Query 001237
Match_columns 1117
No_of_seqs 276 out of 821
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 17:58:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001237.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001237hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uc8a1 c.30.1.6 (A:1-88) Lysi 69.2 4.4 0.00032 34.7 6.6 77 322-418 2-79 (88)
2 d1jhfa1 a.4.5.2 (A:2-72) LexA 53.7 1.7 0.00012 36.0 0.8 36 504-539 21-56 (71)
3 d1ehia1 c.30.1.2 (A:3-134) D-a 52.9 20 0.0015 32.5 8.4 87 320-417 2-122 (132)
4 d1stza1 a.4.5.51 (A:14-100) He 51.4 1.9 0.00014 37.2 0.8 36 504-539 20-56 (87)
5 d1iowa1 c.30.1.2 (A:1-96) D-Al 50.0 29 0.0021 29.8 8.5 78 321-418 4-86 (96)
6 d1l9xa_ c.23.16.1 (A:) gamma-g 48.8 4.5 0.00033 41.6 3.4 62 318-388 2-67 (288)
7 d2bisa1 c.87.1.8 (A:1-437) Gly 41.4 6.3 0.00046 41.2 3.2 35 498-540 2-37 (437)
8 d2fzva1 c.23.5.4 (A:1-233) Put 39.9 19 0.0014 35.8 6.5 65 72-139 30-105 (233)
9 d1o4va_ c.23.8.1 (A:) N5-CAIR 38.8 30 0.0022 32.9 7.3 86 320-421 1-86 (169)
10 d1rtta_ c.23.5.4 (A:) Hypothet 35.6 32 0.0024 32.1 7.1 62 77-139 1-72 (174)
11 d1xg5a_ c.2.1.2 (A:) Putative 33.2 95 0.0069 30.4 10.7 80 78-167 11-95 (257)
12 d1t0ia_ c.23.5.4 (A:) Hypothet 30.3 54 0.004 30.6 7.8 61 77-139 1-90 (185)
13 d1zl0a2 c.23.16.7 (A:3-169) LD 29.6 66 0.0048 30.2 8.1 60 319-388 13-84 (167)
14 d1jyea_ c.93.1.1 (A:) Lac-repr 29.0 27 0.002 34.2 5.5 82 321-417 2-86 (271)
15 d1e4ea1 c.30.1.2 (A:2-131) D-a 28.0 41 0.003 30.1 6.1 36 319-359 2-43 (130)
16 d2dria_ c.93.1.1 (A:) D-ribose 25.6 72 0.0052 30.2 8.0 85 320-419 2-89 (271)
17 d1m1na_ c.92.2.3 (A:) Nitrogen 25.6 76 0.0055 34.4 8.9 106 321-433 144-263 (477)
18 d2iw1a1 c.87.1.8 (A:2-371) Lip 25.6 12 0.00085 37.5 1.8 33 499-540 2-34 (370)
19 d1qh8b_ c.92.2.3 (B:) Nitrogen 25.2 45 0.0033 36.9 6.9 93 321-419 144-251 (519)
20 d2nzug1 c.93.1.1 (G:58-332) Gl 24.8 65 0.0047 30.9 7.4 83 320-419 4-89 (275)
21 d1esza_ c.92.2.1 (A:) Periplas 21.8 1.1E+02 0.0078 29.4 8.5 62 1024-1085 143-207 (260)
22 d1ydea1 c.2.1.2 (A:4-253) Reti 21.1 1.4E+02 0.011 28.9 9.3 80 78-168 7-86 (250)
No 1
>d1uc8a1 c.30.1.6 (A:1-88) Lysine biosynthesis enzyme LysX, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=69.22 E-value=4.4 Score=34.67 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=45.5
Q ss_pred EEEEeeccccccCCChHHHHHHHHHHHcCCcEEEEEcCCCCCchhhhhhhccccC-CCcceeEEEecccccccCCCCCCC
Q 001237 322 IGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVM-KKPMVNSAISLTGFALVGGPARQD 400 (1117)
Q Consensus 322 Vgil~yrs~~~~g~~~~~dalI~aLE~~Gl~vipvf~~gl~~~~~v~~~f~~~~~-~~~~vDaiIn~tgF~L~ggpa~~~ 400 (1117)
||||+-+-- ....-|++++|++|..+..+-...... ..+... .-..+|+||--++= . ..
