEHQAETWWSENREKVYERY 1089
RFSR RFGE A+TWW +NRE++ +Y
Sbjct: 317 RFSRERFGEVHAKTWWEQNRERIQTQY 343
Score = 178 (67.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 1036 EWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVRGLD 1095
EW+ Q EPGV+IT +L G DLKR+RFSR F + QA+ WW EN +K+ E YNV+ +
Sbjct: 140 EWMAQVEPGVHITFASLPTGGNDLKRIRFSREMFDKWQAQRWWGENYDKIVELYNVQRFN 199
Query: 1096 KSS 1098
+ +
Sbjct: 200 RQA 202
Score = 51 (23.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 887 DVIKSLTAQLKDMAERLPPGVY 908
+ +KSLT Q+KDMA + G Y
Sbjct: 30 EAVKSLTIQIKDMALKFS-GAY 50
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 237 (88.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 100/360 (27%), Positives = 163/360 (45%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ---PHLLESLTMTSVDFVTCGEFHTC 348
V H + T G V T G+ G+LG +G+ +++ P L+ L V G HT
Sbjct: 25 VSHRSHNTEPGLVLTLGQGDVGQLG--LGESVLERKKPALVPLLQ--DVVQAEAGGMHTV 80
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 81 CLSQSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALT 135
Query: 407 STGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
G++F +G GV+G + K P +V+ L + VA G H V++T
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDA-PVVKVASGNDHL-----VMLT 188
Query: 464 QSSASVSSGKLFTWGDGDKNRLGH--------GDKEPR---LKPTCVPALID-----YNF 507
+ G L+T G G++ +LG G ++ L P CV F
Sbjct: 189 ------NDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRF 242
Query: 508 HKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPC-LVEDKLAGESVEEIACG 565
CG T ++ GHV+ G + Y QLG P +P L K + +S + G
Sbjct: 243 QDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGG 302
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGD-VEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+H + S + Y+ G+ GRLG G+ E++ P L+ L V +ACG++ A+
Sbjct: 303 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV--VSSVACGASVGYAV 360
Score = 220 (82.5 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 99/391 (25%), Positives = 168/391 (42%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG VL +P ++ DV G H +++ G+V+++G G LG
Sbjct: 44 DVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH--------GDR 427
+P ++ L+ V V G H ++T+ G L+T G G G LG G R
Sbjct: 161 KSMVPVQVQ--LDA-PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 428 KNVS---YPREV----ESLSG-LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGD 479
+ + PR V G +R CG + T A+ G ++ +G
Sbjct: 218 QGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISR-----------EGHVYGFGL 266
Query: 480 GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVAC--GHSLTVGLTTSGHVFTMGSTVYGQL 537
+ ++LG P + + + V G TV + + G +++G YG+L
Sbjct: 267 SNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 538 G-NPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVE 595
G A+ K +P L+ +L V +ACGA ++ V+ WG G N +LG G E
Sbjct: 327 GLGEGAEEKSIPTLIS-RLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDE 383
Query: 596 DRKTPALV--EALKDRHVKYIACGSNYSAAI 624
D +P + + L++R V ++ G ++ +
Sbjct: 384 DAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 148 (57.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 52/168 (30%), Positives = 81/168 (48%)
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKPTCVPALIDYNFHKVACGHSLT 517
+V V+ S + G + T G GD +LG G+ R KP VP L D + G T
Sbjct: 22 KVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVV--QAEAGGMHT 79
Query: 518 VGLTTSGHVFTMGSTVYGQLG-NPNADGK--LPCLVEDKLAGESVEEIACGAYHVAVLTS 574
V L+ SG V++ G G LG + + +G +P VE + E V +++ G H A LT
Sbjct: 80 VCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ---EKVVQVSAGDSHTAALTE 136
Query: 575 RNEVYTWG--KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
V+ WG + NG +G + +K+ V+ D V +A G+++
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPM-KKSMVPVQVQLDAPVVKVASGNDH 183
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 79/300 (26%), Positives = 114/300 (38%)
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQ-VASVTCGPWHTAL 404
H T G + T G G + G LG G V K PL LQ V G HT
Sbjct: 27 HRSHNTEPGLVLTLGQG--DVGQLGLGESVLER-KKPALVPL--LQDVVQAEAGGMHTVC 81
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVS--YPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
++ +GQ+++FG G LG S P +VE + + V+ G HTAA+ E
Sbjct: 82 LSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSAGDSHTAALTE--- 136
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTT 522
V F +G L K + P V +D KVA G+ V LT
Sbjct: 137 ---DGRVFLWGSFRDNNGVIGLLEPMKKS--MVP--VQVQLDAPVVKVASGNDHLVMLTN 189
Query: 523 SGHVFTMGSTVYGQLGN-P----NADGK-------LPCLVEDKLAGES----VEEIACGA 566
G ++T+G GQLG P N G+ +P V K G ++ CGA
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGA 249
Query: 567 YHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICL 626
Y ++ VY +G +LG P + + K+ ++ +C+
Sbjct: 250 YFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCM 309
>TAIR|locus:2014345 [details] [associations]
symbol:BRX-LIKE3 "AT1G54180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
EMBL:AC005287 EMBL:AC006577 HOGENOM:HOG000240563 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 EMBL:BT020396 EMBL:BT020515
EMBL:AY735539 EMBL:AY924710 IPI:IPI00534377 IPI:IPI00929932
PIR:A96583 RefSeq:NP_001154422.1 RefSeq:NP_175820.2
UniGene:At.66930 EnsemblPlants:AT1G54180.1 GeneID:841858
KEGG:ath:AT1G54180 TAIR:At1g54180 eggNOG:NOG258623
InParanoid:Q5HZ09 OMA:KFSEMHA Genevestigator:Q5HZ09 Uniprot:Q5HZ09
Length = 370
Score = 221 (82.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 52/142 (36%), Positives = 80/142 (56%)
Query: 951 PTGVDSVSNNGTGGLSQFLRETTGASGRD-DQPVIRLPNGSVGVLANSSCVSESSEGKES 1009
P VS +G G Q ++++ + ++P +P GS G + S S E+
Sbjct: 230 PLQTPPVSEDG-GSQIQSVKDSPVTPPLERERPHRNIP-GSSGFASTPKLSSISGTKTET 287
Query: 1010 MPLQDSENGTR-PRSPALSVSS-HQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRR 1067
+ S + RS +SVS+ +E+EW+EQ EPG+YIT+ AL DG R+L+RVRFSR
Sbjct: 288 SSIDGSARSSSVDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRD 347
Query: 1068 RFGEHQAETWWSENREKVYERY 1089
+FGE A WW +NR ++ ++Y
Sbjct: 348 KFGETHARLWWEQNRARIQQQY 369
Score = 58 (25.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 889 IKSLTAQLKDMAERLPPGVYDPENMRP 915
IKSLT+QLKDMA + G Y +N +P
Sbjct: 38 IKSLTSQLKDMAVKAS-GAY--KNCKP 61
Score = 38 (18.4 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 137 NDGGLYLEDSRD--LTSNSASDSSV-SLTRDISSPEVSVSLNHPISSPTSFQTEGSISVN 193
N+GG E+ + + + ++ SLT + V S + P S T + + N
Sbjct: 14 NNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCKPCSGTTNRNQNRN 73
Query: 194 SERSHVASDN 203
S ASD+
Sbjct: 74 YADSDAASDS 83
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 147 (56.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 283 LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
L V + G HA L+ G+VF+WG G+LGHG + ++P LLE+L + V
Sbjct: 161 LRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAA 220
Query: 343 GEFHTCAVTMAGELYTWG 360
G +H+ V+ G++Y WG
Sbjct: 221 GGWHSVCVSETGDIYIWG 238
Score = 144 (55.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 34/78 (43%), Positives = 43/78 (55%)
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG 385
P LL+ + +CG HT VT GELYTWG G + G LGH S P R+
Sbjct: 293 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHKDSTSSDQPCRVEY 350
Query: 386 PLEG-LQVASVTCGPWHT 402
+E L+V +VTCGPW+T
Sbjct: 351 FVERQLEVRAVTCGPWNT 368
Score = 140 (54.3 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L+V + G H L+ GQ+F++G G G LGHG + PR +E+L GLR VA
Sbjct: 161 LRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAA 220
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
G WH+ V E +G ++ WG + +L
Sbjct: 221 GGWHSVCVSE-----------TGDIYIWGWNESGQL 245
Score = 139 (54.0 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 31/77 (40%), Positives = 41/77 (53%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P + PL G +CG HTA++T TG+L+T+G G +G LGH D + P VE
Sbjct: 293 PALLDLPL-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYF 351
Query: 440 --SGLRTIAVACGVWHT 454
L AV CG W+T
Sbjct: 352 VERQLEVRAVTCGPWNT 368
Score = 136 (52.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
G H + AG++++WG G H G LGHG+ + P+ + L+GL++A V G WH+
Sbjct: 169 GAEHALLLCEAGQVFSWGGGRH--GQLGHGSLEAELEPRLLEA-LQGLRMAEVAAGGWHS 225
Query: 403 ALITSTGQLFTFGDGTFGVL 422
++ TG ++ +G G L
Sbjct: 226 VCVSETGDIYIWGWNESGQL 245
Score = 132 (51.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
P L++ L ++V+ +CG+ H AV+T E+YTWG G G+LGH D P VE
Sbjct: 293 PALLDLPLGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYF 351
Query: 607 KDRH--VKYIACG 617
+R V+ + CG
Sbjct: 352 VERQLEVRAVTCG 364
Score = 126 (49.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 554 LAGE-SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK 612
LA E V ++ GA H +L +V++WG G +G+LGHG +E P L+EAL+ +
Sbjct: 157 LAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMA 216
Query: 613 YIACGSNYSAAI 624
+A G +S +
Sbjct: 217 EVAAGGWHSVCV 228
Score = 123 (48.4 bits), Expect = 0.00038, P = 0.00038
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 272 LLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLES 331
LL PL S+ V +CG RH A+VTR GE++TWG G+LGH QP +E
Sbjct: 295 LLDLPLGSDAV----KASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEY 350
Query: 332 LTMTSVDF--VTCGEFHT 347
++ VTCG ++T
Sbjct: 351 FVERQLEVRAVTCGPWNT 368
Score = 123 (48.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKL 554
P C P + ++ G + L +G VF+ G +GQLG+ + + +L P L+E L
Sbjct: 152 PFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLE-AL 210
Query: 555 AGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
G + E+A G +H ++ ++Y WG +G+L
Sbjct: 211 QGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 245
Score = 93 (37.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 500 PALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKL 554
PAL+D K +CG T +T +G ++T G YGQLG+ ++ PC VE +
Sbjct: 293 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFV 352
Query: 555 AGE-SVEEIACGAYHVAVLTSRNE 577
+ V + CG ++ V E
Sbjct: 353 ERQLEVRAVTCGPWNTYVYAVERE 376
Score = 78 (32.5 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
+P ++ G + +CG HTA +VT++ G+L+TWG G +LGH D
Sbjct: 292 FPALLDLPLGSDAVKASCGSRHTA-----VVTRT------GELYTWGWGKYGQLGHKDST 340
Query: 492 PRLKPTCVPALIDYNFH--KVACG 513
+P V ++ V CG
Sbjct: 341 SSDQPCRVEYFVERQLEVRAVTCG 364
Score = 76 (31.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 236 CDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHA 295
C+A G V+ WG G + + A+ L PR LE+ L + +A G H+
Sbjct: 177 CEA-GQVFSWG---------GGRHGQLGHGSLEAE-LEPRLLEALQGLRMAEVAAGGWHS 225
Query: 296 ALVTRQGEVFTWGEESGGRL 315
V+ G+++ WG G+L
Sbjct: 226 VCVSETGDIYIWGWNESGQL 245
Score = 44 (20.5 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 274 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEES 311
P PL + DV ++ + ALVTR G V G S
Sbjct: 33 PEPLHA--ADDVCQVSASWSYTALVTRGGRVELSGSVS 68
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 189 (71.6 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 314 RLGH--GVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGH 371
R GH +G+ + +++ VD + CG FH+ +T+ G+L+ WG + G LG
Sbjct: 248 RAGHINSLGEIVTTDFTAKTIHRIVVD-IACGNFHSALLTLEGDLFLWGSNQY--GQLGQ 304
Query: 372 GTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD---RK 428
G + +PK + G LE +++ + G HT L+T +FTFG F LGHG +
Sbjct: 305 GDSLDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKN 364
Query: 429 NVSYPREVESLSGLRTIAVACG 450
+ +P +++ + + A G
Sbjct: 365 RLYFPTQIQKPKVMASDIFAAG 386
Score = 187 (70.9 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 70/259 (27%), Positives = 118/259 (45%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGT 363
++TWG+ G H + K P + L ++D ++ G H+ A+ + E WG+
Sbjct: 4 LYTWGKGKTGNTCHNIDKKYPSPPSV--LISLNLDQLSMGPNHSAAI-VNNECLMWGE-- 58
Query: 364 HNAGLLGHG-TDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVL 422
++G T + + KR +V SV+CG HT L+TS ++F+ G G L
Sbjct: 59 ----VMGRKHTTLFKIVWKR--------RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQL 106
Query: 423 GHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDK 482
G + + + P V++LS I + G +AA+ E +G L+ WG
Sbjct: 107 GIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITE-----------AGDLYCWGSSAY 155
Query: 483 NRLGHGDKEPRLK---PTCV--PALID-------YN---FHKVACGHSLTVGLTTSGHVF 527
+LG+G +L PT + P + D Y + + G T+ ++T+G +F
Sbjct: 156 GQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIF 215
Query: 528 TMGSTVYGQLGNPNADGKL 546
+ GS YGQLG + + KL
Sbjct: 216 SWGSNQYGQLGLGHCNAKL 234
Score = 173 (66.0 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHT 347
++CG H L+T + ++F+ G G+LG D P +++L+ +V + G +
Sbjct: 79 VSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVS 138
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHG---TDVSHWIPKRISGPL-----------EGLQVA 393
A+T AG+LY WG + G LG+G + + P I PL + LQ
Sbjct: 139 AAITEAGDLYCWGSSAY--GQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYT 196
Query: 394 SVTCGPWHTALITSTGQLFTFGDGTFGVLG--HGDRKNVSYPREVES 438
++ G HT I++TG +F++G +G LG H + K V P +++
Sbjct: 197 NICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDN 243
Score = 169 (64.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 57/203 (28%), Positives = 92/203 (45%)
Query: 388 EGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG--HGDRKNVSYP----REVESLSG 441
+ LQ ++ G HT I++TG +F++G +G LG H + K V P E +G
Sbjct: 191 QNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAG 250
Query: 442 -LRTIAVACGVWHTAAVVEVIVTQ------SSASVS-SGKLFTWGDGDKNRLGHGDKEPR 493
+ ++ TA + IV SA ++ G LF WG +LG GD +
Sbjct: 251 HINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQ 310
Query: 494 LKPTCVPALIDY-NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK----LPC 548
P V +++ +++A G++ T+ LT VFT GS + QLG+ + GK P
Sbjct: 311 SVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPT 370
Query: 549 LVEDK--LAGESVEEIACGAYHV 569
++ +A + C AY V
Sbjct: 371 QIQKPKVMASDIFAAGDCSAYFV 393
Score = 149 (57.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 44/173 (25%), Positives = 80/173 (46%)
Query: 443 RTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
R ++V+CG HT +++T S K+F+ G +LG + P V L
Sbjct: 75 RVVSVSCGFNHT-----LLLT------SEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTL 123
Query: 503 IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL----PCLVEDKLAGES 558
+N K+ G++++ +T +G ++ GS+ YGQLGN + KL P + + L ++
Sbjct: 124 SKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDA 183
Query: 559 VEE-----------IACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP 600
++ I GA H +++ +++WG G+LG G + P
Sbjct: 184 EKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVP 236
Score = 138 (53.6 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 30/86 (34%), Positives = 46/86 (53%)
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNA-DGKLPCLVEDKLAGESVEEIACGAYH 568
+ACG+ + LT G +F GS YGQLG ++ D +P V+ L + +A G H
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNH 334
Query: 569 VAVLTSRNEVYTWGKGANGRLGHGDV 594
+LT +V+T+G +LGHG +
Sbjct: 335 TILLTKEQDVFTFGSNEFYQLGHGSI 360
Score = 117 (46.2 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 559 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE-ALKDRHVKYIACG 617
V +IACG +H A+LT +++ WG G+LG GD D+ P V+ +L+ + +A G
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALG 331
Query: 618 SNYS 621
+N++
Sbjct: 332 NNHT 335
Score = 94 (38.1 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 270 DVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG---------VG 320
D +P P+++ +V I G +A +T G+++ WG + G+LG+G
Sbjct: 113 DSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTP 172
Query: 321 KDIVQPHLLESLT----MTSVDFVT-C-GEFHTCAVTMAGELYTWGDGTHNAGLLGH 371
I+ P + ++ ++ + C G HT A++ G +++WG + LGH
Sbjct: 173 TTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGH 229
Score = 80 (33.2 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 29/120 (24%), Positives = 49/120 (40%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLG--TRADVLLPRPLESNVV---LDVHHIACGVRH 294
GD+Y WG + + ++ T + L+P + + + L +I G +H
Sbjct: 145 GDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQH 204
Query: 295 AALVTRQGEVFTWGEESGGRLG--HGVGKDIVQP-HLLESLTMTSVDFVTCGEFHTCAVT 351
++ G +F+WG G+LG H K + P HL S + + GE T T
Sbjct: 205 TIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFT 264
Score = 43 (20.2 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 17/80 (21%), Positives = 31/80 (38%)
Query: 958 SNNGTGGLSQFLRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQ--DS 1015
+NN G ++ + +D + N + N+ + E S LQ D+
Sbjct: 1003 NNNEVGNINNINNNNNNNNNSND--INNNSNLIIEKEINNKSQQQQEEETNSPNLQPTDN 1060
Query: 1016 ENGTRPRSPALSVSSHQVEA 1035
N T R P+ S+ S + +
Sbjct: 1061 SNSTNTRPPSSSLLSSVINS 1080
Score = 38 (18.4 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
+L++ + H G S ++G ++SG+ F +GS
Sbjct: 855 SLLNIHQHHSHSG-SGSIGGSSSGNPFVVGS 884
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 144 (55.7 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 37/117 (31%), Positives = 56/117 (47%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
RPL L + G HA L+ G+VF+WG G+LGHG + +P LLE+L
Sbjct: 153 RPLAPT--LRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQG 210
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQ 391
+ V G +H+ ++ G++Y WG + +G L T K +G GL+
Sbjct: 211 LRMAEVAAGGWHSVCLSETGDIYIWG--WNESGQLALPTKSLAEDGKTTAGEASGLE 265
Score = 143 (55.4 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 38/104 (36%), Positives = 52/104 (50%)
Query: 519 GLTTSGHVFTMGSTVYGQLGNPN---ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSR 575
GL G GS G+ G P A P L++ E+V+ ++CG+ H AVLT
Sbjct: 263 GLEEDGSEVKRGSA--GEDGAPAPFIAVQPFPALLDLSPGSEAVK-VSCGSRHTAVLTRT 319
Query: 576 NEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH--VKYIACG 617
E+YTWG G G+LGH D P VE D+ V+ ++CG
Sbjct: 320 GELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCG 363
Score = 140 (54.3 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL--SGLRTIA 446
G + V+CG HTA++T TG+L+T+G G +G LGH D + P VE L+
Sbjct: 300 GSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRT 359
Query: 447 VACGVWHT 454
V+CG W+T
Sbjct: 360 VSCGPWNT 367
Score = 138 (53.6 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 40/105 (38%), Positives = 54/105 (51%)
Query: 309 EESGGRLGHG-VGKD-------IVQPH--LLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
EE G + G G+D VQP LL+ + V+CG HT +T GELYT
Sbjct: 265 EEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYT 324
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEG-LQVASVTCGPWHT 402
WG G + G LGH + P R+ ++ LQV +V+CGPW+T
Sbjct: 325 WGWGKY--GQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNT 367
Score = 137 (53.3 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
G H + AG++++WG G H G LGHGT + P+ + L+GL++A V G WH+
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRH--GQLGHGTLEAEPEPRLLEA-LQGLRMAEVAAGGWHS 223
Query: 403 ALITSTGQLFTFGDGTFGVL 422
++ TG ++ +G G L
Sbjct: 224 VCLSETGDIYIWGWNESGQL 243
Score = 132 (51.5 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L+ + G H L+ + GQ+F++G G G LGHG + PR +E+L GLR VA
Sbjct: 159 LRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAA 218
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
G WH+ + E +G ++ WG + +L
Sbjct: 219 GGWHSVCLSE-----------TGDIYIWGWNESGQL 243
Score = 123 (48.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 565 GAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
GA H +L + +V++WG G +G+LGHG +E P L+EAL+ + +A G +S +
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHS--V 224
Query: 625 CL 626
CL
Sbjct: 225 CL 226
Score = 96 (38.9 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 500 PALIDYN----FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKL 554
PAL+D + KV+CG T LT +G ++T G YGQLG+ + PC VE +
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFV 351
Query: 555 AGE-SVEEIACGAYHVAVLTSRNE 577
+ V ++CG ++ V E
Sbjct: 352 DKQLQVRTVSCGPWNTYVYAVEKE 375
Score = 87 (35.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
+P ++ G + V+CG HTA ++T++ G+L+TWG G +LGH D
Sbjct: 291 FPALLDLSPGSEAVKVSCGSRHTA-----VLTRT------GELYTWGWGKYGQLGHKDTT 339
Query: 492 PRLKPTCVPALIDYNFH--KVACG 513
+P V +D V+CG
Sbjct: 340 TLDRPCRVEYFVDKQLQVRTVSCG 363
Score = 76 (31.8 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
DA G V+ WG AG + + GT PR LE+ L + +A G H+
Sbjct: 175 DAAGQVFSWG---------AGRHGQLGH-GTLEAEPEPRLLEALQGLRMAEVAAGGWHSV 224
Query: 297 LVTRQGEVFTWGEESGGRL 315
++ G+++ WG G+L
Sbjct: 225 CLSETGDIYIWGWNESGQL 243
Score = 45 (20.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/64 (29%), Positives = 23/64 (35%)
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAV--VEVIVTQSSASVSSGKLFT 476
FG G G R+V S LRT + GV +A VT+ SG
Sbjct: 12 FGFCGFGQALGSGLGRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRVQLSGAAGG 71
Query: 477 WGDG 480
DG
Sbjct: 72 TADG 75
Score = 43 (20.2 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 300 RQGEVFTWGEESGGR-LGHGVGKDIVQPHLLESLTMT-SVDFVTCGEFHTCAVTMAGELY 357
R+G F +G G+ LG G+G+ + P L + + V V+ +T VT G +
Sbjct: 5 RRGTWFGFGFCGFGQALGSGLGRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRVQ 64
Query: 358 TWG 360
G
Sbjct: 65 LSG 67
Score = 41 (19.5 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 113 EVWIAG-LKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRD 164
+ W + L L+ +G G +++ W G D L S + ++ +RD
Sbjct: 78 DAWASEELLVLLRAGPGAGAELQAWAPGSAMRGDP--LWSQAVQEAEHGPSRD 128
Score = 41 (19.5 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 266 GTRADVLLPRPLES-NVVLDVHHIACGVRHAALVTRQGEVFTWGEESG 312
G V P PL + L V ++ + A VTR G V G G
Sbjct: 24 GLGRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRVQLSGAAGG 71
Score = 41 (19.5 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 358 TW-GDGTHNAG-LLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQL 411
TW G G G LG G P+ + P L V V+ +TA +T G++
Sbjct: 8 TWFGFGFCGFGQALGSGLGRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRV 63
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 178 (67.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 54/181 (29%), Positives = 90/181 (49%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A GV+H L+T GEV+++G R G V P L +L V V G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPW-RSGP-VEICPSSPILENALVGQYVITVATGSFHSG 104
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS----GPLEGLQVASVTCGPWHTAL 404
AVT G Y WG+ + + + V P I+ PL +++ + CG HT
Sbjct: 105 AVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLA 164
Query: 405 ITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
++ + +++ +G G G++ V+ P++VE L+G + VACG +H+ A+V+ + +
Sbjct: 165 LSISREIWAWGTGCQLGLITTAFP--VTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPS 222
Query: 464 Q 464
Q
Sbjct: 223 Q 223
Score = 163 (62.4 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 65/214 (30%), Positives = 99/214 (46%)
Query: 425 GDRKNVSYPREVESLSGLRTIAVACGV-WHTAAVVEVIVTQSSASVSS--GKLFTWGDGD 481
G + +S P + +S R + A V T + ++ A + S +++TWG G
Sbjct: 477 GGSRRLSLPGLLSQVSP-RLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGK 535
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYN-FHKVACG-HSLTVGLTTSGHVFTMGSTVYGQLGN 539
+ +LGHGD PRL+P CV L H A G HSL LT V++ GS +GQLG+
Sbjct: 536 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLA--LTAKSQVYSWGSNTFGQLGH 593
Query: 540 PNADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGKGANGRLG--HGD--V 594
+ +P L K++ E+ V IA G + L E + G +GR GD
Sbjct: 594 SDFPTTVPRLA--KISSENGVWSIAAGRDYSLFLVD-TEDFQPGLYYSGRQDPTEGDNLP 650
Query: 595 EDR---KTPALVEALKDRHVKYIACGSN-YSAAI 624
E+ KTP L+ K ++ + G + Y A +
Sbjct: 651 ENHSGSKTPVLLSCSKLGYISRVTAGKDSYLALV 684
Score = 133 (51.9 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 40/140 (28%), Positives = 70/140 (50%)
Query: 276 PLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLL---- 329
P+ N ++ V +A G H+ VT G + WGE S G+ + + +P+ +
Sbjct: 82 PILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIAD 141
Query: 330 -ESLTMTSVDFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
E+ + +V + CGE HT A++++ E++ WG G GL+ V+ P+++
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTAFPVTK--PQKVEH- 197
Query: 387 LEGLQVASVTCGPWHT-ALI 405
L G V V CG +H+ AL+
Sbjct: 198 LAGRVVLQVACGAFHSLALV 217
Score = 124 (48.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 570 AVLTS-RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
A+L S R EV+TWGKG G+LGHGDV R P V+ L + V ++ G +S A+
Sbjct: 519 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 578
Query: 629 WVSS 632
V S
Sbjct: 579 QVYS 582
Score = 120 (47.3 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 59/225 (26%), Positives = 93/225 (41%)
Query: 358 TWGDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
T +G+ GL+ S I P+R+ G G V G H L+T G++++FG
Sbjct: 9 TEAEGSKERGLVHIWQAGSFPITPERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG- 66
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFT 476
T S P +L G I VA G +H+ AV + +G +
Sbjct: 67 -TLPWRSGPVEICPSSPILENALVGQYVITVATGSFHSGAVTD-----------NGVAYM 114
Query: 477 WGDGDKNRLGHGDKE--PRLKPTCVP-----ALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
WG+ + +++ P P + L+ ++ACG T+ L+ S ++
Sbjct: 115 WGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAW 174
Query: 530 GSTVYGQLGNPNADGKL--PCLVEDKLAGESVEEIACGAYHVAVL 572
G+ QLG + P VE LAG V ++ACGA+H L
Sbjct: 175 GTGC--QLGLITTAFPVTKPQKVEH-LAGRVVLQVACGAFHSLAL 216
Score = 93 (37.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 403 ALITSTG-QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
AL+ S +++T+G G G LGHGD P V+ L G I + G +H+ A+
Sbjct: 519 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALT--- 575
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
+ ++++WG +LGH D PT VP L
Sbjct: 576 --------AKSQVYSWGSNTFGQLGHSDF-----PTTVPRL 603
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHG 488
Q S +SG++F D R GHG
Sbjct: 1112 QGVYSYASGEVFEGCFQDNMRHGHG 1136
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 178 (67.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 54/181 (29%), Positives = 90/181 (49%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A GV+H L+T GEV+++G R G V P L +L V V G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPW-RSGP-VEICPSSPILENALVGQYVVTVATGSFHSG 104
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS----GPLEGLQVASVTCGPWHTAL 404
AVT G Y WG+ + + + V P I+ PL +++ + CG HT
Sbjct: 105 AVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLA 164
Query: 405 ITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
++ + +++ +G G G++ V+ P++VE L+G + VACG +H+ A+V+ + +
Sbjct: 165 LSISREIWAWGTGCQLGLITTAFP--VTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPS 222
Query: 464 Q 464
Q
Sbjct: 223 Q 223
Score = 162 (62.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 64/214 (29%), Positives = 99/214 (46%)
Query: 425 GDRKNVSYPREVESLSGLRTIAVACGV-WHTAAVVEVIVTQSSASVSS--GKLFTWGDGD 481
G + +S P + +S R + A V T + ++ A + S +++TWG G
Sbjct: 477 GGSRRLSLPGLLSQVSP-RLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGK 535
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYN-FHKVACG-HSLTVGLTTSGHVFTMGSTVYGQLGN 539
+ +LGHGD PRL+P CV L H A G HSL LT V++ GS +GQLG+
Sbjct: 536 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLA--LTAKSQVYSWGSNTFGQLGH 593
Query: 540 PNADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGKGANGRLG--HGD--V 594
+ +P L K++ E+ V +A G + L E + G +GR GD
Sbjct: 594 SDFPTTVPRLA--KISSENGVWSVAAGRDYSLFLVD-TEDFQPGLYYSGRQDPTEGDNLP 650
Query: 595 EDR---KTPALVEALKDRHVKYIACGSN-YSAAI 624
E+ KTP L+ K ++ + G + Y A +
Sbjct: 651 ENHSGSKTPVLLSCSKLGYISRVTAGKDSYLALV 684
Score = 133 (51.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 40/140 (28%), Positives = 70/140 (50%)
Query: 276 PLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLL---- 329
P+ N ++ V +A G H+ VT G + WGE S G+ + + +P+ +
Sbjct: 82 PILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIAD 141
Query: 330 -ESLTMTSVDFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
E+ + +V + CGE HT A++++ E++ WG G GL+ V+ P+++
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTAFPVTK--PQKVEH- 197
Query: 387 LEGLQVASVTCGPWHT-ALI 405
L G V V CG +H+ AL+
Sbjct: 198 LAGRVVLQVACGAFHSLALV 217
Score = 124 (48.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 570 AVLTS-RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
A+L S R EV+TWGKG G+LGHGDV R P V+ L + V ++ G +S A+
Sbjct: 519 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 578
Query: 629 WVSS 632
V S
Sbjct: 579 QVYS 582
Score = 119 (46.9 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 58/225 (25%), Positives = 93/225 (41%)
Query: 358 TWGDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
T +G+ GL+ S I P+R+ G G V G H L+T G++++FG
Sbjct: 9 TEAEGSKERGLVHIWQAGSFPITPERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG- 66
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFT 476
T S P +L G + VA G +H+ AV + +G +
Sbjct: 67 -TLPWRSGPVEICPSSPILENALVGQYVVTVATGSFHSGAVTD-----------NGVAYM 114
Query: 477 WGDGDKNRLGHGDKE--PRLKPTCVP-----ALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
WG+ + +++ P P + L+ ++ACG T+ L+ S ++
Sbjct: 115 WGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAW 174
Query: 530 GSTVYGQLGNPNADGKL--PCLVEDKLAGESVEEIACGAYHVAVL 572
G+ QLG + P VE LAG V ++ACGA+H L
Sbjct: 175 GTGC--QLGLITTAFPVTKPQKVEH-LAGRVVLQVACGAFHSLAL 216
Score = 94 (38.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 38/146 (26%), Positives = 59/146 (40%)
Query: 403 ALITSTG-QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
AL+ S +++T+G G G LGHGD P V+ L G I + G +H+ A+
Sbjct: 519 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALT--- 575
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
+ ++++WG +LGH D P P + VA G ++ L
Sbjct: 576 --------AKSQVYSWGSNTFGQLGHSDF-PTTVPRLAKISSENGVWSVAAGRDYSLFLV 626
Query: 522 TSGHVFTMGSTVYGQLGNPNADGKLP 547
+ F G Y +P LP
Sbjct: 627 DTED-FQPG-LYYSGRQDPTEGDNLP 650
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHG 488
Q S +SG++F D R GHG
Sbjct: 1112 QGVYSYASGEVFEGCFQDNMRHGHG 1136
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 188 (71.2 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 53/181 (29%), Positives = 89/181 (49%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A GV+H L+T GEV+++G + P L +L V V G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPWKSEAAEICPS--SPLLESALVGHHVVTVATGSFHSG 104
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS----GPLEGLQVASVTCGPWHTAL 404
AVT +G +Y WG+ + + VS P IS PL +++ + CG HT
Sbjct: 105 AVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEHTLA 164
Query: 405 ITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
++ + +++ +G G G++ V+ P++VE L+G + VACG +H+ A+V+ +
Sbjct: 165 LSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPP 222
Query: 464 Q 464
Q
Sbjct: 223 Q 223
Score = 162 (62.1 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 60/212 (28%), Positives = 96/212 (45%)
Query: 425 GDRKNVSYPREVESLSGLRTIAVACGV-WHTAAVVEVIVTQSSASVSS--GKLFTWGDGD 481
G + +S P + +S R + A V T + ++ A + S +++TWG G
Sbjct: 471 GGSRRLSLPGLLSQVSP-RLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGK 529
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN 541
+ +LGHGD PRL+P CV L + G S ++ LT V++ GS +GQLG+
Sbjct: 530 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSE 589
Query: 542 ADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGKGANGRL--GHGDV--ED 596
+P L K++ ES V +A G + L E + G +GR GD E+
Sbjct: 590 FPTTVPRL--SKVSSESGVWSVAAGHGYSLFLVD-TEDFQPGLYYSGRQDRAEGDTLPEN 646
Query: 597 RK---TPALVEALKDRHVKYIACGSN-YSAAI 624
TP L+ K ++ + G + Y A +
Sbjct: 647 PSGTTTPVLLSCSKLGYISRVTAGKDSYLALV 678
Score = 138 (53.6 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 42/148 (28%), Positives = 74/148 (50%)
Query: 269 ADVLLPRPLESNVVLDVHHI---ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
A++ PL + ++ HH+ A G H+ VT G V+ WGE + G+ + + +
Sbjct: 75 AEICPSSPLLESALVG-HHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSE 133
Query: 326 PHLL-----ESLTMTSVDFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHW 378
P + E+ + +V + CGE HT A++++ E++ WG G GL+ V+
Sbjct: 134 PSPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTTFPVTK- 191
Query: 379 IPKRISGPLEGLQVASVTCGPWHT-ALI 405
P+++ L G V V CG +H+ AL+
Sbjct: 192 -PQKVEH-LAGRVVLQVACGAFHSLALV 217
Score = 128 (50.1 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 52/200 (26%), Positives = 83/200 (41%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESL 439
P+R+ G G V G H L+T G++++FG T S P +L
Sbjct: 32 PERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG--TLPWKSEAAEICPSSPLLESAL 88
Query: 440 SGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 499
G + VA G +H+ AV E SG ++ WG+ + +++ +P+ V
Sbjct: 89 VGHHVVTVATGSFHSGAVTE-----------SGVVYMWGENAAGQCAVANQQYVSEPSPV 137
Query: 500 PA-------LIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED 552
L+ ++ACG T+ L+ S ++ G+ L P VE
Sbjct: 138 SISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQKVEH 197
Query: 553 KLAGESVEEIACGAYHVAVL 572
LAG V ++ACGA+H L
Sbjct: 198 -LAGRVVLQVACGAFHSLAL 216
Score = 127 (49.8 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 570 AVLTS-RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
A+L S R EV+TWGKG G+LGHGDV R P V+ L + V ++ G ++S A+
Sbjct: 513 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS 572
Query: 629 WVSS 632
V S
Sbjct: 573 QVYS 576
Score = 101 (40.6 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 34/114 (29%), Positives = 53/114 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVH--HIACGVRHAAL 297
G VY+WGE N A N Y+ + V + E++ +L V +ACG H
Sbjct: 110 GVVYMWGE----NAAGQCAVANQQYVSEPSPVSISDS-ETSPLLAVRILQLACGEEHTLA 164
Query: 298 VTRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
++ E++ WG +G +LG + +P +E L V V CG FH+ A+
Sbjct: 165 LSISREIWAWG--TGCQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 89 (36.4 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 32/119 (26%), Positives = 51/119 (42%)
Query: 403 ALITSTG-QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
AL+ S +++T+G G G LGHGD P V+ L G I + G H+ A+
Sbjct: 513 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALT--- 569
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGL 520
+ ++++WG +LGH + P P + VA GH ++ L
Sbjct: 570 --------AKSQVYSWGSNTFGQLGHSEF-PTTVPRLSKVSSESGVWSVAAGHGYSLFL 619
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 697 SEASNRRNSLPRLSGENKDRL 717
SE +RR SLP L + RL
Sbjct: 469 SEGGSRRLSLPGLLSQVSPRL 489
Score = 38 (18.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHG 488
Q S +SG++F D R GHG
Sbjct: 1106 QGVYSYASGEVFEGCFQDNMRHGHG 1130
Score = 37 (18.1 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 995 ANSSCVSESSEGKESMPLQDSENGTRPRSPALSVSS 1030
A S V ++ G PL + + + P +S S+
Sbjct: 993 AISQAVDQALRGTSDFPLYGGSSTVQRQEPPISRSA 1028
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 235 (87.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 101/381 (26%), Positives = 166/381 (43%)
Query: 275 RPLESNVVLDVHHI---ACGVRHAALVTRQGEVF-TWGE--ESGGRLG-HGVGKD----- 322
+P+ + LD H I ACG L ++ +V WG +LG H KD
Sbjct: 94 QPVPYRLELD-HKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGY 152
Query: 323 --IVQPHL----LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN-AGLLGHGTDV 375
+++P L+ T V V+CG H+ +T +++ G+ +H G +V
Sbjct: 153 EYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEV 212
Query: 376 ---SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY 432
SH + R+ +G QV V CG H+ +T G++++ G G G G G S
Sbjct: 213 YSESHKV-HRMQD-FDG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITST 269
Query: 433 PREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
P ++ L+G+ + VA + + A + G +F WG+ + +L
Sbjct: 270 PSKLGGDLAGVTVVQVA--TYGDCCL---------ALSADGGVFGWGNSEYLQLASVTDS 318
Query: 492 PRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLV 550
++ P C+P +VACG + L GHVF G + G+ G + +P ++
Sbjct: 319 TQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGK-GPKLLETAIPEMI 377
Query: 551 EDKLAGES-------VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV 603
L G + V +I CG H A LT++ E++ WGK G LG G +ED+ P V
Sbjct: 378 PPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV 437
Query: 604 EALKDRHVKYIACGSNYSAAI 624
+ V +ACG ++ +
Sbjct: 438 -TMPGEPVD-VACGVDHMVTL 456
Score = 229 (85.7 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 94/318 (29%), Positives = 143/318 (44%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV-----QPH 327
+P PL+ V ++CG H+ ++T + VF+ G S G+ G V +D V + H
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVH 220
Query: 328 LLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 387
++ V V CG+ H+ +T GE+Y+ G G LGH S P ++ G L
Sbjct: 221 RMQDFDGQVVQ-VVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS--TPSKLGGDL 277
Query: 388 EGLQVASV-TCGPWHTALITSTGQLFTFGDGTFGVLGH-GDRKNVSYPREVESLSGLRTI 445
G+ V V T G AL ++ G +F +G+ + L D V+ PR + SG+ +
Sbjct: 278 AGVTVVQVATYGDCCLAL-SADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKV 335
Query: 446 A-VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK--E---PRLKPTCV 499
VACG AV+ + G +F WG G LG G K E P + P +
Sbjct: 336 KQVACG-GTGCAVLN----------AEGHVFVWGYGI---LGKGPKLLETAIPEMIPPTL 381
Query: 500 PALIDYN----FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKL 554
L ++N ++ CG S LT G +F G + G LG + + P V +
Sbjct: 382 FGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVT--M 439
Query: 555 AGESVEEIACGAYHVAVL 572
GE V+ +ACG H+ L
Sbjct: 440 PGEPVD-VACGVDHMVTL 456
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 51/170 (30%), Positives = 75/170 (44%)
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMA-GE 355
++ G VF WG +L V P L + V V CG CAV A G
Sbjct: 295 LSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTG-CAVLNAEGH 353
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE---GLQVASVTCGPWHTALITSTGQLF 412
++ WG G G T + IP + G E +QV+ + CG H A +T+ G+LF
Sbjct: 354 VFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELF 413
Query: 413 TFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
+G G LG G ++ +P V ++ G + VACGV H + + +
Sbjct: 414 VWGKNIRGCLGIGRLEDQYFPWRV-TMPG-EPVDVACGVDHMVTLAKSFI 461
Score = 139 (54.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 44/144 (30%), Positives = 63/144 (43%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEE---SGGRLGHGVGKDIVQPH 327
V +PR L + V V +ACG A++ +G VF WG G +L +++ P
Sbjct: 321 VNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPT 380
Query: 328 LL---ESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
L E V + CG H A+T GEL+ WG G LG G + P R++
Sbjct: 381 LFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIR--GCLGIGRLEDQYFPWRVT 438
Query: 385 GPLEGLQVASVTCGPWHTALITST 408
P E + VA CG H + +
Sbjct: 439 MPGEPVDVA---CGVDHMVTLAKS 459
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 235 (87.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 104/382 (27%), Positives = 166/382 (43%)
Query: 275 RPLESNVVLD--VHHIACGVRHAALVTRQGEVF-TWGE--ESGGRLG-HGVGKD------ 322
+P+ + LD + ACG L ++ ++ WG +LG H KD
Sbjct: 97 QPVPYRLELDQKISSAACGYGFTLLSSKTKDITKVWGMGLNKDSQLGFHRSRKDKTRGYE 156
Query: 323 -IVQPHL----LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHN-AGLLGHGTDV- 375
+++P L+ T V V+CG H+ +T +++ G+ ++ G ++
Sbjct: 157 YVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIY 216
Query: 376 --SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
SH + R+ +G QV V CG H+ +T G++++ G G G G G S P
Sbjct: 217 SESHRV-HRMQD-FDG-QVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTP 273
Query: 434 REVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP 492
++ L+G+ + VA + + V SA G LF WG+ + +L
Sbjct: 274 TKLGGDLAGVNVVQVAT---YGDCCLAV-----SAD---GGLFGWGNSEYLQLASVTDST 322
Query: 493 RLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNA-DGKLPCL 549
++ P C+P + ACG + L GHVF G YG LG PN + LP +
Sbjct: 323 QVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLLETALPEM 379
Query: 550 VEDKLAGES-------VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPAL 602
+ L G S V I CG H A LT+R E++ WGK G LG G +ED+ P
Sbjct: 380 IPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWR 439
Query: 603 VEALKDRHVKYIACGSNYSAAI 624
V + + +ACG ++ +
Sbjct: 440 V-TMPGEPMD-VACGVDHMVTL 459
Score = 207 (77.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 91/319 (28%), Positives = 141/319 (44%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGE-VFTWGEESGGRLGHGVGKDIV-----QP 326
+P PL+ V ++CG H+ ++T GE VF+ G S G+ G V ++ + +
Sbjct: 164 VPLPLDRPQETRVLQVSCGRAHSLVLT-DGEGVFSMGNNSYGQCGRKVVENEIYSESHRV 222
Query: 327 HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
H ++ V V CG+ H+ +T GE+Y+ G G LGH S P ++ G
Sbjct: 223 HRMQDFDGQVVQ-VACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITS--TPTKLGGD 279
Query: 387 LEGLQVASV-TCGPWHTALITSTGQLFTFGDGTFGVLGH-GDRKNVSYPREVESLSGLRT 444
L G+ V V T G A +++ G LF +G+ + L D V+ PR + SG+
Sbjct: 280 LAGVNVVQVATYGDCCLA-VSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQ 337
Query: 445 IA-VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK--E---PRLKPTC 498
+ ACG AV+ G +F WG G LG G E P + P
Sbjct: 338 VKQAACG-GTGCAVLN----------GEGHVFVWGYGI---LGKGPNLLETALPEMIPPT 383
Query: 499 VPALIDYN----FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDK 553
+ L ++N ++ CG S LT G +F G + G LG + + P V
Sbjct: 384 LFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVT-- 441
Query: 554 LAGESVEEIACGAYHVAVL 572