T Consensus 2 i~ily~~~R------~eEk~L~~a~~~rG~~~~~id~~~~~~-------~l~~~~~~~~~~D~Vi~R~~s---~----~~ 61 (88)
T d1uc8a1 2 LAILYDRIR------PDERMLFERAEALGLPYKKVYVPALPM-------VLGERPKELEGVTVALERCVS---Q----SR 61 (88)
T ss_dssp EEEEESSCC------HHHHHHHHHHHHHTCCEEEEEGGGCCE-------ETTBCCGGGTTCCEEEECCSS---H----HH
T ss_pred EEEEEcccc------HHHHHHHHHHHHCCCeEEEEehhhcEE-------EccCCCCccCCCCEEEEeccc---c----ch
Confidence 566655422 345569999999999999885443321 111000 01237888864310 0 01
Q ss_pred chhHHHHhhhCCCcEEeE
Q 001237 401 HPRAIEALRKLDVPYIVA 418 (1117)
Q Consensus 401 ~~~~~~~L~~LnVPvl~a 418 (1117)
.-.....|+.+|||+++.
T Consensus 62 ~~~v~~~lE~~Gv~v~Ns 79 (88)
T d1uc8a1 62 GLAAARYLTALGIPVVNR 79 (88)
T ss_dssp HHHHHHHHHHTTCCEESC
T ss_pred HHHHHHHHHHCCCcEecc
Confidence 123456899999999975
No 2
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=53.72 E-value=1.7 Score=35.96 Aligned_cols=36 Identities=22% Similarity=0.256 Sum_probs=32.9
Q ss_pred ecCCCCCCCccccCCCChHHHHHHHHHHHHHCCCCC
Q 001237 504 FSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNV 539 (1117)
Q Consensus 504 ~nyPp~~g~iGtAa~LDv~~Sl~~iL~~Lk~~GY~v 539 (1117)
++|||.-..|+.+.++-++.++.+.|++|.+.||=.
T Consensus 21 ~G~~Ps~rei~~~~g~~S~stv~~~l~~Le~kG~I~ 56 (71)
T d1jhfa1 21 TGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIE 56 (71)
T ss_dssp HSSCCCHHHHHHHTTCSSHHHHHHHHHHHHHTTSEE
T ss_pred hCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHCcCee
Confidence 479999999999999999999999999999999954
No 3
>d1ehia1 c.30.1.2 (A:3-134) D-alanine:D-lactate ligase VanA, N-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=52.92 E-value=20 Score=32.47 Aligned_cols=87 Identities=20% Similarity=0.236 Sum_probs=50.3
Q ss_pred CeEEEEeeccccccCCChHH------HHHHHHHHHcC-CcEEEEEcCCC----CCc------------hhhhhhhc----
Q 001237 320 PVIGLILQRSHIVTGDDSHY------VAVIMELEARG-AKVIPIFAGGL----DFA------------GPVERFFV---- 372 (1117)
Q Consensus 320 p~Vgil~yrs~~~~g~~~~~------dalI~aLE~~G-l~vipvf~~gl----~~~------------~~v~~~f~---- 372 (1117)
.+|+|+|-... .+|. ..++++|.+.| .+|+|++...- ... ..+.....
T Consensus 2 k~Iavl~GG~S-----~EheVSl~Sa~~v~~~L~~~~~y~v~~i~i~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (132)
T d1ehia1 2 KRVALIFGGNS-----SEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFMKTVDA 76 (132)
T ss_dssp EEEEEEEECSS-----TTHHHHHHHHHHHHHHHHHHSSEEEEEEEECTTSCBCCHHHHHHHHTTCCHHHHHHHHHTSCCT
T ss_pred CEEEEEeCcCc-----chhHHHHHHHHHHHHhhhccCceeEEEEEEcCCceEEcccchhhhhhccccccccccccccccc
Confidence 36999997532 2333 45788998887 89999997421 000 00111000
Q ss_pred -------cccCCCcceeEEEecccccccCCCCCCCchhHHHHhhhCCCcEEe
Q 001237 373 -------DPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIV 417 (1117)
Q Consensus 373 -------~~~~~~~~vDaiIn~tgF~L~ggpa~~~~~~~~~~L~~LnVPvl~ 417 (1117)
........+|++.+. ..|+.+.|. .-+.+|+.+++||.-
T Consensus 77 ~~~~~~~~~~~~~~~~Dvvf~~-----lHG~~GEDG-~iQglle~~~iPy~G 122 (132)
T d1ehia1 77 SDPLARIHALKSAGDFDIFFPV-----VHGNLGEDG-TLQGLFKLLDKPYVG 122 (132)
T ss_dssp TCTTCTTGGGGTTCCCSEEEEE-----CCSTTTSSS-HHHHHHHHTTCCBSS
T ss_pred cccccchhhhhhccCCCEEEEc-----cCCCCccch-HHHHHHHHcCCCccC
Confidence 001122347877664 455555554 356799999999864
No 4
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=51.35 E-value=1.9 Score=37.17 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=32.2
Q ss_pred ecCCCCCCCccccCCCC-hHHHHHHHHHHHHHCCCCC
Q 001237 504 FSFPPDKGNIGTAAYLN-VFSSIFSVLKDLQRDGYNV 539 (1117)
Q Consensus 504 ~nyPp~~g~iGtAa~LD-v~~Sl~~iL~~Lk~~GY~v 539 (1117)
.++||+-..|....+|+ .++++.+.|.+|.+.||=.
T Consensus 20 ~g~Pv~s~~i~~~~~l~~S~aTIRn~m~~LE~~G~l~ 56 (87)
T d1stza1 20 NKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIY 56 (87)
T ss_dssp HCSCBCHHHHHHHSCCCSCHHHHHHHHHHHHHTTSEE
T ss_pred cCCccCHHHHHHHhCCCCCHHHHHHHHHHHHHCCccc
Confidence 46899988898889999 7999999999999999943
No 5
>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}
Probab=50.03 E-value=29 Score=29.83 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=48.7
Q ss_pred eEEEEeeccccccCCChHH-----HHHHHHHHHcCCcEEEEEcCCCCCchhhhhhhccccCCCcceeEEEecccccccCC
Q 001237 321 VIGLILQRSHIVTGDDSHY-----VAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGG 395 (1117)
Q Consensus 321 ~Vgil~yrs~~~~g~~~~~-----dalI~aLE~~Gl~vipvf~~gl~~~~~v~~~f~~~~~~~~~vDaiIn~tgF~L~gg 395 (1117)
+|+||+-... .-..+ .++.++|.+.|.+|+.+...... +.. .....+|++.|+. .|
T Consensus 4 kI~vl~GG~S----~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~~~--------~~~--~~~~~~d~vF~~l-----HG 64 (96)
T d1iowa1 4 KIAVLLGGTS----AEREVSLNSGAAVLAGLREGGIDAYPVDPKEVD--------VTQ--LKSMGFQKVFIAL-----HG 64 (96)
T ss_dssp EEEEECCCSS----TTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSC--------GGG--TTTTTEEEEEECC-----CS
T ss_pred eEEEEeCcCc----hhhHhHHhhHHHHHHHHHHcCeeEeeecCcccc--------chh--hhccCceeEEEec-----cC
Confidence 5899886432 11222 57899999999999987432211 111 2234689988843 33
Q ss_pred CCCCCchhHHHHhhhCCCcEEeE
Q 001237 396 PARQDHPRAIEALRKLDVPYIVA 418 (1117)
Q Consensus 396 pa~~~~~~~~~~L~~LnVPvl~a 418 (1117)
+-+.|. ..+.+|+.++|||...