+ GE ++ +ACG H+ L
Sbjct: 442 MPGEPMD-VACGVDHMVTL 459
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 46/140 (32%), Positives = 61/140 (43%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG------KDIV 324
V +PR L + V V ACG A++ +G VF WG G LG G +++
Sbjct: 324 VNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGY---GILGKGPNLLETALPEMI 380
Query: 325 QPHLL---ESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPK 381
P L E V + CG H A+T GEL+ WG G LG G + P
Sbjct: 381 PPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIR--GCLGIGRLEDQYFPW 438
Query: 382 RISGPLEGLQVASVTCGPWH 401
R++ P E + VA CG H
Sbjct: 439 RVTMPGEPMDVA---CGVDH 455
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 175 (66.7 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 55/190 (28%), Positives = 91/190 (47%)
Query: 285 VHHIACGVRHAALVTR-----QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDF 339
V H A GV+H L+T GEV+++G P L +L V
Sbjct: 43 VLHAALGVKHGVLLTEVFKPSDGEVYSFGTLPWR--SEPAETCPSNPILESALVGQYVVT 100
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS----GPLEGLQVASV 395
V G FHT AVT +G +Y WG+ + + + V P IS PL +++ +
Sbjct: 101 VATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQL 160
Query: 396 TCGPWHTALITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHT 454
CG HT ++ + +++ +G G G++ V+ P++VE L+G + VACG +H+
Sbjct: 161 ACGEEHTLALSLSREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHS 218
Query: 455 AAVVEVIVTQ 464
A+V+ + +Q
Sbjct: 219 LALVQCLPSQ 228
Score = 158 (60.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 64/214 (29%), Positives = 98/214 (45%)
Query: 425 GDRKNVSYPREVESLSGLRTIAVACGV-WHTAAVVEVIVTQSSASVSS--GKLFTWGDGD 481
G + +S P + +S R + A V T + ++ A + S +++TWG G
Sbjct: 481 GGSRRLSLPGLLSQVSP-RLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGK 539
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYN-FHKVACG-HSLTVGLTTSGHVFTMGSTVYGQLGN 539
+ +LGHGD PRL+P CV L H A G HSL LT V++ GS +GQLG+
Sbjct: 540 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLA--LTAKSQVYSWGSNTFGQLGH 597
Query: 540 PNADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGKGANGRLG--HGD--V 594
+ +P L K+ E+ V +A G + L E + G +GRL GD
Sbjct: 598 SDFPTTVPRLA--KVNSENGVWSVAAGQDYSLFLVD-TEDFQPGLCYSGRLDPTEGDNLP 654
Query: 595 EDR---KTPALVEALKDRHVKYIACGSN-YSAAI 624
E+ K P L+ K ++ + G + Y A +
Sbjct: 655 ENHSGTKMPVLLSCSKLGYISRVTAGKDSYLALV 688
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 56/179 (31%), Positives = 84/179 (46%)
Query: 324 VQPHLLESL----TMTSVDFVT-CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHW 378
V P LL T T V T GE ++ E++TWG G G LGHG +
Sbjct: 495 VSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKE--GQLGHGDVLPRL 552
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR--EV 436
P + L+G +V + G +H+ +T+ Q++++G TFG LGH D + PR +V
Sbjct: 553 QPLCVKC-LDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPT-TVPRLAKV 610
Query: 437 ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGH-GDKEPRL 494
S +G+ + VA G ++ +V+ Q S G+L +GD H G K P L
Sbjct: 611 NSENGVWS--VAAGQDYSLFLVDTEDFQPGLCYS-GRLDPT-EGDNLPENHSGTKMPVL 665
Score = 124 (48.7 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 570 AVLTS-RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
A+L S R EV+TWGKG G+LGHGDV R P V+ L + V ++ G +S A+
Sbjct: 523 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 582
Query: 629 WVSS 632
V S
Sbjct: 583 QVYS 586
Score = 117 (46.2 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 55/206 (26%), Positives = 84/206 (40%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDG---TFGVLGHGDRKNVSYPRE- 435
P+R+ G G V G H L+T ++F DG +FG L + P
Sbjct: 32 PERLPG-WGGKTVLHAALGVKHGVLLT---EVFKPSDGEVYSFGTLPWRSEPAETCPSNP 87
Query: 436 -VES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-- 491
+ES L G + VA G +HT AV + SG ++ WG+ + ++
Sbjct: 88 ILESALVGQYVVTVATGSFHTGAVTD-----------SGVVYMWGENSAGQCAVANQPYV 136
Query: 492 PRLKPTCVP-----ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL 546
P P + L+ ++ACG T+ L+ S ++ G+ L
Sbjct: 137 PEPNPVSISDSETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGCQLGLITTTFPVTK 196
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVL 572
P VE LAG V ++ACGA+H L
Sbjct: 197 PQKVEH-LAGRVVLQVACGAFHSLAL 221
Score = 93 (37.8 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 34/114 (29%), Positives = 52/114 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVH--HIACGVRHAAL 297
G VY+WGE N A N Y+ V + E++ +L V +ACG H
Sbjct: 115 GVVYMWGE----NSAGQCAVANQPYVPEPNPVSISDS-ETSPLLAVRILQLACGEEHTLA 169
Query: 298 VTRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
++ E++ WG +G +LG + +P +E L V V CG FH+ A+
Sbjct: 170 LSLSREIWAWG--TGCQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 221
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 697 SEASNRRNSLPRLSGENKDRL 717
SE +RR SLP L + RL
Sbjct: 479 SEGGSRRLSLPGLLSQVSPRL 499
Score = 38 (18.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHG 488
Q S +SG++F D R GHG
Sbjct: 1116 QGVYSYASGEVFEGCFQDNMRHGHG 1140
Score = 38 (18.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 1083 EKVYERYNVRGLDKSSASGQAARRPEG 1109
+KV YN + + +G ++ PEG
Sbjct: 423 KKVMNFYNTAPCEPGALAGSSSIGPEG 449
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 170 (64.9 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 51/181 (28%), Positives = 87/181 (48%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A GV+H L+T GEV+++G + P L +L V V G FH
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPWRSEPAEICPSC--PILENALIGQFVVTVASGSFHNG 104
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS----GPLEGLQVASVTCGPWHTAL 404
AVT +G Y WG+ + + + V P IS L +++ + CG HT
Sbjct: 105 AVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEEHTLA 164
Query: 405 ITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
++ + +++ +G G G++ V+ P++VE L+G + VACG +H+ A+V+ + +
Sbjct: 165 LSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPS 222
Query: 464 Q 464
Q
Sbjct: 223 Q 223
Score = 157 (60.3 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 59/212 (27%), Positives = 97/212 (45%)
Query: 425 GDRKNVSYPREVESLSGLRTIAVACGV-WHTAAVVEVIVTQSSASVSS--GKLFTWGDGD 481
G + +S P + +S R + A V T + ++ A + S +++TWG G
Sbjct: 476 GGSRRLSLPGLLSQVSP-RLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGK 534
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN 541
+ +LGHGD PRL+P CV L + G ++ LT V++ GS +GQLG+ +
Sbjct: 535 EGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYD 594
Query: 542 ADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGKGANGRL--GHGD--VED 596
+P L K++ E+ V +A G + L E + G +GR GD E+
Sbjct: 595 FPTTVPRLA--KVSSENGVWSVAAGQDYSLFLVD-TEDFQPGLYYSGRQDPAEGDNLPEN 651
Query: 597 R---KTPALVEALKDRHVKYIACGSN-YSAAI 624
KTP L+ K ++ + G + Y A +
Sbjct: 652 HSGTKTPVLLSCSKLGYISRVTAGKDSYLALV 683
Score = 134 (52.2 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 41/147 (27%), Positives = 73/147 (49%)
Query: 269 ADVLLPRPLESNVVLD--VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQP 326
A++ P+ N ++ V +A G H VT G + WGE S G+ + + +P
Sbjct: 75 AEICPSCPILENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEP 134
Query: 327 HLL-----ESLTMTSVDFV--TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI 379
+ + E+ ++ +V + CGE HT A++++ E++ WG G GL+ V+
Sbjct: 135 NPVSISDSETSSLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTTFPVTK-- 191
Query: 380 PKRISGPLEGLQVASVTCGPWHT-ALI 405
P+++ L G V V CG +H+ AL+
Sbjct: 192 PQKVEH-LAGRVVLQVACGAFHSLALV 217
Score = 132 (51.5 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 57/223 (25%), Positives = 91/223 (40%)
Query: 358 TWGDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
T +G+ GL+ S+ + P+R+ G G V G H L+T G++++FG
Sbjct: 9 TEAEGSKERGLVHVWQAGSYSVTPERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG- 66
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFT 476
T S P +L G + VA G +H AV E SG +
Sbjct: 67 -TLPWRSEPAEICPSCPILENALIGQFVVTVASGSFHNGAVTE-----------SGVAYM 114
Query: 477 WGDGDKNRLGHGDKE--PRLKPTCVP-----ALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
WG+ + +++ P P + +L+ ++ACG T+ L+ S ++
Sbjct: 115 WGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEEHTLALSISREIWAW 174
Query: 530 GSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVL 572
G+ L P VE LAG V ++ACGA+H L
Sbjct: 175 GTGCQLGLITTTFPVTKPQKVEH-LAGRVVLQVACGAFHSLAL 216
Score = 129 (50.5 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 570 AVLTS-RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
A+L S R EV+TWGKG G+LGHGDV R P V+ L + V Y+ G +S A+
Sbjct: 518 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKS 577
Query: 629 WVSS 632
V S
Sbjct: 578 QVYS 581
Score = 100 (40.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 53/208 (25%), Positives = 84/208 (40%)
Query: 320 GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI 379
G V P L +V G H +T GE+Y++G + ++
Sbjct: 26 GSYSVTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRS----EPAEICPSC 81
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR----- 434
P + L G V +V G +H +T +G + +G+ + G +++ V P
Sbjct: 82 PI-LENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSIS 140
Query: 435 --EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP 492
E SL +R + +ACG HT A+ S+S +++ WG G + L P
Sbjct: 141 DSETSSLLAVRILQLACGEEHTLAL----------SISR-EIWAWGTGCQLGL-ITTTFP 188
Query: 493 RLKPTCVPALIDYNFHKVACG--HSLTV 518
KP V L +VACG HSL +
Sbjct: 189 VTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 90 (36.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 403 ALITSTG-QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
AL+ S +++T+G G G LGHGD P V+ L G I + G +H+ A+
Sbjct: 518 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALT--- 574
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
+ ++++WG +LGH D PT VP L
Sbjct: 575 --------AKSQVYSWGSNTFGQLGHYDF-----PTTVPRL 602
Score = 45 (20.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 948 LAFPTGVDSVSNNGTGGLS--QFLRETT---GASGRDDQPVIRLPNGSVGVLANSSCVSE 1002
+A T V +V G +S Q + TT A P + N + L++ S
Sbjct: 300 VATDTNVGNVQTTGGDAISSQQEIMGTTEIPSAQNIPSYPDTQAVNEYMQKLSDHSVRDN 359
Query: 1003 SSEGKESMPLQ 1013
S GK+ MP Q
Sbjct: 360 SENGKKPMPSQ 370
Score = 39 (18.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 697 SEASNRRNSLPRLSGENKDRL 717
SE +RR SLP L + RL
Sbjct: 474 SEGGSRRLSLPGLLSQVSPRL 494
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHG 488
Q S +SG++F D R GHG
Sbjct: 1111 QGVYSYASGEVFEGCFQDNMRHGHG 1135
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 234 (87.4 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 62/188 (32%), Positives = 99/188 (52%)
Query: 284 DVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG----KDIVQPHLLESLTMTS--- 336
D I G H L+ G +++WG G LGHGVG ++I P + + T+ +
Sbjct: 246 DFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNES 305
Query: 337 --VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD--VSHWIPKRISGPLE---G 389
VD + CG +H+ +T E+YT+G G G LGHG + ++H+IPKRI + G
Sbjct: 306 RIVD-IACGGYHSMFLTNDNEIYTFGYGEF--GQLGHGENDTLNHYIPKRIKSTGDNAAG 362
Query: 390 LQVASVTCGPWHTAL-ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVA 448
++ S+ G + IT+ G ++++G G LGHG +N P++++SLS ++ I
Sbjct: 363 NKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNIKKIT-- 420
Query: 449 CGVWHTAA 456
G HT A
Sbjct: 421 SGFKHTLA 428
Score = 212 (79.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 58/210 (27%), Positives = 98/210 (46%)
Query: 338 DF--VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT---DVSH-WIPKRISG-PLEGL 390
DF + G H + G LY+WG+G G LGHG D + + PK+I+ L
Sbjct: 246 DFKKICSGSDHNLLLGNDGSLYSWGNGYF--GALGHGVGSNDKENIYTPKKITTFTLNNN 303
Query: 391 Q--VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSY--PREVESLSGLRTIA 446
+ + + CG +H+ +T+ +++TFG G FG LGHG+ +++ P+ ++S T
Sbjct: 304 ESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKS-----TGD 358
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 506
A G ++ S + G +++WG D LGHG E P + +L N
Sbjct: 359 NAAGN-KIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLS--N 415
Query: 507 FHKVACGHSLTVGLTTSGHVFTMGSTVYGQ 536
K+ G T+ + + ++ G +GQ
Sbjct: 416 IKKITSGFKHTLAQSINNDIYVFGDNTFGQ 445
Score = 184 (69.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 54/191 (28%), Positives = 90/191 (47%)
Query: 240 GDVYIWGEVICDNVVKA-GA-DKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
G +Y WG + G+ DK Y + ES +V IACG H+
Sbjct: 264 GSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIV----DIACGGYHSMF 319
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS-------VDFVTCGEF-HTCA 349
+T E++T+G G+LGHG D + ++ + + T + + G+ ++
Sbjct: 320 LTNDNEIYTFGYGEFGQLGHGEN-DTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFY 378
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTG 409
+T G +Y+WG ++ G LGHGT+ +H+ PK+I L ++ +T G HT +
Sbjct: 379 ITTDGSVYSWG--WNDGGSLGHGTNENHYSPKKIQS-LSNIK--KITSGFKHTLAQSINN 433
Query: 410 QLFTFGDGTFG 420
++ FGD TFG
Sbjct: 434 DIYVFGDNTFG 444
Score = 176 (67.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 470 SSGKLFTWGDGDKNRLGHG----DKEPRLKPTCVPAL-IDYNFHKV---ACGHSLTVGLT 521
+ G L++WG+G LGHG DKE P + ++ N ++ ACG ++ LT
Sbjct: 262 NDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLT 321
Query: 522 TSGHVFTMGSTVYGQLG---NPNADGKLPCLVE---DKLAGESVEEIACGAY-HVAVLTS 574
++T G +GQLG N + +P ++ D AG ++ I G + + +T+
Sbjct: 322 NDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITT 381
Query: 575 RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
VY+WG G LGHG E+ +P +++L + +K I G ++ A
Sbjct: 382 DGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSN--IKKITSGFKHTLA 428
Score = 166 (63.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 53/211 (25%), Positives = 104/211 (49%)
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHG----DRKNVSYPREVESLS----GLRTIA 446
+ G H L+ + G L+++G+G FG LGHG D++N+ P+++ + + R +
Sbjct: 250 ICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVD 309
Query: 447 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE------P-RLKPTCV 499
+ACG +H+ + +T + +++T+G G+ +LGHG+ + P R+K T
Sbjct: 310 IACGGYHS-----MFLTNDN------EIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGD 358
Query: 500 PALIDYNFHKVACG-HSLTVGLTTSGHVFTMGSTVYGQLGN-PNADGKLPCLVEDKLAGE 557
A + + G H+ + +TT G V++ G G LG+ N + P ++
Sbjct: 359 NAAGN-KIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSL---S 414
Query: 558 SVEEIACGAYHVAVLTSRNEVYTWGKGANGR 588
++++I G H + N++Y +G G+
Sbjct: 415 NIKKITSGFKHTLAQSINNDIYVFGDNTFGQ 445
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 506 NFHKVACG--HSLTVGLTTSGHVFTMGSTVYGQLGNP-NADGKLPCLVEDKLA------G 556
+F K+ G H+L +G G +++ G+ +G LG+ ++ K K+
Sbjct: 246 DFKKICSGSDHNLLLG--NDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNN 303
Query: 557 ES-VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGD 593
ES + +IACG YH LT+ NE+YT+G G G+LGHG+
Sbjct: 304 ESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGE 341
Score = 54 (24.1 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLG 316
I G H+ +VT+ ++ WG +LG
Sbjct: 181 IVSGYEHSLVVTKDDGIYGWGRNHKNQLG 209
Score = 41 (19.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 372 GTDVSHWIPK-RISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
GT+ +I + + L GL+ + +H+ +I + + +G
Sbjct: 53 GTEEFEFISETELPIKLNGLKAKDIFANAYHSGIINENDEFYHWG 97
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 143 (55.4 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
G H + AG++++WG G H G LGHGT + P+ + L+GL++A V G WH+
Sbjct: 169 GAEHVLLLCAAGQVFSWGAGRH--GQLGHGTLEAELEPRLLEA-LQGLRMAKVAAGGWHS 225
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGL 442
++ TG ++ +G G L R E E + L
Sbjct: 226 VCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATEL 265
Score = 142 (55.0 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 283 LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
L V + G H L+ G+VF+WG G+LGHG + ++P LLE+L + V
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 343 GEFHTCAVTMAGELYTWG 360
G +H+ ++ G++Y WG
Sbjct: 221 GGWHSVCLSETGDIYIWG 238
Score = 138 (53.6 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 365 NAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH 424
+AG H + + P + PL G +CG HTA++T TG+L+T+G G +G LGH
Sbjct: 278 DAGAPAHFIAIQPF-PALLDLPL-GSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGH 335
Query: 425 GDRKNVSYPREVESL--SGLRTIAVACGVWHT 454
D ++ P VE L AV CG W+T
Sbjct: 336 KDSTSLDRPCCVEYFVERQLEVRAVTCGPWNT 367
Score = 137 (53.3 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 33/78 (42%), Positives = 42/78 (53%)
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG 385
P LL+ + +CG HT VT GELYTWG G + G LGH S P +
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKY--GQLGHKDSTSLDRPCCVEY 349
Query: 386 PLEG-LQVASVTCGPWHT 402
+E L+V +VTCGPW+T
Sbjct: 350 FVERQLEVRAVTCGPWNT 367
Score = 136 (52.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L+V + G H L+ + GQ+F++G G G LGHG + PR +E+L GLR VA
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRL 485
G WH+ + E +G ++ WG + +L
Sbjct: 221 GGWHSVCLSE-----------TGDIYIWGWNESGQL 245
Score = 133 (51.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 554 LAGE-SVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK 612
LA E V ++ GA HV +L + +V++WG G +G+LGHG +E P L+EAL+ +
Sbjct: 157 LAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMA 216
Query: 613 YIACGSNYSAAICL 626
+A G +S +CL
Sbjct: 217 KVAAGGWHS--VCL 228
Score = 129 (50.5 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
P L++ L ++V +CG+ H AV+T E+YTWG G G+LGH D P VE
Sbjct: 292 PALLDLPLGSDAVMA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYF 350
Query: 607 KDRH--VKYIACG 617
+R V+ + CG
Sbjct: 351 VERQLEVRAVTCG 363
Score = 129 (50.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 272 LLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLES 331
LL PL S+ V+ +CG RH A+VTR GE++TWG G+LGH + +P +E
Sbjct: 294 LLDLPLGSDAVM----ASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEY 349
Query: 332 LTMTSVDF--VTCGEFHTCAVTM 352
++ VTCG ++T M
Sbjct: 350 FVERQLEVRAVTCGPWNTYVYAM 372
Score = 123 (48.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
++G++F+WG G +LGHG E L+P + AL KVA G +V L+ +G ++
Sbjct: 178 AAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIW 237
Query: 530 GSTVYGQLGNPNADGKLPCLVEDKLAGESVEEI 562
G GQL P G E+K E E+
Sbjct: 238 GWNESGQLALPTRSG-----TENKAEREEATEL 265
Score = 123 (48.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 496 PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL-PCLVEDKL 554
P C P + ++ G + L +G VF+ G+ +GQLG+ + +L P L+E L
Sbjct: 152 PFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE-AL 210
Query: 555 AGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
G + ++A G +H L+ ++Y WG +G+L
Sbjct: 211 QGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQL 245
Score = 90 (36.7 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE 491
+P ++ G + +CG HTA +VT++ G+L+TWG G +LGH D
Sbjct: 291 FPALLDLPLGSDAVMASCGSRHTA-----VVTRT------GELYTWGWGKYGQLGHKDST 339
Query: 492 PRLKPTCVPALIDYNFH--KVACG 513
+P CV ++ V CG
Sbjct: 340 SLDRPCCVEYFVERQLEVRAVTCG 363
Score = 86 (35.3 bits), Expect = 9.1e-11, Sum P(3) = 9.1e-11
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 500 PALIDYNFHKVA----CGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKL 554
PAL+D A CG T +T +G ++T G YGQLG+ ++ PC VE +
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 555 AGE-SVEEIACGAYHVAV 571
+ V + CG ++ V
Sbjct: 352 ERQLEVRAVTCGPWNTYV 369
Score = 76 (31.8 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 238 ALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAAL 297
A G V+ WG AG + + GT L PR LE+ L + +A G H+
Sbjct: 178 AAGQVFSWG---------AGRHGQLGH-GTLEAELEPRLLEALQGLRMAKVAAGGWHSVC 227
Query: 298 VTRQGEVFTWGEESGGRL 315
++ G+++ WG G+L
Sbjct: 228 LSETGDIYIWGWNESGQL 245
Score = 51 (23.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 112 AEVWIAGLKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSAS-DSSVSLTRDISSPEV 170
A+V G ++ S + G I GWN+ G +R T N A + + L D E+
Sbjct: 216 AKVAAGGWHSVCLS-ETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEEL 274
Query: 171 SVS 173
+V+
Sbjct: 275 AVA 277
Score = 44 (20.5 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 25/83 (30%), Positives = 34/83 (40%)
Query: 135 GWNDGGLYLEDSRDLTSNSASDSSVSLTRDI-SSPEVSVSLNHPISSPTSFQT--EGSIS 191
GW+ L R S S S ++ RD+ +S E+ V L + S T Q GS +
Sbjct: 48 GWSYTALVTRGGRVELSGSVSGAADGC-RDVWASEELLVLLRNKGGSSTEVQAWVPGS-A 105
Query: 192 VNSERSHVASDNTNMQVKGSGSD 214
+ E V N KG G D
Sbjct: 106 LQGEPLWV--QNLVSGAKGQGED 126
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 167 (63.8 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 61/227 (26%), Positives = 105/227 (46%)
Query: 411 LFTFGDGTFGVLG------HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
+ +FGDG G LG G + P V +L +++ G +H+ AV
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHSLAVT------ 98
Query: 465 SSASVSSGKLFTWGDGDKNRLGH----GDKEPRLKPTCVPALIDYNFHKVACGHSLTVGL 520
SSG+++ WG D+ +LG ++ R +P V L + N ++ +
Sbjct: 99 -----SSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAI 153
Query: 521 TTSGHVFTMGSTVYGQLGNPNA--DGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
G ++ G + GQLG N + ++P VE+ LA E V +++ G H LT +V
Sbjct: 154 GDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVEN-LAAEHVVKVSLGWGHALALTVDGKV 212
Query: 579 YTWGKGANGRLGHGDVEDRKTPALVEALKDRHVK-YIACGS-NYSAA 623
+ WG A+GR+G+ + +L++++ D +K + A G N AA
Sbjct: 213 FGWGYVADGRVGNVGLP--LEASLLDSITDGSMKGHHAAGDLNLEAA 257
Score = 162 (62.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 66/237 (27%), Positives = 106/237 (44%)
Query: 392 VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPR-EVESLSGLRTIAVACG 450
++S++ G +H+ +TS+G+++ +G G LG + R E + + GL + V
Sbjct: 84 ISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQ-- 141
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK--EPRLKPTCVPALIDYNFH 508
AA +V S+A G L+ WG + +LG G+ E R+ P+ V L +
Sbjct: 142 ----AAFASGVV--SAAIGDDGSLWVWGRSKRGQLGLGNGIIEARV-PSRVENLAAEHVV 194
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYH 568
KV+ G + LT G VF G G++GN LP +E L +S+ + + +H
Sbjct: 195 KVSLGWGHALALTVDGKVFGWGYVADGRVGNVG----LP--LEASLL-DSITDGSMKGHH 247
Query: 569 VAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
A N K D+ P LVE + V IACGS++S +C
Sbjct: 248 AA--GDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILC 302
Score = 148 (57.2 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 44/152 (28%), Positives = 68/152 (44%)
Query: 279 SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV---GKDI-VQPHLLESLTM 334
SN+ D+ I+ G H+ VT GE++ WG G+LG V +D +P +E L
Sbjct: 78 SNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLEN 137
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVAS 394
+V + A+ G L+ WG LG+G + +P R+ L V
Sbjct: 138 VNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGI-IEARVPSRVEN-LAAEHVVK 195
Query: 395 VTCGPWHTALITSTGQLFTFG---DGTFGVLG 423
V+ G H +T G++F +G DG G +G
Sbjct: 196 VSLGWGHALALTVDGKVFGWGYVADGRVGNVG 227
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/177 (27%), Positives = 85/177 (48%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDI-VQPHLLESLTMTSVDFVTCG 343
V IACG H+ ++ G + + G G+LG +D+ ++P +T + + + G
Sbjct: 288 VADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSK-QDLGMKP---VDITESPIS-IAAG 342
Query: 344 EFHTCAVTMAGE--LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH 401
H+ A+ GE + +WG + + LG G + +P+ + G +G ASV+ G H
Sbjct: 343 LGHSLAICNRGERNILSWG--WNRSRQLGRGKPEN--LPREVEG-FDGESPASVSAGRVH 397
Query: 402 TALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
+ +T G+ + +G G G LG G + P +E + G AVA G H+ +V
Sbjct: 398 SLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVA-GFDHSLILV 453
Score = 135 (52.6 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 43/151 (28%), Positives = 68/151 (45%)
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVP-ALIDYNFHKVACGHSLTVGLTTSGHVFTMG 530
G L + G +LG ++ +KP + + I GHSL + ++ + G
Sbjct: 305 GTLLSAGSNIYGQLGRSKQDLGMKPVDITESPISI---AAGLGHSLAICNRGERNILSWG 361
Query: 531 STVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
QLG + LP VE GES ++ G H +T + E + WG G NGRLG
Sbjct: 362 WNRSRQLGRGKPEN-LPREVEG-FDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLG 419
Query: 591 HGDVEDRKTPALVEALKDRHVKYIACGSNYS 621
G D P L+E ++ ++ +A G ++S
Sbjct: 420 LGSSSDEPEPMLLEDVEGCVLQAVA-GFDHS 449
Score = 111 (44.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 40/138 (28%), Positives = 60/138 (43%)
Query: 491 EPRL-KPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD-GKLPC 548
EP L + TC + D +ACG ++ L G + + GS +YGQLG D G P
Sbjct: 276 EPCLVEETCNEKVAD-----IACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPV 330
Query: 549 LVEDKLAGESVEEIACGAYHVAVLTSRNE--VYTWGKGANGRLGHGDVEDRKTPALVEAL 606
+ ES IA G H + +R E + +WG + +LG G E+ P VE
Sbjct: 331 DIT-----ESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEGF 383
Query: 607 KDRHVKYIACGSNYSAAI 624
++ G +S +
Sbjct: 384 DGESPASVSAGRVHSLCV 401
Score = 89 (36.4 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
PCLVE+ E V +IACG+ H +L + + G G+LG + P V+ +
Sbjct: 277 PCLVEET-CNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKP--VD-I 332
Query: 607 KDRHVKYIACGSNYSAAIC 625
+ + IA G +S AIC
Sbjct: 333 TESPIS-IAAGLGHSLAIC 350
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 230 (86.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 105/382 (27%), Positives = 167/382 (43%)
Query: 275 RPLESNVVLD--VHHIACGVRHAALVTRQGEVF-TWGE--ESGGRLG-HGVGKDIVQ--P 326
+P+ + LD + ACG L ++ +V WG +LG H KD +
Sbjct: 97 QPVPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 156
Query: 327 HLLE----SLTM-----TSVDFVTCGEFHTCAVTMAGELYTWGDGTHN-AGLLGHGTDV- 375
++LE SL + T V V+CG H+ +T +++ G+ ++ G ++
Sbjct: 157 YVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIY 216
Query: 376 --SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYP 433
SH + R+ +G QV V CG H+ +T G++++ G G G G G S P
Sbjct: 217 SESHRV-HRMQD-FDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSP 273
Query: 434 REVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP 492
++ L+G+ I VA + + V SA G LF WG+ + +L
Sbjct: 274 TKLGGDLAGVNVIQVAT---YGDCCLAV-----SAD---GGLFGWGNSEYLQLASVTDST 322
Query: 493 RLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PN-ADGKLPCL 549
++ P C+ + ACG + L GHVF G YG LG PN + +P +
Sbjct: 323 QVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEM 379
Query: 550 VEDKLAGES-------VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPAL 602
+ L G + V I CG H A LT++ E++ WGK G LG G +ED+ P
Sbjct: 380 IPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR 439
Query: 603 VEALKDRHVKYIACGSNYSAAI 624
V + V +ACG ++ +
Sbjct: 440 V-TMPGEPVD-VACGVDHMVTL 459
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/174 (28%), Positives = 75/174 (43%)
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
V+ G +F WG +L V P L + V CG + G +
Sbjct: 298 VSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHV 357
Query: 357 YTWGDGTHNAGLLGHGTD-VSHWIPKRISGPLEGL-------QVASVTCGPWHTALITST 408
+ WG G+LG G + V +P+ I L GL QV+ + CG H A +T+
Sbjct: 358 FVWG-----YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNK 412
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
G+LF +G G LG G ++ +P V ++ G + VACGV H + + +
Sbjct: 413 GELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPG-EPVDVACGVDHMVTLAKSFI 464
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/144 (30%), Positives = 61/144 (42%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEE---SGGRLGHGVGKDIVQPH 327
V +PR L + V V ACG A++ +G VF WG G L +++ P
Sbjct: 324 VNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPT 383
Query: 328 LL---ESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
L E V + CG H A+T GEL+ WG G LG G + P R++
Sbjct: 384 LFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIR--GCLGIGRLEDQYFPWRVT 441
Query: 385 GPLEGLQVASVTCGPWHTALITST 408
P E + VA CG H + +
Sbjct: 442 MPGEPVDVA---CGVDHMVTLAKS 462
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 229 (85.7 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 105/384 (27%), Positives = 165/384 (42%)
Query: 275 RPLESNVVLD--VHHIACGVRHAALVTRQGEVF-TWGE--ESGGRLG-HGVGKD------ 322
+P+ + LD + ACG L ++ +V WG +LG H KD
Sbjct: 98 QPVPYRLELDQKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRGYE 157
Query: 323 -IVQPHL----LESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT---D 374
+++P L+ T V V+CG H+ +T +++ G+ + G G +
Sbjct: 158 YVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAY--GQCGRNVVENE 215
Query: 375 V---SHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVS 431
+ SH + R+ +G QV V CG H+ +T G++++ G G G G G S
Sbjct: 216 IYSESHKV-NRMQD-FDG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITS 272
Query: 432 YPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK 490
P ++ L+G+ + VA + + V SA G LF WG+ + +L
Sbjct: 273 VPTKLGGDLAGVNVVQVAT---YGDCCLAV-----SAE---GGLFGWGNSEYLQLASVTD 321
Query: 491 EPRLK-PTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PN-ADGKLP 547
++ P C+P + ACG + L GHVF G YG LG PN + P
Sbjct: 322 STQVNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETAFP 378
Query: 548 CLVEDKLAGES-------VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTP 600
++ L G + V I CG H A LTS+ E++ WGK G LG G +ED+ P
Sbjct: 379 EVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFP 438
Query: 601 ALVEALKDRHVKYIACGSNYSAAI 624
V + V +ACG ++ +
Sbjct: 439 WRV-TMPGEPVD-VACGVDHMVTL 460
Score = 212 (79.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 90/317 (28%), Positives = 141/317 (44%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESL 332
+P PL+ V ++CG H+ ++T VF+ G + G+ G V ++ + +
Sbjct: 165 VPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVN 224
Query: 333 TMTSVDF----VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
M D V CG+ H+ +T GE+Y+ G G LGH D++ +P ++ G L
Sbjct: 225 RMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGH-YDITS-VPTKLGGDLA 282
Query: 389 GLQVASV-TCGPWHTALITSTGQLFTFGDGTFGVLGH-GDRKNVSYPREVESLSGLRTIA 446
G+ V V T G A +++ G LF +G+ + L D V+ PR + SG+ +
Sbjct: 283 GVNVVQVATYGDCCLA-VSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVK 340
Query: 447 -VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK--E---PRLKPTCVP 500
ACG AV+ G +F WG G LG G E P + P +
Sbjct: 341 QAACG-GTGCAVLN----------GEGHVFVWGYGI---LGKGPNLVETAFPEVIPPTLF 386
Query: 501 ALIDYN--FH--KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDKLA 555
L ++N H + CG S LT+ G +F G + G LG + + P V +
Sbjct: 387 GLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVT--MP 444
Query: 556 GESVEEIACGAYHVAVL 572
GE V+ +ACG H+ L
Sbjct: 445 GEPVD-VACGVDHMVTL 460
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 57/211 (27%), Positives = 86/211 (40%)
Query: 257 GADKNVNYLGTRADVLLPRPLESNVV-LDVHHIACGVRHAALVTRQGEVFTWGEESGGRL 315
GAD LG +P L ++ ++V +A V+ +G +F WG +L
Sbjct: 258 GADGQTG-LGHYDITSVPTKLGGDLAGVNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQL 316
Query: 316 GHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD 374
V P L + V CG + G ++ WG G G T
Sbjct: 317 ASVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETA 376
Query: 375 VSHWIPKRISGPLE---GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVS 431
IP + G E G+ V+ + CG H A +TS G+LF +G G LG G ++
Sbjct: 377 FPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQY 436
Query: 432 YPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
+P V ++ G + VACGV H + + V
Sbjct: 437 FPWRV-TMPG-EPVDVACGVDHMVTLAKSFV 465
>TAIR|locus:2058694 [details] [associations]
symbol:BRXL1 "AT2G35600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC006068 EMBL:AC005314 EMBL:AY087525 IPI:IPI00518375
PIR:F84770 RefSeq:NP_565809.1 UniGene:At.37646 PaxDb:O82281
PRIDE:O82281 EnsemblPlants:AT2G35600.1 GeneID:818126
KEGG:ath:AT2G35600 TAIR:At2g35600 eggNOG:NOG286599
HOGENOM:HOG000240563 InParanoid:O82281 OMA:FTCINCT PhylomeDB:O82281
ProtClustDB:CLSN2688709 Genevestigator:O82281 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 Uniprot:O82281
Length = 331
Score = 213 (80.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 37/71 (52%), Positives = 55/71 (77%)
Query: 1019 TRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWW 1078
+R P++S +S +++ EW+E+ EPGVYIT+ L DGTR+L+RVRFSR RFGE A+TWW
Sbjct: 261 SRDEPPSMSNAS-EMQGEWVEEDEPGVYITIRQLPDGTRELRRVRFSRERFGEVHAKTWW 319
Query: 1079 SENREKVYERY 1089
+NR+++ +Y
Sbjct: 320 EQNRDRIQTQY 330
Score = 178 (67.7 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 1036 EWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVRGLD 1095
EW+ Q EPGV+IT V+L G DLKR+RFSR F + QA+ WW EN +++ E YNV+ +
Sbjct: 138 EWMAQVEPGVHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFN 197
Query: 1096 KSS 1098
+ +
Sbjct: 198 RQA 200
Score = 52 (23.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 887 DVIKSLTAQLKDMAER 902
+ +KSLT Q+KDMA +
Sbjct: 32 EAVKSLTTQIKDMASK 47
Score = 42 (19.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 144 EDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISSPT 182
+++R T+ + ++ SLT I S +H S PT
Sbjct: 20 DEARGSTTPNTKEAVKSLTTQIKDMASKFSGSHKQSKPT 58
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 180 (68.4 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 52/181 (28%), Positives = 87/181 (48%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
A GVRH L+T GEV+++G + P L +L V V G FH+
Sbjct: 47 ALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPS--SPLLESALVGHHVITVATGSFHSG 104
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS----GPLEGLQVASVTCGPWHTAL 404
AVT +G +Y WG+ + + V P IS P +++ + CG HT
Sbjct: 105 AVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEHTLA 164
Query: 405 ITSTGQLFTFGDGT-FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVT 463
++ + +++ +G G G++ V+ P++VE L+G + VACG +H+ A+V+ +
Sbjct: 165 LSLSREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPP 222
Query: 464 Q 464
Q
Sbjct: 223 Q 223
Score = 166 (63.5 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 60/212 (28%), Positives = 97/212 (45%)
Query: 425 GDRKNVSYPREVESLSGLRTIAVACGV-WHTAAVVEVIVTQSSASVSS--GKLFTWGDGD 481
G + +S P + +S R + A V T + ++ A + S +++TWG G
Sbjct: 471 GGSRRLSLPGLLSQVSP-RLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGK 529
Query: 482 KNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPN 541
+ +LGHGD PRL+P CV L + G S ++ LT V++ GS +GQLG+
Sbjct: 530 EGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSE 589
Query: 542 ADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGKGANGRL--GHGDV--ED 596
+P L K++ E+ V +A G + L E + G +GR GD E+
Sbjct: 590 FPTTVPRL--SKVSSENGVWSVAAGQDYSLFLVD-TEDFQPGLYYSGRQDRAEGDTLPEN 646
Query: 597 ---RKTPALVEALKDRHVKYIACGSN-YSAAI 624
KTP L+ K ++ + G + Y A +
Sbjct: 647 PSGTKTPVLLSCSKLGYISRVTAGKDSYLALV 678
Score = 142 (55.0 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 269 ADVLLPRPLESNVVLDVHHI---ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ 325
A++ PL + ++ HH+ A G H+ VT G V+ WGE + G+ + + +
Sbjct: 75 AEICPSSPLLESALVG-HHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPE 133
Query: 326 PH---LLESLTMTSVDF----VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHW 378
P + +S T S+ + CGE HT A++++ E++ WG G GL+ V+
Sbjct: 134 PSPVSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGCQ-LGLITTTFPVTK- 191
Query: 379 IPKRISGPLEGLQVASVTCGPWHT-ALI 405
P+++ L G V V CG +H+ AL+
Sbjct: 192 -PQKVEH-LAGRVVLQVACGAFHSLALV 217
Score = 133 (51.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 59/225 (26%), Positives = 92/225 (40%)
Query: 358 TWGDGTHNAGLLGHGTDVSHW--IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFG 415
T +G+ GL+ H + P+R+ G G V G H L+T G++++FG
Sbjct: 9 TEAEGSKERGLV-HVWQAGSFSLTPERLPG-WGGKTVLQAALGVRHGVLLTEDGEVYSFG 66
Query: 416 DGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLF 475
T S P +L G I VA G +H+ AV E SG ++
Sbjct: 67 --TLPWKSESAEICPSSPLLESALVGHHVITVATGSFHSGAVTE-----------SGVVY 113
Query: 476 TWGDGDKNRLGHGDKE--PRLKPTCV------PALIDYNFHKVACGHSLTVGLTTSGHVF 527
WG+ + +++ P P + P+L ++ACG T+ L+ S ++
Sbjct: 114 MWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLA-VRILQLACGEEHTLALSLSREIW 172
Query: 528 TMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVL 572
G+ L P VE LAG V ++ACGA+H L
Sbjct: 173 AWGTGCQLGLITTTFPVTKPQKVEH-LAGRVVLQVACGAFHSLAL 216
Score = 127 (49.8 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 570 AVLTS-RNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLHK 628
A+L S R EV+TWGKG G+LGHGDV R P V+ L + V ++ G ++S A+
Sbjct: 513 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS 572
Query: 629 WVSS 632
V S
Sbjct: 573 QVYS 576
Score = 100 (40.3 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLES-NVVLDVHHIACGVRHAALV 298
G VY+WGE N A N Y+ + V + S ++ + + +ACG H +
Sbjct: 110 GVVYMWGE----NAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEHTLAL 165
Query: 299 TRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTSVDFVTCGEFHTCAV 350
+ E++ WG +G +LG + +P +E L V V CG FH+ A+
Sbjct: 166 SLSREIWAWG--TGCQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 84 (34.6 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 403 ALITSTG-QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
AL+ S +++T+G G G LGHGD P V+ L G I + G H+ A+
Sbjct: 513 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALT--- 569
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
+ ++++WG +LGH + PT VP L
Sbjct: 570 --------AKSQVYSWGSNTFGQLGHSEF-----PTTVPRL 597
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 464 QSSASVSSGKLFTWGDGDKNRLGHG 488
Q S +SG++F D R GHG
Sbjct: 1106 QGVYSYASGEVFEGCFQDNMRHGHG 1130
Score = 37 (18.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 995 ANSSCVSESSEGKESMPLQDSENGTRPRSPALSVSS 1030
A S V ++ G PL + + + P +S S+
Sbjct: 993 AISQAVDQALRGTSDFPLYGGGSSVQRQEPPISRSA 1028
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 234 (87.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 88/305 (28%), Positives = 136/305 (44%)
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHN-AGLLGHGTDV---SHWIPKRISGPLEGL 390
T V V+CG H+ +T +++ G+ ++ G ++ SH + R+ +G
Sbjct: 180 TQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKV-HRMQD-FDG- 236
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES-LSGLRTIAVAC 449
QV V CG H+ +T G++++ G G G G G S P ++ L+G+ + VA
Sbjct: 237 QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVAT 296
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPALIDYNFH 508
+ + V SA G LF WG+ + +L ++ P C+P
Sbjct: 297 ---YGDCCLAV-----SAD---GSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVK 345
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PN-ADGKLPCLVEDKLAGES-------V 559
+ ACG + L GHVF G YG LG PN + LP ++ L G + V
Sbjct: 346 QAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRV 402
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSN 619
I CG H A LT R E++ WGK G LG G +ED+ P V + V +ACG +
Sbjct: 403 SRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPVD-VACGVD 460
Query: 620 YSAAI 624
+ +
Sbjct: 461 HMVTL 465
Score = 208 (78.3 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 92/319 (28%), Positives = 139/319 (43%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGE-VFTWGEESGGRLGHGVGKDIV-----QP 326
+P PL V ++CG H+ ++T GE VF+ G S G+ G V ++ + +
Sbjct: 170 VPLPLHRPQETQVLQVSCGRAHSLVLT-DGEGVFSMGNNSYGQCGRKVVENEIYSESHKV 228
Query: 327 HLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 386
H ++ V V CG+ H+ +T GE+Y+ G G LGH S P ++ G
Sbjct: 229 HRMQDFDGQVVQ-VACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS--APTKLGGD 285
Query: 387 LEGLQVASV-TCGPWHTALITSTGQLFTFGDGTFGVLGH-GDRKNVSYPREVESLSGLRT 444
L G+ V V T G A +++ G LF +G+ + L D V+ PR + SG+
Sbjct: 286 LAGVNVVQVATYGDCCLA-VSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQ 343
Query: 445 IA-VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK--E---PRLKPTC 498
+ ACG AV+ G +F WG G LG G E P + P
Sbjct: 344 VKQAACG-GTGCAVLN----------GEGHVFVWGYGI---LGKGPNLVETALPEMIPPT 389
Query: 499 VPALIDYN----FHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGK-LPCLVEDK 553
+ L + N ++ CG S LT G +F G + G LG + + P V
Sbjct: 390 LFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVT-- 447
Query: 554 LAGESVEEIACGAYHVAVL 572
+ GE V+ +ACG H+ L
Sbjct: 448 MPGEPVD-VACGVDHMVTL 465
Score = 141 (54.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 46/169 (27%), Positives = 70/169 (41%)
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
V+ G +F WG +L V P L + V CG + G +
Sbjct: 304 VSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHV 363
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE---GLQVASVTCGPWHTALITSTGQLFT 413
+ WG G G T + IP + G E ++V+ + CG H A +T G+LF
Sbjct: 364 FVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFV 423
Query: 414 FGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
+G G LG G ++ +P V ++ G + VACGV H + + V
Sbjct: 424 WGKNIRGCLGIGRLEDQYFPWRV-TMPG-EPVDVACGVDHMVTLAKSFV 470
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 45/144 (31%), Positives = 62/144 (43%)
Query: 271 VLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEE---SGGRLGHGVGKDIVQPH 327
V +PR L + V V ACG A++ +G VF WG G L +++ P
Sbjct: 330 VNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPT 389
Query: 328 L--LESLTM-TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS 384
L L L V + CG H A+T GEL+ WG G LG G + P R++
Sbjct: 390 LFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIR--GCLGIGRLEDQYFPWRVT 447