T Consensus 65 ~~GEdG-~iQ~~le~l~IPytGs 86 (96)
T d1iowa1 65 RGGEDG-TLQGMLELMGLPYTGS 86 (96)
T ss_dssp TTTSSS-HHHHHHHHHTCCBSSC
T ss_pred cchhcc-HHHHHHHHcCCCccCC
Confidence 334443 3567999999998643
No 6
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.83 E-value=4.5 Score=41.60 Aligned_cols=62 Identities=23% Similarity=0.332 Sum_probs=38.2
Q ss_pred CCCeEEEEeecccc----ccCCChHHHHHHHHHHHcCCcEEEEEcCCCCCchhhhhhhccccCCCcceeEEEecc
Q 001237 318 DAPVIGLILQRSHI----VTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLT 388 (1117)
Q Consensus 318 ~~p~Vgil~yrs~~----~~g~~~~~dalI~aLE~~Gl~vipvf~~gl~~~~~v~~~f~~~~~~~~~vDaiIn~t 388 (1117)
.||+|||+...... ..+..-....-++.+|+.|..|+|+....- ...++++|.. +|.||-.-
T Consensus 2 ~kPiIGI~~~~~~~~~~~~~~~~yi~~sYvk~ie~aGa~vvpi~~~~~--~~~~~~~l~~-------idGillpG 67 (288)
T d1l9xa_ 2 KKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLT--EKDYEILFKS-------INGILFPG 67 (288)
T ss_dssp CCCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHHH-------SSEEEECC
T ss_pred CCCEEEEeCCcccCcccccchHHHHHHHHHHHHHHCCCEEEEECCCCC--HHHHHHHHhh-------cCCeEecC
Confidence 37999999753221 111111223578999999999999975432 2445666643 78777543
No 7
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=41.40 E-value=6.3 Score=41.18 Aligned_cols=35 Identities=26% Similarity=0.403 Sum_probs=27.6
Q ss_pred eEEEEeecCCCCC-CCccccCCCChHHHHHHHHHHHHHCCCCCC
Q 001237 498 KLAITVFSFPPDK-GNIGTAAYLNVFSSIFSVLKDLQRDGYNVE 540 (1117)
Q Consensus 498 KVAIil~nyPp~~-g~iGtAa~LDv~~Sl~~iL~~Lk~~GY~v~ 540 (1117)
||+|+-+.|||.+ |.+|+ .+..+-++|++.|++|.
T Consensus 2 kIl~~~~~~pP~~~GG~~~--------~~~~La~~L~~~Gh~V~ 37 (437)
T d2bisa1 2 KVLLLGFEFLPVKVGGLAE--------ALTAISEALASLGHEVL 37 (437)
T ss_dssp EEEEECSCCTTCCSSSHHH--------HHHHHHHHHHHTTCEEE
T ss_pred EEEEECCccCCcccCCHHH--------HHHHHHHHHHHcCCEEE
Confidence 8999999999975 44443 34567889999999984
No 8
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}
Probab=39.85 E-value=19 Score=35.84 Aligned_cols=65 Identities=15% Similarity=0.026 Sum_probs=34.1
Q ss_pred CCCCcEEEEEEEcccch---hHHHHHHHHHHHhccCCccEEEEEehhhhc--------CChhhHHHHHHHhhcCCEEEE
Q 001237 72 DNLPTVKIVYVVLEAQY---QSALSAAVQALNQQVNYASYEVVGYLVEEL--------RDVDTYKTFCKDLENANIFIG 139 (1117)
Q Consensus 72 ~~~~~~~~v~v~~~~~~---~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~adi~~~ 139 (1117)
.+.+++||++|.+...- +..+.+.+....++. |.++++. ...++ .++...+++.+.+..||.||.