Query: 385 GPLEGLQVASVTCGPWHTALITST 408
P E + VA CG H + +
Sbjct: 448 MPGEPVDVA---CGVDHMVTLAKS 468
Score = 39 (18.8 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 300 RQGEVFTWGEESGGRLG 316
R +F WG G LG
Sbjct: 63 RADRIFVWGFSFSGALG 79
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 226 (84.6 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 88/315 (27%), Positives = 133/315 (42%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV--QPHLLE 330
+P PLE V ++CG H+ ++T VFT G S G+ G V +D + + HL+
Sbjct: 155 IPLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIH 214
Query: 331 SLTM--TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 388
L + V V CG+ H+ T G ++ G G LGH S +P ++ G +
Sbjct: 215 QLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITS--VPTKLGGDIA 272
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGH-GDRKNVSYPREVESLSGLRTIAV 447
G+ + V+ ++ G LF +G+ + L + V+ PR + G +
Sbjct: 273 GVNIVQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIG-KIKEA 331
Query: 448 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI---- 503
ACG +++T+ G +F WG G LG G P L T VP +I
Sbjct: 332 ACG-----GTGNIVLTEE------GAVFVWGYGI---LGKG---PNLTETAVPEMIPPSL 374
Query: 504 --------DYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKL 554
D +V CG S LT G +F G + G LG D P V +
Sbjct: 375 FGWSDFSSDVRVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVT--I 432
Query: 555 AGESVEEIACGAYHV 569
GE V+ +ACG H+
Sbjct: 433 PGEVVD-VACGVDHM 446
Score = 217 (81.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 85/313 (27%), Positives = 136/313 (43%)
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-DVSHWIPKRIS 384
P LE T V V+CG H+ +T + ++T G+ ++ G G + + +
Sbjct: 156 PLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSY--GQCGRKVVEDEIYSESHLI 213
Query: 385 GPLEGL--QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES-LSG 441
L +V V CG H+ T G +F G G G G G S P ++ ++G
Sbjct: 214 HQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAG 273
Query: 442 LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVP 500
+ + V+ + + + S G LF WG+ + +L + ++ P +P
Sbjct: 274 VNIVQVS-------SYGDCCLAVSD----EGDLFGWGNSEYLQLASVTETTQVNVPRHLP 322
Query: 501 ALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PN-ADGKLPCLVEDKLAGES 558
I + ACG + + LT G VF G YG LG PN + +P ++ L G S
Sbjct: 323 FKIG-KIKEAACGGTGNIVLTEEGAVFVWG---YGILGKGPNLTETAVPEMIPPSLFGWS 378
Query: 559 -------VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
V + CG H A LT+R E++ WGK G LG G +ED+ P V + V
Sbjct: 379 DFSSDVRVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTIPGE--V 436
Query: 612 KYIACGSNYSAAI 624
+ACG ++ ++
Sbjct: 437 VDVACGVDHMVSM 449
Score = 150 (57.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 48/166 (28%), Positives = 75/166 (45%)
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCGEFHTCAVTMAGEL 356
V+ +G++F WG +L V P L + + CG +T G +
Sbjct: 289 VSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLP-FKIGKIKEAACGGTGNIVLTEEGAV 347
Query: 357 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE---GLQVASVTCGPWHTALITSTGQLFT 413
+ WG G G T V IP + G + ++VA V CG H A +T+ G+LF
Sbjct: 348 FVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGELFV 407
Query: 414 FGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
+G G LG G ++ +P V ++ G + VACGV H ++V+
Sbjct: 408 WGKNLRGCLGIGRMEDQYFPWRV-TIPG-EVVDVACGVDHMVSMVK 451
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 235 (87.8 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 89/377 (23%), Positives = 166/377 (44%)
Query: 242 VYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQ 301
+Y WG+++ ++ K N L + P+++ G + ++T
Sbjct: 165 IYQWGQILTSSLTLKSCAKATNMLFNDE---ISAPIQTEF---------GQNYNLILTDT 212
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGD 361
G V++ G S G+ GH +D++ P + L+ + + CG H+ A+ G++Y+WG+
Sbjct: 213 GAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGN 272
Query: 362 GTHNAGLLGHGTDVSHW-IPKRIS--GPLEGLQVAS-VTCGPWHTALITSTGQLFTFGDG 417
G +G LG G D S P IS ++A+ + G ++ ++ S G +++FG
Sbjct: 273 GA--SGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSN 330
Query: 418 TFGVLGHGDRKNV----SYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
LG+ + S P+++ S+ +++IA C WH+ +++ G+
Sbjct: 331 LHYKLGYKECDGALGFQSTPKKIPSILQMKSIA--CASWHSV-FLDL----------KGR 377
Query: 474 LFTWGDGDKNRLGHGDKE-----P-RLKPT------CVPALIDYNFHKVACGHSLTVGLT 521
++T G RLG P R+ T +P + ++ACG + T L+
Sbjct: 378 VYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQ--EEVIKQIACGTNFTTVLS 435
Query: 522 TSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGE----SVEEIACGAYHVAVLTSRNE 577
SG +++ G QLG N G + KL ++ A G HV L+ + E
Sbjct: 436 ESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGE 495
Query: 578 VYTWGKGANGRLGHGDV 594
V+ +G + + G G+V
Sbjct: 496 VFCYGDNSTLQCGFGEV 512
Score = 208 (78.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 80/317 (25%), Positives = 143/317 (45%)
Query: 347 TCAVTMAG-ELYTWGDG-THNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 404
T +TM +Y WG T + L + IS P++ G + +
Sbjct: 155 TSMMTMEQTSIYQWGQILTSSLTLKSCAKATNMLFNDEISAPIQ------TEFGQNYNLI 208
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
+T TG +++ G ++G GH +++V P ++ LS R ++ACG H+ A+ ++
Sbjct: 209 LTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVY 268
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA------CGHSLTV 518
S + +SG+L G LG+ D PT + + + +++A C +S+ +
Sbjct: 269 SWGNGASGRL-----G----LGN-DFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMIL 318
Query: 519 GLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGE--SVEEIACGAYHVAVLTSRN 576
G ++G V++ GS ++ +LG DG L K ++ IAC ++H L +
Sbjct: 319 G--SNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIACASWHSVFLDLKG 376
Query: 577 EVYTWGKGANGRLGHG------------DVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
VYT G NGRLG + + KT + ++ +K IACG+N++ +
Sbjct: 377 RVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLP--QEEVIKQIACGTNFTTVL 434
Query: 625 C----LHKW-VSSAEQL 636
L+ W V++ QL
Sbjct: 435 SESGSLYSWGVNTKSQL 451
Score = 147 (56.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 63/268 (23%), Positives = 116/268 (43%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA 296
D LG VY WG + G + + + T + + SN + IA G ++
Sbjct: 262 DDLGQVYSWGNGASGRL---GLGNDFSIVPTPTLISVINRFGSNEIATA--IAAGCDNSM 316
Query: 297 LVTRQGEVFTWGEESGGRLGH-----GVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVT 351
++ G+V+++G +LG+ +G + L M S+ C +H+ +
Sbjct: 317 ILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSI---ACASWHSVFLD 373
Query: 352 MAGELYTWGDGTHNAGLLGHG-TDVSHWIPKRIS-------GPLEGLQVAS-VTCGPWHT 402
+ G +YT G T+ G LG + S + P+R+S G L +V + CG T
Sbjct: 374 LKGRVYTCGSSTN--GRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFT 431
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVS-YPREVESLSGLRTIAVACGVWHTAAVVEVI 461
+++ +G L+++G T LG + +S Y + + ++ L + H+ AV +
Sbjct: 432 TVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTI-----HSFAVGDQH 486
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHGD 489
V S G++F +GD + G G+
Sbjct: 487 VVALS---DQGEVFCYGDNSTLQCGFGE 511
Score = 147 (56.8 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 58/233 (24%), Positives = 103/233 (44%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
GDVY +G + K G + LG ++ P+ + S +L + IAC H+ +
Sbjct: 322 GDVYSFGSNLH---YKLGYKECDGALGFQST---PKKIPS--ILQMKSIACASWHSVFLD 373
Query: 300 RQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTS----------VDFVTCGEFHTC 348
+G V+T G + GRLG + P + S+T + + + CG T
Sbjct: 374 LKGRVYTCGSSTNGRLGRAISSYSSFYPERV-SITNSKTNGTLPQEEVIKQIACGTNFTT 432
Query: 349 AVTMAGELYTWGDGTHNA-GLLGH-GTDVSHWIPKRISGPLEGLQVASVTCGPWHTALIT 406
++ +G LY+WG T + GL+ G + PK ++ L + S G H ++
Sbjct: 433 VLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTA-LNPYTIHSFAVGDQHVVALS 491
Query: 407 STGQLFTFGDGTFGVLGHGDRKN--VSYPR-EVESLSGLRTIAVACGVWHTAA 456
G++F +GD + G G+ N ++ + ++E+ S I GV+ +A
Sbjct: 492 DQGEVFCYGDNSTLQCGFGEVLNFEINLTKVKIETTSSDAPIIGGGGVFKVSA 544
Score = 48 (22.0 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 20/62 (32%), Positives = 25/62 (40%)
Query: 55 SSGERSLKLASVSKIIPGQRTAVFQRYLRPE--KDYLSFSLIYNNGKRSLDLICKDKVEA 112
S E+ L + P R Y R E KD+ SF I +NG L I + VE
Sbjct: 11 SDFEKILNGLNTFDSFPPLRILSLATYCRKEEVKDFFSF--IDSNGDTCLTFIIQSTVEN 68
Query: 113 EV 114
V
Sbjct: 69 NV 70
Score = 41 (19.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 41 FRLSNDETSLIWISSS-GERSLKLASVSKIIPGQRTAVFQ 79
F+L + L+ + +S GE L ++S+S I + V Q
Sbjct: 81 FKLLEENIELLNLPNSYGETPLHVSSISNNIEFMKLLVLQ 120
Score = 40 (19.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 178 ISSPTSFQTEGSISVNSERSHVASDNTNMQVKGSGSDVF 216
+ +PT N + +A+ N + GS DV+
Sbjct: 287 VPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVY 325
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 204 (76.9 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 48/158 (30%), Positives = 83/158 (52%)
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID-YNFHKVACGHSLTVGLTTSGHVFTMG 530
G+++ G ++ +LG GD + R + + +++ G + + LT G ++T G
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 531 STVYGQLGNPN---ADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANG 587
G+LG P + K+P LV E V ++ACG H VLT + VYT+G G G
Sbjct: 63 EPESGKLGLPPKLLVNHKVPQLVPG--ISEKVIQVACGGGHTVVLTEK-AVYTFGLGQFG 119
Query: 588 RLGHGDVE-DRKTPALVEALKDRHVKYIACGSNYSAAI 624
+LG G + P ++E++KD+ + ++ CG N++A I
Sbjct: 120 QLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 184 (69.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 53/160 (33%), Positives = 81/160 (50%)
Query: 302 GEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT-SVDFVTCGEFHTCAVTMAGELYTWG 360
G+V+ G + G+LG G + HL+ T + ++ G + A+T GELYT+G
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 361 DGTHNAGLLGHGTD--VSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
+ +G LG V+H +P+ + G E +V V CG HT ++T ++TFG G
Sbjct: 63 EP--ESGKLGLPPKLLVNHKVPQLVPGISE--KVIQVACGGGHTVVLTEKA-VYTFGLGQ 117
Query: 419 FGVLGHGDRK-NVSYPREVESLSGLRTIAVACGVWHTAAV 457
FG LG G S P+ +ES+ + V CG HTA +
Sbjct: 118 FGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 134 (52.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ---PHLLESLTMTSVDFVT 341
+ ++ G +A +T +GE++T+GE G+LG K +V P L+ ++ + V
Sbjct: 39 IKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPP-KLLVNHKVPQLVPGISEKVIQ-VA 96
Query: 342 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWH 401
CG HT +T +YT+G G G LG GT ++ ++ +++ V CG H
Sbjct: 97 CGGGHTVVLTEKA-VYTFGLGQF--GQLGLGTFTFETSEPKVIESVKDKKISHVCCGENH 153
Query: 402 TALIT 406
TALIT
Sbjct: 154 TALIT 158
Score = 118 (46.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 45/169 (26%), Positives = 72/169 (42%)
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 468
GQ++ G G LG GD + S I+ H + S+A
Sbjct: 3 GQVYATGGNNEGQLGLGD---------TDERSAFHLISFFTSQ-HKIKQLSAGSNTSAAL 52
Query: 469 VSSGKLFTWGDGDKNRLGHGDK--EPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
+ G+L+T+G+ + +LG K P VP + + +VACG TV LT V
Sbjct: 53 TAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACGGGHTVVLTEKA-V 110
Query: 527 FTMGSTVYGQLG--NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLT 573
+T G +GQLG + P ++E + + + + CG H A++T
Sbjct: 111 YTFGLGQFGQLGLGTFTFETSEPKVIES-VKDKKISHVCCGENHTALIT 158
Score = 117 (46.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 354 GELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
G++Y G +N G LG G IS ++ ++ G +A +T+ G+L+T
Sbjct: 3 GQVYATGG--NNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYT 60
Query: 414 FGDGTFGVLGHGDRKNVSY--PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS 471
FG+ G LG + V++ P+ V +S + I VACG HT V++T+ +
Sbjct: 61 FGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACGGGHT-----VVLTEKA----- 109
Query: 472 GKLFTWGDGDKNRLGHGDKE-PRLKPTCVPALIDYNFHKVACGHSLTVGLT 521
++T+G G +LG G +P + ++ D V CG + T +T
Sbjct: 110 --VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 158
>TAIR|locus:2088212 [details] [associations]
symbol:ATBRXL2 "AT3G14000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AB019229 HOGENOM:HOG000240563 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AK117522 EMBL:BT029002 IPI:IPI00533673
RefSeq:NP_188016.2 RefSeq:NP_974309.1 UniGene:At.39306
EnsemblPlants:AT3G14000.1 EnsemblPlants:AT3G14000.2 GeneID:820614
KEGG:ath:AT3G14000 TAIR:At3g14000 eggNOG:NOG241055
InParanoid:Q8GYL9 OMA:IETEWVE PhylomeDB:Q8GYL9
ProtClustDB:CLSN2690922 Genevestigator:Q8GYL9 Uniprot:Q8GYL9
Length = 374
Score = 214 (80.4 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 49/131 (37%), Positives = 73/131 (55%)
Query: 962 TGGLSQFLRETTGASGRDDQPVIRLPN-GSV-GVLANSSCVSESSEGKESMPLQDSENGT 1019
+G L+ T + D + P S+ G +S V ES+ S +++++
Sbjct: 247 SGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVDESARSSFSREEEEADHS- 305
Query: 1020 RPRSPALSVSS-HQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWW 1078
LSVS+ +E EW+EQ E GVYIT+ AL DGTR+L+RVRFSR +FGE A WW
Sbjct: 306 ---GEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRFSREKFGETNARLWW 362
Query: 1079 SENREKVYERY 1089
+NR ++ ++Y
Sbjct: 363 EQNRARIQQQY 373
Score = 186 (70.5 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 37/82 (45%), Positives = 49/82 (59%)
Query: 1036 EWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVRGLD 1095
EW+ Q EPGV IT V+L +G D+KR+RFSR F + QA+ WW+EN +KV E YNV+ +
Sbjct: 144 EWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFN 203
Query: 1096 KSSASGQAARRPEGTLSPTSQT 1117
+ S R E S T
Sbjct: 204 QQSVPLPTPPRSEDGSSRIQST 225
Score = 52 (23.4 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 889 IKSLTAQLKDMAERLPPGVY 908
IKSLT+Q+KDMA + G Y
Sbjct: 40 IKSLTSQIKDMAVKAS-GAY 58
Score = 41 (19.5 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 119 LKALISSGQGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISSPE 169
LK +S G+G + G + +++E+ +L A L +S PE
Sbjct: 113 LKGFLS-GEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPE 162
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 229 (85.7 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 75/284 (26%), Positives = 117/284 (41%)
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHW--IPKRISGPLEGLQVAS 394
VD V + H V G Y WG+GTH G LG T + W P R+ + V S
Sbjct: 455 VD-VAMSDSHFVVVNEDGSAYAWGEGTH--GQLGL-TALEAWKHYPSRMES-VRNYHVVS 509
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHT 454
G T L+T G L + G LG +++N P+ + L+ +R VA G+ H
Sbjct: 510 ACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHV 569
Query: 455 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVP-ALIDYNFHKVAC 512
A+ G ++ WG LG G+ + + K P + + + K+ C
Sbjct: 570 LALSR-----------EGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYC 618
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVL 572
G + L +G + GS Y +LG + K+ + +L V + + H L
Sbjct: 619 GPDTSAVLFANGELHVCGSNDYNKLGFQRS-AKITAFKKVQLP-HKVTQACFSSTHSVFL 676
Query: 573 TSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIAC 616
VYT G+ A G+ G P LV+++K R++ C
Sbjct: 677 VEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRYIVKANC 720
Score = 219 (82.2 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 92/322 (28%), Positives = 140/322 (43%)
Query: 281 VVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDF 339
V++DV A H +V G + WGE + G+LG + P +ES+ V
Sbjct: 453 VIVDV---AMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVS 509
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGP 399
G+ T VT AG L + G H A LG ++ PK I+ L ++V V G
Sbjct: 510 ACAGDGFTILVTQAGSLLSCGSNAHLA--LGQDEQRNYHSPKLIAR-LADVRVEQVAAGL 566
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGD-RKNVSYPREVESLSGLRT--IAVACGVWHTAA 456
H ++ G ++ +G T G LG G+ ++ +P+++ LS ++T + CG T+A
Sbjct: 567 QHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKI-LLSHVKTKPSKIYCGP-DTSA 624
Query: 457 VVEVIVTQSSASVSSGKLFTWGDGDKNRLG--HGDKEPRLKPTCVPALIDYNFHKV--AC 512
V+ ++G+L G D N+LG K K +P HKV AC
Sbjct: 625 VL----------FANGELHVCGSNDYNKLGFQRSAKITAFKKVQLP-------HKVTQAC 667
Query: 513 GHSL-TVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVA 570
S +V L G+V+TMG GQ G + + P LV D + + + C
Sbjct: 668 FSSTHSVFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLV-DSVKSRYIVKANCSDQCTI 726
Query: 571 VLTSRNEVYTWGKGANGRLGHG 592
V + N + WG NG G G
Sbjct: 727 VASEDNIITVWGT-RNGLPGIG 747
Score = 171 (65.3 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 51/177 (28%), Positives = 86/177 (48%)
Query: 455 AAVVEVIVTQSSASV--SSGKLFTWGDGDKNRLGHGDKEP-RLKPTCVPALIDYNFHKVA 511
A +V+V ++ S V G + WG+G +LG E + P+ + ++ +Y+
Sbjct: 452 AVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSAC 511
Query: 512 CGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAYHVA 570
G T+ +T +G + + GS + LG + + P L+ +LA VE++A G HV
Sbjct: 512 AGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIA-RLADVRVEQVAAGLQHVL 570
Query: 571 VLTSRNEVYTWGKGANGRLGHGDVEDR-KTPA--LVEALKDRHVKYIACGSNYSAAI 624
L+ VY WG G LG G+ + + K P L+ +K + K I CG + SA +
Sbjct: 571 ALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSK-IYCGPDTSAVL 626
Score = 142 (55.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 71/302 (23%), Positives = 115/302 (38%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHI-AC-GVRHAAL 297
G Y WGE G + A P +ES V + H + AC G L
Sbjct: 471 GSAYAWGE---------GTHGQLGLTALEAWKHYPSRMES--VRNYHVVSACAGDGFTIL 519
Query: 298 VTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELY 357
VT+ G + + G + LG ++ P L+ L V+ V G H A++ G +Y
Sbjct: 520 VTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSREGAVY 579
Query: 358 TWGDGTHNAGLLGHGT-DVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
WG T G LG G P++I + + + CGP +A++ + G+L G
Sbjct: 580 VWGTST--CGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGS 637
Query: 417 GTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFT 476
+ LG ++ ++V+ L + AC T S V G ++T
Sbjct: 638 NDYNKLGFQRSAKITAFKKVQ-LP--HKVTQAC----------FSSTHSVFLVEGGYVYT 684
Query: 477 WGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQ 536
G + + G PT V ++ K C T+ + + ++ T+ T G
Sbjct: 685 MGRNAEGQRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCTI-VASEDNIITVWGTRNGL 743
Query: 537 LG 538
G
Sbjct: 744 PG 745
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 229 (85.7 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 84/271 (30%), Positives = 125/271 (46%)
Query: 368 LLGHGTDVSHWIPKRISGPLEGLQVASVTCG--PWHTALI-TSTGQLFTFGDGTFGVLGH 424
LL HG VS +I + EGL + P H T ++T+GD T LGH
Sbjct: 105 LLKHG--VSLYIQDK-----EGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGH 157
Query: 425 GDRKNVSYPREVE--SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDK 482
G + + +P V+ S SG+ V +H+ V ++Q G+++T G G
Sbjct: 158 GSQNSKHHPELVDLFSRSGIYIKQVVLCKFHS-----VFLSQK------GQVYTCGHGPG 206
Query: 483 NRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NP 540
RLGHGD++ L P V L +N +VA TV LT G V+T G ++ QLG P
Sbjct: 207 GRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPP 266
Query: 541 NADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG-DVEDRK 598
+ +P ++ K L G ++ +A G +H VL +R VYT G G+LG D K
Sbjct: 267 PSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG-GQLGCLLDPNGEK 324
Query: 599 ---TPALVEALKDRHVKYIACGSNYSAAICL 626
P V AL + + ++ A +C+
Sbjct: 325 CVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 205 (77.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 78/300 (26%), Positives = 129/300 (43%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV---DFVTCGEFHTCAVTMAGELYTW 359
+V+TWG+ + LGHG P L++ + + + V C +FH+ ++ G++YT
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQVYTC 201
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G G LGHG + + +P+ + G L G + V HT ++T G ++TFG F
Sbjct: 202 GHGP--GGRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIF 258
Query: 420 GVLGH-GDRKNVSYPREVES--LSGLRTIAVACGVWHTAAVV-EVIVTQSSASVSSGKLF 475
LG + + PR++++ L G I VA G +HT E + T G L
Sbjct: 259 HQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLNGGQLGCLL 318
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALI--DYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
D N G+K P V AL D VA TV +TT G ++ +
Sbjct: 319 -----DPN----GEKCVTA-PRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQ 368
Query: 534 YGQLGNPNADGKLPCL----VEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
++ + + K + +E K+ E ++E + + V+ W + N L
Sbjct: 369 CKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCW-RSVNSSL 427
Score = 180 (68.4 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 59/204 (28%), Positives = 96/204 (47%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DVY WG+ N +N + D L R S + + + C H+ +++
Sbjct: 143 DVYTWGDNT--NFTLGHGSQNSKHHPELVD-LFSR---SGIYIK-QVVLCKF-HSVFLSQ 194
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
+G+V+T G GGRLGHG + + P L+E L + V + HT +T G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 361 DGT-HNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQLFTFG--D 416
H G++ + + +P++I L+G + V G +HT L T ++T G
Sbjct: 255 LNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG 311
Query: 417 GTFG-VLGHGDRKNVSYPREVESL 439
G G +L K V+ PR+V +L
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSAL 335
Score = 37 (18.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 571 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH 610
+ +RNE+ + G G E RK+ E L + H
Sbjct: 443 IALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSNLH 482
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 221 (82.9 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 97/391 (24%), Positives = 170/391 (43%)
Query: 261 NVNYLGTRADVLLPRPLESNVVLD---VHHIACGVRHAALVTRQGEVFTWGEESGGRLGH 317
+V LG DV+ R + V L V +A G+ H ++ G V+T+G G LG
Sbjct: 44 DVGQLGLGEDVM-ERKKPALVTLPEGIVQAVAGGM-HTVCLSDTGNVYTFGCNDEGALGR 101
Query: 318 GVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSH 377
++ + + + V+ G+ H+ A+T G +Y WG N G++G +
Sbjct: 102 DTSEEGSETVPAKVDLGEKIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKK 161
Query: 378 W-IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG----H----GDRK 428
+P ++ P++ V + G H ++T+ G+L+T G G G LG H G RK
Sbjct: 162 CTVPVKV--PIDK-PVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRK 218
Query: 429 NVSYPREVESL----SGLRTIA-VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
+ E + + G V CG + T AV + G ++ +G + +
Sbjct: 219 GLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSK-----------EGHVYGFGLSNYH 267
Query: 484 RLGHGDKEPRLKPTCVPALIDYNFHKVAC--GHSLTVGLTTSGHVFTMGSTVYGQLGNPN 541
+LG P + + + V G T+ L + G +++G YG+LG
Sbjct: 268 QLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGK 327
Query: 542 ADGKL--PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT 599
G+ P +V V+ +ACGA +T + V++WG G N +LG G+ ED +
Sbjct: 328 DVGEKSEPTVVPGI---SDVQVVACGASVSYAVTKQGSVFSWGMGTNLQLGTGEEEDEWS 384
Query: 600 PALV--EALKDRHVKYIACGSNYSAAICLHK 628
P + + L++R V ++ G ++ + K
Sbjct: 385 PVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 415
Score = 171 (65.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 74/272 (27%), Positives = 118/272 (43%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G VY+WG +N V G + + + V + P++ VV I G H ++T
Sbjct: 138 GGVYVWGSFRDNNGV-IGLLEPMK----KCTVPVKVPIDKPVV----KIVSGNDHLVMLT 188
Query: 300 RQGEVFTWGEESGGRLG----HGVGKD-------IVQPHLLESLTMTSVDF--VTCGEFH 346
GE++T G G+LG H + +++P ++ V F V CG +
Sbjct: 189 AHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYF 248
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQV-ASVTCGPWHTALI 405
T AV+ G +Y G G N LG + + ++P ++S + G HT +
Sbjct: 249 TFAVSKEGHVY--GFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCL 306
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTI-AVACGVWHTAAVVEVIVTQ 464
S G+ ++ G +G LG G K+V E + G+ + VACG A V VT+
Sbjct: 307 NSEGKAYSLGRAEYGRLGLG--KDVGEKSEPTVVPGISDVQVVACG-----ASVSYAVTK 359
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKP 496
G +F+WG G +LG G++E P
Sbjct: 360 Q------GSVFSWGMGTNLQLGTGEEEDEWSP 385
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 48/158 (30%), Positives = 75/158 (47%)
Query: 261 NVNYLGTRAD--VLLPRPLES--NVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG 316
N + LGT++ +P L S N + G H + +G+ ++ G GRLG
Sbjct: 265 NYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLG 324
Query: 317 HGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
+GKD+ +P ++ ++ V V CG + AVT G +++WG GT+ LG G
Sbjct: 325 --LGKDVGEKSEPTVVPGIS--DVQVVACGASVSYAVTKQGSVFSWGMGTNLQ--LGTGE 378
Query: 374 DVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQ 410
+ W P ++G LE V SV+ G HT L+ Q
Sbjct: 379 EEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDKQ 416
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/172 (28%), Positives = 76/172 (44%)
Query: 462 VTQSSASVSSGKLFTWGDGDKNRLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGL 520
V+ S G + G GD +LG G D R KP V + + G TV L
Sbjct: 25 VSHISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVT--LPEGIVQAVAGGMHTVCL 82
Query: 521 TTSGHVFTMGSTVYGQLGNPNAD-GK--LPCLVEDKLAGESVEEIACGAYHVAVLTSRNE 577
+ +G+V+T G G LG ++ G +P V+ GE + +++ G H A LT
Sbjct: 83 SDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVD---LGEKIIQVSAGDSHSAALTEDGG 139
Query: 578 VYTWG--KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAICLH 627
VY WG + NG +G + +K V+ D+ V I G+++ + H
Sbjct: 140 VYVWGSFRDNNGVIGLLEPM-KKCTVPVKVPIDKPVVKIVSGNDHLVMLTAH 190
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 57/188 (30%), Positives = 82/188 (43%)
Query: 409 GQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
G + G G G LG G D P V G+ AVA G+ HT + +
Sbjct: 35 GLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEGI-VQAVAGGM-HTVCLSD-------- 84
Query: 468 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN--FHKVACGHSLTVGLTTSGH 525
+G ++T+G D+ LG E + VPA +D +V+ G S + LT G
Sbjct: 85 ---TGNVYTFGCNDEGALGRDTSEEGSET--VPAKVDLGEKIIQVSAGDSHSAALTEDGG 139
Query: 526 VFTMGS--TVYGQLGNPNADGKLPCLVEDKLA-GESVEEIACGAYHVAVLTSRNEVYTWG 582
V+ GS G +G K C V K+ + V +I G H+ +LT+ E+YT G
Sbjct: 140 VYVWGSFRDNNGVIGLLEPMKK--CTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSG 197
Query: 583 KGANGRLG 590
G G+LG
Sbjct: 198 CGEQGQLG 205
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 229 (85.7 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 84/271 (30%), Positives = 125/271 (46%)
Query: 368 LLGHGTDVSHWIPKRISGPLEGLQVASVTCG--PWHTALI-TSTGQLFTFGDGTFGVLGH 424
LL HG VS +I + EGL + P H T ++T+GD T LGH
Sbjct: 105 LLKHG--VSLYIQDK-----EGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGH 157
Query: 425 GDRKNVSYPREVE--SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDK 482
G + + +P V+ S SG+ V +H+ V ++Q G+++T G G
Sbjct: 158 GSQNSKHHPELVDLFSRSGIYIKQVVLCKFHS-----VFLSQK------GQVYTCGHGPG 206
Query: 483 NRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NP 540
RLGHGD++ L P V L +N +VA TV LT G V+T G ++ QLG P
Sbjct: 207 GRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPP 266
Query: 541 NADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG-DVEDRK 598
+ +P ++ K L G ++ +A G +H VL +R VYT G G+LG D K
Sbjct: 267 PSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG-GQLGCLLDPNGEK 324
Query: 599 ---TPALVEALKDRHVKYIACGSNYSAAICL 626
P V AL + + ++ A +C+
Sbjct: 325 CVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 205 (77.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 78/300 (26%), Positives = 129/300 (43%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV---DFVTCGEFHTCAVTMAGELYTW 359
+V+TWG+ + LGHG P L++ + + + V C +FH+ ++ G++YT
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQVYTC 201
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G G LGHG + + +P+ + G L G + V HT ++T G ++TFG F
Sbjct: 202 GHGP--GGRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIF 258
Query: 420 GVLGH-GDRKNVSYPREVES--LSGLRTIAVACGVWHTAAVV-EVIVTQSSASVSSGKLF 475
LG + + PR++++ L G I VA G +HT E + T G L
Sbjct: 259 HQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLNGGQLGCLL 318
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALI--DYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
D N G+K P V AL D VA TV +TT G ++ +
Sbjct: 319 -----DPN----GEKCVTA-PRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQ 368
Query: 534 YGQLGNPNADGKLPCL----VEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
++ + + K + +E K+ E ++E + + V+ W + N L
Sbjct: 369 CKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCW-RSVNSSL 427
Score = 180 (68.4 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 59/204 (28%), Positives = 96/204 (47%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DVY WG+ N +N + D L R S + + + C H+ +++
Sbjct: 143 DVYTWGDNT--NFTLGHGSQNSKHHPELVD-LFSR---SGIYIK-QVVLCKF-HSVFLSQ 194
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
+G+V+T G GGRLGHG + + P L+E L + V + HT +T G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 361 DGT-HNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQLFTFG--D 416
H G++ + + +P++I L+G + V G +HT L T ++T G
Sbjct: 255 LNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG 311
Query: 417 GTFG-VLGHGDRKNVSYPREVESL 439
G G +L K V+ PR+V +L
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSAL 335
Score = 37 (18.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 571 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH 610
+ +RNE+ + G G E RK+ E L + H
Sbjct: 443 IALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSNLH 482
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 229 (85.7 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 84/271 (30%), Positives = 125/271 (46%)
Query: 368 LLGHGTDVSHWIPKRISGPLEGLQVASVTCG--PWHTALI-TSTGQLFTFGDGTFGVLGH 424
LL HG VS +I + EGL + P H T ++T+GD T LGH
Sbjct: 105 LLKHG--VSLYIQDK-----EGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGH 157
Query: 425 GDRKNVSYPREVE--SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDK 482
G + + +P V+ S SG+ V +H+ V ++Q G+++T G G
Sbjct: 158 GSQNSKHHPELVDLFSRSGIYIKQVVLCKFHS-----VFLSQK------GQVYTCGHGPG 206
Query: 483 NRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NP 540
RLGHGD++ L P V L +N +VA TV LT G V+T G ++ QLG P
Sbjct: 207 GRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPP 266
Query: 541 NADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG-DVEDRK 598
+ +P ++ K L G ++ +A G +H VL +R VYT G G+LG D K
Sbjct: 267 PSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG-GQLGCLLDPNGEK 324
Query: 599 ---TPALVEALKDRHVKYIACGSNYSAAICL 626
P V AL + + ++ A +C+
Sbjct: 325 CVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 205 (77.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 78/300 (26%), Positives = 129/300 (43%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV---DFVTCGEFHTCAVTMAGELYTW 359
+V+TWG+ + LGHG P L++ + + + V C +FH+ ++ G++YT
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQVYTC 201
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G G LGHG + + +P+ + G L G + V HT ++T G ++TFG F
Sbjct: 202 GHGP--GGRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIF 258
Query: 420 GVLGH-GDRKNVSYPREVES--LSGLRTIAVACGVWHTAAVV-EVIVTQSSASVSSGKLF 475
LG + + PR++++ L G I VA G +HT E + T G L
Sbjct: 259 HQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLNGGQLGCLL 318
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALI--DYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
D N G+K P V AL D VA TV +TT G ++ +
Sbjct: 319 -----DPN----GEKCVTA-PRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQ 368
Query: 534 YGQLGNPNADGKLPCL----VEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 589
++ + + K + +E K+ E ++E + + V+ W + N L
Sbjct: 369 CKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCW-RSVNSSL 427
Score = 180 (68.4 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 59/204 (28%), Positives = 96/204 (47%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DVY WG+ N +N + D L R S + + + C H+ +++
Sbjct: 143 DVYTWGDNT--NFTLGHGSQNSKHHPELVD-LFSR---SGIYIK-QVVLCKF-HSVFLSQ 194
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
+G+V+T G GGRLGHG + + P L+E L + V + HT +T G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 361 DGT-HNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQLFTFG--D 416
H G++ + + +P++I L+G + V G +HT L T ++T G
Sbjct: 255 LNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG 311
Query: 417 GTFG-VLGHGDRKNVSYPREVESL 439
G G +L K V+ PR+V +L
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSAL 335
Score = 37 (18.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 571 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRH 610
+ +RNE+ + G G E RK+ E L + H
Sbjct: 443 IALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSNLH 482
>TAIR|locus:2149897 [details] [associations]
symbol:BRXL4 "AT5G20540" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0010089 "xylem development" evidence=RCA]
[GO:0044036 "cell wall macromolecule metabolic process"
evidence=RCA] GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AF296833 HOGENOM:HOG000240563 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AK117133 IPI:IPI00532495 RefSeq:NP_197554.2
UniGene:At.49043 PaxDb:Q8GZ92 PRIDE:Q8GZ92
EnsemblPlants:AT5G20540.1 GeneID:832176 KEGG:ath:AT5G20540
TAIR:At5g20540 eggNOG:NOG313093 InParanoid:Q8GZ92 OMA:ADRSEEM
PhylomeDB:Q8GZ92 ProtClustDB:CLSN2918629 Genevestigator:Q8GZ92
Uniprot:Q8GZ92
Length = 384
Score = 214 (80.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 42/95 (44%), Positives = 60/95 (63%)
Query: 996 NSSCVSESSEGKESMPLQDSENGTRPRSPALSVSS-HQVEAEWIEQYEPGVYITLVALRD 1054
+S V+++ ++ S + RS +SVS+ V+ EW+EQ EPGVYIT+ L
Sbjct: 289 SSISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPG 348
Query: 1055 GTRDLKRVRFSRRRFGEHQAETWWSENREKVYERY 1089
G R+L+RVRFSR RFGE A WW ENR +++E+Y
Sbjct: 349 GKRELRRVRFSRERFGEMHARLWWEENRARIHEQY 383
Score = 186 (70.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 41/95 (43%), Positives = 57/95 (60%)
Query: 1004 SEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVR 1063
S G E+ P S +G P + V + + EW+ Q EPGV IT V+L G DLKR+R
Sbjct: 123 SSG-EATP--KSASGRNRVDPIVFVEEKEPK-EWVAQVEPGVLITFVSLPGGGNDLKRIR 178
Query: 1064 FSRRRFGEHQAETWWSENREKVYERYNVRGLDKSS 1098
FSR F + QA+ WW++N +KV E YNV+ L + +
Sbjct: 179 FSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQA 213
Score = 49 (22.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 890 KSLTAQLKDMAERLPPGVY 908
KSLT+QLKDMA + G Y
Sbjct: 28 KSLTSQLKDMALKAS-GAY 45
Score = 43 (20.2 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 758 SSQAPSLL-QLKDVVLTTAADLRRTTP 783
S A SL QLKD+ L + R TP
Sbjct: 24 SKNAKSLTSQLKDMALKASGAYRHCTP 50
Score = 39 (18.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 295 AALVTRQGEVFTWGEESGGRLGHGVGKDIVQP 326
A T+Q + WG+E RL G+ P
Sbjct: 99 AVAATQQQQPRVWGKEMEARL-KGISSGEATP 129
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 184 (69.8 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 62/256 (24%), Positives = 112/256 (43%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQP---HLLESLTMTS-----VDF 339
I+ G + A V G + WG SG + K P H ++SL + S V
Sbjct: 1120 ISAGCAYCACVV-DGTAYFWGS-SGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHA 1177
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGP 399
+ CG HT +T G LY+ G+ +N LG G + + + L+G+ + + G
Sbjct: 1178 IKCGRQHTLILTNNG-LYSLGN--NNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQ 1234
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
+H A + G+L+ +G G +G LG G +N++ P+ V + + ++ G HT +
Sbjct: 1235 YHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCG 1293
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHS---L 516
+ A+ +LF +G +LG G+ + T +P ++ + H+
Sbjct: 1294 APNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCSLRLIHTKFFT 1353
Query: 517 TVGLTTSGHVFTMGST 532
+ + +FT GS+
Sbjct: 1354 NLAVDEQDRLFTWGSS 1369
Score = 171 (65.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 73/261 (27%), Positives = 112/261 (42%)
Query: 236 CDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHA 295
C G Y WG + A K+ A + L S + L VH I CG +H
Sbjct: 1129 CVVDGTAYFWGSSGIPSYYSA--QKSTEP-PEPAHAVKSLDLLSQLNLQVHAIKCGRQHT 1185
Query: 296 ALVTRQGEVFTWGEESGGRLGHGVGKDI-VQPHLLESLTMTSVDFVTCGEFHTCAVTMAG 354
++T G +++ G + +LG G + +QP L+ +L ++ + G++H AV G
Sbjct: 1186 LILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVA-DG 1243
Query: 355 ELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST------ 408
+LY WG G + G LG G+ + P+ +S + ++ ++ G HT ++
Sbjct: 1244 KLYMWGWGIY--GQLGQGSCENIATPQLVSF-FKFKKILQISLGHAHTLVLCGAPNSHME 1300
Query: 409 -----GQLFTFGDGTFGVLG-----HGDRK-NVSYPREVESLSGLRTIAVACGVWHTAAV 457
+LF FG FG LG HGD K N+ EV S LR I HT
Sbjct: 1301 ANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCS-LRLI-------HTKFF 1352
Query: 458 VEVIVTQSSASVSSGKLFTWG 478
+ V + +LFTWG
Sbjct: 1353 TNLAVDEQD------RLFTWG 1367
Score = 165 (63.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 65/254 (25%), Positives = 107/254 (42%)
Query: 348 CAVTMAGELYTWGDGT----HNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTA 403
CA + G Y WG ++A + +H + LQV ++ CG HT
Sbjct: 1127 CACVVDGTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTL 1186
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRKNVSY-PREVESLSGLRTIAVACGVWHTAAVVEVIV 462
++T+ G L++ G+ LG G ++ P V +L G+ + G +H AAV +
Sbjct: 1187 ILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVAD--- 1242
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGL-- 520
GKL+ WG G +LG G E P V +++ GH+ T+ L
Sbjct: 1243 ---------GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCG 1293
Query: 521 TTSGHV---------FTMGSTVYGQLGNPNAD-GKLPCLVEDKL-AGE-SVEEIACGAYH 568
+ H+ F GS +GQLG N+D G + +L G+ S+ I +
Sbjct: 1294 APNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCSLRLIHTKFFT 1353
Query: 569 VAVLTSRNEVYTWG 582
+ ++ ++TWG
Sbjct: 1354 NLAVDEQDRLFTWG 1367
Score = 150 (57.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDK--EPRLKPTCVPAL-----IDYNFHKVACGHSLTVG 519
A V G + WG K EP V +L ++ H + CG T+
Sbjct: 1128 ACVVDGTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLI 1187
Query: 520 LTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEV 578
LT +G ++++G+ QLG + L ++ L G ++ + G YH A + ++
Sbjct: 1188 LTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKL 1245
Query: 579 YTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAIC 625
Y WG G G+LG G E+ TP LV K + + I+ G ++ +C
Sbjct: 1246 YMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLC 1292
Score = 102 (41.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 25/79 (31%), Positives = 50/79 (63%)
Query: 547 PCLVE-DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKT---PAL 602
P LV+ ++AG + +I+ G +H +++S +YTWGK +LG D +DR+ P+
Sbjct: 1491 PHLVDTSEVAGR-ILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTED-KDRRAVLKPSP 1548
Query: 603 VEALKDRHVKYIACGSNYS 621
++++ +R + Y+ CGS+++
Sbjct: 1549 IDSI-ERPM-YVDCGSDFT 1565
Score = 90 (36.7 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPR--LKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVF 527
SS L+TWG +++LG DK+ R LKP+ + + I+ + V CG T+ +TT V
Sbjct: 1518 SSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDS-IERPMY-VDCGSDFTLVMTTDHVVR 1575
Query: 528 TMGSTVYGQLG 538
G GQ G
Sbjct: 1576 AFGGNSNGQCG 1586
Score = 62 (26.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEE---IACGAYHVAVLTSRN 576
+++S ++T G + QLG + D + L + +S+E + CG+ V+T+ +
Sbjct: 1516 ISSSCTLYTWGKNLEHQLGTEDKDRRA-VLKPSPI--DSIERPMYVDCGSDFTLVMTTDH 1572
Query: 577 EVYTWGKGANGRLG 590
V +G +NG+ G
Sbjct: 1573 VVRAFGGNSNGQCG 1586
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 198 (74.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 70/237 (29%), Positives = 110/237 (46%)
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLS-GLRTI-AVACGVWHTAAVV 458
H+ LI + G ++G LG G +++V P+ ++ +S + I ++A G H+A
Sbjct: 7 HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSA--- 63
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTV 518
++T +G+LF G +LG E L T AL + +VACG T+
Sbjct: 64 --VIT------GAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTI 115
Query: 519 GLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEE----IACGAYHVAVLTS 574
L +G V + GS +GQLG P G PCL+ K+ +S++E IA G H T
Sbjct: 116 ILGRAGLVLSCGSNAFGQLGVPQISG--PCLIPQKIK-QSLKEKAVGIAAGLRHALAATE 172
Query: 575 RNEVYTWGKGANGR---LGHGDVED----RKTPALVEALKDRHVKYIACGSNYSAAI 624
V+ WG G R + G K P ++ L+D VK +A GS + ++
Sbjct: 173 SGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSL 229
Score = 178 (67.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 74/250 (29%), Positives = 108/250 (43%)
Query: 286 HHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDF--VTCG 343
++IAC H+ L+ R V G S G+LG G +D++ P LL+ ++ D + G
Sbjct: 2 NNIAC---HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGG 58
Query: 344 EFHTCAVTMAGELYTWGDGTHN-AGLLG--HGTDVSHWIPKRISGPLEGLQVASVTCGPW 400
H+ +T AGEL+ G HN AG LG H DV + + L G V V CG W
Sbjct: 59 GGHSAVITGAGELFVCG---HNKAGQLGLNHTEDVLCFT---LCTALSGFCVQEVACG-W 111
Query: 401 H-TALITSTGQLFTFGDGTFGVLGHGDRKNVSY-PREVESLSGLRTIAVACGVWHTAAVV 458
T ++ G + + G FG LG P++++ + + +A G+ H A
Sbjct: 112 DFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAVGIAAGLRHALAAT 171
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNR---LGHGDKEP---RLKPTC-VPALIDYNFHKVA 511
E SG +F WG G +R + G P K C + L D +VA
Sbjct: 172 E-----------SGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVA 220
Query: 512 CGHSLTVGLT 521
G V LT
Sbjct: 221 AGSYHCVSLT 230
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 58/204 (28%), Positives = 93/204 (45%)
Query: 265 LGTRADVLLPRPLE--SNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKD 322
LG + DVL+P+ L+ S D+ IA G H+A++T GE+F G G+LG +D
Sbjct: 30 LGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTED 89
Query: 323 IVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSH--WIP 380
++ L +L+ V V CG T + AG + + G G LG +S IP
Sbjct: 90 VLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAF--GQLGV-PQISGPCLIP 146
Query: 381 KRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV---LGHGDRKNVSY----P 433
++I L+ V + G H T +G +F +G G + G V + P
Sbjct: 147 QKIKQSLKEKAVG-IAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEP 205
Query: 434 REVESLSGLRTIAVACGVWHTAAV 457
E++ L ++ VA G +H ++
Sbjct: 206 CEIKGLEDVKVKRVAAGSYHCVSL 229
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 241 (89.9 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 84/269 (31%), Positives = 126/269 (46%)
Query: 368 LLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI-TSTGQLFTFGDGTFGVLGHGD 426
LL HG + + K PL+ L P H T +++T+GD T LGHG
Sbjct: 105 LLKHGVSL-YMQDKEGLSPLDLLMKDR----PTHVVFKDTDPTEVYTWGDNTNFTLGHGS 159
Query: 427 RKNVSYPREVE--SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNR 484
+ + +P ++ S SG+ V +H+ V ++Q G+++T G G R
Sbjct: 160 QNSKHHPELLDLFSRSGVYVKQVVLCKFHS-----VFLSQK------GQVYTCGHGRGGR 208
Query: 485 LGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNA 542
LGHGD++ L P V L +N +VA TV LT G V+T G ++ QLG P A
Sbjct: 209 LGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPA 268
Query: 543 DGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG-DVEDRK-- 598
+P ++ K L G ++ +A G +H VL +R VYT G G+LGH D K
Sbjct: 269 SCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLNG-GQLGHLLDPNGEKCV 326
Query: 599 -TPALVEALKDRHVKYIACGSNYSAAICL 626
TP V AL + + ++ A +C+
Sbjct: 327 TTPRQVSALHHKDIAVSLVAASDGATVCV 355
Score = 210 (79.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 72/236 (30%), Positives = 107/236 (45%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV---DFVTCGEFHTCAVTMAGELYTW 359
EV+TWG+ + LGHG P LL+ + + V V C +FH+ ++ G++YT
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLC-KFHSVFLSQKGQVYTC 201
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G G LGHG + + +P+ + G L G + V HT ++T G ++TFG F
Sbjct: 202 GHG--RGGRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMF 258
Query: 420 GVLGH-GDRKNVSYPREVES--LSGLRTIAVACGVWHTAAVV-EVIVTQSSASVSSGKLF 475
LG + + PR++++ L G I VA G +HT E + T G L
Sbjct: 259 HQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTLGLNGGQLGHLL 318
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALI--DYNFHKVACGHSLTVGLTTSGHVFTM 529
D N G+K P V AL D VA TV +TT G ++ +
Sbjct: 319 -----DPN----GEKCVTT-PRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLL 364
Score = 179 (68.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 64/215 (29%), Positives = 104/215 (48%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
+VY WG+ N +N + D L R S V + + C H+ +++
Sbjct: 143 EVYTWGDNT--NFTLGHGSQNSKHHPELLD-LFSR---SGVYVK-QVVLCKF-HSVFLSQ 194
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
+G+V+T G GGRLGHG + + P L+E L+ + V + HT +T G +YT+G
Sbjct: 195 KGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFG 254
Query: 361 -DGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQLFTFG-DG 417
+ H G++ + +P++I L+G + V G +HT L T ++T G +G
Sbjct: 255 LNMFHQLGIIPPPASCN--VPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG 311
Query: 418 TFGVLGH----GDRKNVSYPREVESLSGLRTIAVA 448
G LGH K V+ PR+V +L + IAV+
Sbjct: 312 --GQLGHLLDPNGEKCVTTPRQVSALHH-KDIAVS 343
Score = 39 (18.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 818 GLSFSKSITDSLKKTNELLNQEVLKLRAQVESLRQRCEF 856
GLS S + ++ NE +N K +++ +++C F
Sbjct: 729 GLSNLSSRLEGVRLENEKINVIAKKTGNKLKLSQKKCSF 767
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 220 (82.5 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 90/332 (27%), Positives = 148/332 (44%)
Query: 316 GHGVGKDIVQ--PHLLE-SLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHG 372
G V D+++ P +E +L+ V V C + T A+T G +TWG + G+LG+
Sbjct: 152 GDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS 211
Query: 373 TDVSHWIPKRISGPLEGL--QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHG--DRK 428
KR + P + ++ + G H +T+TG+++T+G+G LG +R+
Sbjct: 212 DS-----QKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERR 266
Query: 429 NVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
+ + L+ I+V G +H+ A+ + G T G +
Sbjct: 267 RLQ-GLTPQPLALKNIISVGAGSYHSFAI-----DNKGRVYAWGLNITRQCGIEVE---D 317
Query: 489 DKEPRL--KPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKL 546
++E + KPT V AL YN + G T+ L G V G QLG P D L
Sbjct: 318 EEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIP--DNAL 375
Query: 547 P-CLVEDK------------LAG-ESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 592
P +V+D+ + G +V ++ CG +H +TS +VY+WG N +G G
Sbjct: 376 PETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQG 435
Query: 593 DV-EDRKTPALV--EALKDRHVKYIACGSNYS 621
D ED P LV +A+K+ ++ G +S
Sbjct: 436 DNDEDVAVPTLVRSKAIKEVAIRVAGAGGQFS 467
Score = 206 (77.6 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 92/332 (27%), Positives = 149/332 (44%)
Query: 252 NVVKAGADKNVNYLGT---RADVLL-PR--PLESNVVLDVHHIACGVRHAALVTRQGEVF 305
NV G+ ++N LG DV+ PR P+ S + V +A G H+A ++ G V+
Sbjct: 72 NVYVFGSG-SMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVY 130
Query: 306 TWGEESG---GRL--------GHGVGKDIVQ--PHLLE-SLTMTSVDFVTCGEFHTCAVT 351
TWG GRL G V D+++ P +E +L+ V V C + T A+T
Sbjct: 131 TWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAIT 190
Query: 352 MAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL--QVASVTCGPWHTALITSTG 409
G +TWG + G+LG+ KR + P + ++ + G H +T+TG
Sbjct: 191 DNGCCFTWGTFRCSDGVLGYSDS-----QKRTAEPTQMRLPEICQLATGTDHIIALTTTG 245
Query: 410 QLFTFGDGTFGVLGHG--DRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
+++T+G+G LG +R+ + + L+ I+V G +H+ A+
Sbjct: 246 KVYTWGNGQQFQLGRRMLERRRLQ-GLTPQPLALKNIISVGAGSYHSFAID--------- 295
Query: 468 SVSSGKLFTWGDGDKNRLG---HGDKEPRL--KPTCVPALIDYNFHKVACGHSLTVGLTT 522
+ G+++ WG + G ++E + KPT V AL YN + G T+ L
Sbjct: 296 --NKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLE 353
Query: 523 SGHVFTMGSTVYGQLGNPNADGKLP-CLVEDK 553
G V G QLG P D LP +V+D+
Sbjct: 354 DGRVLAWGRDDRHQLGIP--DNALPETVVKDE 383
Score = 196 (74.1 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 75/287 (26%), Positives = 133/287 (46%)
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL---EGLQVASVTCGPWHTALITSTGQLF 412
+Y +G G+ N LG G + + + P+ + + V + G H+A ++ G+++
Sbjct: 73 VYVFGSGSMNE--LGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVY 130
Query: 413 TFGDGTFGVLGH--GDRKNVSYPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQS--SA 467
T+G LG D+K+ + + + + L G T + G V +VI + + +A
Sbjct: 131 TWGVNDDYALGRLTKDQKDENGDKVDNDLLEG--TPSKVEGALSHLRVTKVICSDNLTAA 188
Query: 468 SVSSGKLFTWGDG--DKNRLGHGDKEPRLKPTCVPALIDY-NFHKVACGHSLTVGLTTSG 524
+G FTWG LG+ D + R T P + ++A G + LTT+G
Sbjct: 189 ITDNGCCFTWGTFRCSDGVLGYSDSQKR---TAEPTQMRLPEICQLATGTDHIIALTTTG 245
Query: 525 HVFTMGSTVYGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGK 583
V+T G+ QLG + + L L LA +++ + G+YH + ++ VY WG
Sbjct: 246 KVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGL 305
Query: 584 GANGRLGHGDVEDRKT------PALVEALKDRHVKYIACGSNYSAAI 624
+ G +VED + P LV+AL+ +VK I G +++ A+
Sbjct: 306 NITRQCGI-EVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLAL 351
Score = 171 (65.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 69/242 (28%), Positives = 111/242 (45%)
Query: 404 LITSTGQLFTFGDGTFGVLGHGDRK-NVSY-PR--EVESLSGLRTIAVACGVWHTAAVVE 459
L T ++ FG G+ LG G+ + +V Y PR + S + + +A G H+AA+
Sbjct: 66 LPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSH 125
Query: 460 VIVTQSSASVSSGKLFTWGDGDKNRLG---------HGDKEPR--LK--PTCVP-ALIDY 505
G+++TWG D LG +GDK L+ P+ V AL
Sbjct: 126 -----------DGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHL 174
Query: 506 NFHKVACGHSLTVGLTTSGHVFTMGS--TVYGQLGNPNADGKLPCLVEDKLAGESVEEIA 563
KV C +LT +T +G FT G+ G LG ++ + + +L + ++A
Sbjct: 175 RVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP--EICQLA 232
Query: 564 CGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALV-EALKDRHVKYIACGSNYSA 622
G H+ LT+ +VYTWG G +LG +E R+ L + L +++ + GS +S
Sbjct: 233 TGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSF 292
Query: 623 AI 624
AI
Sbjct: 293 AI 294
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 215 (80.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 81/320 (25%), Positives = 127/320 (39%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE-SLTMTSVDFVTCGEFHTCAVTM 352
H+A+ + WG G+LG G P L S F T G HT A+
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFAT-GASHTLAIAR 100
Query: 353 ---AGELYTWGDGTHNAGLLGH--GTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
+ WG +++AG +G T + P +I G G V V G H+ +
Sbjct: 101 FDNVSGVRAWG--SNSAGQIGRDPATVPTSSTPVKIGG--FGGAVQQVAAGGLHSMALAG 156
Query: 408 TGQLFTFGDGTFGVLGHGDRKNVSY--PREVESLS-GLRTIAVACGVWHTAAVVEVIVTQ 464
G ++ +G + G L + + PR+VE+ + A+ G H+ A
Sbjct: 157 -GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAY------- 208
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
+S + + WG+ +LG+G P V K++ G S + L ++G
Sbjct: 209 -----TSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTG 263
Query: 525 HVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGK 583
++ GS YGQLGN + + AG + ++ G H + S VYTWG
Sbjct: 264 AIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGF 323
Query: 584 GANGRLGHGDVEDRKTPALV 603
G L G D+ +PA V
Sbjct: 324 NTLGLLSVGTTGDQLSPAQV 343
Score = 193 (73.0 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 78/350 (22%), Positives = 135/350 (38%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVF---TWGEESGGRLGHGVGKD 322
GT P+ L A G H + R V WG S G++G
Sbjct: 66 GTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATV 125
Query: 323 IVQ--PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP 380
P + +V V G H+ A+ G ++ WG + L + + + P
Sbjct: 126 PTSSTPVKIGGFG-GAVQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAP 183
Query: 381 KRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLS 440
+++ + ++ G H+ TST + + +G+ G LG+G + P++V+ S
Sbjct: 184 RQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPS 242
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT--C 498
+ ++ G H A+ S+G ++ WG +LG+G + P
Sbjct: 243 SITIRKISAGGSHNLALD-----------STGAIWAWGSNAYGQLGNGTTTNQSTPVQLT 291
Query: 499 VPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVED--KLA 555
+PA + F V G S +V + ++ V+T G G L D P V D +
Sbjct: 292 LPAGVT-GFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVP 350
Query: 556 GESVEEIAC-GAYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTPALV 603
VE + G++ V + + ++ WG G+LG G +R P V
Sbjct: 351 FTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQV 400
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/261 (24%), Positives = 108/261 (41%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLES-NVVLDVHHIACGVRHAALV 298
G V+ WG N AG +N + + A PR +E+ + + I G H+
Sbjct: 157 GTVWAWGS----N--SAG-QLALNPISS-ATRFAPRQVETAKLPIAPTAIVAGGSHSIAY 208
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
T E + WG + G+LG+G P ++ + ++ ++ G H A+ G ++
Sbjct: 209 TST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWA 267
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG+GT + P +++ P V GP H+ + S ++T+G T
Sbjct: 268 WGSNAY--GQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNT 325
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G+L G + P +V S + V V IV ++ SG ++ WG
Sbjct: 326 LGLLSVGTTGDQLSPAQVRDASNVPFTDVERVV--LLGSFFTIVKKNG----SGGMWAWG 379
Query: 479 DGDKNRLGHGDKEPRLKPTCV 499
+LG G R P V
Sbjct: 380 YNGYGQLGDGTTSNRTAPVQV 400
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 65/247 (26%), Positives = 101/247 (40%)
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEV 460
H+A+ + L +G+ G LG G + + P+ + + A G HT A+
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARF 101
Query: 461 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTC-VPALIDYNF----HKVACG-- 513
+VS + WG ++G ++P PT P I F +VA G
Sbjct: 102 ------DNVSGVR--AWGSNSAGQIG---RDPATVPTSSTPVKIG-GFGGAVQQVAAGGL 149
Query: 514 HSLTVGLTTSGHVFTMGSTVYGQLG-NP--NADGKLPCLVEDKLAGESVEEIACGAYHVA 570
HS+ + G V+ GS GQL NP +A P VE + I G H
Sbjct: 150 HSMALA---GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSI 206
Query: 571 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI----CL 626
TS E Y WG A+G+LG+G P V+ ++ I+ G +++ A+ +
Sbjct: 207 AYTS-TEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAI 265
Query: 627 HKWVSSA 633
W S+A
Sbjct: 266 WAWGSNA 272
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 215 (80.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 81/320 (25%), Positives = 127/320 (39%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLE-SLTMTSVDFVTCGEFHTCAVTM 352
H+A+ + WG G+LG G P L S F T G HT A+
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFAT-GASHTLAIAR 100
Query: 353 ---AGELYTWGDGTHNAGLLGH--GTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
+ WG +++AG +G T + P +I G G V V G H+ +
Sbjct: 101 FDNVSGVRAWG--SNSAGQIGRDPATVPTSSTPVKIGG--FGGAVQQVAAGGLHSMALAG 156
Query: 408 TGQLFTFGDGTFGVLGHGDRKNVSY--PREVESLS-GLRTIAVACGVWHTAAVVEVIVTQ 464
G ++ +G + G L + + PR+VE+ + A+ G H+ A
Sbjct: 157 -GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAY------- 208
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
+S + + WG+ +LG+G P V K++ G S + L ++G
Sbjct: 209 -----TSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTG 263
Query: 525 HVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGES-VEEIACGAYHVAVLTSRNEVYTWGK 583
++ GS YGQLGN + + AG + ++ G H + S VYTWG
Sbjct: 264 AIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGF 323
Query: 584 GANGRLGHGDVEDRKTPALV 603
G L G D+ +PA V
Sbjct: 324 NTLGLLSVGTTGDQLSPAQV 343
Score = 193 (73.0 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 78/350 (22%), Positives = 135/350 (38%)
Query: 266 GTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVF---TWGEESGGRLGHGVGKD 322
GT P+ L A G H + R V WG S G++G
Sbjct: 66 GTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATV 125
Query: 323 IVQ--PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP 380
P + +V V G H+ A+ G ++ WG + L + + + P
Sbjct: 126 PTSSTPVKIGGFG-GAVQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAP 183
Query: 381 KRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLS 440
+++ + ++ G H+ TST + + +G+ G LG+G + P++V+ S
Sbjct: 184 RQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPS 242
Query: 441 GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT--C 498
+ ++ G H A+ S+G ++ WG +LG+G + P
Sbjct: 243 SITIRKISAGGSHNLALD-----------STGAIWAWGSNAYGQLGNGTTTNQSTPVQLT 291
Query: 499 VPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVED--KLA 555
+PA + F V G S +V + ++ V+T G G L D P V D +
Sbjct: 292 LPAGVT-GFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVP 350
Query: 556 GESVEEIAC-GAYHVAVLTSRNE-VYTWGKGANGRLGHGDVEDRKTPALV 603
VE + G++ V + + ++ WG G+LG G +R P V
Sbjct: 351 FTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQV 400
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/261 (24%), Positives = 108/261 (41%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLES-NVVLDVHHIACGVRHAALV 298
G V+ WG N AG +N + + A PR +E+ + + I G H+
Sbjct: 157 GTVWAWGS----N--SAG-QLALNPISS-ATRFAPRQVETAKLPIAPTAIVAGGSHSIAY 208
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
T E + WG + G+LG+G P ++ + ++ ++ G H A+ G ++
Sbjct: 209 TST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWA 267
Query: 359 WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
WG + G LG+GT + P +++ P V GP H+ + S ++T+G T
Sbjct: 268 WGSNAY--GQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNT 325
Query: 419 FGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWG 478
G+L G + P +V S + V V IV ++ SG ++ WG
Sbjct: 326 LGLLSVGTTGDQLSPAQVRDASNVPFTDVERVV--LLGSFFTIVKKNG----SGGMWAWG 379
Query: 479 DGDKNRLGHGDKEPRLKPTCV 499
+LG G R P V
Sbjct: 380 YNGYGQLGDGTTSNRTAPVQV 400
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 65/247 (26%), Positives = 101/247 (40%)
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEV 460
H+A+ + L +G+ G LG G + + P+ + + A G HT A+
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARF 101
Query: 461 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTC-VPALIDYNF----HKVACG-- 513
+VS + WG ++G ++P PT P I F +VA G
Sbjct: 102 ------DNVSGVR--AWGSNSAGQIG---RDPATVPTSSTPVKIG-GFGGAVQQVAAGGL 149
Query: 514 HSLTVGLTTSGHVFTMGSTVYGQLG-NP--NADGKLPCLVEDKLAGESVEEIACGAYHVA 570
HS+ + G V+ GS GQL NP +A P VE + I G H
Sbjct: 150 HSMALA---GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSI 206
Query: 571 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI----CL 626
TS E Y WG A+G+LG+G P V+ ++ I+ G +++ A+ +
Sbjct: 207 AYTS-TEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAI 265
Query: 627 HKWVSSA 633
W S+A
Sbjct: 266 WAWGSNA 272
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 237 (88.5 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 85/271 (31%), Positives = 127/271 (46%)
Query: 368 LLGHGTDVSHWIPKRISGPLEGLQVASVTCG--PWHTALI-TSTGQLFTFGDGTFGVLGH 424
LL HG VS +I + EGL + P H T ++T+GD T LGH
Sbjct: 105 LLKHG--VSLYIQDK-----EGLSALDLLMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGH 157
Query: 425 GDRKNVSYPREVE--SLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDK 482
G + + +P V+ S SG+ V +H+ V ++Q G+++T G G
Sbjct: 158 GSQNSKHHPELVDLFSRSGVYIKQVVLCKFHS-----VFLSQK------GQVYTCGHGPG 206
Query: 483 NRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NP 540
RLGHGD++ L P V L +N +VA TV LT G V+T G ++ QLG P
Sbjct: 207 GRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPP 266
Query: 541 NADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG-DVEDRK 598
++ +P ++ K L G ++ +A G +H VL +R VYT G G+LGH D K
Sbjct: 267 PSNCNVPRQMQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLNG-GQLGHLLDPSGEK 324
Query: 599 ---TPALVEALKDRHVKYIACGSNYSAAICL 626
P V AL + + ++ A +C+
Sbjct: 325 CVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 182 (69.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 61/206 (29%), Positives = 100/206 (48%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DVY WG+ N +N + D L R S V + + C H+ +++
Sbjct: 143 DVYTWGDNT--NFTLGHGSQNSKHHPELVD-LFSR---SGVYIK-QVVLCKF-HSVFLSQ 194
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
+G+V+T G GGRLGHG + + P L+E L+ + V + HT +T G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 361 DGT-HNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQLFTFG-DG 417
H G++ ++ + +P+++ L+G + V G +HT L T ++T G +G
Sbjct: 255 LNIFHQLGIIPPPSNCN--VPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG 311
Query: 418 TFGVLGH----GDRKNVSYPREVESL 439
G LGH K V+ PR+V +L
Sbjct: 312 --GQLGHLLDPSGEKCVTAPRQVSAL 335
Score = 37 (18.1 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 818 GLSFSKSITDSLKKTNELLNQEVLKLRAQVESLRQRCEF 856
G S S D ++ NE +N K +++ +++C F
Sbjct: 726 GFSNLSSRLDGVRFENEEINVIAKKTGNKLKLSQKKCSF 764
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 230 (86.0 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 77/251 (30%), Positives = 117/251 (46%)
Query: 388 EGLQVASVTCG--PWHTALI-TSTGQLFTFGDGTFGVLGHGDRKNVSYPREVE--SLSGL 442
EGL + P H T ++T+GD T LGHG + + +P V+ S SG+
Sbjct: 118 EGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGI 177
Query: 443 RTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPAL 502
V +H+ V ++Q G+++T G G RLGHGD++ L P V L
Sbjct: 178 YIKQVVLCKFHS-----VFLSQK------GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGL 226
Query: 503 IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NPNADGKLPCLVEDK-LAGESV 559
+N +VA TV LT G V+T G ++ QLG P + +P ++ K L G ++
Sbjct: 227 SGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTI 286
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG-DVEDRK---TPALVEALKDRHVKYIA 615
+A G +H VL +R VYT G G+LG+ D K P V AL + +
Sbjct: 287 IGVAAGRFHT-VLWTREAVYTMGLNG-GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSL 344
Query: 616 CGSNYSAAICL 626
++ A +C+
Sbjct: 345 VAASDGATVCV 355
Score = 207 (77.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 77/292 (26%), Positives = 126/292 (43%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV---DFVTCGEFHTCAVTMAGELYTW 359
+V+TWG+ + LGHG P L++ + + + V C +FH+ ++ G++YT
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQVYTC 201
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G G LGHG + + +P+ + G L G + V HT ++T G ++TFG F
Sbjct: 202 GHGP--GGRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIF 258
Query: 420 GVLGH-GDRKNVSYPREVES--LSGLRTIAVACGVWHTAAVV-EVIVTQSSASVSSGKLF 475
LG + + PR++++ L G I VA G +HT E + T G L
Sbjct: 259 HQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLNGGQLGYLL 318
Query: 476 TWGDGDKNRLGHGDKEPRLKPTCVPALI--DYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
D N G+K P V AL D VA TV +TT G ++ +
Sbjct: 319 -----DPN----GEKCVTA-PRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQ 368
Query: 534 YGQLGNPNADGKLPCL----VEDKLAGESVEEIACGAYHVAVLTSRNEVYTW 581
+L + + K + +E K+ E ++E + + V+ W
Sbjct: 369 CKKLASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCW 420
Score = 180 (68.4 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 59/204 (28%), Positives = 97/204 (47%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
DVY WG+ N +N + D L R S + + + C H+ +++
Sbjct: 143 DVYTWGDNT--NFTLGHGSQNSKHHPELVD-LFSR---SGIYIK-QVVLCKF-HSVFLSQ 194
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
+G+V+T G GGRLGHG + + P L+E L+ + V + HT +T G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 361 DGT-HNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQLFTFG--D 416
H GL+ + + +P+++ L+G + V G +HT L T ++T G
Sbjct: 255 LNIFHQLGLIPPPSSCN--VPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG 311
Query: 417 GTFG-VLGHGDRKNVSYPREVESL 439
G G +L K V+ PR+V +L
Sbjct: 312 GQLGYLLDPNGEKCVTAPRQVSAL 335
Score = 37 (18.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 1033 VEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVR 1092
+E I Y+ G I+ + + DG LK + + E + ++ ++K +R +
Sbjct: 934 MERRVITPYQDGPDISYLDVEDGDIFLKEEVNMEQNYSESMVKKTKTKAKKKPRKRSDSS 993
Query: 1093 G 1093
G
Sbjct: 994 G 994
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 210 (79.0 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 49/138 (35%), Positives = 74/138 (53%)
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
+G VF WG + G+LG +D P ++ L V +++CGE HT +T +G ++T+G
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT-ALITSTGQLFTFGDGTF 419
G+ G LGH + P+R+ L G +V + CG HT A + S+G ++ FG G
Sbjct: 83 AGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 420 GVLGHGDRKNVSYPREVE 437
G LG G NV P V+
Sbjct: 140 GQLGTGHTCNVKCPSPVK 157
Score = 195 (73.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 51/143 (35%), Positives = 74/143 (51%)
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
+ G +F WG + +LG D+E R P V L ++CG T LT SG VFT
Sbjct: 22 AEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 81
Query: 530 GSTVYGQLGNPNADGKL-PCLVEDKLAGESVEEIACGAYH-VAVLTSRNEVYTWGKGANG 587
G+ GQLG+ + + ++ P V + L G V +IACG H +A + S +Y +G GA G
Sbjct: 82 GAGSCGQLGHDSMNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKG 140
Query: 588 RLGHGDVEDRKTPALVEALKDRH 610
+LG G + K P+ V+ H
Sbjct: 141 QLGTGHTCNVKCPSPVKGYWAAH 163
Score = 184 (69.8 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 48/135 (35%), Positives = 67/135 (49%)
Query: 354 GELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
G ++ WG +NAG LG + P + L +V ++CG HTA++T +G +FT
Sbjct: 24 GAVFGWG--MNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 414 FGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
FG G+ G LGH + PR V L G +ACG HT A V SSG
Sbjct: 81 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP----------SSGL 130
Query: 474 LFTWGDGDKNRLGHG 488
++ +G G K +LG G
Sbjct: 131 IYAFGCGAKGQLGTG 145
Score = 160 (61.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/101 (39%), Positives = 52/101 (51%)
Query: 524 GHVFTMGSTVYGQLG-NPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
G VF G GQLG + D + PC V+ L + V I+CG H AVLT V+T+G
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 583 KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
G+ G+LGH + D P V L V IACG ++ A
Sbjct: 83 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 123
Score = 153 (58.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 38/102 (37%), Positives = 53/102 (51%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGE 344
V +I+CG H A++T+ G VFT+G S G+LGH D V P + L + V + CG
Sbjct: 59 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 118
Query: 345 FHTCA-VTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG 385
HT A V +G +Y +G G G LG G + P + G
Sbjct: 119 QHTLAFVPSSGLIYAFGCGAK--GQLGTGHTCNVKCPSPVKG 158
Score = 50 (22.7 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 588 RLGHGDVEDRKT-PA--LVEALKDRHVKYIACGSNYSAAICLHKWVSS 632
R +G +E +K P V KD +++ NY I +H+W ++
Sbjct: 676 RESYGVIEQKKLIPGGDKVTVCKDNRQEFVDAYVNYVFQISVHEWYTA 723
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 166 (63.5 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 41/163 (25%), Positives = 79/163 (48%)
Query: 278 ESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV 337
+ NVV+ H + G +H+ G++++WG GRLG G K +P L++ L +
Sbjct: 437 KKNVVI---HCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRI 493
Query: 338 DFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD-VSHWIPKRISGPLEGLQVASVT 396
+V G H+ + +YTWG+G LGHG D + + PK + +V ++
Sbjct: 494 LYVCAGTSHSGCIDSNYNVYTWGNGKFYK--LGHGNDDIDIYYPKLVECLNHNKKVCMLS 551
Query: 397 CGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVS-YPREVES 438
G +++ + G ++ +G TF + + +S P+++ +
Sbjct: 552 FGCFNSLALNVKGDVYVWG--TFNITNNYVNYYISKLPKQINT 592
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
A + G L++WG + +G+G + +PT P ++ HS+ +G
Sbjct: 363 AICTGGVLYSWGYNNFGCIGNGTNQNVYEPT--PIFLE--------PHSVD----NNGD- 407
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIA--C--GAYHVAVLTSRNEVYTWG 582
Y N N+ K ED + + + + C G+ H ++Y+WG
Sbjct: 408 --NNDDDYDDDNNNNSTYKFH-KKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIYSWG 464
Query: 583 KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G NGRLG G+++ P L++ L+++ + Y+ G+++S I
Sbjct: 465 YGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCI 506
Score = 128 (50.1 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 46/183 (25%), Positives = 83/183 (45%)
Query: 236 CDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHA 295
C+ GD+Y WG + + G K+ N + ++ + L + +L ++ G H+
Sbjct: 454 CNLHGDIYSWGYG-GNGRLGLGNIKSYN----KPQLI--KGLRNKRIL---YVCAGTSHS 503
Query: 296 ALVTRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTS-VDFVTCGEFHTCAVTMA 353
+ V+TWG +LGHG DI P L+E L V ++ G F++ A+ +
Sbjct: 504 GCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVK 563
Query: 354 GELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
G++Y WG + + +S +PK+I+ + S+ + IT G L +
Sbjct: 564 GDVYVWGTFNITNNYVNYY--ISK-LPKQIN---TNYKCISIHASTYVCFGITLVGDLIS 617
Query: 414 FGD 416
FG+
Sbjct: 618 FGN 620
Score = 121 (47.7 bits), Expect = 7.8e-09, Sum P(4) = 7.8e-09
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G +++WG G RLG G+ + KP + L + V G S + + ++ +V+T G+
Sbjct: 458 GDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGN 517
Query: 532 TVYGQLGNPNADGKL--PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
+ +LG+ N D + P LVE + V ++ G ++ L + +VY WG
Sbjct: 518 GKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 115 (45.5 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 517 TVGLTTSGHVFTMGSTVYGQLGNPNADGK----LPCLVEDKLAGESVEEIACGAYHVAVL 572
+V L SG V+T G G+LGN + K +P L+ + + +IACG +V +
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN--ICVNKIIKIACGYNYVLCV 821
Query: 573 TSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ VY WGK +LG G ++D P V+ L + V I G ++SA I
Sbjct: 822 SDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI 871
Score = 112 (44.5 bits), Expect = 6.4e-08, Sum P(4) = 6.4e-08
Identities = 36/114 (31%), Positives = 54/114 (47%)
Query: 514 HSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVL 572
HSL L G +++ G G+LG N P L++ L + + + G H +
Sbjct: 450 HSLACNL--HGDIYSWGYGGNGRLGLGNIKSYNKPQLIKG-LRNKRILYVCAGTSHSGCI 506
Query: 573 TSRNEVYTWGKGANGRLGHGDVE-DRKTPALVEALK-DRHVKYIACGSNYSAAI 624
S VYTWG G +LGHG+ + D P LVE L ++ V ++ G S A+
Sbjct: 507 DSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLAL 560
Score = 111 (44.1 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 37/145 (25%), Positives = 67/145 (46%)
Query: 392 VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGV 451
V + G H+ G ++++G G G LG G+ K+ + P+ ++ L R + V G
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGT 500
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID-YNFHKV 510
H+ + S+ +V +TWG+G +LGHG+ + + P L++ N +K
Sbjct: 501 SHSGCI------DSNYNV-----YTWGNGKFYKLGHGNDDIDIY---YPKLVECLNHNKK 546
Query: 511 ACGHSL----TVGLTTSGHVFTMGS 531
C S ++ L G V+ G+
Sbjct: 547 VCMLSFGCFNSLALNVKGDVYVWGT 571
Score = 105 (42.0 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
T + F++CG+ HT A+ G LY+WG +N G +G+GT+ + + P I
Sbjct: 349 TKIKFISCGDMHTLAICTGGVLYSWG--YNNFGCIGNGTNQNVYEPTPI 395
Score = 99 (39.9 bits), Expect = 7.8e-09, Sum P(4) = 7.8e-09
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
P +I P + ++ ++CG HT I + G L+++G FG +G+G +NV P +
Sbjct: 339 PMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 96 (38.9 bits), Expect = 9.1e-11, Sum P(4) = 9.1e-11
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 551 EDKLAGESVEEIACGAYHVAV-LTSRNEVYTWGKGANGRLGHGDVEDRK---TPALVEAL 606
++KL +S +I G+ H +V L +VYT G NG LG+G+ +K P L+
Sbjct: 745 KNKLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNIC 804
Query: 607 KDRHVKYIACGSNYSAAICL 626
++ +K IACG NY +C+
Sbjct: 805 VNKIIK-IACGYNY--VLCV 821
Score = 80 (33.2 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV--PALIDY--NFHKVACGHSLTVGLTT 522
+S G L+ WG+ + ++G G + C+ P I+ +K + G+S ++ LT
Sbjct: 900 SSDECGDLYIWGNAESGKVGLGVDYTQ---GCILLPRKINIINKIYKCSLGNSHSLFLTN 956
Query: 523 SGHVFTMGSTVYGQLGNPNADGKLPC---LVEDKLAGES---VEEIACGAYHVAVLTSRN 576
+ ++ GS G+LG K+ C V K+ + +++I G + +L+
Sbjct: 957 TNELYVCGSNNNGRLGLFEKS-KMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDG 1015
Query: 577 EVYTWG---KGANG 587
+Y +G KG+NG
Sbjct: 1016 FIYIFGEFIKGSNG 1029
Score = 78 (32.5 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV---ACGHSLTVGLTTSGH 525
+ SGK++T G LG+G+ + K VP L++ +K+ ACG++ + ++ G
Sbjct: 768 LESGKVYTAGYNKNGELGNGEFNLK-KKFGVPILLNICVNKIIKIACGYNYVLCVSDVGL 826
Query: 526 VFTMGSTVYGQLG 538
V+ G QLG
Sbjct: 827 VYGWGKNDKSQLG 839
Score = 76 (31.8 bits), Expect = 9.6e-09, Sum P(3) = 9.6e-09
Identities = 35/144 (24%), Positives = 63/144 (43%)
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRL-KPTCVPA--LIDYNFH--KVACGHSLTVGLTTSG 524
++ +L+ G + RLG +K + VP ++ N + + G++ ++ L+ G
Sbjct: 956 NTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDG 1015
Query: 525 HVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVE-EIACGAY-HVAVLTSRNEVYTWG 582
++ G + G GN N + C V L E + G Y HV LT N+++ G
Sbjct: 1016 FIYIFGEFIKGSNGNSN---NMSCEVIS-LYNEITNVKYMNGKYEHVFFLTYDNKLFGIG 1071
Query: 583 KGANGR-LGHGDVEDR--KTPALV 603
N + L + E+ K P L+
Sbjct: 1072 NNKNCQILCDNEKENNYIKKPKLI 1095
Score = 75 (31.5 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQP 326
+ I+CG H + G +++WG + G +G+G +++ +P
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEP 392
Score = 74 (31.1 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 26/114 (22%), Positives = 48/114 (42%)
Query: 524 GHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAG--ESVEEIACGAYHVAVLTSRNEVYTW 581
G ++ G+ G++G D C++ + + + + G H LT+ NE+Y
Sbjct: 905 GDLYIWGNAESGKVGL-GVDYTQGCILLPRKINIINKIYKCSLGNSHSLFLTNTNELYVC 963
Query: 582 GKGANGRLGHGDVEDR-----KTPALVEALKDRHVKYIACGSNYSAAICLHKWV 630
G NGRLG + P V + ++K I G+ YS + + ++
Sbjct: 964 GSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFI 1017
Score = 72 (30.4 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 288 IACGVRHAALVT---RQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCG 343
I+ G+ H A V + +FTWG S +LG G+ V P ++ V + C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 344 EFHTCAVTMAG------ELYTWGDGTHNAGLLGH 371
+ T + +Y++G G N GLLG+
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKG--NNGLLGY 113
Score = 69 (29.3 bits), Expect = 5.3e-07, Sum P(4) = 5.3e-07
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 402 TALITSTGQLFTFGDGTFGVLGHGD---RKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
+ + +G+++T G G LG+G+ +K P + ++ + I +ACG + V
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILL-NICVNKIIKIACGYNYVLCVS 822
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
+V G ++ WG DK++LG G
Sbjct: 823 DV-----------GLVYGWGKNDKSQLGIG 841
Score = 42 (19.8 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 713 NKDRLDKSDLKLSKSAMPSNVDLIKQLD 740
+K RL +D+ KS +P N+ I D
Sbjct: 1745 DKKRLFVNDISCYKSGVPYNIPNINMED 1772
Score = 39 (18.8 bits), Expect = 2.3e-12, Sum P(4) = 2.3e-12
Identities = 12/43 (27%), Positives = 14/43 (32%)
Query: 692 KLNKVSEASNRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVD 734
KLNK N + N D DK L K + D
Sbjct: 1703 KLNKKKNVKREPNISSFIDNLNDDEKDKEFLNFIKGKTQNESD 1745
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 166 (63.5 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 41/163 (25%), Positives = 79/163 (48%)
Query: 278 ESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV 337
+ NVV+ H + G +H+ G++++WG GRLG G K +P L++ L +
Sbjct: 437 KKNVVI---HCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRI 493
Query: 338 DFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD-VSHWIPKRISGPLEGLQVASVT 396
+V G H+ + +YTWG+G LGHG D + + PK + +V ++
Sbjct: 494 LYVCAGTSHSGCIDSNYNVYTWGNGKFYK--LGHGNDDIDIYYPKLVECLNHNKKVCMLS 551
Query: 397 CGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVS-YPREVES 438
G +++ + G ++ +G TF + + +S P+++ +
Sbjct: 552 FGCFNSLALNVKGDVYVWG--TFNITNNYVNYYISKLPKQINT 592
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHV 526
A + G L++WG + +G+G + +PT P ++ HS+ +G
Sbjct: 363 AICTGGVLYSWGYNNFGCIGNGTNQNVYEPT--PIFLE--------PHSVD----NNGD- 407
Query: 527 FTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIA--C--GAYHVAVLTSRNEVYTWG 582
Y N N+ K ED + + + + C G+ H ++Y+WG
Sbjct: 408 --NNDDDYDDDNNNNSTYKFH-KKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIYSWG 464
Query: 583 KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
G NGRLG G+++ P L++ L+++ + Y+ G+++S I
Sbjct: 465 YGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCI 506
Score = 128 (50.1 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 46/183 (25%), Positives = 83/183 (45%)
Query: 236 CDALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHA 295
C+ GD+Y WG + + G K+ N + ++ + L + +L ++ G H+
Sbjct: 454 CNLHGDIYSWGYG-GNGRLGLGNIKSYN----KPQLI--KGLRNKRIL---YVCAGTSHS 503
Query: 296 ALVTRQGEVFTWGEESGGRLGHGVGK-DIVQPHLLESLTMTS-VDFVTCGEFHTCAVTMA 353
+ V+TWG +LGHG DI P L+E L V ++ G F++ A+ +
Sbjct: 504 GCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVK 563
Query: 354 GELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFT 413
G++Y WG + + +S +PK+I+ + S+ + IT G L +
Sbjct: 564 GDVYVWGTFNITNNYVNYY--ISK-LPKQIN---TNYKCISIHASTYVCFGITLVGDLIS 617
Query: 414 FGD 416
FG+
Sbjct: 618 FGN 620
Score = 121 (47.7 bits), Expect = 7.8e-09, Sum P(4) = 7.8e-09
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 472 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGS 531
G +++WG G RLG G+ + KP + L + V G S + + ++ +V+T G+
Sbjct: 458 GDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGN 517
Query: 532 TVYGQLGNPNADGKL--PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
+ +LG+ N D + P LVE + V ++ G ++ L + +VY WG
Sbjct: 518 GKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 115 (45.5 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 517 TVGLTTSGHVFTMGSTVYGQLGNPNADGK----LPCLVEDKLAGESVEEIACGAYHVAVL 572
+V L SG V+T G G+LGN + K +P L+ + + +IACG +V +
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN--ICVNKIIKIACGYNYVLCV 821
Query: 573 TSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ VY WGK +LG G ++D P V+ L + V I G ++SA I
Sbjct: 822 SDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI 871
Score = 112 (44.5 bits), Expect = 6.4e-08, Sum P(4) = 6.4e-08
Identities = 36/114 (31%), Positives = 54/114 (47%)
Query: 514 HSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHVAVL 572
HSL L G +++ G G+LG N P L++ L + + + G H +
Sbjct: 450 HSLACNL--HGDIYSWGYGGNGRLGLGNIKSYNKPQLIKG-LRNKRILYVCAGTSHSGCI 506
Query: 573 TSRNEVYTWGKGANGRLGHGDVE-DRKTPALVEALK-DRHVKYIACGSNYSAAI 624
S VYTWG G +LGHG+ + D P LVE L ++ V ++ G S A+
Sbjct: 507 DSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLAL 560
Score = 111 (44.1 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 37/145 (25%), Positives = 67/145 (46%)
Query: 392 VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGV 451
V + G H+ G ++++G G G LG G+ K+ + P+ ++ L R + V G
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGT 500
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID-YNFHKV 510
H+ + S+ +V +TWG+G +LGHG+ + + P L++ N +K
Sbjct: 501 SHSGCI------DSNYNV-----YTWGNGKFYKLGHGNDDIDIY---YPKLVECLNHNKK 546
Query: 511 ACGHSL----TVGLTTSGHVFTMGS 531
C S ++ L G V+ G+
Sbjct: 547 VCMLSFGCFNSLALNVKGDVYVWGT 571
Score = 105 (42.0 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
T + F++CG+ HT A+ G LY+WG +N G +G+GT+ + + P I
Sbjct: 349 TKIKFISCGDMHTLAICTGGVLYSWG--YNNFGCIGNGTNQNVYEPTPI 395
Score = 99 (39.9 bits), Expect = 7.8e-09, Sum P(4) = 7.8e-09
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 380 PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREV 436
P +I P + ++ ++CG HT I + G L+++G FG +G+G +NV P +
Sbjct: 339 PMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 96 (38.9 bits), Expect = 9.1e-11, Sum P(4) = 9.1e-11
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 551 EDKLAGESVEEIACGAYHVAV-LTSRNEVYTWGKGANGRLGHGDVEDRK---TPALVEAL 606
++KL +S +I G+ H +V L +VYT G NG LG+G+ +K P L+
Sbjct: 745 KNKLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNIC 804
Query: 607 KDRHVKYIACGSNYSAAICL 626
++ +K IACG NY +C+
Sbjct: 805 VNKIIK-IACGYNY--VLCV 821
Score = 80 (33.2 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 467 ASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV--PALIDY--NFHKVACGHSLTVGLTT 522
+S G L+ WG+ + ++G G + C+ P I+ +K + G+S ++ LT
Sbjct: 900 SSDECGDLYIWGNAESGKVGLGVDYTQ---GCILLPRKINIINKIYKCSLGNSHSLFLTN 956
Query: 523 SGHVFTMGSTVYGQLGNPNADGKLPC---LVEDKLAGES---VEEIACGAYHVAVLTSRN 576
+ ++ GS G+LG K+ C V K+ + +++I G + +L+
Sbjct: 957 TNELYVCGSNNNGRLGLFEKS-KMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDG 1015
Query: 577 EVYTWG---KGANG 587
+Y +G KG+NG
Sbjct: 1016 FIYIFGEFIKGSNG 1029
Score = 78 (32.5 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 469 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV---ACGHSLTVGLTTSGH 525
+ SGK++T G LG+G+ + K VP L++ +K+ ACG++ + ++ G
Sbjct: 768 LESGKVYTAGYNKNGELGNGEFNLK-KKFGVPILLNICVNKIIKIACGYNYVLCVSDVGL 826
Query: 526 VFTMGSTVYGQLG 538
V+ G QLG
Sbjct: 827 VYGWGKNDKSQLG 839
Score = 76 (31.8 bits), Expect = 9.6e-09, Sum P(3) = 9.6e-09
Identities = 35/144 (24%), Positives = 63/144 (43%)
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRL-KPTCVPA--LIDYNFH--KVACGHSLTVGLTTSG 524
++ +L+ G + RLG +K + VP ++ N + + G++ ++ L+ G
Sbjct: 956 NTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDG 1015
Query: 525 HVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVE-EIACGAY-HVAVLTSRNEVYTWG 582
++ G + G GN N + C V L E + G Y HV LT N+++ G
Sbjct: 1016 FIYIFGEFIKGSNGNSN---NMSCEVIS-LYNEITNVKYMNGKYEHVFFLTYDNKLFGIG 1071
Query: 583 KGANGR-LGHGDVEDR--KTPALV 603
N + L + E+ K P L+
Sbjct: 1072 NNKNCQILCDNEKENNYIKKPKLI 1095
Score = 75 (31.5 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQP 326
+ I+CG H + G +++WG + G +G+G +++ +P
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEP 392
Score = 74 (31.1 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 26/114 (22%), Positives = 48/114 (42%)
Query: 524 GHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAG--ESVEEIACGAYHVAVLTSRNEVYTW 581
G ++ G+ G++G D C++ + + + + G H LT+ NE+Y
Sbjct: 905 GDLYIWGNAESGKVGL-GVDYTQGCILLPRKINIINKIYKCSLGNSHSLFLTNTNELYVC 963
Query: 582 GKGANGRLGHGDVEDR-----KTPALVEALKDRHVKYIACGSNYSAAICLHKWV 630
G NGRLG + P V + ++K I G+ YS + + ++
Sbjct: 964 GSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFI 1017
Score = 72 (30.4 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 288 IACGVRHAALVT---RQGEVFTWGEESGGRLGHGVGKDIVQ-PHLLESLTMTSVDFVTCG 343
I+ G+ H A V + +FTWG S +LG G+ V P ++ V + C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 344 EFHTCAVTMAG------ELYTWGDGTHNAGLLGH 371
+ T + +Y++G G N GLLG+
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKG--NNGLLGY 113
Score = 69 (29.3 bits), Expect = 5.3e-07, Sum P(4) = 5.3e-07
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 402 TALITSTGQLFTFGDGTFGVLGHGD---RKNVSYPREVESLSGLRTIAVACGVWHTAAVV 458
+ + +G+++T G G LG+G+ +K P + ++ + I +ACG + V
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILL-NICVNKIIKIACGYNYVLCVS 822
Query: 459 EVIVTQSSASVSSGKLFTWGDGDKNRLGHG 488
+V G ++ WG DK++LG G