T Consensus 30 ~~~~~~KIl~I~GS~R~~s~s~~la~~~~~~l~~~-G~ev~~i--dL~dlpl~~~~~~~~~~~v~~l~~~l~~AD~vIi 105 (233)
T d2fzva1 30 PDAPPVRILLLYGSLRARSFSRLAVEEAARLLQFF-GAETRIF--DPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVW 105 (233)
T ss_dssp CCCSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHT-TCEEEEB--CCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEE
T ss_pred CCCCCCeEEEEeCCCCCCCHHHHHHHHHHHHhhhc-CeEEEEE--ccCCCCCCCcccccCCHHHHHHHHHHhhcCeeEE
Confidence 34677899999986543 444444344333332 3444443 33332 123345566666666665544
No 9
>d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]}
Probab=38.75 E-value=30 Score=32.94 Aligned_cols=86 Identities=16% Similarity=0.191 Sum_probs=56.2
Q ss_pred CeEEEEeeccccccCCChHHHHHHHHHHHcCCcEEEEEcCCCCCchhhhhhhccccCCCcceeEEEecccccccCCCCCC
Q 001237 320 PVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQ 399 (1117)
Q Consensus 320 p~Vgil~yrs~~~~g~~~~~dalI~aLE~~Gl~vipvf~~gl~~~~~v~~~f~~~~~~~~~vDaiIn~tgF~L~ggpa~~ 399 (1117)
|.|+|++-.+ .|..+.....+.|++-|+..--...++-....-+.+|... -....++++|-..|.+-
T Consensus 1 PkV~Ii~Gs~----SD~~~~~~a~~~L~~~gi~~~~~v~saHr~p~rl~~~~~~--~~~~~~~viIa~AG~aa------- 67 (169)
T d1o4va_ 1 PRVGIIMGSD----SDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKN--AEERGIEVIIAGAGGAA------- 67 (169)
T ss_dssp CEEEEEESCG----GGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHH--TTTTTCCEEEEEEESSC-------
T ss_pred CeEEEEECcH----hhHHHHHHHHHHHHHcCCcEEEEEeeeecCHHHHHHHHHH--HHhcCCeEEEEeecCCc-------
Confidence 6799998764 3788999999999999999886666655443445555443 12234788988776541
Q ss_pred CchhHHHHhhhCCCcEEeEecC
Q 001237 400 DHPRAIEALRKLDVPYIVALPL 421 (1117)
Q Consensus 400 ~~~~~~~~L~~LnVPvl~ai~l 421 (1117)
.-+..+ =.....||| ++|.
T Consensus 68 ~Lpgvv--A~~t~~PVI-gvP~ 86 (169)
T d1o4va_ 68 HLPGMV--ASITHLPVI-GVPV 86 (169)
T ss_dssp CHHHHH--HHHCSSCEE-EEEE
T ss_pred CchHHH--HHhcceeEE-eccc
Confidence 011222 245688999 5554
No 10
>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=35.64 E-value=32 Score=32.10 Aligned_cols=62 Identities=15% Similarity=0.034 Sum_probs=33.7
Q ss_pred EEEEEEEcccchhHHHHHHHHHHHhccCCccEEEEEehhhhc----------CChhhHHHHHHHhhcCCEEEE
Q 001237 77 VKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEEL----------RDVDTYKTFCKDLENANIFIG 139 (1117)
Q Consensus 77 ~~~v~v~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~adi~~~ 139 (1117)
|||++|.+...-.+.-...++.+.+..+. ..++..+...++ ..++..+++.+.+..||.||.
T Consensus 1 MKIl~i~GS~r~~s~s~~l~~~~~~~~~~-~~ev~~idl~dlP~~~~d~~~~~~~~~~~~~~~~i~~aD~iii 72 (174)
T d1rtta_ 1 IKVLGISGSLRSGSYNSAALQEAIGLVPP-GMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALLF 72 (174)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHTTCCT-TCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEEE
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhcCC-CCEEEEEecccCCCccccccccCCCHHHHHHHHHhhcCCeEEE
Confidence 78999988776655544445555544432 344444333322 123445556666666665544
No 11
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.16 E-value=95 Score=30.39 Aligned_cols=80 Identities=19% Similarity=0.152 Sum_probs=53.0
Q ss_pred EEEEEEcccchhHHHHHHHHHHHhccCCccEEEEEehhhhcCChhhHHHHHHHhhcC----CEEEEec-cccHHHHHHHH
Q 001237 78 KIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENA----NIFIGSL-IFVEELALKIK 152 (1117)
Q Consensus 78 ~~v~v~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a----di~~~sl-lf~~~~~~~~~ 152 (1117)
|+|+||+-+.=.+. ..++.|.++ |..|-++. +|+++++++.+.+... +++.... +..++.++.+.