Sbjct: 823 DV-----------GLVYGWGKNDKSQLGIG 841
Score = 42 (19.8 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 713 NKDRLDKSDLKLSKSAMPSNVDLIKQLD 740
+K RL +D+ KS +P N+ I D
Sbjct: 1745 DKKRLFVNDISCYKSGVPYNIPNINMED 1772
Score = 39 (18.8 bits), Expect = 2.3e-12, Sum P(4) = 2.3e-12
Identities = 12/43 (27%), Positives = 14/43 (32%)
Query: 692 KLNKVSEASNRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVD 734
KLNK N + N D DK L K + D
Sbjct: 1703 KLNKKKNVKREPNISSFIDNLNDDEKDKEFLNFIKGKTQNESD 1745
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 159 (61.0 bits), Expect = 4.3e-12, Sum P(4) = 4.3e-12
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
T +V ++G + GV + +Q + + + + ++CG H A++ +Y+
Sbjct: 334 TTPTKVLSFGGSNDNNFLGGVINNELQM-MTDQMNSIKIIQISCGSNHILALSDQYHVYS 392
Query: 359 WGDGTHNAGLLGHGTDVS------HWI--PKRISGPLE-GLQVASVTCGPWHTALITSTG 409
WG H G LGHG D S WI PK+I E G+ V SV+ G H +T
Sbjct: 393 WGSAEH--GKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDS 450
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESL--SGLRTIAVACGVWHT 454
+ T+G G+ G LG G R ++ P E++ + + + + CG +++
Sbjct: 451 GILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNS 497
Score = 154 (59.3 bits), Expect = 2.6e-08, Sum P(4) = 2.6e-08
Identities = 48/175 (27%), Positives = 80/175 (45%)
Query: 253 VVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESG 312
V+ G + N+LG + L + + + I+CG H ++ Q V++WG
Sbjct: 339 VLSFGGSNDNNFLGGVINNELQMMTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEH 398
Query: 313 GRLGHG-----VGKD---IVQPHLLESLTMTSVDF--VTCGEFHTCAVTMAGELYTWGDG 362
G+LGHG V ++ I P ++SL V V+ G H A+T+ + TWG G
Sbjct: 399 GKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGKG 458
Query: 363 THNAGLLGHGTDVSHWIPKRISGPLE-GLQVASVTCGPWHTALIT-STGQLFTFG 415
+ G LG G W P I ++ ++ + CG +++ IT +L+ FG
Sbjct: 459 SD--GQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEKRELYQFG 511
Score = 145 (56.1 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 42/131 (32%), Positives = 69/131 (52%)
Query: 470 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
+S ++F WG G + GDK ++P VP L N +++CG + T+ L+ SG +++
Sbjct: 8 NSKQIFYWGRG----VNQGDKHI-IEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSW 62
Query: 530 GST-VYGQLGN---PNADGKLPCLVE----DKLAGESVEEIACGAYHVAVLTSRNEVYTW 581
GS+ GQLG+ N GK + + L+G+SV +++ G VLT + +Y W
Sbjct: 63 GSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNW 122
Query: 582 GKGANGRLGHG 592
G G+L G
Sbjct: 123 GSNIEGQLALG 133
Score = 141 (54.7 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDG 362
++F WG G G K I++P + L ++ ++CG HT ++ +G+LY+WG
Sbjct: 11 QIFYWGR--GVNQGD---KHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGS- 64
Query: 363 THNAGLLGHGTDVSHW-IPKRISG-----PLEGLQVASVTCGPWHTALITSTGQLFTFGD 416
++++G LGHG + + PK I L G V V+ G T ++T G ++ +G
Sbjct: 65 SNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGS 124
Query: 417 GTFGVLGHGDRKN 429
G L G N
Sbjct: 125 NIEGQLALGQPVN 137
Score = 137 (53.3 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 49/166 (29%), Positives = 77/166 (46%)
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
G D N LG G L+ + +++CG + + L+ HV++ GS +G+L
Sbjct: 344 GSNDNNFLG-GVINNELQ-MMTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKL 401
Query: 538 G----------NP---NADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKG 584
G NP N+ K+ L E G +V ++ G H LT + + TWGKG
Sbjct: 402 GHGEDYSFVSQNPRWINSPKKIKSLQEK---GVTVISVSSGYSHCMALTLDSGILTWGKG 458
Query: 585 ANGRLGHGDVEDRKTPALVEALKDRHVKY--IACGSNYSAAICLHK 628
++G+LG G D +P ++ + D++ K I CG S I L K
Sbjct: 459 SDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEK 504
Score = 124 (48.7 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 47/201 (23%), Positives = 98/201 (48%)
Query: 326 PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG 385
P+LL S + +S T E T ++ ++G G+++ LG G +++ + + ++
Sbjct: 311 PNLLSSSSSSS-SAATNNELKFKQTTPT-KVLSFG-GSNDNNFLG-GV-INNEL-QMMTD 364
Query: 386 PLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGD-----RKN---VSYPREVE 437
+ +++ ++CG H ++ ++++G G LGHG+ +N ++ P++++
Sbjct: 365 QMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIK 424
Query: 438 SLS--GLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK 495
SL G+ I+V+ G H A+ ++ SG + TWG G +LG G +
Sbjct: 425 SLQEKGVTVISVSSGYSHCMAL----------TLDSG-ILTWGKGSDGQLGTGFRHDIWS 473
Query: 496 PTCVPALIDYN--FHKVACGH 514
P + +ID N ++ CG+
Sbjct: 474 PFEIKRVIDKNEKIVQICCGY 494
Score = 124 (48.7 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASV 469
Q+F +G G + GD K++ P EV L+ + ++CG HT + +
Sbjct: 11 QIFYWGRG----VNQGD-KHIIEPIEVPELNKKNIVQLSCGSTHTLVLSD---------- 55
Query: 470 SSGKLFTWGDGDKN-RLGHGDKEPRL-KP------TCVPALIDYNFHKVACGHSLTVGLT 521
SG L++WG + + +LGHGD + + KP + + AL + +V+ G T LT
Sbjct: 56 -SGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLT 114
Query: 522 TSGHVFTMGSTVYGQL--GNP 540
G ++ GS + GQL G P
Sbjct: 115 DQGSIYNWGSNIEGQLALGQP 135
Score = 115 (45.5 bits), Expect = 5.3e-10, Sum P(4) = 5.3e-10
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 284 DVHHIACGVRHAALVTRQGEVFTWGEE-SGGRLGHG-----VGK--DIVQPHLLESLTMT 335
++ ++CG H +++ G++++WG S G+LGHG GK +I + L+++L+
Sbjct: 39 NIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGD 98
Query: 336 SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG 370
SV V+ G T +T G +Y WG LG
Sbjct: 99 SVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 101 (40.6 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLG----HG--DRKN-VSYPREVESLSGLR 443
++ ++ G HT ++ G+ + G G FG LG H D+ + V+YP + +L
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYF 624
Query: 444 TIAVACGVWHTAAVV 458
+V CG WH+ A+V
Sbjct: 625 VESVQCGRWHSVAIV 639
Score = 78 (32.5 bits), Expect = 4.3e-12, Sum P(4) = 4.3e-12
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP------NADG--KLPCLVEDKLAGESVE 560
+++ G+S T+ L +G ++G +GQLG P + D P ++ L VE
Sbjct: 568 QISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIP-ALLPYFVE 626
Query: 561 EIACGAYH-VAVLTSRN 576
+ CG +H VA++++RN
Sbjct: 627 SVQCGRWHSVAIVSNRN 643
Score = 75 (31.5 bits), Expect = 8.6e-12, Sum P(4) = 8.6e-12
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 559 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLG----HGDVE-DR--KTPALVEALKDRHV 611
+++I+ G H +L E + G+G G+LG H ++ D P ++ AL V
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFV 625
Query: 612 KYIACGSNYSAAI 624
+ + CG +S AI
Sbjct: 626 ESVQCGRWHSVAI 638
Score = 72 (30.4 bits), Expect = 4.3e-12, Sum P(4) = 4.3e-12
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVL---LPRPLESNVVLDVHHIACGVRHAA 296
GD+Y WG + G KN Y G ++ L + L + V+ V + G+
Sbjct: 57 GDLYSWGSSNSSGQLGHGDSKN-QY-GKPKNIKKFSLIKALSGDSVIQV---STGLDFTF 111
Query: 297 LVTRQGEVFTWGEESGGRLGHG 318
++T QG ++ WG G+L G
Sbjct: 112 VLTDQGSIYNWGSNIEGQLALG 133
Score = 66 (28.3 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 471 SGKLFTWGDGDKNRLG----HG--DKEPRLK-PTCVPALIDYNFHKVACG--HSLTV 518
+G+ + G G+ +LG H DK+ + PT +PAL+ Y V CG HS+ +
Sbjct: 582 NGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFVESVQCGRWHSVAI 638
Score = 42 (19.8 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 820 SFSKSITDSLKKTNELLNQEVLKLRAQVESLRQ 852
S S S T SL N +LNQ L ES +
Sbjct: 846 SQSLSTTTSLPSNNPILNQIELSSDGSEESTEE 878
Score = 40 (19.1 bits), Expect = 6.8e-12, Sum P(4) = 6.8e-12
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 595 EDRKTPALVEALKDRHVKYIACGSNYSAAI-CL 626
E +T L+ AL + Y+ G +Y AA+ CL
Sbjct: 1003 EQLRTTLLLFALYTPQIGYVQ-GMSYLAAVFCL 1034
Score = 39 (18.8 bits), Expect = 7.9e-09, Sum P(4) = 7.9e-09
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 179 SSPTSFQTEGSISVNSERSHVASDNTNMQVK 209
+S TS + S S RS++ N Q K
Sbjct: 189 ASSTSLLIDSLTSTYSTRSYITLSNEQQQQK 219
Score = 37 (18.1 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 710 SGENKDRLDKSDLKLSKSAMPSNVDLIKQL 739
+ EN+D+ D D + N + IKQ+
Sbjct: 540 NNENEDKKDDDDDNDDEDENNDNSNRIKQI 569
Score = 37 (18.1 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 171 SVSLNHPISSPTSFQTE--GSISVNSERSHVASDNTN 205
+++ + P SS ++F E GS + N+ + ++N N
Sbjct: 238 TITSSSPFSSVSNFIKEMVGSNNNNNNNENDENNNNN 274
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 179 (68.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 61/197 (30%), Positives = 92/197 (46%)
Query: 404 LITSTGQLFTFGDGTFGVLG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
++T GQ+ + G +FG LG HG R+ V P+ +E L + + +A G+ H AV
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRH--AV---- 52
Query: 462 VTQSSASVSSGKLFTWGDGDKN---RLGHGDKEPRL----KPTCVPALIDYNFHKVACGH 514
A+ +SG +F WG G + RL G P +P+ V L + V G
Sbjct: 53 -----AATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 107
Query: 515 SLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLT 573
+ LT +G V+ GS +GQL N A +P +E E V I G H+ T
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQT 167
Query: 574 SRNEVYTWGKGANGRLG 590
+++TWG+ G+LG
Sbjct: 168 ETGKMFTWGRADYGQLG 184
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 56/199 (28%), Positives = 92/199 (46%)
Query: 297 LVTRQGEVFTWGEESGGRLG--HGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAG 354
++T G+V + G S G+LG HG + +V P +E L V + G H A T +G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 355 ELYTWGDGTHNAGL-LGHGTDVSHWI----PKRISGPLEGLQVASVTCGPWHTALITSTG 409
++ WG G + G L G + + P R++G LE + V G H+A +T G
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDAG 117
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVES--LSGLRTIAVACGVWHTAAVVEVIVTQSSA 467
+++ +G G L + + + P+++E+ + A+ G H A E
Sbjct: 118 EVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE-------- 168
Query: 468 SVSSGKLFTWGDGDKNRLG 486
+GK+FTWG D +LG
Sbjct: 169 ---TGKMFTWGRADYGQLG 184
Score = 156 (60.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 45/144 (31%), Positives = 66/144 (45%)
Query: 288 IACGVRHAALVTRQGEVFTWGE---ESGGRLGHGVGKDIV----QPHLLESLTMTSVDFV 340
IA G+RHA T G VF WG G RL G + +P + L + V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 341 TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGP 399
G H+ ++T AGE+Y WG H G L + +P++I + +V ++ G
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKH--GQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGW 160
Query: 400 WHTALITSTGQLFTFGDGTFGVLG 423
H T TG++FT+G +G LG
Sbjct: 161 THLVAQTETGKMFTWGRADYGQLG 184
Score = 115 (45.5 bits), Expect = 0.00093, P = 0.00093
Identities = 37/114 (32%), Positives = 53/114 (46%)
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED--KLAGESVEEIACGAYHVAVLTSRNE 577
LT +G V + GS +GQLG P+ G C+V +L E V IA G H T+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPH--GPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGI 59
Query: 578 VYTWGKG---ANGRLGHGDVED----RKTPALVEALKDRHVKYIACGSNYSAAI 624
V+ WG G RL G K P+ V L++ + GS++SA++
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 113
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 156 (60.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 68/301 (22%), Positives = 124/301 (41%)
Query: 340 VTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGP 399
V G+ + A+T G++Y WG N G+LG ++ L+ ++ + CG
Sbjct: 236 VAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLK--KIKHLVCGD 293
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHG--DRKNVS--YPREVESLSGLRTIAVACGVWHTA 455
H + G + ++G G LG +R ++ PRE G+ + + G +H+
Sbjct: 294 NHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGI--VHIGAGAFHSF 351
Query: 456 AVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL-KPTCVPALIDYNFHKVACGH 514
AV S V + L ++G+ R GD E + PT V +L N ++ G
Sbjct: 352 AV------HQSGKVFAWGLNSFGETGI-RENAGDSEAAIVHPTVVDSLSKKNVTQICGGA 404
Query: 515 SLTVGLTTSGHVFTMGSTVYGQLGN-----PN----ADGK-LP-CLVEDK-LAGESVEEI 562
++ T G G Q G P+ D + P L+E + G + +
Sbjct: 405 HHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKAKAV 464
Query: 563 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE--ALKDRHVKYIACGSNY 620
A G+ H + + ++WG A + G G +D + ++E A++ + + + G +
Sbjct: 465 AAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIENTAVRGKSLNWAGGGGQF 524
Query: 621 S 621
S
Sbjct: 525 S 525
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 89/344 (25%), Positives = 140/344 (40%)
Query: 127 QGGRSKIDGWNDGGLYLEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISSPTSFQT 186
QG + W +GG D+RD S+S SDS +P+++ P + P+S
Sbjct: 177 QGALGRDTTW-EGGYKDMDNRDSDSDSDSDSD-------DNPDLNPHECTPTAIPSSAFP 228
Query: 187 EGSISVN---SERSHVASDNTNMQVKGSGSDVFRVXXXXXXXXXXXXXAPDDCDALGDVY 243
G++ V + S A + QV G G+ FR L D+
Sbjct: 229 HGTVIVEVAAGDSSSFALTDEG-QVYGWGT--FR-SNDGILGFDAKTKVQTTPKLLPDLK 284
Query: 244 IWGEVIC-DNVVKAGADKNV---------NYLGTRA---DVLLP-RPLESNVVLDVHHIA 289
++C DN V A DK N LG R + L +P E + + HI
Sbjct: 285 KIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIVHIG 344
Query: 290 CGVRHAALVTRQGEVFTWGEESGGRLG--HGVGKD---IVQPHLLESLTMTSVDFVTCGE 344
G H+ V + G+VF WG S G G G IV P +++SL+ +V + G
Sbjct: 345 AGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGA 404
Query: 345 FHTCAVTMAGELYTWG--DGTHNAGL----LGHGTDVSHWI--PKRISGP--LEGLQVAS 394
H+ A T GE WG DG + GL L + P+ + P + G++ +
Sbjct: 405 HHSIAATQDGECLVWGRLDG-YQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKAKA 463
Query: 395 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
V G H+ I ++G+ +++G G G + +V +E+
Sbjct: 464 VAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIEN 507
Score = 129 (50.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 66/262 (25%), Positives = 107/262 (40%)
Query: 389 GLQVASVTCGPWHTALITSTGQLFTFGDGTF----GVLGHGDRKNV-SYPREVESLSGLR 443
G + V G + +T GQ++ G GTF G+LG + V + P+ + L ++
Sbjct: 230 GTVIVEVAAGDSSSFALTDEGQVY--GWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIK 287
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI 503
+ CG H A+ + G + +WG G +N+LG E P
Sbjct: 288 HLV--CGDNHVLALND-----------KGAVLSWGSGQQNQLGRRIIERNKLNGLQPR-- 332
Query: 504 DYNFHK----VACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVE----DKL 554
++ K + G + + SG VF G +G+ G NA +V D L
Sbjct: 333 EFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSL 392
Query: 555 AGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG------HGDV---EDRKTPA-LVE 604
+ ++V +I GA+H T E WG+ + G D ++R P L+E
Sbjct: 393 SKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIE 452
Query: 605 --ALKDRHVKYIACGSNYSAAI 624
A+ K +A GS++S AI
Sbjct: 453 PTAVPGIKAKAVAAGSDHSIAI 474
Score = 124 (48.7 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 45/158 (28%), Positives = 64/158 (40%)
Query: 479 DGDKNRLGHGDKEPRLKP-TCVPALIDYN-F-H-----KVACGHSLTVGLTTSGHVFTMG 530
D D + D P L P C P I + F H +VA G S + LT G V+ G
Sbjct: 197 DSDSDSDSDSDDNPDLNPHECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWG 256
Query: 531 STVYGQLGNPNADGKLPCLVEDKLAGE--SVEEIACGAYHVAVLTSRNEVYTWGKGANGR 588
T G D K KL + ++ + CG HV L + V +WG G +
Sbjct: 257 -TFRSNDGILGFDAKTKVQTTPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQ 315
Query: 589 LGHGDVEDRKTPALV--EALKDRHVKYIACGSNYSAAI 624
LG +E K L E + + +I G+ +S A+
Sbjct: 316 LGRRIIERNKLNGLQPREFGLPKGIVHIGAGAFHSFAV 353
Score = 96 (38.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 29/82 (35%), Positives = 39/82 (47%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQ-------PHLLESLTMTSVDFVTCGEFHTCAVT 351
T + V+ GE S G LG GVGK+++ PHLL V V G H A+T
Sbjct: 107 TAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPD--DVGVVQVAVGGMHCVALT 164
Query: 352 MAGELYTWGDGTHNAGLLGHGT 373
++ TWG ++ G LG T
Sbjct: 165 HDNKVLTWG--VNDQGALGRDT 184
Score = 75 (31.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 24/76 (31%), Positives = 33/76 (43%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
+VY+ GE + G KNV + + L P L +V V +A G H +T
Sbjct: 111 NVYVCGEG-SSGELGLGVGKNV--IDVKRPRLNPHLLPDDV--GVVQVAVGGMHCVALTH 165
Query: 301 QGEVFTWGEESGGRLG 316
+V TWG G LG
Sbjct: 166 DNKVLTWGVNDQGALG 181
Score = 58 (25.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL--EGLQVASVTCGPWHTALIT 406
A T +Y G+G+ LG G +V R++ L + + V V G H +T
Sbjct: 105 APTAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALT 164
Query: 407 STGQLFTFGDGTFGVLG 423
++ T+G G LG
Sbjct: 165 HDNKVLTWGVNDQGALG 181
Score = 58 (25.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 25/86 (29%), Positives = 35/86 (40%)
Query: 406 TSTGQLFTFGDGTFGVLGHGDRKNV---SYPREVESL--SGLRTIAVACGVWHTAAVVEV 460
T+ ++ G+G+ G LG G KNV PR L + + VA G H A+
Sbjct: 107 TAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTH- 165
Query: 461 IVTQSSASVSSGKLFTWGDGDKNRLG 486
K+ TWG D+ LG
Sbjct: 166 ----------DNKVLTWGVNDQGALG 181
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 207 (77.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 79/271 (29%), Positives = 124/271 (45%)
Query: 368 LLGHGTDVSHWIPKRISGPLEGLQVASVTCG--PWHTALI-TSTGQLFTFGDGTFGVLGH 424
LL HG VS +I + EGL + P H T +++T+G+ LGH
Sbjct: 108 LLKHG--VSLYIQDK-----EGLSALDLVMKDRPIHVVFKKTDLTEVYTWGNNINFTLGH 160
Query: 425 GDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ-SSASVS-SGKLFTWGDGDK 482
G +++ +P V+ ++ + +V++ + S +S G+++T G G
Sbjct: 161 GGQQSKHHPELVDLFPR-----------NSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQG 209
Query: 483 NRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG--NP 540
RLGHGD++ L P V L + ++A TV LT G V+T G + QLG P
Sbjct: 210 GRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLGILPP 269
Query: 541 NADGKLPCLVEDK-LAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG-DVEDRK 598
A+ +P V+ K L G V +A G +H VL ++ VYT G G+LG+ D K
Sbjct: 270 PANCSVPRQVQAKNLKGRMVIGVAAGRFHT-VLWTKEAVYTMGLNG-GQLGYLLDPNGEK 327
Query: 599 ---TPALVEALKDRHVKYIACGSNYSAAICL 626
P V AL + V ++ A +C+
Sbjct: 328 CVTAPRQVSALHHKDVSVSLVSASDGATVCV 358
Score = 197 (74.4 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 62/206 (30%), Positives = 96/206 (46%)
Query: 239 LGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALV 298
L +VY WG I N + + D L PR N V + C H+ +
Sbjct: 144 LTEVYTWGNNI--NFTLGHGGQQSKHHPELVD-LFPR----NSVYIKQVVLCKF-HSVFL 195
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+ +G+++T G GGRLGHG + + P L+E L+ + + HT +T G +YT
Sbjct: 196 SHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYT 255
Query: 359 WGDGT-HNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGPWHTALITSTGQLFTFG- 415
+G T H G+L + S +P+++ L+G V V G +HT L T ++T G
Sbjct: 256 FGLNTFHQLGILPPPANCS--VPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYTMGL 312
Query: 416 -DGTFG-VLGHGDRKNVSYPREVESL 439
G G +L K V+ PR+V +L
Sbjct: 313 NGGQLGYLLDPNGEKCVTAPRQVSAL 338
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 198 (74.8 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 94/373 (25%), Positives = 160/373 (42%)
Query: 287 HIACG--VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIV---QPHLLESLTMTSVDFVT 341
++A G H L+ + +G G+LG + +DI +P ++ +L ++
Sbjct: 118 YVASGPSAAHTILINMDRKALGFGRNPSGQLG--LSQDIKLAEKPTIIPALEQLNIVQAA 175
Query: 342 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHG-TDVSHWIPKRISGPLEGLQVASVTCGPW 400
G HT +T G +Y G+ + +G G G T + + P I+ G + + CG
Sbjct: 176 VGRHHTLFLTDTGTVYACGE--NKSGQCGVGNTHANIYSPTPIN--YRGPPIIRIGCGAE 231
Query: 401 HTALITSTGQLFTFGDGTFGVLGHG-DRK------NVSY-----PREV----ES------ 438
+ ++ G L TFG +G LGH D K +S+ P++V E
Sbjct: 232 FSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHV 291
Query: 439 --LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKP 496
+ G++ + ACG HT A+ S ++++WG G RLGH EP K
Sbjct: 292 TPVDGVQIVDFACGNNHTVAID-----------SKKRVYSWGFGGFGRLGHA--EP--KD 336
Query: 497 TCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST-VYGQLGNPNADGKLPCLVEDKLA 555
VP L+ + + G S+ G T S V +G ++GQ P V+D L+
Sbjct: 337 EMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQD-LS 395
Query: 556 GESVEEIACGAYHVAVLTSRNEVYTWGKGAN-GRLGHGDVEDRKT-PALVEALKDRHVKY 613
G ++ +I C + ++++ + + WG G LG G+ + T P V L + +
Sbjct: 396 GWNITDIGCANTSI-MISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQ 454
Query: 614 IACGSNYSAAICL 626
+ G YS + L
Sbjct: 455 VTMG--YSHTVLL 465
Score = 159 (61.0 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 50/188 (26%), Positives = 83/188 (44%)
Query: 276 PLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMT 335
P++ ++D ACG H + + V++WG GRLGH KD + P L++
Sbjct: 293 PVDGVQIVD---FACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQ 349
Query: 336 SVD--FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 393
V CG + V G L+ +G T ++ PK + L G +
Sbjct: 350 GRGGRSVFCGSTFSLIVNELGLLFLFGQNKK--------TGEANMYPKPVQD-LSGWNIT 400
Query: 394 SVTCGPWHTALITSTGQLFTFGDG-TFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGV 451
+ C + +I++ L +G TFG LG G+ +K+ + P+EV L ++ V G
Sbjct: 401 DIGCANT-SIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGY 459
Query: 452 WHTAAVVE 459
HT +V+
Sbjct: 460 SHTVLLVD 467
Score = 139 (54.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 50/188 (26%), Positives = 78/188 (41%)
Query: 409 GQLFTFGDGTFGVLGHGDRKNVSYPR----EVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
GQ+ G T+ + G DRKNV+ R + + VA G +A +++
Sbjct: 77 GQMLIAGMVTWDLTGKRDRKNVTKVRPNLYSFHRFTEEKYRYVASG---PSAAHTILINM 133
Query: 465 SSASVSSGKLFTWGDGDKNRLGHG-DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTS 523
++ G+ +LG D + KPT +PAL N + A G T+ LT +
Sbjct: 134 DRKALGFGR------NPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDT 187
Query: 524 GHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGK 583
G V+ G GQ G N + G + I CGA +L + ++T+G
Sbjct: 188 GTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGL 247
Query: 584 GANGRLGH 591
G+LGH
Sbjct: 248 PEYGQLGH 255
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 81/342 (23%), Positives = 138/342 (40%)
Query: 306 TWGEESGGRLGHGVGKDIVQPHL--LESLTMTSVDFVTCGEF--HTCAVTMAGELYTWGD 361
TW + +G R V K V+P+L T +V G HT + M + G
Sbjct: 86 TW-DLTGKRDRKNVTK--VRPNLYSFHRFTEEKYRYVASGPSAAHTILINM--DRKALGF 140
Query: 362 GTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGV 421
G + +G LG D+ I LE L + G HT +T TG ++ G+ G
Sbjct: 141 GRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQ 200
Query: 422 LGHGD-RKNVSYPREVESLSGLRTIAVACGV-----------WHTAAVVEVIV----TQS 465
G G+ N+ P + + G I + CG HT + E T +
Sbjct: 201 CGVGNTHANIYSPTPI-NYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDA 259
Query: 466 SASVSSGKL-FTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSG 524
V++ KL F + K + + +K T V + +F ACG++ TV + +
Sbjct: 260 KYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDF---ACGNNHTVAIDSKK 316
Query: 525 HVFTMGSTVYGQLGNPNA-DGKLPCLVED-KLAGESVEEIACGAYHVAVLTSRNEVYTWG 582
V++ G +G+LG+ D +P L++ G + CG+ ++ ++ +G
Sbjct: 317 RVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFG 376
Query: 583 KGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAAI 624
+ N + G ++ P V+ L ++ I C +N S I
Sbjct: 377 Q--NKKTGEANMY----PKPVQDLSGWNITDIGC-ANTSIMI 411
Score = 47 (21.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 585 ANGRLGHGDVEDRKTPALVEALKDRHVKYI--------ACGSNYSAAICLHKWVSS 632
AN H + +K +E K+ HV + ACG+N++ AI K V S
Sbjct: 265 ANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYS 320
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 176 (67.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 71/264 (26%), Positives = 115/264 (43%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC--GEFHTCA 349
V H + T G V T G+ G+LG +G+++++ +L D V G HT
Sbjct: 25 VSHRSHSTEPGLVLTLGQGDVGQLG--LGENVME-RKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 82 LSKSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTD 136
Query: 408 TGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
G++F +G GV+G + K P +V+ + + VA G H +
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLY 194
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI-----DYNFHKVACGHSLTVG 519
+ G+L + NR G E L P CV F CG T
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 520 LTTSGHVFTMGSTVYGQLGNPNAD 543
++ GHV+ G + Y QLG P +
Sbjct: 255 ISHEGHVYGFGLSNYHQLGTPGTE 278
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 47/168 (27%), Positives = 81/168 (48%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG +V+ +P ++ DV G H +++ G+V+++G G LG
Sbjct: 44 DVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG 423
+P ++ + ++VAS G H ++T+ G L+T G G G LG
Sbjct: 161 KSMVPVQVQLDVPVVKVAS---GNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 73/264 (27%), Positives = 107/264 (40%)
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGLQVASVTCGPWHTAL 404
H T G + T G G + G LG G +V P +S P + +Q + G HT
Sbjct: 27 HRSHSTEPGLVLTLGQG--DVGQLGLGENVMERKKPALVSIPEDVVQAEA---GGMHTVC 81
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVS--YPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
++ +GQ+++FG G LG S P +VE + + V+ G HTAA+ +
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSAGDSHTAALTD--- 136
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTT 522
V F +G L K + P V +D KVA G+ V LT
Sbjct: 137 ---DGRVFLWGSFRDNNGVIGLLEPMKKS--MVP--VQVQLDVPVVKVASGNDHLVMLTA 189
Query: 523 SGHVFTMGSTVYGQLGN-P----NADGK-------LPCLVEDKLAGES----VEEIACGA 566
G ++T+G GQLG P N G+ +P V K G ++ CGA
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 567 YHVAVLTSRNEVYTWGKGANGRLG 590
Y ++ VY +G +LG
Sbjct: 250 YFTFAISHEGHVYGFGLSNYHQLG 273
Score = 129 (50.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 60/219 (27%), Positives = 94/219 (42%)
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
I KR S P + + S H + T G + T G G G LG G+ NV ++
Sbjct: 6 IAKRRSPPADAIP-KSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGE--NVMERKKPAL 62
Query: 439 LSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
+S + A G HT + + SG+++++G D+ LG +
Sbjct: 63 VSIPEDVVQAEAGGMHTVCLSK-----------SGQVYSFGCNDEGALGRDTSVEGSE-- 109
Query: 498 CVPALIDYNFH--KVACGHSLTVGLTTSGHVFTMGS--TVYGQLG--NPNADGKLPCLVE 551
VP ++ +V+ G S T LT G VF GS G +G P +P V+
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+ V ++A G H+ +LT+ ++YT G G G+LG
Sbjct: 170 LDVP---VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 176 (67.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 66/245 (26%), Positives = 101/245 (41%)
Query: 288 IACGVRHAALVTRQGEVFTWGE---ESGGRLGHGVGKDIV----QPHLLESLTMTSVDFV 340
IA G+RHA T G VF WG G RL G + +P + L + V
Sbjct: 22 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 81
Query: 341 TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGP 399
G H+ ++T AGE+Y WG H G L + +P++I + +V ++ G
Sbjct: 82 LAGSDHSASLTDAGEVYVWGSNKH--GQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGW 138
Query: 400 WHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES--LSGLRTIAVACGVWH--TA 455
H T TG++FT+G +G LG + E + L R H T
Sbjct: 139 THLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG 198
Query: 456 AVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACG-- 513
A ++ + ++ G ++WG + G G + P V AL+ + V CG
Sbjct: 199 ATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAG 258
Query: 514 HSLTV 518
HSL +
Sbjct: 259 HSLAL 263
Score = 146 (56.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 49/190 (25%), Positives = 81/190 (42%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS--VDFVTCGEF 345
+ G H+A +T GEV+ WG G+L + + P +E+ + V + G
Sbjct: 81 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF-LPVPQKIEAHCFQNEKVTAIWSGWT 139
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDVSH-W-IPKR-----ISGPLEGLQ------- 391
H A T G+++TWG + G LG + W + K+ S P +
Sbjct: 140 HLVAQTETGKMFTWGRADY--GQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLT 197
Query: 392 -VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
V+CG H I G +++G G+ G G NV P+ V++L + V CG
Sbjct: 198 GATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 256
Query: 451 VWHTAAVVEV 460
H+ A+ ++
Sbjct: 257 AGHSLALCQL 266
Score = 133 (51.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 50/184 (27%), Positives = 81/184 (44%)
Query: 237 DALGDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLD--VHHIACGVRH 294
DA G+VY+WG ++K+ A + +P+ +E++ + V I G H
Sbjct: 93 DA-GEVYVWG-----------SNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 140
Query: 295 AALVTRQGEVFTWGEESGGRLGHGV----GKDIVQ----------PHLLESLT--MTSVD 338
T G++FTWG G+LG + G + + P+ + S +T
Sbjct: 141 LVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGAT 200
Query: 339 FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCG 398
V+CG H A+ + G Y+WG H G+ G GT+ + W PK + L + V CG
Sbjct: 201 EVSCGSEHNLAI-IGGVCYSWGWNEH--GMCGDGTEANVWAPKPVQALLSSSGLL-VGCG 256
Query: 399 PWHT 402
H+
Sbjct: 257 AGHS 260
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 58/259 (22%), Positives = 96/259 (37%)
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGV---LGHGDRKNVSY----PREVESLSGLR 443
+V + G H T++G +F +G G L G + + P V L +
Sbjct: 18 KVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSK 77
Query: 444 TIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKE-PRLKPTCVPAL 502
+ V G H+A++ + +G+++ WG +L + P +
Sbjct: 78 AMCVLAGSDHSASLTD-----------AGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCF 126
Query: 503 IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP----------NADGKLPCLVED 552
+ + G + V T +G +FT G YGQLG D LPC
Sbjct: 127 QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPP 186
Query: 553 KLAGES------VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
S E++CG+ H + Y+WG +G G G + P V+AL
Sbjct: 187 NSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQAL 245
Query: 607 KDRHVKYIACGSNYSAAIC 625
+ CG+ +S A+C
Sbjct: 246 LSSSGLLVGCGAGHSLALC 264
Score = 37 (18.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 143 LEDSRDLTSNSASDSSVSLT 162
LE+S+ + + SD S SLT
Sbjct: 73 LENSKAMCVLAGSDHSASLT 92
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 172 (65.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 78/337 (23%), Positives = 140/337 (41%)
Query: 291 GVRHAALVTRQGEV--FTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
G + + TRQG++ + W S R + +Q H L +T V ++ H
Sbjct: 140 GKARSLVATRQGQLHEYYWERISNTR------SEFIQ-HRHYELNVTIVQLLSDYR-HAF 191
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG---P--LE-GLQVASVTCGPWHT 402
+T G +Y WG +G LG G P + P LE G ++ + +
Sbjct: 192 ILTEEGGIYGWGFNI--SGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYL 249
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA-VVEVI 461
T+ G ++ +G G LG D ++ +P E+ S WH +++V+
Sbjct: 250 VARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVEL-SWDFFPE-------WHPDDYIIQVV 301
Query: 462 V--TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP-----ALIDYNFH--KVAC 512
V + A G ++ WG +LG D++ R +P +P L++ N ++
Sbjct: 302 VGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIA 361
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED-----KLAGESVEEIACGAY 567
G + ++ T G ++ G+ G+P L E+ + G+ + E+ G
Sbjct: 362 GGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPD 421
Query: 568 HVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
H T + +Y WG+ G+LG GD ++ PAL++
Sbjct: 422 HTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLD 458
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 172 (65.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 78/337 (23%), Positives = 140/337 (41%)
Query: 291 GVRHAALVTRQGEV--FTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
G + + TRQG++ + W S R + +Q H L +T V ++ H
Sbjct: 140 GKARSLVATRQGQLHEYYWERISNTR------SEFIQ-HRHYELNVTIVQLLSDYR-HAF 191
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISG---P--LE-GLQVASVTCGPWHT 402
+T G +Y WG +G LG G P + P LE G ++ + +
Sbjct: 192 ILTEEGGIYGWGFNI--SGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYL 249
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAA-VVEVI 461
T+ G ++ +G G LG D ++ +P E+ S WH +++V+
Sbjct: 250 VARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVEL-SWDFFPE-------WHPDDYIIQVV 301
Query: 462 V--TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVP-----ALIDYNFH--KVAC 512
V + A G ++ WG +LG D++ R +P +P L++ N ++
Sbjct: 302 VGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIA 361
Query: 513 GHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED-----KLAGESVEEIACGAY 567
G + ++ T G ++ G+ G+P L E+ + G+ + E+ G
Sbjct: 362 GGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPD 421
Query: 568 HVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVE 604
H T + +Y WG+ G+LG GD ++ PAL++
Sbjct: 422 HTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLD 458
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 192 (72.6 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 62/241 (25%), Positives = 114/241 (47%)
Query: 391 QVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACG 450
++ ++ G H++ IT G L+TFGDG G LGHG+ ++ S P+ VE ++ V
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVV-S 247
Query: 451 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
+ + S A GK+++WG D +LG G+ + +P LI++N
Sbjct: 248 IANGGK-------HSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYS-LPQLINFN---- 295
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLP--CLVEDKLAGES---VEEIACG 565
+ + + ST N N DG L ++ + + + +++CG
Sbjct: 296 -------ISYNNNNNNNNNNST--NNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCG 346
Query: 566 AYHVAVLTSRNEVYTWGKGANGRLGHGDVE--DRKTPALVEALKDRHVKYIACGSNYSAA 623
AV+T + ++T+G+G +GRLG G+ + TP LV++L+ + ++ G +S
Sbjct: 347 TNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLV 406
Query: 624 I 624
+
Sbjct: 407 L 407
Score = 188 (71.2 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 83/346 (23%), Positives = 145/346 (41%)
Query: 283 LDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC 342
L V IA G +H+ +T G+V++WG +LG G G + L L ++ +
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSY-YSLPQLINFNISYNNN 301
Query: 343 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 402
+ T + +N G + + S +++ ++CG +
Sbjct: 302 NNNNNNNSTN-------NNNNNN----NDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRS 350
Query: 403 ALITSTGQLFTFGDGTFGVLGHGDRKNV--SYPREVESLSGLRTIAVACGVWHTAAVVEV 460
A+IT G LFTFG G G LG G++ + S P+ V+SL G I ++ G H+ +
Sbjct: 351 AVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNK 410
Query: 461 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID-YNFHKVACGHSLTVG 519
+ S G+L G G + K+ + T N KV+ G ++
Sbjct: 411 GLVFSFGRNDQGQL---GIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIA 467
Query: 520 LTTSGHVFTMGSTVYGQLGNP---NADGKLPCLVE-DKLAGESVE--EIACGAYHVAVLT 573
++ + + G + YG LG D LP L+ + + ++V+ +++ G H ++
Sbjct: 468 ISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMS 527
Query: 574 SRNEVYTWGKGANGRLGHGDVEDRKTP--ALVEALKDRHVKYIACG 617
+Y+WG A RLG E++ TP + + KD CG
Sbjct: 528 IDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINS-KDSKPLLFTCG 572
Score = 175 (66.7 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 71/278 (25%), Positives = 121/278 (43%)
Query: 259 DKNVNYLGTRADVLLPRPLESNV-VLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGH 317
+ N N G + L + SN + + ++CG +A++T +G +FT+G GRLG
Sbjct: 313 NNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL 372
Query: 318 GVGKDIVQ--PHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-D 374
G ++Q P L++SL + ++ G H+ +T G ++++G ++ G LG G
Sbjct: 373 GEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFG--RNDQGQLGIGCFS 430
Query: 375 VSHWIPKRISG-------PLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG---- 423
IPK+I + + + V+ G +H+ I+ + +G +GVLG
Sbjct: 431 NQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSID 490
Query: 424 -HGDRK-NVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGD 481
GDR V + ++ I V+ G H A+ S+ G L++WG
Sbjct: 491 VQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAM----------SID-GSLYSWGCNA 539
Query: 482 KNRLGHGDKEPRLKPT-CVPALIDYNFHKVACGHSLTV 518
RLG E +L P C D CG +T+
Sbjct: 540 GQRLGFKSDENQLTPKKCFINSKDSKPLLFTCGEIITI 577
Score = 141 (54.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 35/102 (34%), Positives = 62/102 (60%)
Query: 288 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESL-TMTSVDFVTC--GE 344
I+ G H++ +T QG ++T+G+ G+LGHG + P L+E T S+ V+ G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 345 FHTCAVTMAGELYTWGDGTHNAGL-LGHGTDVSHW-IPKRIS 384
H+ A+T+ G++Y+WG G + L LG+G+ S++ +P+ I+
Sbjct: 253 KHSLALTICGKVYSWG-GNDSCQLGLGNGSSSSYYSLPQLIN 293
Score = 42 (19.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 825 ITDSLKKTNELLNQEVLKLRAQVESLRQRCEFQELELQK 863
+ D L K+ L Q +L+ R +++S + C+ +EL K
Sbjct: 978 VQDFLNKSK--LAQSLLEQREKLKSDYRFCKRNSIELSK 1014
Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 826 TDSLKKTNELLNQEVLKLRAQVESLRQRCEFQELE 860
T + T L+N++VL + + + R++ E ELE
Sbjct: 809 TTTTTTTTNLINKKVLVHQDEKQQQREKSE-TELE 842
Score = 39 (18.8 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 36 PKFYPFRLSNDETSLIWISSSGERSLKLASVSKI 69
PK F + ++ I++ G+ SL L K+
Sbjct: 231 PKLVEFFQTKPSLRVVSIANGGKHSLALTICGKV 264
>TAIR|locus:2130319 [details] [associations]
symbol:RLM3 "RESISTANCE TO LEPTOSPHAERIA MACULANS 3"
species:3702 "Arabidopsis thaliana" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0009817 "defense
response to fungus, incompatible interaction" evidence=IMP]
[GO:0009861 "jasmonic acid and ethylene-dependent systemic
resistance" evidence=IMP] [GO:2000071 "regulation of defense
response by callose deposition" evidence=IMP] [GO:0015979
"photosynthesis" evidence=RCA] InterPro:IPR000157
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 Pfam:PF01582
PRINTS:PR00364 PROSITE:PS50104 SMART:SM00255 GO:GO:0007165
EMBL:CP002687 GO:GO:0043531 GO:GO:0009817 GO:GO:0005622
InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514 SUPFAM:SSF52200
EMBL:AJ299417 IPI:IPI00531902 RefSeq:NP_849399.1 UniGene:At.4452
ProteinModelPortal:Q9FT77 SMR:Q9FT77 STRING:Q9FT77 PRIDE:Q9FT77
EnsemblPlants:AT4G16990.2 GeneID:827407 KEGG:ath:AT4G16990
TAIR:At4g16990 HOGENOM:HOG000064695 OMA:HEWIRTG PhylomeDB:Q9FT77
ProtClustDB:CLSN2690968 Genevestigator:Q9FT77 GO:GO:2000071
Uniprot:Q9FT77
Length = 796
Score = 178 (67.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 44/101 (43%), Positives = 56/101 (55%)
Query: 1003 SSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRV 1062
+S+ + +M N T +S S + QVE E IE EP VYIT DGTR K V
Sbjct: 506 NSQFQRNMDASPGGNKTSNQSTKDSPRASQVEKEKIEYCEPHVYITPAIFSDGTRAPKYV 565
Query: 1063 RFSRRRFGE-HQAETWWSENREKVYERYN-VRGLDKSSASG 1101
S RR + H A+TWW EN EKVYE +N + G+D+S G
Sbjct: 566 ESSSRRVTQVHHAKTWWPENCEKVYENHNNIYGIDRSIDGG 606
Score = 157 (60.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 36/76 (47%), Positives = 46/76 (60%)
Query: 1022 RSPALSVSSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSEN 1081
+ P VS+ QV+ + E E GVYITL L G LK + FSRR QA+ WWSEN
Sbjct: 706 QGPKSIVSAAQVDEKNFEYCEQGVYITLGILSGGIIVLKHLEFSRRM--AQQAKVWWSEN 763
Query: 1082 REKVYERYNVRGLDKS 1097
KVY+ +N+ G+DKS
Sbjct: 764 WIKVYQEHNICGIDKS 779
Score = 135 (52.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 1029 SSHQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYER 1088
S+ QV+AEWI GV I L DGT LK + ++R QA+ WW EN E+V ++
Sbjct: 428 SNSQVKAEWIH-LALGVSILLNIRSDGTTILKHLSYNRSM--AQQAKIWWYENLERVCKK 484
Query: 1089 YNVRGLDKSSASG 1101
YN+ G+D S+ G
Sbjct: 485 YNICGIDSSTDGG 497
Score = 47 (21.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 597 RK-TPALVEALKDRHVKYIACGSNYSAAI-CLHKWVSSAE 634
RK TP L+ A+++ + + NY+++ CL + V E
Sbjct: 49 RKITPELLLAIENSRISLVVFSKNYASSTWCLDELVKIQE 88
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 613 YIACGSNYSAAICLHKWVSSAEQLQCSACRQAFGFTRKRHNCYN 656
Y+AC +N S + +W+ A + ++ G T +H YN
Sbjct: 420 YVACLTNGSNSQVKAEWIHLALGVSILLNIRSDGTTILKHLSYN 463
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 150 (57.9 bits), Expect = 5.4e-09, Sum P(4) = 5.4e-09
Identities = 66/249 (26%), Positives = 97/249 (38%)
Query: 392 VASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVACGV 451
V + G +TA +T G+L+ +G G LG GD + P V L +AC
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSS 475
Query: 452 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVA 511
H+A E SGK++ WG D+ G + P + + +D K
Sbjct: 476 THSACYTE-----------SGKMYVWGQSDET----GKIQAIPSPLPIHSYLDREI-KSP 519
Query: 512 CGHSLTVGLTTSGHV--FTMGS---TVYGQLGNP---NADGKLPCLVEDKLAGESVEEIA 563
G + G + G V Q+G G +P + + L SV I
Sbjct: 520 NGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPG-IPIPLRNALENHSVRNIV 578
Query: 564 CGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALK--------DRHVKYIA 615
G +H+ LT EV T G+ G+LG D E+ P +V+ L D V IA
Sbjct: 579 MGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENE--PGIVKQLSFDPDGLNSDEFVVSIA 636
Query: 616 CGSNYSAAI 624
G +S A+
Sbjct: 637 AGEFHSVAL 645
Score = 137 (53.3 bits), Expect = 3.7e-08, Sum P(4) = 3.7e-08
Identities = 34/76 (44%), Positives = 42/76 (55%)
Query: 547 PCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEAL 606
P +VE K V+ IA G + A LT E+Y WG +G LG GD DR+TP V L
Sbjct: 408 PKMVEIKC----VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRL 463
Query: 607 KDRHVKYIACGSNYSA 622
K+ V IAC S +SA
Sbjct: 464 KNEVVSTIACSSTHSA 479
Score = 132 (51.5 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 494 LKPTCVPALIDYNFHK-VACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPNADGKLPCLVE 551
L+ TC P +++ K +A G T LT G ++ G +G+LG D + P V
Sbjct: 402 LQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVI 461
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHV 611
+L E V IAC + H A T ++Y WG+ G ++ +P + + DR +
Sbjct: 462 -RLKNEVVSTIACSSTHSACYTESGKMYVWGQSDET----GKIQAIPSPLPIHSYLDREI 516
Query: 612 K 612
K
Sbjct: 517 K 517
Score = 92 (37.4 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 259 DKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG 318
D N+++ R LE++ + + +A G H L+T G V+TWG S G+LG+
Sbjct: 312 DPNIHFTPIRISTHF---LENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYL 368
Query: 319 VG-KDIVQPHLLESLTMTSV 337
V + Q L + +M+S+
Sbjct: 369 VDTQQQQQQQLQQQQSMSSL 388
Score = 85 (35.0 bits), Expect = 5.4e-09, Sum P(4) = 5.4e-09
Identities = 20/86 (23%), Positives = 42/86 (48%)
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI 383
+ H LE+ + ++ V G +H +T G ++TWG ++ G LG+ D +++
Sbjct: 322 ISTHFLENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSN--GQLGYLVDTQQQQQQQL 379
Query: 384 SGP--LEGLQVASVTCGPWHTALITS 407
+ LQ ++ + P ++L T+
Sbjct: 380 QQQQSMSSLQPSASSSSPSSSSLQTT 405
Score = 76 (31.8 bits), Expect = 7.3e-08, Sum P(4) = 7.3e-08
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 356 LYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE-GLQVASVTCGPWHTALITSTGQLFTF 414
++T+G G++ A LG TD + P++++ E +V V CG +HT +T L+
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 415 G 415
G
Sbjct: 63 G 63
Score = 73 (30.8 bits), Expect = 3.7e-08, Sum P(4) = 3.7e-08
Identities = 23/61 (37%), Positives = 27/61 (44%)
Query: 304 VFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDF----VTCGEFHTCAVTMAGELYTW 359
VFT+G S G LG G D P + T +D V CG +HT VT LY
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 360 G 360
G
Sbjct: 63 G 63
Score = 69 (29.3 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 411 LFTFGDGTFGVLGHGDRKNVSYP--REVESLSGL--RTIAVACGVWHTAAVVE 459
+FTFG G+ G LG G + + P ++V + + R VACG +HT V +
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTD 55
Score = 67 (28.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 474 LFTWGDGDKNRLGHG----DKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTM 529
+FT+G G LG G D P + ID KVACG TV +T H++
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 530 G 530
G
Sbjct: 63 G 63
Score = 66 (28.3 bits), Expect = 3.7e-08, Sum P(4) = 3.7e-08
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 377 HWIPKRISGP-LEGLQ---VASVTCGPWHTALITSTGQLFTFGDGTFGVLGH 424
H+ P RIS LE + V G +H L+T G ++T+G + G LG+
Sbjct: 316 HFTPIRISTHFLENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGY 367
Score = 60 (26.2 bits), Expect = 7.3e-08, Sum P(4) = 7.3e-08
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLG 538
+VA G+ V LT G+V+T GS GQLG
Sbjct: 337 QVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 49 (22.3 bits), Expect = 5.4e-09, Sum P(4) = 5.4e-09
Identities = 19/76 (25%), Positives = 28/76 (36%)
Query: 265 LGTRADVLLPRPLESNVVLD----VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG 320
LG D P P + N + V +ACG H VT ++ G + + HG
Sbjct: 16 LGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYICGIKKDPK--HGTT 73
Query: 321 KDIVQPHLLESLTMTS 336
P + T T+
Sbjct: 74 LFYTSPPPTTTTTTTT 89
Score = 45 (20.9 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 440 SGLRTIA-VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGH 487
S L TI VA G +H V++T+ G ++TWG +LG+
Sbjct: 330 SPLNTIKQVALGNYHI-----VLLTEG------GNVWTWGSNSNGQLGY 367
Score = 40 (19.1 bits), Expect = 5.4e-09, Sum P(4) = 5.4e-09
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 900 AERLPPGVYD-----PENMRPAYIPNGLETNGVHYSDMNG 934
A LPP + P+N I NG + + H D NG
Sbjct: 700 ASTLPPSLKGLSGGLPDNANNT-IKNGKDKDNHHNGDSNG 738
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 143 LEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHP 177
++D T+N ++ SS + T +SS ++ P
Sbjct: 129 IKDGASNTTNDSTSSSSTSTSSLSSSLPPTNIETP 163
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 167 (63.8 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 73/301 (24%), Positives = 122/301 (40%)
Query: 240 GDVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
G+VY WG C+ + + T V P + N+V +A G H +
Sbjct: 184 GEVYAWGTFRCNEGILGFYQDKIKIQKTPWKV--PTFSKYNIV----QLAPGKDHILFLD 237
Query: 300 RQGEVFTWGEESGGRLGHGVGKDIVQPHL-LESLTMTSVDFVTCGEFHTCAVTMAGELYT 358
+G VF WG +LG V + L + V ++ GE H A+T +L +
Sbjct: 238 EEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVS 297
Query: 359 WGDGTHNAGLLGHGTDVSHWI----PKRISGPLEGLQVASVTCGPWHTALITSTGQLFTF 414
WG + G G DV PKR++ P + + + S+ G H+ +++ G L++
Sbjct: 298 WG--LNQFGQCGVSEDVEDGALVTKPKRLALP-DNVVIRSIAAGEHHSLILSQDGDLYSC 354
Query: 415 GDGTFGVLG--------------HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEV 460
G +G HG + V P ++ ++ ++ VA G H+ AV +
Sbjct: 355 GRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKS--VAAGSHHSVAVAQ- 411
Query: 461 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVP--ALIDYNFHKVACGHSLT 517
+G ++WG G+ +G G E + PT + A D+N V CG +
Sbjct: 412 ----------NGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQFS 461
Query: 518 V 518
V
Sbjct: 462 V 462
Score = 140 (54.3 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 66/296 (22%), Positives = 117/296 (39%)
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGTDVS--HWIPKRISGPLEGLQVASVTCGPWHTAL 404
+CA+ GE+Y WG N G+LG D P ++ + + G H
Sbjct: 177 SCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVP-TFSKYNIVQLAPGKDHILF 235
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIA-VACGVWHTAAVVEVIVT 463
+ G +F +G+G LG + GLR + +A G H A+ T
Sbjct: 236 LDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFAL-----T 290
Query: 464 QSSASVSSGKLFTWGD-GDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTT 522
+ + VS G L +G G + G + K +P + +A G ++ L+
Sbjct: 291 KDNKLVSWG-LNQFGQCGVSEDVEDGALVTKPKRLALPDNVV--IRSIAAGEHHSLILSQ 347
Query: 523 SGHVFTMGSTVYGQLGNP----------NADGKLPCL-VEDKLAG-ESVEEIACGAYHVA 570
G +++ G ++G P + GK + + KL + +A G++H
Sbjct: 348 DGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSV 407
Query: 571 VLTSRNEVYTWGKGANGRLGHGDVED-RKTPALVE--ALKDRHVKYIACGSNYSAA 623
+ Y+WG G +G G ED + P ++ A +D ++ + CG +S +
Sbjct: 408 AVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQFSVS 463
Score = 134 (52.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 57/176 (32%), Positives = 78/176 (44%)
Query: 457 VVEVIVTQ--SSASVSSGKLFTWGDGDKNR--LG-HGDKEPRLK-PTCVPALIDYNFHKV 510
VV++ T S A S+G+++ WG N LG + DK K P VP YN ++
Sbjct: 167 VVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQL 226
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG-KLPCLVEDKLAGESVEEIACGAYHV 569
A G + L G VF G+ QLG + +L L V+ IA G H
Sbjct: 227 APGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHC 286
Query: 570 AVLTSRNEVYTWGKGANGRLGHG-DVEDRK--TPALVEALKDRHV-KYIACGSNYS 621
LT N++ +WG G+ G DVED T AL D V + IA G ++S
Sbjct: 287 FALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS 342
Score = 104 (41.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 40/154 (25%), Positives = 66/154 (42%)
Query: 479 DGDKNRLGHGDKEPRLKPT-CVPALID-YNFHKVACGHSLTVGLTTSGHVFTMGST---- 532
DGD N L + P P P L + + ++A +++ L ++G V+ G+
Sbjct: 140 DGDLNEL---ESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNE 196
Query: 533 -VYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGH 591
+ G + K P V + ++ ++A G H+ L V+ WG G +LG
Sbjct: 197 GILGFYQDKIKIQKTPWKVPT-FSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR 255
Query: 592 GDVEDRKTPAL-VEALKDRHVKYIACGSNYSAAI 624
+E + L RHVKYIA G N+ A+
Sbjct: 256 KVMERFRLKTLDPRPFGLRHVKYIASGENHCFAL 289
Score = 78 (32.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 293 RHAALVTRQGEVFTWGEESGGRLGHGV---GKDIVQPHLLESLTMTSVDFVT--CGEFHT 347
+H L + ++F WG S LG G K++ +P L L ++ G HT
Sbjct: 37 KHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHT 96
Query: 348 CAVTMAGELYTWGDGTHNAGLLGHGT 373
A+ +++WG ++ G LG T
Sbjct: 97 LALDEESNVWSWG--CNDVGALGRDT 120
Score = 63 (27.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 241 DVYIWGE-VICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 299
D++ WG +C+ + A KN R + LPR E+ ++ A G H +
Sbjct: 47 DIFCWGTGSMCELGLGPLA-KNKEVKRPRLNPFLPRD-EAKII----SFAVGGMHTLALD 100
Query: 300 RQGEVFTWGEESGGRLG 316
+ V++WG G LG
Sbjct: 101 EESNVWSWGCNDVGALG 117
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/80 (25%), Positives = 35/80 (43%)
Query: 355 ELYTWGDGTH-NAGL--LGHGTDVSHWIPKRISG--PLEGLQVASVTCGPWHTALITSTG 409
+++ WG G+ GL L +V P R++ P + ++ S G HT +
Sbjct: 47 DIFCWGTGSMCELGLGPLAKNKEVKR--P-RLNPFLPRDEAKIISFAVGGMHTLALDEES 103
Query: 410 QLFTFGDGTFGVLGHGDRKN 429
++++G G LG D N
Sbjct: 104 NVWSWGCNDVGALGR-DTSN 122
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 184 (69.8 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 43/124 (34%), Positives = 65/124 (52%)
Query: 303 EVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSV---DFVTCGEFHTCAVTMAGELYTW 359
EV+TWG+ + LGHG P LL+ + + V V C +FH+ ++ G++YT
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLC-KFHSVFLSQQGQVYTC 201
Query: 360 GDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTF 419
G G G LGHG + + +P+ + G L G + V HT ++T G ++TFG TF
Sbjct: 202 GHG--RGGRLGHGDEQTCLVPRLVEG-LSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTF 258
Query: 420 GVLG 423
LG
Sbjct: 259 HQLG 262
Score = 153 (58.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 54/175 (30%), Positives = 80/175 (45%)
Query: 368 LLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALI-TSTGQLFTFGDGTFGVLGHGD 426
LL HG + + K PL+ L P H T +++T+GD T LGHG
Sbjct: 105 LLKHGVSL-YMQDKEGLSPLDLLMKDR----PAHVVFKNTDPTEVYTWGDNTNFTLGHGS 159
Query: 427 RKNVSYPREVESLSGLRTIA---VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 483
+ + +P ++ S R V C +H+ V ++Q G+++T G G
Sbjct: 160 QNSKHHPELLDLFSRSRVYVKQVVLCK-FHS-----VFLSQQ------GQVYTCGHGRGG 207
Query: 484 RLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLG 538
RLGHGD++ L P V L ++ +VA TV LT G V+T G + QLG
Sbjct: 208 RLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQLG 262
Score = 137 (53.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 41/130 (31%), Positives = 63/130 (48%)
Query: 241 DVYIWGEVICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTR 300
+VY WG+ N +N + D L R S V + + C H+ +++
Sbjct: 143 EVYTWGDNT--NFTLGHGSQNSKHHPELLD-LFSR---SRVYVK-QVVLCKF-HSVFLSQ 194
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
QG+V+T G GGRLGHG + + P L+E L+ S V + HT +T G +YT+G
Sbjct: 195 QGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 361 DGT-HNAGLL 369
T H G++
Sbjct: 255 LNTFHQLGII 264
Score = 43 (20.2 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 818 GLSFSKSITDSLKKTNELLNQEVLKLRAQVESLRQRCEF 856
GLS S D ++ NE +N K +++ +++C F
Sbjct: 729 GLSNLSSRLDGVRYENEKINVIAKKTGNKLKLSQKKCSF 767
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 161 (61.7 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 69/258 (26%), Positives = 112/258 (43%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC--GEFHTCA 349
V H + T G V T G+ G+LG +G+++++ +L D V G HT
Sbjct: 25 VSHRSHSTEPGLVLTLGQGDVGQLG--LGENVME-RKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 82 LSKSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTD 136
Query: 408 TGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
G++F +G GV+G + K P +V+ + + VA G H +
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLY 194
Query: 465 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALI-----DYNFHKVACGHSLTVG 519
+ G+L + NR G E L P CV F CG T
Sbjct: 195 TLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 520 LTTSGHVFTMGSTVYGQL 537
++ GHV+ G + Y QL
Sbjct: 255 ISHEGHVYGFGLSNYHQL 272
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 47/168 (27%), Positives = 81/168 (48%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG +V+ +P ++ DV G H +++ G+V+++G G LG
Sbjct: 44 DVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG 423
+P ++ + ++VAS G H ++T+ G L+T G G G LG
Sbjct: 161 KSMVPVQVQLDVPVVKVAS---GNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 60/219 (27%), Positives = 94/219 (42%)
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
I KR S P + + S H + T G + T G G G LG G+ NV ++
Sbjct: 6 IAKRRSPPADAIP-KSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGE--NVMERKKPAL 62
Query: 439 LSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
+S + A G HT + + SG+++++G D+ LG +
Sbjct: 63 VSIPEDVVQAEAGGMHTVCLSK-----------SGQVYSFGCNDEGALGRDTSVEGSE-- 109
Query: 498 CVPALIDYNFH--KVACGHSLTVGLTTSGHVFTMGS--TVYGQLG--NPNADGKLPCLVE 551
VP ++ +V+ G S T LT G VF GS G +G P +P V+
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+ V ++A G H+ +LT+ ++YT G G G+LG
Sbjct: 170 LDVP---VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 71/256 (27%), Positives = 104/256 (40%)
Query: 346 HTCAVTMAGELYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPLEGLQVASVTCGPWHTAL 404
H T G + T G G + G LG G +V P +S P + +Q + G HT
Sbjct: 27 HRSHSTEPGLVLTLGQG--DVGQLGLGENVMERKKPALVSIPEDVVQAEA---GGMHTVC 81
Query: 405 ITSTGQLFTFGDGTFGVLGHGDRKNVS--YPREVESLSGLRTIAVACGVWHTAAVVEVIV 462
++ +GQ+++FG G LG S P +VE + + V+ G HTAA+ +
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSAGDSHTAALTD--- 136
Query: 463 TQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTT 522
V F +G L K + P V +D KVA G+ V LT
Sbjct: 137 ---DGRVFLWGSFRDNNGVIGLLEPMKKS--MVP--VQVQLDVPVVKVASGNDHLVMLTA 189
Query: 523 SGHVFTMGSTVYGQLGN-P----NADGK-------LPCLVEDKLAGES----VEEIACGA 566
G ++T+G GQLG P N G+ +P V K G ++ CGA
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 567 YHVAVLTSRNEVYTWG 582
Y ++ VY +G
Sbjct: 250 YFTFAISHEGHVYGFG 265
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 142 (55.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 297 LVTRQGEVFTWGEESGGRLG--HGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAG 354
++T G+V + G S G+LG HG + +V P +E L V + G H A T +G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 355 ELYTWGDGTHNAGL-LGHGTDVSHWI----PKRISGPLEGLQVASVTCGPWHTALITSTG 409
++ WG G + G L G + + P R++G LE + V G H+A +T G
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDAG 117
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVES--LSGLRTIAVACGVWHTAA 456
+++ +G G L + + + P+++E+ + A+ G H A
Sbjct: 118 EVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
Score = 138 (53.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 55/180 (30%), Positives = 81/180 (45%)
Query: 404 LITSTGQLFTFGDGTFGVLG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
++T GQ+ + G +FG LG HG R+ V P+ +E L + + +A G+ H AV
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRH--AV---- 52
Query: 462 VTQSSASVSSGKLFTWGDGDKN---RLGHGDKEPRL----KPTCVPALIDYNFHKVACGH 514
A+ +SG +F WG G + RL G P +P+ V L + V G
Sbjct: 53 -----AATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 107
Query: 515 SLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHVAVLT 573
+ LT +G V+ GS +GQL N A +P +E E V I G H+ T
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQT 167
Score = 125 (49.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 41/133 (30%), Positives = 60/133 (45%)
Query: 288 IACGVRHAALVTRQGEVFTWGE---ESGGRLGHGVGKDIV----QPHLLESLTMTSVDFV 340
IA G+RHA T G VF WG G RL G + +P + L + V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 341 TCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQVASVTCGP 399
G H+ ++T AGE+Y WG H G L + +P++I + +V ++ G
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKH--GQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSG- 159
Query: 400 WHTALITSTGQLF 412
W T L+ TG L+
Sbjct: 160 W-THLVAQTGLLW 171
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 37/114 (32%), Positives = 53/114 (46%)
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED--KLAGESVEEIACGAYHVAVLTSRNE 577
LT +G V + GS +GQLG P+ G C+V +L E V IA G H T+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPH--GPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGI 59
Query: 578 VYTWGKG---ANGRLGHGDVED----RKTPALVEALKDRHVKYIACGSNYSAAI 624
V+ WG G RL G K P+ V L++ + GS++SA++
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 113
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 142 (55.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 297 LVTRQGEVFTWGEESGGRLG--HGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAG 354
++T G+V + G S G+LG HG + +V P +E L V + G H A T +G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 355 ELYTWGDGTHNAGL-LGHGTDVSHWI----PKRISGPLEGLQVASVTCGPWHTALITSTG 409
++ WG G + G L G + + P R++G LE + V G H+A +T G
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDAG 117
Query: 410 QLFTFGDGTFGVLGHGDRKNVSYPREVES--LSGLRTIAVACGVWHTAA 456
+++ +G G L + + + P+++E+ + A+ G H A
Sbjct: 118 EVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
Score = 135 (52.6 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 54/176 (30%), Positives = 80/176 (45%)
Query: 404 LITSTGQLFTFGDGTFGVLG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
++T GQ+ + G +FG LG HG R+ V P+ +E L + + +A G+ H AV
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRH--AV---- 52
Query: 462 VTQSSASVSSGKLFTWGDGDKN---RLGHGDKEPRL----KPTCVPALIDYNFHKVACGH 514
A+ +SG +F WG G + RL G P +P+ V L + V G
Sbjct: 53 -----AATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 107
Query: 515 SLTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDK-LAGESVEEIACGAYHV 569
+ LT +G V+ GS +GQL N A +P +E E V I G H+
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHL 163
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 37/114 (32%), Positives = 53/114 (46%)
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED--KLAGESVEEIACGAYHVAVLTSRNE 577
LT +G V + GS +GQLG P+ G C+V +L E V IA G H T+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPH--GPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGI 59
Query: 578 VYTWGKG---ANGRLGHGDVED----RKTPALVEALKDRHVKYIACGSNYSAAI 624
V+ WG G RL G K P+ V L++ + GS++SA++
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 113
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 288 IACGVRHAALVTRQGEVFTWGE---ESGGRLGHGVGKDIV----QPHLLESLTMTSVDFV 340
IA G+RHA T G VF WG G RL G + +P + L + V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 341 TCGEFHTCAVTMAGELYTWGDGTH 364
G H+ ++T AGE+Y WG H
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKH 127
>DICTYBASE|DDB_G0286231 [details] [associations]
symbol:DDB_G0286231 "FYVE-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0046872
"metal ion binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
dictyBase:DDB_G0286231 GO:GO:0046872 EMBL:AAFI02000085
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG247076
RefSeq:XP_637797.1 ProteinModelPortal:Q54M34 PRIDE:Q54M34
EnsemblProtists:DDB0305107 GeneID:8625511 KEGG:ddi:DDB_G0286231
InParanoid:Q54M34 OMA:CDECYRM ProtClustDB:CLSZ2430113
Uniprot:Q54M34
Length = 88
Score = 139 (54.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
KWV + C C+ +F +RH+C CGLV C+ CSS +A L N P RVCD
Sbjct: 22 KWVEDSHCHNCHKCKASFTLLNRRHHCRRCGLVFCNRCSSNEAKIPQLNYN-FVPVRVCD 80
Query: 688 CCFAKLN 694
C+ +N
Sbjct: 81 ECYRMVN 87
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 168 (64.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 52/155 (33%), Positives = 71/155 (45%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
+ + V HT ++T+ +LF FGD + G LG G + R VESL G R I +
Sbjct: 467 ISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKG-RDIQ-SV 524
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG-DKEPRLKPTCVPALIDYNFH 508
GV + +V+ G L T+G KN LG G D + KP + L+ N
Sbjct: 525 GVGNYFSVI---------CCDRGTLLTFGTA-KN-LGLGKDAKDSAKPMLLEQLLRENIK 573
Query: 509 KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD 543
+ CGH V + SG GS YGQLG P +
Sbjct: 574 DIYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLE 608
Score = 145 (56.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 75/304 (24%), Positives = 119/304 (39%)
Query: 336 SVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASV 395
S+ V + HT +T EL+ +GD ++ G LG G S R+ L+G + SV
Sbjct: 468 SIKQVALSKTHTMVLTNDNELFGFGD--NSCGQLGFGK-FSKMENGRLVESLKGRDIQSV 524
Query: 396 TCGPWHTALITSTGQLFTFGDGTFGVLGHG-DRKNVSYPREVESLSGLRTIAVACGVWHT 454
G + + + G L TFG T LG G D K+ + P +E L + CG H
Sbjct: 525 GVGNYFSVICCDRGTLLTFG--TAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHV 582
Query: 455 AAVVEVIVTQSSASVSSGKL----FTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKV 510
AV+E S G+L + P +P +
Sbjct: 583 VAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMPSNKKIVYG 642
Query: 511 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNADG------KLPCLVEDK---LAG--ESV 559
G T+ L+ G + MGS + +L G K P +K L G E V
Sbjct: 643 KAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGFPERV 702
Query: 560 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPAL--VEALKDRHVKYIACG 617
+ + G+YH V+ +V +G+ N LG G+ + + V++L ++ CG
Sbjct: 703 VDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKPVKSLLHHACTHVLCG 762
Query: 618 SNYS 621
++
Sbjct: 763 DGFT 766
Score = 138 (53.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 63/274 (22%), Positives = 106/274 (38%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTM 334
R +ES D+ + G + + +G + T+G LG KD +P LLE L
Sbjct: 511 RLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGTAKNLGLGKDA-KDSAKPMLLEQLLR 569
Query: 335 TSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIS---------G 385
++ + CG H AV +GE WG + G LG T + P ++ G
Sbjct: 570 ENIKDIYCGHDHVVAVLESGECLGWGSNQY--GQLGLPTLEHFFAPTKVFFLNEATALYG 627
Query: 386 PLE-----GLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLS 440
P + ++ G T L++ G L G L R + +E ++ +
Sbjct: 628 PFQIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGF-FTKEKKTPN 686
Query: 441 G-LRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 499
+ + G V S + SG++ +G D LG G+ + ++ CV
Sbjct: 687 DYVNKPTILQGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQ-KMAVRCV 745
Query: 500 -P--ALIDYNFHKVACGHSLTVGLTTSGHVFTMG 530
P +L+ + V CG T+ TT ++ G
Sbjct: 746 KPVKSLLHHACTHVLCGDGFTLVSTTEQELYFWG 779
Score = 49 (22.3 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 684 RVCDCCFAKLNKVSEASNRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVDLIKQLDCKA 743
R D C KL K+ +A+ ++NSL R E +D KS +K + + + + L+ K
Sbjct: 903 RFDDSC-EKL-KIMDATAKQNSLLR---EIEDL--KSKIKEQDTTFEGHRNQMSDLESKL 955
Query: 744 AK-QGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTT 782
+ Q K+ S +R S+ P ++V R T
Sbjct: 956 QELQAKQ----SFLRKSEPPPAYDRRNVTYNKLFPERENT 991
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 149 (57.5 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R +P LV+AL + + GSN+
Sbjct: 929 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQ-VTAGSNH 987
Query: 621 SAAICL 626
+A + +
Sbjct: 988 TAVLLM 993
Score = 141 (54.7 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 44/123 (35%), Positives = 59/123 (47%)
Query: 425 GDR---KNVSYPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
GD+ K +YP V LR + V+CG H+ ++E +G ++T+G G
Sbjct: 904 GDKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVVLME-----------NGDVYTFGYG 952
Query: 481 DKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGNP 540
+LGHGD R PT V AL + +V G + T L G VFT GS GQLG P
Sbjct: 953 QHGQLGHGDVNSRGSPTLVQALPGPST-QVTAGSNHTAVLLMDGQVFTFGSFSKGQLGRP 1011
Query: 541 NAD 543
D
Sbjct: 1012 ILD 1014
Score = 134 (52.2 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 479 DGDKNRLGHGDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTVY 534
DG R GDK+ T P + ++ +V+CG +V L +G V+T G +
Sbjct: 898 DGSSER---GDKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQH 954
Query: 535 GQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
GQLG+ + + + P LV+ L G S + + G+ H AVL +V+T+G + G+LG
Sbjct: 955 GQLGHGDVNSRGSPTLVQ-ALPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 127 (49.8 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
L+ V+CG H+ ++ G ++TFG G G LGHGD + P V++L G T V
Sbjct: 925 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPST-QVTA 983
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
G HTA ++ G++FT+G K +LG
Sbjct: 984 GSNHTAVLL-----------MDGQVFTFGSFSKGQLG 1009
Score = 99 (39.9 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
Identities = 39/135 (28%), Positives = 55/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVD-----FVTCGEFHTC 348
HA LV G VF G S G G K QP + M ++ + C +
Sbjct: 584 HALLVAEDGSVFFTGSASKGEDGEST-KSRRQPKPYKPKKMIKLETKMAVYTACNNGSSS 642
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
VT GELY +G + T ++S L+G V V G HT ++T +
Sbjct: 643 IVTKDGELYMFGKDA----IYSDSTC-------QVSD-LKGHFVTQVAMGKAHTCVLTKS 690
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 691 GEVWTFGVNNKGQCG 705
Score = 83 (34.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 287 HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFH 346
+ AC +++VT+ GE++ +G+++ + D + L V V G+ H
Sbjct: 633 YTACNNGSSSIVTKDGELYMFGKDA-------IYSDSTCQ--VSDLKGHFVTQVAMGKAH 683
Query: 347 TCAVTMAGELYTWGDGTHNAGLLGHGT 373
TC +T +GE++T+G +N G G T
Sbjct: 684 TCVLTKSGEVWTFG--VNNKGQCGRDT 708
Score = 70 (29.7 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG 320
V +A G H ++T+ GEV+T+G + G+ G G
Sbjct: 674 VTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCGRDTG 709
Score = 48 (22.0 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
Identities = 24/90 (26%), Positives = 38/90 (42%)
Query: 703 RNSLPRLSGENKDRLDKSDLKLSKSAMPSNVDL-IKQLDCKA----AKQGKKADAFSLVR 757
R+S P+ R S +S+ P + +L K K ++ K+D+++L
Sbjct: 2794 RSSSPKQKTFTSGRSSPSSTSSPRSSSPHDKNLPAKVSPSKVHLDPPRERSKSDSYTL-- 2851
Query: 758 SSQAPSLLQLKDVVLTTAADLRRTTPKPIL 787
P L+ K V L R T+PKP L
Sbjct: 2852 ---DPDTLRKKKVPLMEPLRGRSTSPKPKL 2878
Score = 39 (18.8 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 538 GNPNADGKLPC--LVEDKLAGESVEEIACGAY--HVAVLTSRNEVYTWGKGANG---RLG 590
G+ NA+ + P +V++ L E VE A + +E++ +G++ +G
Sbjct: 2886 GSSNAENRAPSPHVVQENLHSEVVEVCRSSALLSNDEGNDENSELHNAEEGSSKVHFSIG 2945
Query: 591 HGDV----EDRKTPALVEALKDRHVK 612
V E R +P + RHV+
Sbjct: 2946 KAPVKEELESRSSPKVSRKTSSRHVR 2971
Score = 38 (18.4 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 267 TRADVL---LPRP---LESNVVLDVHHIACGVRHAALVTRQGE 303
T+ D L P P L SN ++ C VRH L +Q E
Sbjct: 116 TKTDTLDGAFPVPDIKLHSNP--SAFNVYCNVRHCVLDWQQKE 156
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 149 (57.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 47/168 (27%), Positives = 81/168 (48%)
Query: 261 NVNYLGTRADVL-LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV 319
+V LG +V+ +P ++ DV G H +++ G+V+++G G LG
Sbjct: 44 DVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDT 103
Query: 320 ---GKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVS 376
G ++V P +E V V+ G+ HT A+T G ++ WG N G++G +
Sbjct: 104 SVEGSEMV-PGKVE--LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMK 160
Query: 377 H-WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLG 423
+P ++ + ++VAS G H ++T+ G L+T G G G LG
Sbjct: 161 KSMVPVQVQLDVPVVKVAS---GNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/202 (28%), Positives = 99/202 (49%)
Query: 292 VRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTC--GEFHTCA 349
V H + T G V T G+ G+LG +G+++++ +L D V G HT
Sbjct: 25 VSHRSHSTEPGLVLTLGQGDVGQLG--LGENVME-RKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 350 VTMAGELYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQVASVTCGPWHTALITS 407
++ +G++Y++G ++ G LG T V S +P ++ L+ +V V+ G HTA +T
Sbjct: 82 LSKSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTD 136
Query: 408 TGQLFTFGD--GTFGVLGHGD-RKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQ 464
G++F +G GV+G + K P +V+ + + VA G H V++T
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHL-----VMLT- 188
Query: 465 SSASVSSGKLFTWGDGDKNRLG 486
+ G L+T G G++ +LG
Sbjct: 189 -----ADGDLYTLGCGEQGQLG 205
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 60/219 (27%), Positives = 94/219 (42%)
Query: 379 IPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVES 438
I KR S P + + S H + T G + T G G G LG G+ NV ++
Sbjct: 6 IAKRRSPPADAIP-KSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGE--NVMERKKPAL 62
Query: 439 LSGLRTIAVA-CGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 497
+S + A G HT + + SG+++++G D+ LG +
Sbjct: 63 VSIPEDVVQAEAGGMHTVCLSK-----------SGQVYSFGCNDEGALGRDTSVEGSE-- 109
Query: 498 CVPALIDYNFH--KVACGHSLTVGLTTSGHVFTMGS--TVYGQLG--NPNADGKLPCLVE 551
VP ++ +V+ G S T LT G VF GS G +G P +P V+
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 552 DKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+ V ++A G H+ +LT+ ++YT G G G+LG
Sbjct: 170 LDVP---VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 135 (52.6 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 40/135 (29%), Positives = 65/135 (48%)
Query: 297 LVTRQGEVFTWGEESGGRLG--HGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAG 354
++T G+V + G S G+LG HG + +V P +E L V + G H A T +G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 355 ELYTWGDGTHNAGL-LGHGTDVSHWI----PKRISGPLEGLQVASVTCGPWHTALITSTG 409
++ WG G + G L G + + P R++G LE + V G H+A +T G
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDAG 117
Query: 410 QLFTFGDGTFGVLGH 424
+++ +G G L +
Sbjct: 118 EVYVWGSNKHGQLAN 132
Score = 128 (50.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 47/148 (31%), Positives = 70/148 (47%)
Query: 404 LITSTGQLFTFGDGTFGVLG--HGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 461
++T GQ+ + G +FG LG HG R+ V P+ +E L + + +A G+ H AV
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRH--AV---- 52
Query: 462 VTQSSASVSSGKLFTWGDGDKN---RLGHGDKEPRL----KPTCVPALIDYNFHKVACGH 514
A+ +SG +F WG G + RL G P +P+ V L + V G
Sbjct: 53 -----AATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 107
Query: 515 SLTVGLTTSGHVFTMGSTVYGQLGNPNA 542
+ LT +G V+ GS +GQL N A
Sbjct: 108 DHSASLTDAGEVYVWGSNKHGQLANEAA 135
Score = 115 (45.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/114 (32%), Positives = 53/114 (46%)
Query: 520 LTTSGHVFTMGSTVYGQLGNPNADGKLPCLVED--KLAGESVEEIACGAYHVAVLTSRNE 577
LT +G V + GS +GQLG P+ G C+V +L E V IA G H T+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPH--GPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGI 59
Query: 578 VYTWGKG---ANGRLGHGDVED----RKTPALVEALKDRHVKYIACGSNYSAAI 624
V+ WG G RL G K P+ V L++ + GS++SA++
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 113
Score = 111 (44.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 288 IACGVRHAALVTRQGEVFTWGE---ESGGRLGHGVGKDIV----QPHLLESLTMTSVDFV 340
IA G+RHA T G VF WG G RL G + +P + L + V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 341 TCGEFHTCAVTMAGELYTWGDGTH 364
G H+ ++T AGE+Y WG H
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKH 127
Score = 101 (40.6 bits), Expect = 0.00040, P = 0.00040
Identities = 43/135 (31%), Positives = 57/135 (42%)
Query: 471 SGKLFTWGDGDKNRLG--HGDKEPRLKPTCV-PALIDYNFHKVAC---GHSLTVGLTTSG 524
+G++ + G +LG HG PR CV P I+ + KV C G V T SG
Sbjct: 5 NGQVLSCGSNSFGQLGVPHG---PR---RCVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
Query: 525 HVFTMGSTVYGQLGNPNADGK-LPCLVEDK----LAGESVEEIAC---GAYHVAVLTSRN 576
VF G T G G+ LP K + G + C G+ H A LT
Sbjct: 59 IVFQWG-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 577 EVYTWGKGANGRLGH 591
EVY WG +G+L +
Sbjct: 118 EVYVWGSNKHGQLAN 132
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 150 (57.9 bits), Expect = 9.6e-08, Sum P(4) = 9.6e-08
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 489 DKEP-RLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTVYGQLGNPNAD 543
DK+P R+ P P L+ +VACG TV LT +G V+T GS YGQLG+ +
Sbjct: 946 DKDPPRVAPLA-PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQ 1004
Query: 544 GKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+ V ++ G ++ ++A G+ H +LTS+ VYT+G G+LG
Sbjct: 1005 -PVSGPVRVQVPG-AISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLG 1049
Score = 125 (49.1 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
Identities = 45/140 (32%), Positives = 69/140 (49%)
Query: 433 PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEP 492
P+ ++ S + VACG+ HT V++T + G+++T+G +LG GD +P
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHT-----VVLTLA------GEVYTFGSNQYGQLGSGDLQP 1005
Query: 493 RLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN-PNADG-KLPCLV 550
P V + +VA G + TV LT+ G V+T G+ GQLG P+ G K P
Sbjct: 1006 VSGPVRVQ--VPGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPPQD 1063
Query: 551 EDKLAGESVEEIACGAYHVA 570
+D G + A G+ VA
Sbjct: 1064 DDSPVGAGSDGGAGGSPTVA 1083
Score = 119 (46.9 bits), Expect = 0.00033, Sum P(5) = 0.00033
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 559 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGS 618
V ++ACG +H VLT EVYT+G G+LG GD++ P V+ + +A GS
Sbjct: 968 VVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQV--PGAISQVAAGS 1025
Query: 619 NYSAAI 624
N++ +
Sbjct: 1026 NHTVLL 1031
Score = 101 (40.6 bits), Expect = 9.6e-08, Sum P(4) = 9.6e-08
Identities = 48/173 (27%), Positives = 68/173 (39%)
Query: 284 DVHHIACGVR--HAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVD--- 338
++ H+A G HA LV G VF G G G K+ QP ++ MT +D
Sbjct: 650 NIVHVAVGHDGIHALLVNDDGTVFFAGTARRGEDGDS-SKNRRQPKAVKPKKMTKIDGHV 708
Query: 339 --FVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVT 396
C + VT G+L +G T + +G +S LE V V
Sbjct: 709 VVHAACNNGTSAFVTKTGKLIMYGKDTAHCDAMGF-----------VSELLEQ-HVTKVA 756
Query: 397 CGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
G H + + GQLF+FG G G K + ++V + T A AC
Sbjct: 757 LGKAHCVALNAKGQLFSFGLNNKGQCGRIFNK-LQPVKDVPPFASSST-AAAC 807
Score = 68 (29.0 bits), Expect = 0.00040, Sum P(5) = 0.00040
Identities = 41/157 (26%), Positives = 64/157 (40%)
Query: 273 LPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLG-HGVGKDIVQPHL-LE 330
LP P V DV +ACG + G V+ +G+ + LG VG+ P L L
Sbjct: 588 LPAPCRDADV-DVMGMACGKEFGLVRASNGRVYYYGKSAA--LGLKCVGRT---PTLKLT 641
Query: 331 SLTMT---SVDFVTCGE--FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWI----PK 381
L ++ ++ V G H V G ++ GT G G + PK
Sbjct: 642 ELVISKAANIVHVAVGHDGIHALLVNDDGTVFF--AGTARRGEDGDSSKNRRQPKAVKPK 699
Query: 382 RISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGT 418
+++ ++G V C +A +T TG+L +G T
Sbjct: 700 KMT-KIDGHVVVHAACNNGTSAFVTKTGKLIMYGKDT 735
Score = 46 (21.3 bits), Expect = 3.1e-07, Sum P(5) = 3.1e-07
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 833 NELLNQEVLKLRAQVESLRQRC 854
+E+ N + + LR ES+RQ C
Sbjct: 3060 DEIENDDGVWLRLSTESIRQHC 3081
Score = 43 (20.2 bits), Expect = 9.6e-08, Sum P(4) = 9.6e-08
Identities = 16/71 (22%), Positives = 25/71 (35%)
Query: 979 DDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDSENGTRPRSPALSVSSHQVEAEWI 1038
DD PV +G G + V + P +G++ P L V + + + W
Sbjct: 1064 DDSPVGAGSDGGAGGSPTVAPVGMPGPERSQSPANVQPSGSKEMPPLLPVLTQRQKFLW- 1122
Query: 1039 EQYEPGVYITL 1049
PG L
Sbjct: 1123 -NCSPGAVFGL 1132
Score = 41 (19.5 bits), Expect = 3.1e-07, Sum P(5) = 3.1e-07
Identities = 15/47 (31%), Positives = 19/47 (40%)
Query: 952 TGVDSVSNNGTGGLSQFLRETTGASGRDDQPVIRLPNGSVGVLANSS 998
TG D V T L + L E T S + V RLP + S+
Sbjct: 4554 TGSDRVQRQVTALLRRILPEITPESFAELLGVQRLPPADYSIAHQSA 4600
Score = 40 (19.1 bits), Expect = 9.6e-08, Sum P(4) = 9.6e-08
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 1098 SASGQAARRPEGTLSP 1113
SASG+A+ PE SP
Sbjct: 3134 SASGEASPEPEPDPSP 3149
Score = 38 (18.4 bits), Expect = 3.1e-07, Sum P(5) = 3.1e-07
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 745 KQGKKADAFSLVRSSQAPSLL 765
K KKA+ + V S Q P++L
Sbjct: 1564 KSSKKANNGTDVNSGQIPAIL 1584
Score = 38 (18.4 bits), Expect = 3.1e-07, Sum P(5) = 3.1e-07
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 603 VEALKDRHVKYIACGSNYSAAICLHKW 629
+E L + H+ ++AC + L KW
Sbjct: 1811 LEILDECHLSFVACFDAFYPTSSL-KW 1836
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 147 (56.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + + GSN+
Sbjct: 920 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 978
Query: 621 SAAICL 626
+A + +
Sbjct: 979 TAVLVM 984
Score = 140 (54.3 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 44/126 (34%), Positives = 59/126 (46%)
Query: 420 GVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
G G D V+ YP V +R + V+CG H+ ++E +G ++T+
Sbjct: 892 GERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLME-----------NGDVYTF 940
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
G G +LGHGD R PT V AL + +V G + T L G VFT GS GQL
Sbjct: 941 GYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLVMDGQVFTFGSFSKGQL 999
Query: 538 GNPNAD 543
G P D
Sbjct: 1000 GRPILD 1005
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 37/118 (31%), Positives = 62/118 (52%)
Query: 479 DGDKNRLGH-GDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
D K+ G G+K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 885 DKHKDASGERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQ 944
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + + G+ H AVL +V+T+G + G+LG
Sbjct: 945 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQ-VTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 127 (49.8 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAVAC 449
++ V+CG H+ ++ G ++TFG G G LGHGD + P V++L G T V
Sbjct: 916 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTA 974
Query: 450 GVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 486
G HTA +V G++FT+G K +LG
Sbjct: 975 GSNHTAVLV-----------MDGQVFTFGSFSKGQLG 1000
Score = 83 (34.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 35/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTSVDFVTCGEFH---TCA 349
HA LV G VF G S G G + +P+ + + V C + +
Sbjct: 569 HALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSV 628
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 629 ISKDGELYMFGKDAIYS--------DSSSLV-----SDLKGHFVTQVAMGKAHTCVLMKN 675
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 676 GEVWTFGVNNKGQCG 690
Score = 75 (31.5 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
AC ++++++ GE++ +G+++ + D L+ L V V G+ HTC
Sbjct: 620 ACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVSDLKGHFVTQVAMGKAHTC 670
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGT 373
+ GE++T+G +N G G T
Sbjct: 671 VLMKNGEVWTFG--VNNKGQCGRDT 693
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG 320
V +A G H ++ + GEV+T+G + G+ G G
Sbjct: 659 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 694
Score = 43 (20.2 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P I N+ +RS+ + K++
Sbjct: 286 VASWGETGRTLQAISAILTNNGSHACQTIQVPT--------ILNSLQRSVQAVLVGKIQV 337
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 338 QDWFSNGIK 346
Score = 37 (18.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 271 VLLPR-PLESNVVLDVHHIACGVRHAALVTRQGE 303
V++P L SN +I C VRH L ++ E
Sbjct: 134 VIIPDIKLHSNP--SAFNIYCNVRHCVLEWQKKE 165
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 106 (42.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT------DVSH 377
V P + +L +D V CG HT T +LY++G ++ G+LG T D+ H
Sbjct: 29 VNPTAIPNLP-NDIDEVICGSMHTIIKTTDDKLYSFG--CNDMGVLGRKTYSSGIKDLEH 85
Query: 378 WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLF-TFGDGTF-GVLG 423
P I+ ++ +TCG HTA++ G+++ T G + GVLG
Sbjct: 86 -SPTLINFTFPS-KIKKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 102 (41.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 474 LFTWGDGDKNRLGHG------DKEPRLK---PTCVPAL---IDYNFHKVACGHSLT-VGL 520
+FT G+ D ++ + +E R+K P C + F + CG + T V L
Sbjct: 219 IFTMGNSDSCQVCNNFYEQEDSEEQRIKYVYPNCYHYTYFGFENKFENIYCGGNNTYVQL 278
Query: 521 TTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSRNEVY 579
S V+ +G YG G + D + + +L+ + + ++ G L + N++Y
Sbjct: 279 ENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKKINQLCGGQSFTVCLLNNNDLY 338
Query: 580 TWGKGANGRLGHGDVEDRKTPALVEALKDRH--VKYIACGSNY 620
WG LG +D +P ++ K + VK I CG+++
Sbjct: 339 IWGN--REILGMEYDDDAYSPLELDFFKKNNYTVKNITCGTDH 379
Score = 102 (41.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 280 NVVLDVHHIACGVRHAALVTRQGEVFTWG-EESG--GRLGHGVG-KDIVQPHLLESLTMT 335
N+ D+ + CG H + T +++++G + G GR + G KD+ L + T
Sbjct: 36 NLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFP 95
Query: 336 S-VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG 370
S + +TCG+ HT + G++Y G G+LG
Sbjct: 96 SKIKKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 82 (33.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/89 (26%), Positives = 40/89 (44%)
Query: 499 VPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST-VYGQLGNPNADGKLPCLVEDKLAGE 557
+ L +++ G S TV L + ++ G+ + G + +A L L K
Sbjct: 310 IQELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYSPLE-LDFFKKNNY 368
Query: 558 SVEEIACGAYHVAVLTSRNEVYTWGKGAN 586
+V+ I CG H VLT +++ WG G N
Sbjct: 369 TVKNITCGTDHCLVLTDNGKLFGWGTGGN 397
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 392 VASVTCGPWHTALITSTGQLFTFGDGTFGVLGH----GDRKNVSY-PREVESLSGLRTIA 446
+ V CG HT + T+ +L++FG GVLG K++ + P + +
Sbjct: 41 IDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSKIKK 100
Query: 447 VACGVWHTAAVVE---VIVTQSSASVSSGKLFTWGDGDKNRL 485
+ CG HTA ++E V +T G L G+KN L
Sbjct: 101 ITCGDNHTAILLENGKVYITGGFRDYC-GVLGLPSFGEKNEL 141
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 106 (42.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 324 VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT------DVSH 377
V P + +L +D V CG HT T +LY++G ++ G+LG T D+ H
Sbjct: 29 VNPTAIPNLP-NDIDEVICGSMHTIIKTTDDKLYSFG--CNDMGVLGRKTYSSGIKDLEH 85
Query: 378 WIPKRISGPLEGLQVASVTCGPWHTALITSTGQLF-TFGDGTF-GVLG 423
P I+ ++ +TCG HTA++ G+++ T G + GVLG
Sbjct: 86 -SPTLINFTFPS-KIKKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 102 (41.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 39/163 (23%), Positives = 71/163 (43%)
Query: 474 LFTWGDGDKNRLGHG------DKEPRLK---PTCVPAL---IDYNFHKVACGHSLT-VGL 520
+FT G+ D ++ + +E R+K P C + F + CG + T V L
Sbjct: 219 IFTMGNSDSCQVCNNFYEQEDSEEQRIKYVYPNCYHYTYFGFENKFENIYCGGNNTYVQL 278