T Consensus 11 Kv~lITGas~GIG~--aiA~~la~~--G~~Vv~~~------r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v 80 (257)
T d1xg5a_ 11 RLALVTGASGGIGA--AVARALVQQ--GLKVVGCA------RTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 80 (257)
T ss_dssp CEEEEESTTSHHHH--HHHHHHHHT--TCEEEEEE------SCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCCHHHH--HHHHHHHHC--CCEEEEEE------CCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHH
Confidence 58999998766555 234455554 33454443 4677788888877754 4443322 45788888888
Q ss_pred HHHHHhhcCcCEEEe
Q 001237 153 AAVEKERDRLDAVLV 167 (1117)
Q Consensus 153 ~~v~~~~~~~~~~~~ 167 (1117)
+.+...-.++|.++-
T Consensus 81 ~~~~~~~g~iD~lVn 95 (257)
T d1xg5a_ 81 SAIRSQHSGVDICIN 95 (257)
T ss_dssp HHHHHHHCCCSEEEE
T ss_pred HHHHHhcCCCCEEEe
Confidence 888887789997755
No 12
>d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.28 E-value=54 Score=30.64 Aligned_cols=61 Identities=10% Similarity=0.107 Sum_probs=33.6
Q ss_pred EEEEEEEccc---chhHHHHHHHHHHHhcc-----CCccEEEEEehhhh---------------------cCChhhHHHH
Q 001237 77 VKIVYVVLEA---QYQSALSAAVQALNQQV-----NYASYEVVGYLVEE---------------------LRDVDTYKTF 127 (1117)
Q Consensus 77 ~~~v~v~~~~---~~~~~~~~a~~~l~~~~-----~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 127 (1117)
|||++|.+.+ ++...+.+.+....+.. ++.++++. .... ...++..+++
T Consensus 1 MKIlvI~GS~R~~s~~~~la~~~~~~l~~~~~~~~~g~~v~~i--dL~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T d1t0ia_ 1 MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVV--DLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSW 78 (185)
T ss_dssp CEEEEEECCCCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEE--CHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHH
T ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHHHHhhhhcCCCcEEEEE--eccccCccccchhhhccccccccccccCCHHHHHH
Confidence 7899998865 45555555554433332 34445543 2221 1123456777
Q ss_pred HHHhhcCCEEEE
Q 001237 128 CKDLENANIFIG 139 (1117)
Q Consensus 128 ~~~i~~adi~~~ 139 (1117)
.+.+..||.||.
T Consensus 79 ~~~i~~AD~iIi 90 (185)
T d1t0ia_ 79 SRIVNALDIIVF 90 (185)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHHhCCCeEE
Confidence 777777775544
No 13
>d1zl0a2 c.23.16.7 (A:3-169) LD-carboxypeptidase A, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=29.58 E-value=66 Score=30.21 Aligned_cols=60 Identities=18% Similarity=0.179 Sum_probs=41.7
Q ss_pred CCeEEEEeeccccccCCChHHHHHHHHHHHcCCcEEEEEcCCCC-------Cc-----hhhhhhhccccCCCcceeEEEe
Q 001237 319 APVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLD-------FA-----GPVERFFVDPVMKKPMVNSAIS 386 (1117)
Q Consensus 319 ~p~Vgil~yrs~~~~g~~~~~dalI~aLE~~Gl~vipvf~~gl~-------~~-----~~v~~~f~~~~~~~~~vDaiIn 386 (1117)
.-+|||+.--+.+ +...+++.++.||++|++|+. ...+. .. ..+.+.|.+ +.|++|+.
T Consensus 13 Gd~I~iiAPS~~~---~~~~l~~~~~~L~~~G~~v~~--~~~~~~~~~~~agtd~~Ra~dL~~a~~d-----p~i~aI~~ 82 (167)
T d1zl0a2 13 DGRVALIAPASAI---ATDVLEATLRQLEVHGVDYHL--GRHVEARYRYLAGTVEQRLEDLHNAFDM-----PDITAVWC 82 (167)
T ss_dssp CSEEEEECCSBCC---CHHHHHHHHHHHHHTTCCEEE--CTTTTCCBTTBSSCHHHHHHHHHHHHHS-----TTEEEEEE
T ss_pred CCEEEEEeCCCcC---CHHHHHHHHHHHHHCCCEEEE--CcccccccCcccCCHHHHHHHHHHhccC-----cCCCEEEE
Confidence 3499999987765 457789999999999999883 22211 11 124455655 46999988
Q ss_pred cc
Q 001237 387 LT 388 (1117)
Q Consensus 387 ~t 388 (1117)
..
T Consensus 83 ~r 84 (167)
T d1zl0a2 83 LR 84 (167)
T ss_dssp SC
T ss_pred Cc
Confidence 65
No 14
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=29.03 E-value=27 Score=34.24 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=47.2
Q ss_pred eEEEEeeccccccCCChHHHHHHHHHHHcCCcEEEEEcCCCCCc---hhhhhhhccccCCCcceeEEEecccccccCCCC
Q 001237 321 VIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFA---GPVERFFVDPVMKKPMVNSAISLTGFALVGGPA 397 (1117)
Q Consensus 321 ~Vgil~yrs~~~~g~~~~~dalI~aLE~~Gl~vipvf~~gl~~~---~~v~~~f~~~~~~~~~vDaiIn~tgF~L~ggpa 397 (1117)
.||+++..-.. ......+.++-++++++|.+++-.+++.-+.. ..++.+ .. ..||+||-... .
T Consensus 2 ~igv~~~~l~~-~~~~~i~~~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l-~~-----~~vdgiIl~~~--~----- 67 (271)
T d1jyea_ 2 LIGVATSSLAL-HAPSQIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNL-LA-----QRVSGLIINYP--L----- 67 (271)
T ss_dssp EEEEEESCTTS-HHHHHHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHH-HT-----TTCSCEEEESC--C-----
T ss_pred EEEEEeCCCCC-hHHHHHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHH-Hh-----cCCCEEEeccc--c-----
Confidence 58888874332 22346788899999999999984443322211 123332 21 25898764211 1
Q ss_pred CCCchhHHHHhhhCCCcEEe
Q 001237 398 RQDHPRAIEALRKLDVPYIV 417 (1117)
Q Consensus 398 ~~~~~~~~~~L~~LnVPvl~ 417 (1117)
.+.+.....+++.++||+.
T Consensus 68 -~~~~~~~~~~~~~~iPvV~ 86 (271)
T d1jyea_ 68 -DDQDAIAVEAACTNVPALF 86 (271)
T ss_dssp -CHHHHHHHHHHTTTSCEEE
T ss_pred -CchhHHHHHHHhcCCCeee
Confidence 1122334567899999973
No 15
>d1e4ea1 c.30.1.2 (A:2-131) D-alanine:D-lactate ligase VanA, N-domain {Enterococcus faecium [TaxId: 1352]}
Probab=27.99 E-value=41 Score=30.11 Aligned_cols=36 Identities=8% Similarity=0.125 Sum_probs=26.7
Q ss_pred CCeEEEEeeccccccCCChHHH------HHHHHHHHcCCcEEEEEcC
Q 001237 319 APVIGLILQRSHIVTGDDSHYV------AVIMELEARGAKVIPIFAG 359 (1117)
Q Consensus 319 ~p~Vgil~yrs~~~~g~~~~~d------alI~aLE~~Gl~vipvf~~ 359 (1117)
|-.|+|||-.. ..+|.- .++++|.+.+.+|+|++..
T Consensus 2 K~kV~vl~GG~-----S~EheVSl~Sa~~v~~~L~~~~y~v~~i~i~ 43 (130)
T d1e4ea1 2 RIKVAILFGGC-----SEEHDVSVKSAIEIAANINKEKYEPLYIGIT 43 (130)
T ss_dssp CEEEEEEEECS-----STTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CcEEEEEeCCC-----chhhHHHHHHHHHHHHhhcccceeEEEEEec
Confidence 45799999753 234443 3688888899999999974
No 16
>d2dria_ c.93.1.1 (A:) D-ribose-binding protein {Escherichia coli, strain k-12 [TaxId: 562]}
Probab=25.64 E-value=72 Score=30.25 Aligned_cols=85 Identities=11% Similarity=0.042 Sum_probs=47.4
Q ss_pred CeEEEEeeccccccCC---ChHHHHHHHHHHHcCCcEEEEEcCCCCCchhhhhhhccccCCCcceeEEEecccccccCCC
Q 001237 320 PVIGLILQRSHIVTGD---DSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGP 396 (1117)
Q Consensus 320 p~Vgil~yrs~~~~g~---~~~~dalI~aLE~~Gl~vipvf~~gl~~~~~v~~~f~~~~~~~~~vDaiIn~tgF~L~ggp 396 (1117)
.||||+...- + | ...+.++-+++++.|++++ ++...-+. ....+.+.. .-...+|++|-....