Query: 521 TTSGHVFTMGSTVYGQLGNPNADGKLPCLVE-DKLAGESVEEIACGAYHVAVLTSRNEVY 579
S V+ +G YG G + D + + +L+ + + ++ G L + N++Y
Sbjct: 279 ENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKKINQLCGGQSFTVCLLNNNDLY 338
Query: 580 TWGKGANGRLGHGDVEDRKTPALVEALKDRH--VKYIACGSNY 620
WG LG +D +P ++ K + VK I CG+++
Sbjct: 339 IWGN--REILGMEYDDDAYSPLELDFFKKNNYTVKNITCGTDH 379
Score = 102 (41.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 280 NVVLDVHHIACGVRHAALVTRQGEVFTWG-EESG--GRLGHGVG-KDIVQPHLLESLTMT 335
N+ D+ + CG H + T +++++G + G GR + G KD+ L + T
Sbjct: 36 NLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFP 95
Query: 336 S-VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLG 370
S + +TCG+ HT + G++Y G G+LG
Sbjct: 96 SKIKKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 82 (33.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/89 (26%), Positives = 40/89 (44%)
Query: 499 VPALIDYNFHKVACGHSLTVGLTTSGHVFTMGST-VYGQLGNPNADGKLPCLVEDKLAGE 557
+ L +++ G S TV L + ++ G+ + G + +A L L K
Sbjct: 310 IQELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYSPLE-LDFFKKNNY 368
Query: 558 SVEEIACGAYHVAVLTSRNEVYTWGKGAN 586
+V+ I CG H VLT +++ WG G N
Sbjct: 369 TVKNITCGTDHCLVLTDNGKLFGWGTGGN 397
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 392 VASVTCGPWHTALITSTGQLFTFGDGTFGVLGH----GDRKNVSY-PREVESLSGLRTIA 446
+ V CG HT + T+ +L++FG GVLG K++ + P + +
Sbjct: 41 IDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSKIKK 100
Query: 447 VACGVWHTAAVVE---VIVTQSSASVSSGKLFTWGDGDKNRL 485
+ CG HTA ++E V +T G L G+KN L
Sbjct: 101 ITCGDNHTAILLENGKVYITGGFRDYC-GVLGLPSFGEKNEL 141
>UNIPROTKB|H9KZT3 [details] [associations]
symbol:Gga.53772 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
GeneTree:ENSGT00550000074558 EMBL:AADN02025204
Ensembl:ENSGALT00000018570 OMA:HAQCSSL Uniprot:H9KZT3
Length = 332
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 627 HKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 686
H W+ E C C + F +R++H+C NCG + C++CSS + AL P KP RVC
Sbjct: 261 HTWLKDDEATHCKQCEKEFSISRRKHHCRNCGDIFCNACSSNEL---ALPSYP-KPVRVC 316
Query: 687 DCCFAKL 693
D C L
Sbjct: 317 DTCHTLL 323
>WB|WBGene00014019 [details] [associations]
symbol:ZK632.12 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS]
Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849 Pfam:PF01363
PROSITE:PS50003 SMART:SM00064 SMART:SM00233 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 EMBL:Z22181 GO:GO:0032266
GeneTree:ENSGT00680000099588 eggNOG:NOG308864 HOGENOM:HOG000231519
OMA:INKCVSD PIR:D88567 PIR:S40944 RefSeq:NP_499183.1
ProteinModelPortal:P34657 SMR:P34657 DIP:DIP-26764N IntAct:P34657
MINT:MINT-1042247 STRING:P34657 PaxDb:P34657
EnsemblMetazoa:ZK632.12.1 EnsemblMetazoa:ZK632.12.2 GeneID:176397
KEGG:cel:CELE_ZK632.12 UCSC:ZK632.12 CTD:176397 WormBase:ZK632.12
InParanoid:P34657 NextBio:892398 Uniprot:P34657
Length = 266
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 38/119 (31%), Positives = 56/119 (47%)
Query: 617 GSNYSAAICLHKWVSSAEQLQCSAC-RQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAAL 675
G+ +A WV E ++C C + F ++RH+C NCG V C +CSSR R
Sbjct: 137 GNKQAATAHAAVWVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACSSR-TFRIDN 195
Query: 676 APNPGKPYRVCDCCFAKLNKVSEASNRRNSLPRLSGE--NKDRLDKSDLKLSKSAMPSN 732
KP RVCD CF L+ S + S P+ ++D S+ +++ S SN
Sbjct: 196 VHK--KPVRVCDHCFDSLS--SATPGQEESEPKTGNRLHHEDSSSDSEDEVNGSGRSSN 250
>UNIPROTKB|P34657 [details] [associations]
symbol:ZK632.12 "Uncharacterized protein ZK632.12"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849
Pfam:PF01363 PROSITE:PS50003 SMART:SM00064 SMART:SM00233
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:Z22181
GO:GO:0032266 GeneTree:ENSGT00680000099588 eggNOG:NOG308864
HOGENOM:HOG000231519 OMA:INKCVSD PIR:D88567 PIR:S40944
RefSeq:NP_499183.1 ProteinModelPortal:P34657 SMR:P34657
DIP:DIP-26764N IntAct:P34657 MINT:MINT-1042247 STRING:P34657
PaxDb:P34657 EnsemblMetazoa:ZK632.12.1 EnsemblMetazoa:ZK632.12.2
GeneID:176397 KEGG:cel:CELE_ZK632.12 UCSC:ZK632.12 CTD:176397
WormBase:ZK632.12 InParanoid:P34657 NextBio:892398 Uniprot:P34657
Length = 266
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 38/119 (31%), Positives = 56/119 (47%)
Query: 617 GSNYSAAICLHKWVSSAEQLQCSAC-RQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAAL 675
G+ +A WV E ++C C + F ++RH+C NCG V C +CSSR R
Sbjct: 137 GNKQAATAHAAVWVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACSSR-TFRIDN 195
Query: 676 APNPGKPYRVCDCCFAKLNKVSEASNRRNSLPRLSGE--NKDRLDKSDLKLSKSAMPSN 732
KP RVCD CF L+ S + S P+ ++D S+ +++ S SN
Sbjct: 196 VHK--KPVRVCDHCFDSLS--SATPGQEESEPKTGNRLHHEDSSSDSEDEVNGSGRSSN 250
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 129 (50.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 50/195 (25%), Positives = 82/195 (42%)
Query: 248 VICDNVVKAGADKNVNYLGTRADVLLPRPL---ESNVVLDVHHIACGVRHAALVTRQGEV 304
+I D V+ G + + + G R PR + E + + +A GV H+A++T +GEV
Sbjct: 149 IIGDRVLSCGEGEALGHPG-RTTTKKPRKVDIFEEEGLKPLQAVAGGV-HSAVLTSEGEV 206
Query: 305 FTWG-EESGGRLGHGVGKD-----IVQPHLLESLTMTS-VDFVTCGEFHTCAVTMAGELY 357
+ G E G GV K+ + E + + + G T A+T G +
Sbjct: 207 YMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVI 266
Query: 358 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-----QVASVTCGPWHTALITSTGQLF 412
WG+ ++ G DV + K P+ + ++ + G H ++ G L
Sbjct: 267 AWGNLRNSNG----NVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLL 322
Query: 413 TFGDGTFGVLGHGDR 427
TFGDG G LG R
Sbjct: 323 TFGDGEMGQLGRSSR 337
Score = 73 (30.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 42/156 (26%), Positives = 62/156 (39%)
Query: 479 DGDKNRLGHGDKEPRL-KPTCVPAL-IDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQ 536
+ D + G ++E R+ P PA + F + G V L + G VF MG
Sbjct: 407 EADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIE-GVQHVVILGSDGKVFAMGKNTDNA 465
Query: 537 LGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAV----LTS-----RNEVYTWGKGANG 587
LG N GK + ++++EI + V V TS Y WG G
Sbjct: 466 LGLGNWTGKDD---QQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTG 522
Query: 588 RLGHG-DVEDRKTPALVEALKDRHVK-YIACGSNYS 621
+LG G ED K + E + H+ Y G++ S
Sbjct: 523 QLGLGLKDEDEKMVSKPEEISSAHLDGYSIIGASIS 558
Score = 62 (26.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 47/197 (23%), Positives = 73/197 (37%)
Query: 398 GPWHTALITSTGQLFTFGDGTFGVLG-HGDRKNVSYP----REVESLSGLRTIAVACGVW 452
G W T + G+ + FG + LG D +V RE+ L A A G
Sbjct: 378 GFW-TIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVF--LPAEAPAFGAE 434
Query: 453 HTAAVVEVIVTQSSASVSS-GKLFTWGDGDKNRLGHG------DKEPRLKPTCVPALIDY 505
T +E + Q + S GK+F G N LG G D++ L T D
Sbjct: 435 RTFVNIEGV--QHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDS 492
Query: 506 NFHKVACGHSLTVGLTTSGHVFTMGSTVYGQLGN--PNADGKLPCLVED----KLAGESV 559
V+ + ++ + G + G GQLG + D K+ E+ L G S+
Sbjct: 493 KIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYSI 552
Query: 560 EEIACGAYHVAVLTSRN 576
+ H ++ +N
Sbjct: 553 IGASISDQHTLIIAKKN 569
>RGD|1305099 [details] [associations]
symbol:Rufy1 "RUN and FYVE domain containing 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008565 "protein transporter activity" evidence=ISO]
[GO:0015031 "protein transport" evidence=ISO] [GO:0030100
"regulation of endocytosis" evidence=ISO] [GO:0005770 "late
endosome" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 RGD:1305099
GO:GO:0005737 GO:GO:0046872 GO:GO:0008565 GO:GO:0030100
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG270133
HOVERGEN:HBG057053 HOGENOM:HOG000030913 OrthoDB:EOG41NTKP
IPI:IPI00372367 UniGene:Rn.39348 EMBL:BC099227 UCSC:RGD:1305099
InParanoid:Q4FZR3 ArrayExpress:Q4FZR3 Genevestigator:Q4FZR3
Uniprot:Q4FZR3
Length = 394
Score = 149 (57.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 627 HKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 686
H W+ E C C + F +R++H+C NCG + C++CSS + AL P KP RVC
Sbjct: 323 HTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNEL---ALPSYP-KPVRVC 378
Query: 687 DCCFAKL 693
D C L
Sbjct: 379 DSCHTLL 385
>UNIPROTKB|J9P2D7 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
GeneTree:ENSGT00700000104373 EMBL:AAEX03009934 EMBL:AAEX03009935
Ensembl:ENSCAFT00000044773 Uniprot:J9P2D7
Length = 1364
Score = 151 (58.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 28/66 (42%), Positives = 35/66 (53%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
KW E C AC + F T +RH+C CG + C CS++ AL P+ KP RVCD
Sbjct: 1301 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNAL----TPSSKKPVRVCD 1356
Query: 688 CCFAKL 693
CF L
Sbjct: 1357 ACFNDL 1362
>UNIPROTKB|F1PZD3 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769 GO:GO:0006906
OMA:LKEQCKT GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:AAEX03009934 EMBL:AAEX03009935 Ensembl:ENSCAFT00000009971
Uniprot:F1PZD3
Length = 1411
Score = 151 (58.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/66 (42%), Positives = 35/66 (53%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
KW E C AC + F T +RH+C CG + C CS++ AL P+ KP RVCD
Sbjct: 1348 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNAL----TPSSKKPVRVCD 1403
Query: 688 CCFAKL 693
CF L
Sbjct: 1404 ACFNDL 1409
>UNIPROTKB|Q15075 [details] [associations]
symbol:EEA1 "Early endosome antigen 1" species:9606 "Homo
sapiens" [GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0019897
"extrinsic to plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045022 "early endosome to late endosome transport"
evidence=NAS] [GO:0030742 "GTP-dependent protein binding"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=TAS] [GO:0005545
"1-phosphatidylinositol binding" evidence=IDA] [GO:0005516
"calmodulin binding" evidence=NAS] [GO:0016189 "synaptic vesicle to
endosome fusion" evidence=TAS] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0006906 "vesicle
fusion" evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0016020 "membrane" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0042803 GO:GO:0031901
GO:GO:0046872 GO:GO:0005545 GO:GO:0008270 GO:GO:0019897
GO:GO:0005516 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG12793 GO:GO:0045022 GO:GO:0005769
GO:GO:0030742 GO:GO:0006906 EMBL:L40157 EMBL:X78998 EMBL:AC016136
EMBL:AC021646 EMBL:AC026111 IPI:IPI00329536 PIR:A57013
RefSeq:NP_003557.2 UniGene:Hs.567367 PDB:1HYI PDB:1HYJ PDB:1JOC
PDB:3MJH PDBsum:1HYI PDBsum:1HYJ PDBsum:1JOC PDBsum:3MJH
ProteinModelPortal:Q15075 SMR:Q15075 IntAct:Q15075
MINT:MINT-5004646 STRING:Q15075 PhosphoSite:Q15075 DMDM:229462866
PaxDb:Q15075 PRIDE:Q15075 DNASU:8411 Ensembl:ENST00000322349
GeneID:8411 KEGG:hsa:8411 UCSC:uc001tck.3 CTD:8411
GeneCards:GC12M093102 HGNC:HGNC:3185 HPA:CAB005861 HPA:CAB018782
HPA:HPA038158 HPA:HPA038159 MIM:605070 neXtProt:NX_Q15075
PharmGKB:PA27621 HOGENOM:HOG000112329 HOVERGEN:HBG039440
InParanoid:Q15075 KO:K12478 OMA:LKEQCKT OrthoDB:EOG4MSCXG
ChiTaRS:EEA1 EvolutionaryTrace:Q15075 GenomeRNAi:8411 NextBio:31490
PMAP-CutDB:Q15075 ArrayExpress:Q15075 Bgee:Q15075 CleanEx:HS_EEA1
Genevestigator:Q15075 GermOnline:ENSG00000102189 GO:GO:0005969
GO:GO:0016189 Uniprot:Q15075
Length = 1411
Score = 151 (58.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/66 (42%), Positives = 35/66 (53%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
KW E C AC + F T +RH+C CG + C CS++ AL P+ KP RVCD
Sbjct: 1348 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNAL----TPSSKKPVRVCD 1403
Query: 688 CCFAKL 693
CF L
Sbjct: 1404 ACFNDL 1409
>MGI|MGI:2442192 [details] [associations]
symbol:Eea1 "early endosome antigen 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005545
"1-phosphatidylinositol binding" evidence=ISO] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005769 "early endosome"
evidence=ISO;ISA;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IDA] [GO:0006897 "endocytosis" evidence=ISO] [GO:0006906
"vesicle fusion" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019897
"extrinsic to plasma membrane" evidence=ISO] [GO:0030742
"GTP-dependent protein binding" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=ISO] InterPro:IPR000306 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00064 SMART:SM00355 MGI:MGI:2442192 GO:GO:0005829
GO:GO:0031901 GO:GO:0046872 GO:GO:0005545 GO:GO:0008270
GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG12793 GO:GO:0005769 GO:GO:0006906
CTD:8411 HOGENOM:HOG000112329 HOVERGEN:HBG039440 KO:K12478
OMA:LKEQCKT OrthoDB:EOG4MSCXG GO:GO:0005969 EMBL:BC075637
EMBL:AK046231 IPI:IPI00453776 RefSeq:NP_001001932.1
UniGene:Mm.210035 UniGene:Mm.490373 ProteinModelPortal:Q8BL66
SMR:Q8BL66 IntAct:Q8BL66 STRING:Q8BL66 PhosphoSite:Q8BL66
REPRODUCTION-2DPAGE:IPI00453776 PaxDb:Q8BL66 PRIDE:Q8BL66
Ensembl:ENSMUST00000053484 GeneID:216238 KEGG:mmu:216238
UCSC:uc007gwu.1 GeneTree:ENSGT00700000104373 InParanoid:Q8BL66
NextBio:375093 Bgee:Q8BL66 CleanEx:MM_EEA1 Genevestigator:Q8BL66
GermOnline:ENSMUSG00000036499 Uniprot:Q8BL66
Length = 1411
Score = 151 (58.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 39/112 (34%), Positives = 54/112 (48%)
Query: 590 GHGDVEDRKTPAL-VEALKDRHVKYIA-CG-SNYSAAI----CLH-KWVSSAEQLQCSAC 641
G G++E +T AL ++ D + G N S I L+ KW E C +C
Sbjct: 1302 GEGEIEKLQTKALELQRKLDNTTAAVQELGRENQSLQIKHTQALNRKWAEDNEVQNCMSC 1361
Query: 642 RQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDCCFAKL 693
+ F T +RH+C CG + C CS++ AL P+ KP RVCD CF L
Sbjct: 1362 GKCFSVTVRRHHCRQCGNIFCAECSTKNAL----TPSSKKPVRVCDACFNDL 1409
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 151 (58.2 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + + GSN+
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 964
Query: 621 SAAICL 626
+AA+ +
Sbjct: 965 TAALLM 970
Score = 148 (57.2 bits), Expect = 4.8e-06, Sum P(5) = 4.8e-06
Identities = 46/130 (35%), Positives = 62/130 (47%)
Query: 416 DGTFGVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
DG+ G G D ++ YP V LR + V+CG H+ ++E +G
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME-----------NGD 922
Query: 474 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
++T+G G +LGHGD R PT V AL + +V G + T L G VFT GS
Sbjct: 923 VYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAALLMDGQVFTFGSFS 981
Query: 534 YGQLGNPNAD 543
GQLG P D
Sbjct: 982 KGQLGRPILD 991
Score = 125 (49.1 bits), Expect = 0.00080, Sum P(5) = 0.00080
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 481 DKNRLG---HGDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
DK++ G G+K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 871 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + + G+ H A L +V+T+G + G+LG
Sbjct: 931 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQ-VTAGSNHTAALLMDGQVFTFGSFSKGQLG 986
Score = 85 (35.0 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 34/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTS---VDFVTCGEFHTCA 349
HA LV G +F G S G G + +P+ + + V + C +
Sbjct: 555 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 614
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 615 ISKDGELYMFGKDAIYS--------DSSSLVTD-----LKGHFVTQVAMGKAHTCVLMKN 661
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 662 GEVWTFGVNNKGQCG 676
Score = 77 (32.2 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 277 LESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS 336
+E +V+ + AC ++++++ GE++ +G+++ + D L+ L
Sbjct: 597 MEGKIVV---YTACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVTDLKGHF 644
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
V V G+ HTC + GE++T+G +N G G T
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFG--VNNKGQCGRDT 679
Score = 64 (27.6 bits), Expect = 0.00023, Sum P(5) = 0.00023
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG 320
V +A G H ++ + GEV+T+G + G+ G G
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 680
Score = 46 (21.3 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 697 SEASNRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVDL-------IK-QLDCKAAKQGK 748
S R+S P+ +R S +S+ P + +L +K +LD ++
Sbjct: 2774 SPGPGSRSSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLD--PPRERS 2831
Query: 749 KADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKP 785
K+D+++L P L+ K + LT R T+PKP
Sbjct: 2832 KSDSYTL-----DPDTLRKKKMPLTEPLRGRSTSPKP 2863
Score = 45 (20.9 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P +I N+ +RS+ + K++
Sbjct: 248 VASWGETGRTLQAISAILTNNGSHACQTIQVP--------MILNSLQRSVQAVLVGKIQI 299
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 300 QDWFSNGIK 308
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(5) = 2.4e-06
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 905 PGVYD-PE-NMRPAYIPNGLETNGVHYSDM 932
P V++ PE NM+ +P LET+ + +D+
Sbjct: 3402 PNVFEEPESNMKS--MPPSLETSPITDTDL 3429
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 271 VLLPR-PLESNVVLDVHHIACGVRHAALVTRQGE 303
V++P L SN +I C VRH L ++ E
Sbjct: 96 VIIPDIKLHSNP--SAFNIYCNVRHCVLEWQKKE 127
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 683 YRVCDCCFAKLNKVSEASNR 702
Y VCD C K + +A+ R
Sbjct: 3259 YLVCDRCREKYLREKQAAAR 3278
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 745 KQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKPI 786
K KK++ + V + Q P LL +A+ ++ T +P+
Sbjct: 1325 KSSKKSNNGTDVNAGQIPQLLYRLPTSDGSASKGKQQTSEPV 1366
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 149 (57.5 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + AC SN+
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAC-SNH 964
Query: 621 SAAICL 626
+A + +
Sbjct: 965 TAVLLM 970
Score = 148 (57.2 bits), Expect = 3.3e-06, Sum P(5) = 3.3e-06
Identities = 46/130 (35%), Positives = 61/130 (46%)
Query: 416 DGTFGVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
DG+ G G D ++ YP V LR + V+CG H+ ++E +G
Sbjct: 875 DGS-GDRGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME-----------NGD 922
Query: 474 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
++T+G G +LGHGD R PT V AL + AC + V L G VFT GS
Sbjct: 923 VYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACSNHTAV-LLMDGQVFTFGSFS 981
Query: 534 YGQLGNPNAD 543
GQLG P D
Sbjct: 982 KGQLGRPILD 991
Score = 133 (51.9 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
Identities = 39/118 (33%), Positives = 63/118 (53%)
Query: 481 DKNRLGHGD---KEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
DK++ G GD K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 871 DKHKDGSGDRGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + AC + H AVL +V+T+G + G+LG
Sbjct: 931 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQVTAC-SNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 87 (35.7 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 35/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTS---VDFVTCGEFHTCA 349
HA LV G VF G S G G + +P+ + + V + C +
Sbjct: 555 HALLVAEDGSVFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 614
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 615 ISKDGELYMFGKDAIYS--------DSSSLV-----SDLKGHFVTQVAMGKAHTCVLMKN 661
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 662 GEVWTFGVNNKGQCG 676
Score = 78 (32.5 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 277 LESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS 336
+E +V+ + AC ++++++ GE++ +G+++ + D L+ L
Sbjct: 597 MEGKIVV---YTACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVSDLKGHF 644
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
V V G+ HTC + GE++T+G +N G G T
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFG--VNNKGQCGRDT 679
Score = 64 (27.6 bits), Expect = 0.00038, Sum P(5) = 0.00038
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG 320
V +A G H ++ + GEV+T+G + G+ G G
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 680
Score = 48 (22.0 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 23/95 (24%), Positives = 40/95 (42%)
Query: 697 SEASNRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVDLIKQLDCKAA------KQGKKA 750
S R+S P+ R S +S+ P + +L ++ A ++ K+
Sbjct: 2846 SPGPGSRSSSPKPKPLPTPRSSPSGASSPRSSSPQDKNLPQKSTAPAKTKLDPPRERSKS 2905
Query: 751 DAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKP 785
D+++L P L+ K + LT R T+PKP
Sbjct: 2906 DSYTL-----DPDTLRKKKMPLTEPLRGRSTSPKP 2935
Score = 43 (20.2 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P I N+ +RS+ + K++
Sbjct: 248 VASWGETGRTLQAISAILTNNGSHACQTIQVPT--------ILNSLQRSVQAVLVGKIQV 299
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 300 QDWFSNGIK 308
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 905 PGVYD-PE-NMRPAYIPNGLETNGVHYSDM 932
P V++ PE NM+ +P LET+ + +D+
Sbjct: 3474 PNVFEEPESNMKS--MPPSLETSPITDTDL 3501
Score = 37 (18.1 bits), Expect = 9.8e-06, Sum P(5) = 9.8e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 271 VLLPR-PLESNVVLDVHHIACGVRHAALVTRQGE 303
V++P L SN +I C VRH L ++ E
Sbjct: 96 VIIPDIKLHSNP--SAFNIYCNVRHCVLEWQKKE 127
Score = 37 (18.1 bits), Expect = 2.9e-05, Sum P(5) = 2.9e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 683 YRVCDCCFAKLNKVSEASNR 702
Y VCD C K + +A+ R
Sbjct: 3331 YLVCDRCREKYLREKQAAAR 3350
>UNIPROTKB|F1SQ11 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769 GO:GO:0006906
OMA:LKEQCKT GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:CU457729 EMBL:FP102822 Ensembl:ENSSSCT00000000996
Uniprot:F1SQ11
Length = 1411
Score = 150 (57.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/66 (42%), Positives = 35/66 (53%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
KW E C AC + F T +RH+C CG + C CS++ AL P+ KP RVCD
Sbjct: 1348 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNAL----TPSSKKPVRVCD 1403
Query: 688 CCFAKL 693
CF L
Sbjct: 1404 SCFNDL 1409
>TAIR|locus:2046997 [details] [associations]
symbol:AT2G21030 "AT2G21030" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 IPI:IPI00938796 RefSeq:NP_179699.4
UniGene:At.52852 EnsemblPlants:AT2G21030.1 GeneID:816637
KEGG:ath:AT2G21030 OMA:SHITFAS ArrayExpress:F4IFN0
InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514 Uniprot:F4IFN0
Length = 158
Score = 120 (47.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 1046 YITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVRGLDKSS 1098
+IT +L G DLKR+RFSR + + QA+ W EN +K+ E YNV+ ++ +
Sbjct: 13 HITFASLPTGGNDLKRIRFSREMYNKWQAQRRWGENYDKIVELYNVQRFNRQA 65
>RGD|1310167 [details] [associations]
symbol:Eea1 "early endosome antigen 1" species:10116 "Rattus
norvegicus" [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA;ISO]
[GO:0006897 "endocytosis" evidence=IEA;ISO] [GO:0006906 "vesicle
fusion" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA;ISO] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0055037 "recycling endosome" evidence=IDA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 RGD:1310167 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 GO:GO:0055037
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769
GO:GO:0006906 OMA:LKEQCKT GO:GO:0005969
GeneTree:ENSGT00700000104373 IPI:IPI00768104 PRIDE:F1LUA1
Ensembl:ENSRNOT00000029764 ArrayExpress:F1LUA1 Uniprot:F1LUA1
Length = 1411
Score = 148 (57.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
KW E C +C + F T +RH+C CG + C CS++ AL P+ KP RVCD
Sbjct: 1348 KWAEDNEVQNCMSCGKCFSVTVRRHHCRQCGNIFCAECSAKNAL----TPSSKKPVRVCD 1403
Query: 688 CCFAKL 693
CF L
Sbjct: 1404 ACFNDL 1409
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 147 (56.8 bits), Expect = 5.0e-06, Sum P(5) = 5.0e-06
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + + GSN+
Sbjct: 819 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 877
Query: 621 SAAICL 626
+A + +
Sbjct: 878 TAVLLM 883
Score = 145 (56.1 bits), Expect = 7.9e-06, Sum P(5) = 7.9e-06
Identities = 46/130 (35%), Positives = 62/130 (47%)
Query: 416 DGTFGVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
DG+ G G D ++ YP V LR + V+CG H+ ++E +G
Sbjct: 788 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME-----------NGD 835
Query: 474 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
++T+G G +LGHGD R PT V AL + +V G + T L G VFT GS
Sbjct: 836 VYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMDGQVFTFGSFS 894
Query: 534 YGQLGNPNAD 543
GQLG P D
Sbjct: 895 KGQLGRPILD 904
Score = 129 (50.5 bits), Expect = 0.00028, Sum P(5) = 0.00028
Identities = 37/118 (31%), Positives = 63/118 (53%)
Query: 481 DKNRLG---HGDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
DK++ G G+K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 784 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 843
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + + G+ H AVL +V+T+G + G+LG
Sbjct: 844 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 899
Score = 85 (35.0 bits), Expect = 5.0e-06, Sum P(5) = 5.0e-06
Identities = 34/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTS---VDFVTCGEFHTCA 349
HA LV G +F G S G G + +P+ + + V + C +
Sbjct: 468 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 527
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 528 ISKDGELYMFGKDAIYS--------DSSSLVTD-----LKGHFVTQVAMGKAHTCVLMKN 574
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 575 GEVWTFGVNNKGQCG 589
Score = 77 (32.2 bits), Expect = 2.8e-05, Sum P(5) = 2.8e-05
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 277 LESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS 336
+E +V+ + AC ++++++ GE++ +G+++ + D L+ L
Sbjct: 510 MEGKIVV---YTACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVTDLKGHF 557
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
V V G+ HTC + GE++T+G +N G G T
Sbjct: 558 VTQVAMGKAHTCVLMKNGEVWTFG--VNNKGQCGRDT 592
Score = 64 (27.6 bits), Expect = 0.00045, Sum P(5) = 0.00045
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG 320
V +A G H ++ + GEV+T+G + G+ G G
Sbjct: 558 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 593
Score = 46 (21.3 bits), Expect = 5.0e-06, Sum P(5) = 5.0e-06
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 710 SGENKDRLDKS-DLKL-SKSAMPSNVDLIKQLDCKAAKQGKKADAFSLVRSSQAPSLLQL 767
SG + R D L KSA P +LD ++ K+D+++L P L+
Sbjct: 2710 SGASSPRSSSPHDKNLPQKSAAPVKT----KLD--PPRERSKSDSYTL-----DPDTLRK 2758
Query: 768 KDVVLTTAADLRRTTPKP 785
K + LT R T+PKP
Sbjct: 2759 KKMPLTEPLRGRSTSPKP 2776
Score = 45 (20.9 bits), Expect = 5.0e-06, Sum P(5) = 5.0e-06
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P +I N+ +RS+ + K++
Sbjct: 161 VASWGETGRTLQAISAILTNNGSHACQTIQVP--------MILNSLQRSVQAVLVGKIQI 212
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 213 QDWFSNGIK 221
Score = 37 (18.1 bits), Expect = 5.0e-06, Sum P(5) = 5.0e-06
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 905 PGVYD-PE-NMRPAYIPNGLETNGVHYSDM 932
P V++ PE NM+ +P LET+ + +D+
Sbjct: 3315 PNVFEEPESNMKS--MPPSLETSPITDTDL 3342
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(5) = 2.8e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 271 VLLPR-PLESNVVLDVHHIACGVRHAALVTRQGE 303
V++P L SN +I C VRH L ++ E
Sbjct: 9 VIIPDIKLHSNP--SAFNIYCNVRHCVLEWQKKE 40
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(5) = 3.5e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 683 YRVCDCCFAKLNKVSEASNR 702
Y VCD C K + +A+ R
Sbjct: 3172 YLVCDRCREKYLREKQAAAR 3191
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(5) = 3.5e-05
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 745 KQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKPI 786
K KK++ + V + Q P LL +A+ ++ T +P+
Sbjct: 1238 KSSKKSNNGTDVNAGQIPQLLYRLPTSDGSASKGKQQTSEPV 1279
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 73/269 (27%), Positives = 115/269 (42%)
Query: 284 DVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV-GKDIV-----QPHL-LESLTMTS 336
++ I+ G H+ + T G VF G+ + G+ G D V P L L T
Sbjct: 123 EILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEP 181
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVT 396
+ + C + V +G ++++G + G G+ W P ++ G +EG ++ V+
Sbjct: 182 IISIHCSMDTSFVVDSSGAVFSFG--LNEDGQCGNEAYGIQWEPAKVRGDVEGSKIQKVS 239
Query: 397 CGPWHTALITS-TGQLFTFGDGTFG-VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHT 454
G T L S G++F +G +G G D E++ L+ R +A + G
Sbjct: 240 -GSTDTLLACSENGEIFIWGQTEYGQAAGATD--------EIQ-LNTSRHVANSLG---- 285
Query: 455 AAVVEVIVTQSS--ASVSSGKLFTWGDGDKNRLGHGDKEPRLK-PTCVPA-LIDYNF-HK 509
++ V TQSS A S G +F WG G LG G + LK PT + L D
Sbjct: 286 -PIICVDSTQSSVVARNSRGNVFVWGVGV---LGMGPEAESLKTPTQMDQPLFDGKMVTS 341
Query: 510 VACGHSLTVGLTTSGHVFTMGSTVYGQLG 538
V+ G+S + G +F G Y LG
Sbjct: 342 VSAGNSCMSAINEDGRLFIWGENRYSSLG 370
Score = 120 (47.3 bits), Expect = 0.00090, P = 0.00090
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 299 TRQGEVFTWGEESGGRLGHGVGKDI---VQPHLLESLTMTSVDFVTCGEFHTCAVTMAGE 355
+ GE+F WG+ G+ G +I H+ SL + V + A G
Sbjct: 249 SENGEIFIWGQTEYGQAA-GATDEIQLNTSRHVANSLG--PIICVDSTQSSVVARNSRGN 305
Query: 356 LYTWGDGTHNAGLLGHGTDV-SHWIPKRISGPL-EGLQVASVTCGPWHTALITSTGQLFT 413
++ WG G+LG G + S P ++ PL +G V SV+ G + I G+LF
Sbjct: 306 VFVWG-----VGVLGMGPEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFI 360
Query: 414 FGDGTFGVLGHGDRKNVSYPREV 436
+G+ + LG G +K +P ++
Sbjct: 361 WGENRYSSLGLGHQKRQLFPYQL 383
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 146 (56.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/186 (28%), Positives = 84/186 (45%)
Query: 301 QGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWG 360
QG ++ WG++ G K P + ++ F+ G H+ A+T GELY WG
Sbjct: 13 QGVLYCWGDKFSG-------KPTFNP------LIPNICFMDNGYNHSLALTETGELYGWG 59
Query: 361 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGDGTFG 420
D H+ L + S P +I + +V S++CG +A I G L+ +G
Sbjct: 60 DNRHHQ-LSSNKAITSIDKPIKIQ-VIPNQRVKSISCGGNFSAAIMENGLLYVWG----- 112
Query: 421 VLGHGDRKNVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDG 480
L G + S P +V+ L G+ +++ G+ H A V + T SV +TWG
Sbjct: 113 TLIEGGKCTES-PTKVDLLKGVTCVSI--GINHCAVVADSPTTPEKRSV-----YTWGTN 164
Query: 481 DKNRLG 486
K +LG
Sbjct: 165 RKGQLG 170
Score = 132 (51.5 bits), Expect = 0.00020, P = 0.00020
Identities = 41/171 (23%), Positives = 76/171 (44%)
Query: 276 PLESNVVLDVHHIACGVRHAALVT------RQGEVFTWGEESGGRLGHGVGKDIVQPHLL 329
P + +++ V ++ G+ H A+V + V+TWG G+LG VG I
Sbjct: 124 PTKVDLLKGVTCVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGV-VGDSITNAPRR 182
Query: 330 ESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG 389
+L ++ V CGE T A+ E++ WG + + +D IP + P G
Sbjct: 183 VTLGSKAIS-VCCGEEFTAAIVEGNEVFVWGYNKSRQ-ICSNNSDEIISIPVK---PFLG 237
Query: 390 LQVASVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRKNVSYPREVESLS 440
+ ++C + A + G + +G V GD K +++P +++ +S
Sbjct: 238 RDIVELSCTKNYIAARSGVGNVCVWGSNE-QVCRIGDDKFINFPNKIKQIS 287
Score = 129 (50.5 bits), Expect = 0.00042, P = 0.00042
Identities = 58/228 (25%), Positives = 94/228 (41%)
Query: 401 HTALITSTGQLFTFGDGTFGVLGHGDR-KNVSYPREVESLSGLRTIAVACGVWHTAAVVE 459
H+ +T TG+L+ +GD L ++ P +++ + R +++CG +AA++E
Sbjct: 45 HSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIME 104
Query: 460 VIVTQSSASVSSGKLFTWG---DGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKVACGHS 515
+G L+ WG +G K K LK TCV I N H S
Sbjct: 105 -----------NGLLYVWGTLIEGGKCTESP-TKVDLLKGVTCVS--IGIN-HCAVVADS 149
Query: 516 LTVGLTTSGHVFTMGSTVYGQLGNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSR 575
T S V+T G+ GQLG D L +++ + CG A +
Sbjct: 150 PTTPEKRS--VYTWGTNRKGQLGVVG-DSITNAPRRVTLGSKAIS-VCCGEEFTAAIVEG 205
Query: 576 NEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNYSAA 623
NEV+ WG + ++ + D V+ R + ++C NY AA
Sbjct: 206 NEVFVWGYNKSRQICSNN-SDEIISIPVKPFLGRDIVELSCTKNYIAA 252
Score = 126 (49.4 bits), Expect = 0.00089, P = 0.00089
Identities = 51/192 (26%), Positives = 88/192 (45%)
Query: 275 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG-KDIVQPHLLESLT 333
+P + ++ ++ + G H+ +T GE++ WG+ +L I +P ++ +
Sbjct: 26 KPTFNPLIPNICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIP 85
Query: 334 MTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 393
V ++CG + A+ G LY WG T G G T+ P ++ L+G V
Sbjct: 86 NQRVKSISCGGNFSAAIMENGLLYVWG--TLIEG--GKCTES----PTKVD-LLKG--VT 134
Query: 394 SVTCGPWHTALITSTG------QLFTFGDGTFGVLGHGDRKNVSYPREVESLSGLRTIAV 447
V+ G H A++ + ++T+G G LG + PR V +L G + I+V
Sbjct: 135 CVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRV-TL-GSKAISV 192
Query: 448 ACGVWHTAAVVE 459
CG TAA+VE
Sbjct: 193 CCGEEFTAAIVE 204
>UNIPROTKB|F1PBG1 [details] [associations]
symbol:PLCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0004435
"phosphatidylinositol phospholipase C activity" evidence=IEA]
InterPro:IPR000008 InterPro:IPR001192 InterPro:IPR001711
InterPro:IPR001849 InterPro:IPR002048 InterPro:IPR008973
InterPro:IPR011992 InterPro:IPR017946 Pfam:PF00168 Pfam:PF00387
Pfam:PF13499 PRINTS:PR00390 PROSITE:PS50003 PROSITE:PS50008
PROSITE:PS50222 SMART:SM00054 SMART:SM00149 SMART:SM00233
SMART:SM00239 InterPro:IPR000909 Prosite:PS00018 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0035556 GO:GO:0004435
Gene3D:3.20.20.190 SUPFAM:SSF51695 GO:GO:0006629 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0005622
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0004871
PROSITE:PS50007 InterPro:IPR015359 PANTHER:PTHR10336 Pfam:PF09279
Pfam:PF00388 SMART:SM00148 GeneTree:ENSGT00700000104020
EMBL:AAEX03013697 Ensembl:ENSCAFT00000013907 Uniprot:F1PBG1
Length = 1206
Score = 149 (57.5 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 1 MADLVSYGNADRD-IEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGER 59
MADL Y N + +E+ + ++ G Q++K R K F L T L W S
Sbjct: 1 MADLEVYKNLSPEKVERCMSVMQSGTQMIKLKRGTKGLVRLFYLDEHRTRLRWRPSRKSE 60
Query: 60 SLKLA--SVSKIIPGQRTAVFQRYLRPEKD-YLSFSLIYNNGKRSLDLICKDKVEAEVWI 116
K+ S+ K+ G+++ +F R D F++ + N SLDLI + EA WI
Sbjct: 61 KAKILIDSIYKVTEGRQSEIFHRQAEGHFDPSCCFTIYHGNHMESLDLITSNPEEARTWI 120
Query: 117 AGLKALIS 124
GLK L++
Sbjct: 121 TGLKYLMA 128
Score = 49 (22.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 969 LRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDSENGTRPRSPALS 1027
++++ + RD V+R S+ S V +S G S+PL ++ T + +L+
Sbjct: 942 IKDSVSEAARDQDGVLRRTTRSLQERPVSLPVDKSLLGALSLPLSETAKDTEGKENSLA 1000
>FB|FBgn0025381 [details] [associations]
symbol:rush "rush hour" species:7227 "Drosophila
melanogaster" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0006897 "endocytosis" evidence=IGI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0044448 "cell cortex part"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0005770 "late endosome" evidence=IDA] [GO:0007032
"endosome organization" evidence=IMP] [GO:0016324 "apical plasma
membrane" evidence=IDA] Pfam:PF00169 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003 SMART:SM00064
SMART:SM00233 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
GO:GO:0016324 EMBL:AE014298 GO:GO:0006897 GO:GO:0005770
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0008333
GO:GO:0035091 GO:GO:0007032 GO:GO:0005769
GeneTree:ENSGT00680000099588 GO:GO:0044448 HSSP:Q15075
EMBL:AL031027 eggNOG:NOG308864 OMA:INKCVSD EMBL:BT003610
EMBL:BT056254 PIR:T13601 RefSeq:NP_569923.2 UniGene:Dm.7010
SMR:O76902 DIP:DIP-21949N MINT:MINT-767382 STRING:O76902
EnsemblMetazoa:FBtr0070259 GeneID:31105 KEGG:dme:Dmel_CG14782
UCSC:CG14782-RA FlyBase:FBgn0025381 InParanoid:O76902
OrthoDB:EOG4BRV2C GenomeRNAi:31105 NextBio:771964 Uniprot:O76902
Length = 316
Score = 137 (53.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Query: 629 WVSSAEQLQCSACRQA-FGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
WV + C C++ F F ++RH+C NCG V C CS++K L L K RVCD
Sbjct: 149 WVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFL---LPQQSTKALRVCD 205
Query: 688 CCFAKLNKV 696
C+ +L V
Sbjct: 206 ACYERLKHV 214
>MGI|MGI:2683547 [details] [associations]
symbol:Plch1 "phospholipase C, eta 1" species:10090 "Mus
musculus" [GO:0004435 "phosphatidylinositol phospholipase C
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0008081 "phosphoric diester
hydrolase activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=ISA] [GO:0016020 "membrane" evidence=IDA] [GO:0016042
"lipid catabolic process" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=ISA] [GO:0050429 "calcium-dependent phospholipase C
activity" evidence=ISA] InterPro:IPR000008 InterPro:IPR001192
InterPro:IPR001711 InterPro:IPR001849 InterPro:IPR002048
InterPro:IPR008973 InterPro:IPR011992 InterPro:IPR017946
Pfam:PF00168 Pfam:PF00387 Pfam:PF13499 PRINTS:PR00390
PROSITE:PS50003 PROSITE:PS50008 PROSITE:PS50222 SMART:SM00054
SMART:SM00149 SMART:SM00233 SMART:SM00239 InterPro:IPR000909
Prosite:PS00018 MGI:MGI:2683547 GO:GO:0005829 GO:GO:0016020
GO:GO:0016042 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0004435 GO:GO:0031965 Gene3D:3.20.20.190 SUPFAM:SSF51695
GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 GO:GO:0004871
GO:GO:0048015 PROSITE:PS50007 eggNOG:NOG149692 InterPro:IPR015359
PANTHER:PTHR10336 Pfam:PF09279 Pfam:PF00388 SMART:SM00148
BRENDA:3.1.4.11 HSSP:P10688 HOGENOM:HOG000006871
GeneTree:ENSGT00700000104020 CTD:23007 HOVERGEN:HBG095591
OMA:VEHFQRG GO:GO:0050429 EMBL:AY691172 EMBL:AY691173 EMBL:AY691174
EMBL:BC042549 EMBL:BC052372 EMBL:BC055005 EMBL:AK173095
IPI:IPI00229353 IPI:IPI00338999 IPI:IPI00620780 IPI:IPI00622424
IPI:IPI00890304 RefSeq:NP_001171203.1 RefSeq:NP_001171204.1
RefSeq:NP_899014.2 UniGene:Mm.316391 ProteinModelPortal:Q4KWH5
SMR:Q4KWH5 PhosphoSite:Q4KWH5 PaxDb:Q4KWH5 PRIDE:Q4KWH5
Ensembl:ENSMUST00000084105 Ensembl:ENSMUST00000159676
Ensembl:ENSMUST00000162269 GeneID:269437 KEGG:mmu:269437
UCSC:uc008pju.2 UCSC:uc008pjv.2 UCSC:uc008pjw.2 UCSC:uc008pjx.2
UCSC:uc008pjy.2 InParanoid:Q4KWH5 OrthoDB:EOG41RPT8 ChiTaRS:PLCH1
NextBio:392850 Bgee:Q4KWH5 Genevestigator:Q4KWH5 Uniprot:Q4KWH5
Length = 1682
Score = 149 (57.5 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 1 MADLVSYGNADRD-IEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDETSLIWISSSGER 59
MADL Y N + +E+ + ++ G Q++K R K F L T L W S
Sbjct: 1 MADLEVYKNLSPEKVERCMSVMQSGTQMIKLKRGTKGLVRLFYLDEHRTRLRWRPSRKSE 60
Query: 60 SLKLA--SVSKIIPGQRTAVFQRYLRPEKD-YLSFSLIYNNGKRSLDLICKDKVEAEVWI 116
K+ S+ K+ G+++ +F R D F++ + N SLDLI + EA WI
Sbjct: 61 KAKILIDSIYKVTEGRQSEIFHRQAEGNFDPSCCFTIYHGNHMESLDLITSNPEEARTWI 120
Query: 117 AGLKALIS 124
GLK L++
Sbjct: 121 TGLKYLMA 128
Score = 51 (23.0 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 969 LRETTGASGRDDQPVIRLPNGSVGVLANSSCVSESSEGKESMPLQDSENGTRPRSPALS 1027
++++ + RD V+R S+ V S V +S G S+P+ ++ T + L+
Sbjct: 943 IKDSVSEASRDQDGVLRRTTRSLQVRPVSMPVDKSLLGALSLPISEAAKDTDGKENCLA 1001
Score = 50 (22.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 983 VIRLPNGSVGVLAN-SSCVSESSE-GKESMPLQDSENG----TRPRSPALSVSSHQVEAE 1036
V +L + S + N +S E E GK+ Q + G ++P +PAL+V+ H
Sbjct: 1564 VRKLSSRSQSRVRNIASRAKEKQEAGKQKAMAQSTRGGVVLRSKPPAPALAVNRHST-GS 1622
Query: 1037 WIEQY 1041
+I Y
Sbjct: 1623 YIASY 1627
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 147 (56.8 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + + GSN+
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 964
Query: 621 SAAICL 626
+A + +
Sbjct: 965 TAVLVM 970
Score = 140 (54.3 bits), Expect = 4.8e-05, Sum P(5) = 4.8e-05
Identities = 44/126 (34%), Positives = 59/126 (46%)
Query: 420 GVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
G G D V+ YP V +R + V+CG H+ ++E +G ++T+
Sbjct: 878 GERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLME-----------NGDVYTF 926
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
G G +LGHGD R PT V AL + +V G + T L G VFT GS GQL
Sbjct: 927 GYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLVMDGQVFTFGSFSKGQL 985
Query: 538 GNPNAD 543
G P D
Sbjct: 986 GRPILD 991
Score = 131 (51.2 bits), Expect = 0.00036, Sum P(5) = 0.00036
Identities = 37/118 (31%), Positives = 62/118 (52%)
Query: 479 DGDKNRLGH-GDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
D K+ G G+K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 871 DKHKDASGERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + + G+ H AVL +V+T+G + G+LG
Sbjct: 931 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQ-VTAGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 83 (34.3 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 35/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTSVDFVTCGEFH---TCA 349
HA LV G VF G S G G + +P+ + + V C + +
Sbjct: 555 HALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSV 614
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 615 ISKDGELYMFGKDAIYS--------DSSSLV-----SDLKGHFVTQVAMGKAHTCVLMKN 661
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 662 GEVWTFGVNNKGQCG 676
Score = 75 (31.5 bits), Expect = 5.6e-05, Sum P(5) = 5.6e-05
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 289 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTC 348
AC ++++++ GE++ +G+++ + D L+ L V V G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVSDLKGHFVTQVAMGKAHTC 656
Query: 349 AVTMAGELYTWGDGTHNAGLLGHGT 373
+ GE++T+G +N G G T
Sbjct: 657 VLMKNGEVWTFG--VNNKGQCGRDT 679
Score = 64 (27.6 bits), Expect = 0.00058, Sum P(5) = 0.00058
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 285 VHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVG 320
V +A G H ++ + GEV+T+G + G+ G G
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTG 680
Score = 48 (22.0 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 23/95 (24%), Positives = 40/95 (42%)
Query: 697 SEASNRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVDLIKQLDCKAA------KQGKKA 750
S R+S P+ R S +S+ P + +L ++ A ++ K+
Sbjct: 2849 SPGPGSRSSSPKPKTLPTPRSSPSGASSPRSSSPQDKNLPQKSTAPAKTKLDPPRERSKS 2908
Query: 751 DAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKP 785
D+++L P L+ K + LT R T+PKP
Sbjct: 2909 DSYTL-----DPDTLRKKKMPLTEPLRGRSTSPKP 2938
Score = 43 (20.2 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P I N+ +RS+ + K++
Sbjct: 248 VASWGETGRTLQAISAILTNNGSHACQTIQVPT--------ILNSLQRSVQAVLVGKIQV 299
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 300 QDWFSNGIK 308
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 905 PGVYD-PE-NMRPAYIPNGLETNGVHYSDM 932
P V++ PE NM+ +P LET+ + +D+
Sbjct: 3477 PNVFEEPESNMKS--MPPSLETSPITDTDL 3504
Score = 37 (18.1 bits), Expect = 3.7e-05, Sum P(5) = 3.7e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 271 VLLPR-PLESNVVLDVHHIACGVRHAALVTRQGE 303
V++P L SN +I C VRH L ++ E
Sbjct: 96 VIIPDIKLHSNP--SAFNIYCNVRHCVLEWQKKE 127
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 683 YRVCDCCFAKLNKVSEASNR 702
Y VCD C K + +A+ R
Sbjct: 3334 YLVCDRCREKYLREKQAAAR 3353
>UNIPROTKB|F1S429 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000306
Pfam:PF01363 PROSITE:PS50089 SMART:SM00064 GO:GO:0005737
GO:GO:0046872 GO:GO:0008565 GO:GO:0008270 GO:GO:0030100
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
OMA:AITSFEG GeneTree:ENSGT00550000074558 EMBL:CU914196
EMBL:CU915704 Ensembl:ENSSSCT00000015318 Uniprot:F1S429
Length = 718
Score = 150 (57.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 627 HKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 686
H W+ E C C + F +R++H+C NCG + C++CSS + AL P KP RVC
Sbjct: 646 HTWLKDDEATHCKQCEKEFSISRRKHHCRNCGHIFCNTCSSNEL---ALPSYP-KPVRVC 701
Query: 687 DCCFAKL 693
D C L
Sbjct: 702 DSCHTLL 708
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 248 VICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA-LVTRQGEVFT 306
V+ ++ +K G +++G P L + + IA VR+ L T G
Sbjct: 159 VVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRA 218
Query: 307 W 307
W
Sbjct: 219 W 219
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 147 (56.8 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + + GSN+
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 964
Query: 621 SAAICL 626
+A + +
Sbjct: 965 TAVLLM 970
Score = 145 (56.1 bits), Expect = 1.8e-05, Sum P(5) = 1.8e-05
Identities = 46/130 (35%), Positives = 62/130 (47%)
Query: 416 DGTFGVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
DG+ G G D ++ YP V LR + V+CG H+ ++E +G
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME-----------NGD 922
Query: 474 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
++T+G G +LGHGD R PT V AL + +V G + T L G VFT GS
Sbjct: 923 VYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMDGQVFTFGSFS 981
Query: 534 YGQLGNPNAD 543
GQLG P D
Sbjct: 982 KGQLGRPILD 991
Score = 129 (50.5 bits), Expect = 0.00063, Sum P(5) = 0.00063
Identities = 37/118 (31%), Positives = 63/118 (53%)
Query: 481 DKNRLG---HGDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
DK++ G G+K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 871 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + + G+ H AVL +V+T+G + G+LG
Sbjct: 931 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 85 (35.0 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 34/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTS---VDFVTCGEFHTCA 349
HA LV G +F G S G G + +P+ + + V + C +
Sbjct: 555 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 614
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 615 ISKDGELYMFGKDAIYS--------DSSSLVTD-----LKGHFVTQVAMGKAHTCVLMKN 661
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 662 GEVWTFGVNNKGQCG 676
Score = 77 (32.2 bits), Expect = 6.5e-05, Sum P(5) = 6.5e-05
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 277 LESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS 336
+E +V+ + AC ++++++ GE++ +G+++ + D L+ L
Sbjct: 597 MEGKIVV---YTACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVTDLKGHF 644
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
V V G+ HTC + GE++T+G +N G G T
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFG--VNNKGQCGRDT 679
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 697 SEASNRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVDL-------IK-QLDCKAAKQGK 748
S R+S P+ +R S +S+ P + +L +K +LD ++
Sbjct: 2774 SPGPGSRSSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLD--PPRERS 2831
Query: 749 KADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKP 785
K+D+++L P L+ K + LT R T+PKP
Sbjct: 2832 KSDSYTL-----DPDTLRKKKMPLTEPLRGRSTSPKP 2863
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P I N+ +RS+ + K++
Sbjct: 248 VASWGETGRTLQAISAILTNNGSHACQTIQVPT--------ILNSLQRSVQAVLVGKIQI 299
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 300 QDWFSNGIK 308
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(5) = 1.2e-05
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 905 PGVYD-PE-NMRPAYIPNGLETNGVHYSDM 932
P V++ PE NM+ +P LET+ + +D+
Sbjct: 3402 PNVFEEPESNMKS--MPPSLETSPITDTDL 3429
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(5) = 8.0e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 683 YRVCDCCFAKLNKVSEASNR 702
Y VCD C K + +A+ R
Sbjct: 3259 YLVCDRCREKYLREKQAAAR 3278
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(5) = 8.0e-05
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 745 KQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKPI 786
K KK++ + V + Q P LL +A+ ++ T +P+
Sbjct: 1325 KSSKKSNNGTDVNAGQIPQLLYRLPTSDGSASKGKQQTSEPV 1366
>UNIPROTKB|Q96T51 [details] [associations]
symbol:RUFY1 "RUN and FYVE domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0031901
GO:GO:0046872 GO:GO:0008565 GO:GO:0008270 GO:GO:0006897
GO:GO:0030100 GO:GO:0008289 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759 SMART:SM00593
PROSITE:PS50826 EMBL:AF312367 EMBL:AK025904 EMBL:AK075021
EMBL:BC032571 EMBL:AF361055 EMBL:AB209507 IPI:IPI00465429
IPI:IPI00556586 IPI:IPI00744637 RefSeq:NP_001035541.1
RefSeq:NP_001035542.1 RefSeq:NP_079434.3 UniGene:Hs.306769 PDB:2YQM
PDB:2YW8 PDBsum:2YQM PDBsum:2YW8 ProteinModelPortal:Q96T51
SMR:Q96T51 IntAct:Q96T51 STRING:Q96T51 PhosphoSite:Q96T51
DMDM:110282993 PaxDb:Q96T51 PRIDE:Q96T51 DNASU:80230
Ensembl:ENST00000319449 Ensembl:ENST00000377001
Ensembl:ENST00000393438 Ensembl:ENST00000437570 GeneID:80230
KEGG:hsa:80230 UCSC:uc003mka.1 CTD:80230 GeneCards:GC05P178977
HGNC:HGNC:19760 HPA:HPA038804 MIM:610327 neXtProt:NX_Q96T51
PharmGKB:PA134944787 eggNOG:NOG270133 HOVERGEN:HBG057053
InParanoid:Q96T51 KO:K12482 OMA:AITSFEG ChiTaRS:RUFY1
EvolutionaryTrace:Q96T51 GenomeRNAi:80230 NextBio:70661 Bgee:Q96T51
CleanEx:HS_RUFY1 Genevestigator:Q96T51 GermOnline:ENSG00000176783
Uniprot:Q96T51
Length = 708
Score = 149 (57.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 627 HKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 686
H W+ E C C + F +R++H+C NCG + C++CSS + AL P KP RVC
Sbjct: 637 HAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNEL---ALPSYP-KPVRVC 692
Query: 687 DCCFAKL 693
D C L
Sbjct: 693 DSCHTLL 699
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 248 VICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA-LVTRQGEVFT 306
V+ ++ +K G +++G P L + + IA VR+ L T G
Sbjct: 150 VVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRA 209
Query: 307 W 307
W
Sbjct: 210 W 210
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 147 (56.8 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + + GSN+
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 1002
Query: 621 SAAICL 626
+A + +
Sbjct: 1003 TAVLLM 1008
Score = 145 (56.1 bits), Expect = 2.0e-05, Sum P(5) = 2.0e-05
Identities = 46/130 (35%), Positives = 62/130 (47%)
Query: 416 DGTFGVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
DG+ G G D ++ YP V LR + V+CG H+ ++E +G
Sbjct: 913 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME-----------NGD 960
Query: 474 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
++T+G G +LGHGD R PT V AL + +V G + T L G VFT GS
Sbjct: 961 VYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMDGQVFTFGSFS 1019
Query: 534 YGQLGNPNAD 543
GQLG P D
Sbjct: 1020 KGQLGRPILD 1029
Score = 129 (50.5 bits), Expect = 0.00069, Sum P(5) = 0.00069
Identities = 37/118 (31%), Positives = 63/118 (53%)
Query: 481 DKNRLG---HGDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
DK++ G G+K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 909 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 968
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + + G+ H AVL +V+T+G + G+LG
Sbjct: 969 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 85 (35.0 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 34/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTS---VDFVTCGEFHTCA 349
HA LV G +F G S G G + +P+ + + V + C +
Sbjct: 593 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 652
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 653 ISKDGELYMFGKDAIYS--------DSSSLVTD-----LKGHFVTQVAMGKAHTCVLMKN 699
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 700 GEVWTFGVNNKGQCG 714
Score = 77 (32.2 bits), Expect = 7.1e-05, Sum P(5) = 7.1e-05
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 277 LESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS 336
+E +V+ + AC ++++++ GE++ +G+++ + D L+ L
Sbjct: 635 MEGKIVV---YTACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVTDLKGHF 682
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
V V G+ HTC + GE++T+G +N G G T
Sbjct: 683 VTQVAMGKAHTCVLMKNGEVWTFG--VNNKGQCGRDT 717
Score = 46 (21.3 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 697 SEASNRRNSLPRLSGENKDRLDKSDLKLSKSAMPSNVDL-------IK-QLDCKAAKQGK 748
S R+S P+ +R S +S+ P + +L +K +LD ++
Sbjct: 2864 SPGPGSRSSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLD--PPRERS 2921
Query: 749 KADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKP 785
K+D+++L P L+ K + LT R T+PKP
Sbjct: 2922 KSDSYTL-----DPDTLRKKKMPLTEPLRGRSTSPKP 2953
Score = 42 (19.8 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P I N+ +RS+ + K++
Sbjct: 286 VASWGETGRTLQAISAILTNNGSHACQTIQVPT--------ILNSLQRSVQAVLVGKIQI 337
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 338 QDWFSNGIK 346
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 905 PGVYD-PE-NMRPAYIPNGLETNGVHYSDM 932
P V++ PE NM+ +P LET+ + +D+
Sbjct: 3492 PNVFEEPESNMKS--MPPSLETSPITDTDL 3519
Score = 37 (18.1 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 683 YRVCDCCFAKLNKVSEASNR 702
Y VCD C K + +A+ R
Sbjct: 3349 YLVCDRCREKYLREKQAAAR 3368
Score = 37 (18.1 bits), Expect = 8.8e-05, Sum P(5) = 8.8e-05
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 745 KQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKPI 786
K KK++ + V + Q P LL +A+ ++ T +P+
Sbjct: 1363 KSSKKSNNGTDVNAGQIPQLLYRLPTSDGSASKGKQQTSEPV 1404
>UNIPROTKB|F1LR42 [details] [associations]
symbol:Rufy1 "Protein Rufy1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 RGD:1305099 GO:GO:0005737 GO:GO:0046872 GO:GO:0008565
GO:GO:0030100 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759 SMART:SM00593
PROSITE:PS50826 CTD:80230 KO:K12482 OMA:AITSFEG
GeneTree:ENSGT00550000074558 IPI:IPI00372367 RefSeq:NP_001094197.1
UniGene:Rn.39348 PRIDE:F1LR42 Ensembl:ENSRNOT00000004740
GeneID:360521 KEGG:rno:360521 NextBio:673085 ArrayExpress:F1LR42
Uniprot:F1LR42
Length = 711
Score = 149 (57.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 627 HKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 686
H W+ E C C + F +R++H+C NCG + C++CSS + AL P KP RVC
Sbjct: 640 HTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNEL---ALPSYP-KPVRVC 695
Query: 687 DCCFAKL 693
D C L
Sbjct: 696 DSCHTLL 702
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 248 VICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA-LVTRQGEVFT 306
V+ ++ +K G +++G P L + + IA VR+ L T G
Sbjct: 153 VVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRA 212
Query: 307 W 307
W
Sbjct: 213 W 213
Score = 38 (18.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 122 LISSGQGGRSKIDGWNDGGLYLEDSRDLTS 151
L G+ S++ G D LYL+D +DL S
Sbjct: 269 LCLKGEDLDSQV-GVIDFSLYLKDVQDLDS 297
>UNIPROTKB|E1BMQ2 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00550000074558 EMBL:DAAA02061815 IPI:IPI00707080
Ensembl:ENSBTAT00000003382 Uniprot:E1BMQ2
Length = 548
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 629 WVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDC 688
W+ E C C + F ++++H+C NCG + C++CS + L +P KP RVCD
Sbjct: 479 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNEL---PLPSSP-KPVRVCDS 534
Query: 689 CFAKL 693
C A L
Sbjct: 535 CHALL 539
>MGI|MGI:2429762 [details] [associations]
symbol:Rufy1 "RUN and FYVE domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IDA] [GO:0015031 "protein transport"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 MGI:MGI:2429762 GO:GO:0005737 GO:GO:0031901
GO:GO:0046872 GO:GO:0008565 GO:GO:0006897 GO:GO:0030100
GO:GO:0008289 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 EMBL:AL645904 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 CTD:80230 eggNOG:NOG270133
HOVERGEN:HBG057053 KO:K12482 OMA:AITSFEG EMBL:AK046625
EMBL:AK046633 EMBL:AK051178 EMBL:AJ250024 IPI:IPI00222147
RefSeq:NP_766145.1 UniGene:Mm.390400 ProteinModelPortal:Q8BIJ7
SMR:Q8BIJ7 IntAct:Q8BIJ7 STRING:Q8BIJ7 PhosphoSite:Q8BIJ7
PaxDb:Q8BIJ7 PRIDE:Q8BIJ7 DNASU:216724 Ensembl:ENSMUST00000020643
GeneID:216724 KEGG:mmu:216724 UCSC:uc007isn.1
GeneTree:ENSGT00550000074558 HOGENOM:HOG000030913 InParanoid:Q8BIJ7
OrthoDB:EOG41NTKP NextBio:375264 Bgee:Q8BIJ7 CleanEx:MM_RUFY1
Genevestigator:Q8BIJ7 GermOnline:ENSMUSG00000020375 Uniprot:Q8BIJ7
Length = 712
Score = 149 (57.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 627 HKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 686
H W+ E C C + F +R++H+C NCG + C++CSS + AL P KP RVC
Sbjct: 641 HTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNEL---ALPSYP-KPVRVC 696
Query: 687 DCCFAKL 693
D C L
Sbjct: 697 DSCHTLL 703
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 248 VICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA-LVTRQGEVFT 306
V+ ++ +K G +++G P L + + IA VR+ L T G
Sbjct: 154 VVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRA 213
Query: 307 W 307
W
Sbjct: 214 W 214
>UNIPROTKB|F1MEH0 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 GeneTree:ENSGT00550000074558
OMA:GQVWLKD EMBL:DAAA02061815 IPI:IPI00866973
Ensembl:ENSBTAT00000054280 Uniprot:F1MEH0
Length = 550
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 629 WVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDC 688
W+ E C C + F ++++H+C NCG + C++CS + L +P KP RVCD
Sbjct: 481 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNEL---PLPSSP-KPVRVCDS 536
Query: 689 CFAKL 693
C A L
Sbjct: 537 CHALL 541
>WB|WBGene00011696 [details] [associations]
symbol:eea-1 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0030139 "endocytic vesicle" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS;IMP]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 SMART:SM00064 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 GO:GO:0030139
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769
GO:GO:0032266 GeneTree:ENSGT00700000104188 KO:K12478 HSSP:Q15075
EMBL:Z81118 EMBL:AY032860 PIR:T24806 RefSeq:NP_001024127.1
UniGene:Cel.5329 ProteinModelPortal:G5ED80 SMR:G5ED80 PRIDE:G5ED80
EnsemblMetazoa:T10G3.5a GeneID:179832 KEGG:cel:CELE_T10G3.5
CTD:179832 WormBase:T10G3.5a OMA:NSRIEEF NextBio:907044
Uniprot:G5ED80
Length = 1205
Score = 150 (57.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
KW+ AE + C+ C + F T ++H+C CG ++C+ CSS K++R A A NP R C+
Sbjct: 1142 KWLDDAEAINCTECGKVFSLTVRKHHCRVCGKIYCNPCSS-KSVRIASAKNP---VRACN 1197
Query: 688 CCFAKLNK 695
CF K
Sbjct: 1198 TCFTDSQK 1205
Score = 45 (20.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 12/67 (17%), Positives = 32/67 (47%)
Query: 153 SASDSSVSLTRDISSPEV--SVSLNHPISSPTSFQTEGSISVNSERSHVASDNTNMQVKG 210
S D +V T +++ ++ ++S I + ++S+ E+ H+ ++N ++ G
Sbjct: 244 SEDDVNVLRTELVNAQKLMDAISQEKDIEIKEHLNSIRNLSMEREKQHIVNENLEKKI-G 302
Query: 211 SGSDVFR 217
G + +
Sbjct: 303 EGEETVK 309
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 147 (56.8 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + + GSN+
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 964
Query: 621 SAAICL 626
+A + +
Sbjct: 965 TAVLLM 970
Score = 145 (56.1 bits), Expect = 2.2e-05, Sum P(5) = 2.2e-05
Identities = 46/130 (35%), Positives = 62/130 (47%)
Query: 416 DGTFGVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
DG+ G G D ++ YP V LR + V+CG H+ ++E +G
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME-----------NGD 922
Query: 474 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
++T+G G +LGHGD R PT V AL + +V G + T L G VFT GS
Sbjct: 923 VYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMDGQVFTFGSFS 981
Query: 534 YGQLGNPNAD 543
GQLG P D
Sbjct: 982 KGQLGRPILD 991
Score = 129 (50.5 bits), Expect = 0.00078, Sum P(5) = 0.00078
Identities = 37/118 (31%), Positives = 63/118 (53%)
Query: 481 DKNRLG---HGDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
DK++ G G+K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 871 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + + G+ H AVL +V+T+G + G+LG
Sbjct: 931 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 85 (35.0 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 34/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTS---VDFVTCGEFHTCA 349
HA LV G +F G S G G + +P+ + + V + C +
Sbjct: 555 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 614
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 615 ISKDGELYMFGKDAIYS--------DSSSLVTD-----LKGHFVTQVAMGKAHTCVLMKN 661
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 662 GEVWTFGVNNKGQCG 676
Score = 77 (32.2 bits), Expect = 8.0e-05, Sum P(5) = 8.0e-05
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 277 LESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS 336
+E +V+ + AC ++++++ GE++ +G+++ + D L+ L
Sbjct: 597 MEGKIVV---YTACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVTDLKGHF 644
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
V V G+ HTC + GE++T+G +N G G T
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFG--VNNKGQCGRDT 679
Score = 45 (20.9 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 745 KQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKP 785
++ K+D+++L P L+ K + LT R T+PKP
Sbjct: 2828 RERSKSDSYTL-----DPDTLRKKKMPLTEPLRGRSTSPKP 2863
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P I N+ +RS+ + K++
Sbjct: 248 VASWGETGRTLQAISAILTNNGSHACQTIQVPT--------ILNSLQRSVQAVLVGKIQI 299
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 300 QDWFSNGIK 308
Score = 40 (19.1 bits), Expect = 2.2e-05, Sum P(5) = 2.2e-05
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 271 VLLPR-PLESNVVLDVHHIACGVRHAALVTRQGEV 304
V++P L SN +I C VRH L ++ E+
Sbjct: 96 VIIPDIKLHSNP--SAFNIYCNVRHCVLEWQKKEI 128
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 905 PGVYD-PE-NMRPAYIPNGLETNGVHYSDM 932
P V++ PE NM+ +P LET+ + +D+
Sbjct: 3402 PNVFEEPESNMKS--MPPSLETSPITDTDL 3429
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(5) = 8.0e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 683 YRVCDCCFAKLNKVSEASNR 702
Y VCD C K + +A+ R
Sbjct: 3259 YLVCDRCREKYLREKQAAAR 3278
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(5) = 8.0e-05
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 745 KQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKPI 786
K KK++ + V + Q P LL +A+ ++ T +P+
Sbjct: 1325 KSSKKSNNGTDVNAGQIPQLLYRLPTSDGSASKGKQQTSEPV 1366
>DICTYBASE|DDB_G0276133 [details] [associations]
symbol:DDB_G0276133 "RUN and FYVE domain-containing
protein 2" species:44689 "Dictyostelium discoideum" [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000306 InterPro:IPR001849
Pfam:PF01363 PROSITE:PS50003 SMART:SM00064 SMART:SM00233
dictyBase:DDB_G0276133 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 EMBL:AAFI02000014
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG247076
RefSeq:XP_643247.1 ProteinModelPortal:Q75JF7
EnsemblProtists:DDB0169527 GeneID:8620290 KEGG:ddi:DDB_G0276133
InParanoid:Q75JF7 OMA:LWFPDES Uniprot:Q75JF7
Length = 634
Score = 125 (49.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/138 (28%), Positives = 62/138 (44%)
Query: 573 TSRNEVYTWGKGANGRLGHGDVEDRK--TPALVEALKDRHVKYIACGSNYSAAICLHKWV 630
++ N++Y K G G K + +L+ ++K N A W
Sbjct: 505 SNNNDIYN-NKSNGGNTDSGIHHHSKHLSTSLLPFYSQNYIKQSQVSPNGMAL-----WF 558
Query: 631 SSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD-CC 689
CS C F F ++RH+C CGL+ C+SCSS+K R + + RVC+ CC
Sbjct: 559 PDESSNNCSLCSALFTFFKRRHHCRRCGLLFCNSCSSKK--REVKGYS--EKVRVCEECC 614
Query: 690 FA-KLNKVSEASNRRNSL 706
+ L+ + AS + N+L
Sbjct: 615 VSIGLSYTAHAS-KPNTL 631
Score = 64 (27.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 127 QGGRSKIDGWNDGG-LYLEDSRD-LTSNSASDSSVSLTRDISSPEVSVSLNHPISSPTSF 184
Q S I N G + L S L SN+ + SS L S P +S SLN+ +S +
Sbjct: 216 QSSGSSISAGNLGNAINLSQSNGILDSNNNNGSSNILNLSSSRP-LSQSLNNSNNSNFNN 274
Query: 185 QTEGSISVNSERSHVASDNTNMQVKGSGSD 214
S S+NS ++ + N+N+ + S ++
Sbjct: 275 INNSSNSINSS-ININNSNSNLSISTSSAN 303
Score = 46 (21.3 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 16/74 (21%), Positives = 38/74 (51%)
Query: 143 LEDSRDLTSNSASDSSVSLTRDISSPEVSVSLNHPISSPTSFQ-TEGSIS-VNSERSHVA 200
L +S + N+ ++SS S+ I+ + +L+ SS + +I+ +N+ ++++
Sbjct: 264 LNNSNNSNFNNINNSSNSINSSININNSNSNLSISTSSANNNNGINNNINNINNSNNNIS 323
Query: 201 SDNTNMQVKGSGSD 214
+ N N +GS+
Sbjct: 324 TGNLNNSNNFNGSN 337
>UNIPROTKB|F1PXC3 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00550000074558 EMBL:AAEX03002774 EMBL:AAEX03002775
Ensembl:ENSCAFT00000021722 Uniprot:F1PXC3
Length = 606
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 629 WVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDC 688
W+ E C C + F ++++H+C NCG + C++CS + L +P KP RVCD
Sbjct: 537 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNEL---PLPSSP-KPVRVCDS 592
Query: 689 CFAKL 693
C A L
Sbjct: 593 CHALL 597
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 147 (56.8 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 561 EIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVEDRKTPALVEALKDRHVKYIACGSNY 620
+++CG +H VL +VYT+G G +G+LGHGDV R P LV+AL + + GSN+
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 1002
Query: 621 SAAICL 626
+A + +
Sbjct: 1003 TAVLLM 1008
Score = 145 (56.1 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 46/130 (35%), Positives = 62/130 (47%)
Query: 416 DGTFGVLGHGDRKNVS-YPR-EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGK 473
DG+ G G D ++ YP V LR + V+CG H+ ++E +G
Sbjct: 913 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME-----------NGD 960
Query: 474 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTV 533
++T+G G +LGHGD R PT V AL + +V G + T L G VFT GS
Sbjct: 961 VYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMDGQVFTFGSFS 1019
Query: 534 YGQLGNPNAD 543
GQLG P D
Sbjct: 1020 KGQLGRPILD 1029
Score = 129 (50.5 bits), Expect = 0.00081, Sum P(5) = 0.00081
Identities = 37/118 (31%), Positives = 63/118 (53%)
Query: 481 DKNRLG---HGDKEPRLKPTCVPALIDYNFH----KVACGHSLTVGLTTSGHVFTMGSTV 533
DK++ G G+K+ T P + ++ +V+CG +V L +G V+T G
Sbjct: 909 DKHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 968
Query: 534 YGQLGNPNADGK-LPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLG 590
+GQLG+ + + + P LV+ L G S + + G+ H AVL +V+T+G + G+LG
Sbjct: 969 HGQLGHGDVNSRGCPTLVQ-ALPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 85 (35.0 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 34/135 (25%), Positives = 54/135 (40%)
Query: 294 HAALVTRQGEVFTWGEESGGRLGHGV-GKDIVQPHLLESLTMTS---VDFVTCGEFHTCA 349
HA LV G +F G S G G + +P+ + + V + C +
Sbjct: 593 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 652
Query: 350 VTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITST 408
++ GELY +G D ++ D S + L+G V V G HT ++
Sbjct: 653 ISKDGELYMFGKDAIYS--------DSSSLVTD-----LKGHFVTQVAMGKAHTCVLMKN 699
Query: 409 GQLFTFGDGTFGVLG 423
G+++TFG G G
Sbjct: 700 GEVWTFGVNNKGQCG 714
Score = 77 (32.2 bits), Expect = 8.3e-05, Sum P(5) = 8.3e-05
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 277 LESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDIVQPHLLESLTMTS 336
+E +V+ + AC ++++++ GE++ +G+++ + D L+ L
Sbjct: 635 MEGKIVV---YTACNNGSSSVISKDGELYMFGKDA-------IYSD--SSSLVTDLKGHF 682
Query: 337 VDFVTCGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT 373
V V G+ HTC + GE++T+G +N G G T
Sbjct: 683 VTQVAMGKAHTCVLMKNGEVWTFG--VNNKGQCGRDT 717
Score = 45 (20.9 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 745 KQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKP 785
++ K+D+++L P L+ K + LT R T+PKP
Sbjct: 2866 RERSKSDSYTL-----DPDTLRKKKMPLTEPLRGRSTSPKP 2901
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 53 ISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEA 112
++S GE L ++S I+ + Q P I N+ +RS+ + K++
Sbjct: 286 VASWGETGRTLQAISAILTNNGSHACQTIQVPT--------ILNSLQRSVQAVLVGKIQI 337
Query: 113 EVWIA-GLK 120
+ W + G+K
Sbjct: 338 QDWFSNGIK 346
Score = 40 (19.1 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 271 VLLPR-PLESNVVLDVHHIACGVRHAALVTRQGEV 304
V++P L SN +I C VRH L ++ E+
Sbjct: 134 VIIPDIKLHSNP--SAFNIYCNVRHCVLEWQKKEI 166
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 905 PGVYD-PE-NMRPAYIPNGLETNGVHYSDM 932
P V++ PE NM+ +P LET+ + +D+
Sbjct: 3440 PNVFEEPESNMKS--MPPSLETSPITDTDL 3467
Score = 37 (18.1 bits), Expect = 8.3e-05, Sum P(5) = 8.3e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 683 YRVCDCCFAKLNKVSEASNR 702
Y VCD C K + +A+ R
Sbjct: 3297 YLVCDRCREKYLREKQAAAR 3316
Score = 37 (18.1 bits), Expect = 8.3e-05, Sum P(5) = 8.3e-05
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 745 KQGKKADAFSLVRSSQAPSLLQLKDVVLTTAADLRRTTPKPI 786
K KK++ + V + Q P LL +A+ ++ T +P+
Sbjct: 1363 KSSKKSNNGTDVNAGQIPQLLYRLPTSDGSASKGKQQTSEPV 1404
>UNIPROTKB|H0YD93 [details] [associations]
symbol:RUFY2 "RUN and FYVE domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 EMBL:AL136233 EMBL:AC016395
HGNC:HGNC:19761 ChiTaRS:RUFY2 Ensembl:ENST00000466493
Uniprot:H0YD93
Length = 620
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 629 WVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDC 688
W+ E C C + F ++++H+C NCG + C++CS + L +P KP RVCD
Sbjct: 551 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNEL---PLPSSP-KPVRVCDS 606
Query: 689 CFAKL 693
C A L
Sbjct: 607 CHALL 611
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 56/218 (25%), Positives = 97/218 (44%)
Query: 253 VVKAGADKNVNY-LGTRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEES 311
++ G++ N L DV P+ + + ++ I+CG H L+ +++ G+
Sbjct: 2 LLSLGSNGNFQLGLNNDEDVYSPQIVPFDRAIE--KISCGGNHTLLLDEDSQLWACGDNR 59
Query: 312 GGRLGHGVGKDI---VQPHLLESLTMTSVD---FVTCG-EFHTCAVTMAGELYTWGDGTH 364
G+ G+ V + + + P L T S + F+TCG EF + + G+G
Sbjct: 60 KGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRRVCSCGEGL- 118
Query: 365 NAGLLGHGTDVSHWIPKRISGP-LEGLQ-VASVTCGPWHTALITSTGQLFTFGDGTFGVL 422
+G LG G + + I P L+ + + ++ G H +T+ G L+ GDG G L
Sbjct: 119 -SGELGQGNRSNSQGLREIDIPYLDDKEFIIDISAGLRHWICVTNEGNLYGCGDGRKGQL 177
Query: 423 GHGDRKNVSYPREVESLSGLRTI-AVACGVWHTAAVVE 459
G K V+ +V L + AV CGV +A + E
Sbjct: 178 GPVVMKTVN---KVSFLGRIEHAQAVVCGVQFSAVLQE 212
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 68/299 (22%), Positives = 124/299 (41%)
Query: 308 GEESGGRLGHGVGKDIVQPHLLESLTMTSVDFVTCGEFHTCAVTMAGELYTWGDGTHNAG 367
G +LG +D+ P ++ +++ ++CG HT + +L W G + G
Sbjct: 6 GSNGNFQLGLNNDEDVYSPQIVPF--DRAIEKISCGGNHTLLLDEDSQL--WACGDNRKG 61
Query: 368 LLGHGTDVSHWIPK-----RISGPLEGLQVASVTCGPWHTALITSTGQ--LFTFGDGTFG 420
G+ + P RI + + +TCG W ++I + + + G+G G
Sbjct: 62 QCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCG-WEFSVIVHADRRRVCSCGEGLSG 120
Query: 421 VLGHGDRKNVSYPREVES--LSGLRTIA-VACGVWHTAAVVEVIVTQSSASVSSGKLFTW 477
LG G+R N RE++ L I ++ G+ H + VT + G L+
Sbjct: 121 ELGQGNRSNSQGLREIDIPYLDDKEFIIDISAGLRHW-----ICVT------NEGNLYGC 169
Query: 478 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKVACGHSLTVGLTTSGHVFTMGSTVYGQL 537
GDG K +LG + K + + I++ V CG + L +GHV +G G+
Sbjct: 170 GDGRKGQLGPVVMKTVNKVSFL-GRIEHA-QAVVCGVQFSAVLQETGHVIVLG----GEK 223
Query: 538 GNPNADGKLPCLVEDKLAGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDVED 596
N A+ +L+ S+ I+ +++L++ VY +G+ + H D
Sbjct: 224 WNVAAECDAWQANNSELSS-SICSISANWSTLSLLSTEGCVYAFGRCDRAQKAHTKASD 281
>UNIPROTKB|F1PXD5 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00550000074558 OMA:GQVWLKD EMBL:AAEX03002774
EMBL:AAEX03002775 Ensembl:ENSCAFT00000021715 Uniprot:F1PXD5
Length = 641
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 629 WVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDC 688
W+ E C C + F ++++H+C NCG + C++CS + L +P KP RVCD
Sbjct: 572 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNEL---PLPSSP-KPVRVCDS 627
Query: 689 CFAKL 693
C A L
Sbjct: 628 CHALL 632
>UNIPROTKB|Q8WXA3 [details] [associations]
symbol:RUFY2 "RUN and FYVE domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 EMBL:CH471083
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
EMBL:AL136233 EMBL:AC016395 eggNOG:NOG270133 HOVERGEN:HBG057053
HOGENOM:HOG000030913 EMBL:AF461266 EMBL:AK127019 EMBL:BC041092
EMBL:AB040970 EMBL:AF411980 IPI:IPI00217122 IPI:IPI00465048
IPI:IPI00760675 IPI:IPI00973533 RefSeq:NP_001035882.1
RefSeq:NP_060457.4 UniGene:Hs.653144 ProteinModelPortal:Q8WXA3
SMR:Q8WXA3 IntAct:Q8WXA3 STRING:Q8WXA3 PhosphoSite:Q8WXA3
DMDM:110287949 PaxDb:Q8WXA3 PRIDE:Q8WXA3 DNASU:55680
Ensembl:ENST00000265865 Ensembl:ENST00000388768
Ensembl:ENST00000399200 GeneID:55680 KEGG:hsa:55680 UCSC:uc001job.3
UCSC:uc001joc.3 UCSC:uc001jod.1 CTD:55680 GeneCards:GC10M070100
HGNC:HGNC:19761 HPA:HPA039792 MIM:610328 neXtProt:NX_Q8WXA3
PharmGKB:PA134935922 InParanoid:Q8WXA3 OMA:GQVWLKD
OrthoDB:EOG4JT051 ChiTaRS:RUFY2 GenomeRNAi:55680 NextBio:60468
ArrayExpress:Q8WXA3 Bgee:Q8WXA3 CleanEx:HS_RUFY2
Genevestigator:Q8WXA3 GermOnline:ENSG00000204130 Uniprot:Q8WXA3
Length = 655
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 629 WVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDC 688
W+ E C C + F ++++H+C NCG + C++CS + L +P KP RVCD
Sbjct: 586 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNEL---PLPSSP-KPVRVCDS 641
Query: 689 CFAKL 693
C A L
Sbjct: 642 CHALL 646
>UNIPROTKB|F1SUI7 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 GeneTree:ENSGT00550000074558
OMA:GQVWLKD EMBL:CU468421 Ensembl:ENSSSCT00000011206 Uniprot:F1SUI7
Length = 656
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 629 WVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDC 688
W+ E C C + F ++++H+C NCG + C++CS + L +P KP RVCD
Sbjct: 587 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNEL---PLPSSP-KPVRVCDS 642
Query: 689 CFAKL 693
C A L
Sbjct: 643 CHALL 647
>WB|WBGene00003084 [details] [associations]
symbol:lst-2 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:FO081006
GO:GO:0040027 GO:GO:0032266 GeneTree:ENSGT00670000097904 PIR:T33568
RefSeq:NP_508756.2 HSSP:Q15075 ProteinModelPortal:Q9TZD0 SMR:Q9TZD0
STRING:Q9TZD0 PaxDb:Q9TZD0 EnsemblMetazoa:R160.7 GeneID:180712
KEGG:cel:CELE_R160.7 UCSC:R160.7 CTD:180712 WormBase:R160.7
eggNOG:NOG247076 HOGENOM:HOG000113402 InParanoid:Q9TZD0 OMA:LHIITEM
NextBio:910578 ArrayExpress:Q9TZD0 Uniprot:Q9TZD0
Length = 661
Score = 141 (54.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 628 KWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPG--KPYRV 685
+WV + QC+AC F F R+RH+C NCG + CH CS P G + RV
Sbjct: 562 RWVPDEDCEQCTACSMPFNFVRRRHHCRNCGRIFCHKCSCN----TISIPEHGYDRKVRV 617
Query: 686 CDCCFA-KLN 694
C+ C+ +LN
Sbjct: 618 CNLCYVHRLN 627
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 148 DLTSNSAS--DSSVSLTRDISSPEVSVSLNHPISSPTSFQTEGSISVNSERSHVASDNTN 205
D+ S+S S DSSV +D SS S++ + ++SP S E + +E + TN
Sbjct: 327 DMPSDSTSSLDSSV---QDSSSETTSLA-SSALASPHSGSEENVSQIENEEGDDEAIGTN 382
>UNIPROTKB|E1BSW6 [details] [associations]
symbol:PLEKHF1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0010314
"phosphatidylinositol-5-phosphate binding" evidence=IEA]
[GO:0010508 "positive regulation of autophagy" evidence=IEA]
[GO:0016050 "vesicle organization" evidence=IEA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
[GO:0070273 "phosphatidylinositol-4-phosphate binding"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849
Pfam:PF01363 PROSITE:PS50003 SMART:SM00064 SMART:SM00233
GO:GO:0005634 GO:GO:0006917 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 GO:GO:0005768 GO:GO:0010508 GO:GO:0005764
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0072659
GO:GO:0007032 GO:GO:0016050 GO:GO:0032266 GO:GO:0010314
GO:GO:0070273 GeneTree:ENSGT00680000099588 EMBL:AADN02031660
IPI:IPI00590788 Ensembl:ENSGALT00000007124 OMA:KEEEADC
Uniprot:E1BSW6
Length = 249
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/103 (33%), Positives = 48/103 (46%)
Query: 629 WVSSAEQLQCSACRQA-FGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCD 687
W+ C C Q F +RH+C CG V C CS ++ L L+P KP RVC+
Sbjct: 149 WIPDKATDICMRCTQTKFSTLTRRHHCRKCGFVVCGDCSRQRFLMPRLSP---KPLRVCN 205
Query: 688 CCFAKL----NKVSEASNR-----RNSLPRLSGENKDRLDKSD 721
C+ +L K EA + R+++P + D DKSD
Sbjct: 206 LCYRQLLAEQKKEEEADCQQPEQYRSAIPGYEPSSGDDSDKSD 248
>UNIPROTKB|F1P364 [details] [associations]
symbol:RUFY2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 GeneTree:ENSGT00550000074558
OMA:GQVWLKD EMBL:AADN02028014 IPI:IPI00590145
ProteinModelPortal:F1P364 Ensembl:ENSGALT00000006358
ArrayExpress:F1P364 Uniprot:F1P364
Length = 607
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 629 WVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDC 688
W+ E C C + F ++++H+C NCG + C++CS + L +P KP RVCD
Sbjct: 538 WLKDKEATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSDNEL---PLPSSP-KPVRVCDS 593
Query: 689 CFAKL 693
C A L
Sbjct: 594 CHAIL 598
>POMBASE|SPAC19A8.05c [details] [associations]
symbol:sst4 "sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex subunit Sst4" species:4896
"Schizosaccharomyces pombe" [GO:0005628 "prospore membrane"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0006900 "membrane budding" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IGI] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISO]
[GO:0033565 "ESCRT-0 complex" evidence=IPI] [GO:0043130 "ubiquitin
binding" evidence=IMP] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 PomBase:SPAC19A8.05c Pfam:PF02809 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006897 GO:GO:0010008 GO:GO:0005628 HSSP:P40343
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 GO:GO:0043130 GO:GO:0032266
GO:GO:0043328 GO:GO:0006900 GO:GO:0045053 GO:GO:0031321
InterPro:IPR018205 SMART:SM00288 KO:K12182 InterPro:IPR017073
PIRSF:PIRSF036956 GO:GO:0033565 OMA:VRVDDGC OrthoDB:EOG40VZXZ
PIR:T37956 RefSeq:NP_593787.1 ProteinModelPortal:O13821 SMR:O13821
STRING:O13821 EnsemblFungi:SPAC19A8.05c.1 GeneID:2542403
KEGG:spo:SPAC19A8.05c NextBio:20803462 Uniprot:O13821
Length = 610
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 638 CSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDCCFAKLNKVS 697
C CR F FT ++H+C NCG V C+ CSS+ L N +P RVCD C++ K
Sbjct: 176 CLRCRTPFTFTNRKHHCRNCGGVFCNQCSSKTLSLPHLGIN--QPVRVCDSCYSLRTKPK 233
Query: 698 EASNR-RN 704
+ +R RN
Sbjct: 234 GSKSRARN 241
>ZFIN|ZDB-GENE-040426-884 [details] [associations]
symbol:plekhf2 "pleckstrin homology domain
containing, family F (with FYVE domain) member 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] Pfam:PF00169
InterPro:IPR000306 InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 ZFIN:ZDB-GENE-040426-884 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
GeneTree:ENSGT00680000099588 HSSP:Q15075 eggNOG:NOG308864
HOGENOM:HOG000231519 HOVERGEN:HBG059973 CTD:79666 OrthoDB:EOG48GW42
EMBL:BC047820 IPI:IPI00486646 RefSeq:NP_956538.1 UniGene:Dr.82961
ProteinModelPortal:Q7ZUV1 Ensembl:ENSDART00000032389 GeneID:393214
KEGG:dre:393214 InParanoid:Q7ZUV1 OMA:INKCVSD NextBio:20814278
Bgee:Q7ZUV1 Uniprot:Q7ZUV1
Length = 247
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/82 (36%), Positives = 40/82 (48%)
Query: 629 WVSSAEQLQCSACRQAFGFT--RKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 686
WV +E C C Q FT +RH+C CG V C CS +K L L KP RVC
Sbjct: 149 WVPDSEATVCMRC-QKMKFTPVNRRHHCRKCGFVVCGPCSEKKFL---LPSQSSKPVRVC 204
Query: 687 DCCFAKLNKVSEASNRRNSLPR 708
+ C+ +L+ + R +S R
Sbjct: 205 EFCYKQLSTGATLPPRSDSYSR 226
>UNIPROTKB|E1C6V3 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
OMA:AITSFEG GeneTree:ENSGT00550000074558 EMBL:AADN02028603
EMBL:AADN02028604 EMBL:AADN02028605 IPI:IPI00584008
Ensembl:ENSGALT00000009631 Uniprot:E1C6V3
Length = 681
Score = 149 (57.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 627 HKWVSSAEQLQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 686
H W+ E C C + F +R++H+C NCG + C++CSS + AL P KP RVC
Sbjct: 610 HTWLKDDEATHCKQCEKEFSISRRKHHCRNCGDIFCNACSSNEL---ALPSYP-KPVRVC 665
Query: 687 DCCFAKL 693
D C L
Sbjct: 666 DSCHTLL 672
Score = 38 (18.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 13/61 (21%), Positives = 23/61 (37%)
Query: 248 VICDNVVKAGADKNVNYLGTRADVLLPRPLESNVVLDVHHIACGVRHAA-LVTRQGEVFT 306
V+ ++ +K G ++G P L + + IA V++ L T G
Sbjct: 122 VVLEHCLKHGLKAKKTFIGQNKSFFGPLELVEKLCPEASDIATSVKNLPELKTAVGRGRA 181
Query: 307 W 307
W
Sbjct: 182 W 182
>UNIPROTKB|Q5ZLY5 [details] [associations]
symbol:PLEKHF2 "Pleckstrin homology domain-containing
family F member 2" species:9031 "Gallus gallus" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00169 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003 SMART:SM00064
SMART:SM00233 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 HSSP:Q15075 eggNOG:NOG308864 HOGENOM:HOG000231519
HOVERGEN:HBG059973 EMBL:AJ719599 IPI:IPI00591793
RefSeq:NP_001026118.1 UniGene:Gga.8914 ProteinModelPortal:Q5ZLY5
GeneID:420234 KEGG:gga:420234 CTD:79666 InParanoid:Q5ZLY5
OrthoDB:EOG48GW42 NextBio:20823182 Uniprot:Q5ZLY5
Length = 249
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/78 (37%), Positives = 40/78 (51%)
Query: 618 SNYSAAICLHKWVSSAEQLQCSACRQA-FGFTRKRHNCYNCGLVHCHSCSSRKALRAALA 676
SN AA+ WV +E C C++A F +RH+C CG V C CS ++ L L
Sbjct: 142 SNEHAAV----WVPDSEATVCMRCQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFL---LP 194
Query: 677 PNPGKPYRVCDCCFAKLN 694
KP R+CD C+ L+
Sbjct: 195 SQSSKPVRICDSCYDLLS 212
>MGI|MGI:1919051 [details] [associations]
symbol:Plekhf2 "pleckstrin homology domain containing,
family F (with FYVE domain) member 2" species:10090 "Mus musculus"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] Pfam:PF00169 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003 SMART:SM00064
SMART:SM00233 MGI:MGI:1919051 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0030133
GeneTree:ENSGT00680000099588 HSSP:Q15075 eggNOG:NOG308864
HOGENOM:HOG000231519 HOVERGEN:HBG059973 CTD:79666 OrthoDB:EOG48GW42
OMA:INKCVSD EMBL:AK033666 EMBL:AK154634 EMBL:BC016134 EMBL:BC039276
IPI:IPI00127931 RefSeq:NP_780384.1 UniGene:Mm.34351
ProteinModelPortal:Q91WB4 SMR:Q91WB4 PhosphoSite:Q91WB4
PaxDb:Q91WB4 PRIDE:Q91WB4 Ensembl:ENSMUST00000054776 GeneID:71801
KEGG:mmu:71801 InParanoid:Q91WB4 NextBio:334554 Bgee:Q91WB4
Genevestigator:Q91WB4 GermOnline:ENSMUSG00000049969 Uniprot:Q91WB4
Length = 249
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 36/106 (33%), Positives = 49/106 (46%)
Query: 618 SNYSAAICLHKWVSSAEQLQCSACRQA-FGFTRKRHNCYNCGLVHCHSCSSRKALRAALA 676
SN AA+ WV +E C C++A F +RH+C CG V C CS ++ L L
Sbjct: 142 SNEHAAV----WVPDSEATVCMRCQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFL---LP 194
Query: 677 PNPGKPYRVCDCCFAKLNKVSEASNRRNSLPRLSGENKDRL-DKSD 721
KP R+CD C+ L+ A+ + S K L D SD
Sbjct: 195 SQSSKPVRICDFCYDLLSTGDMAACQPTRSDSYSQSLKSPLNDASD 240
>RGD|1312029 [details] [associations]
symbol:Plekhf2 "pleckstrin homology domain containing, family F
(with FYVE domain) member 2" species:10116 "Rattus norvegicus"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0030133
"transport vesicle" evidence=IEA;ISO] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00169 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003 SMART:SM00064
SMART:SM00233 RGD:1312029 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0030133 EMBL:CH473984
GeneTree:ENSGT00680000099588 eggNOG:NOG308864 HOGENOM:HOG000231519
HOVERGEN:HBG059973 CTD:79666 OrthoDB:EOG48GW42 OMA:INKCVSD
EMBL:BC161902 IPI:IPI00358681 RefSeq:NP_001102125.1
UniGene:Rn.11991 Ensembl:ENSRNOT00000037483 GeneID:362484
KEGG:rno:362484 UCSC:RGD:1312029 NextBio:680095
Genevestigator:B1WBV4 Uniprot:B1WBV4
Length = 249
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 36/106 (33%), Positives = 49/106 (46%)
Query: 618 SNYSAAICLHKWVSSAEQLQCSACRQA-FGFTRKRHNCYNCGLVHCHSCSSRKALRAALA 676
SN AA+ WV +E C C++A F +RH+C CG V C CS ++ L L
Sbjct: 142 SNEHAAV----WVPDSEATVCMRCQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFL---LP 194
Query: 677 PNPGKPYRVCDCCFAKLNKVSEASNRRNSLPRLSGENKDRL-DKSD 721
KP R+CD C+ L+ A+ + S K L D SD
Sbjct: 195 SQSSKPVRICDFCYDLLSTGDMAACQPTRSDSYSQSLKSPLNDASD 240
WARNING: HSPs involving 58 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1117 1045 0.00082 123 3 11 22 0.43 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 308
No. of states in DFA: 628 (67 KB)
Total size of DFA: 486 KB (2225 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 91.33u 0.21s 91.54t Elapsed: 00:00:06
Total cpu time: 91.59u 0.22s 91.81t Elapsed: 00:00:06
Start: Sat May 11 00:01:13 2013 End: Sat May 11 00:01:19 2013
WARNINGS ISSUED: 2