T Consensus 2 ~tIgvvvp~~---~-~~f~~~~~~gi~~~a~~~g~~~~-i~~~~~~~-~~~~~~i~~--~~~~~~d~ii~~~~~------ 67 (271)
T d2dria_ 2 DTIALVVSTL---N-NPFFVSLKDGAQKEADKLGYNLV-VLDSQNNP-AKELANVQD--LTVRGTKILLINPTD------ 67 (271)
T ss_dssp CEEEEEESCS---S-SHHHHHHHHHHHHHHHHHTCEEE-EEECTTCH-HHHHHHHHH--HTTTTEEEEEECCSS------
T ss_pred CEEEEEeCCC---C-CHHHHHHHHHHHHHHHHcCCEEE-EEeCCCCH-HHHHHHHHH--HHhcCCccccccccc------
Confidence 5899998631 1 1 2445567777888999997 44332221 111222211 112358988764321
Q ss_pred CCCCchhHHHHhhhCCCcEEeEe
Q 001237 397 ARQDHPRAIEALRKLDVPYIVAL 419 (1117)
Q Consensus 397 a~~~~~~~~~~L~~LnVPvl~ai 419 (1117)
........+.+++.++|++..-
T Consensus 68 -~~~~~~~~~~~~~~~ipvV~~~ 89 (271)
T d2dria_ 68 -SDAVGNAVKMANQANIPVITLD 89 (271)
T ss_dssp -TTTTHHHHHHHHHTTCCEEEES
T ss_pred -ccchHHHHHHHhhcceeEEEec
Confidence 1112345677889999988543
No 17
>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}
Probab=25.64 E-value=76 Score=34.45 Aligned_cols=106 Identities=11% Similarity=0.060 Sum_probs=62.5
Q ss_pred eEEEEeeccccccCCChHHHHHHHHHHH-cCCcEEEEEcCCCCC-c---------hhhhhhhccccCCCcce---eEEEe
Q 001237 321 VIGLILQRSHIVTGDDSHYVAVIMELEA-RGAKVIPIFAGGLDF-A---------GPVERFFVDPVMKKPMV---NSAIS 386 (1117)
Q Consensus 321 ~Vgil~yrs~~~~g~~~~~dalI~aLE~-~Gl~vipvf~~gl~~-~---------~~v~~~f~~~~~~~~~v---DaiIn 386 (1117)
.|+|+.-=..-+-|| .++++++++++ -|..||||-+.|... + .++.+++.......... .-.||
T Consensus 144 ~I~V~sTC~~~lIGD--Di~~v~~~~~~~~~~~Vi~v~t~Gf~g~s~~~G~~~a~~al~~~l~~~~~~~~~~~~~~~~VN 221 (477)
T d1m1na_ 144 GISVQSECPIGLIGD--DIESVSKVKGAELSKTIVPVRCEGFRGVSQSLGHHIANDAVRDWVLGKRDEDTTFASTPYDVA 221 (477)
T ss_dssp CEEEEECTHHHHHTC--CHHHHHHHHHHHHTCCEEEECCCTTSSSSHHHHHHHHHHHHHHHTTTTTTTCCCSCCCTTEEE
T ss_pred EEEEECCcHHHHHhh--CHHHHHHHHHHHhCCcEEEEecCCccccchhHHHHHHHHHHHHHhhcccCCcccccCCCceee
Confidence 466654333322333 37889999986 499999998877632 1 23445554311111100 11355
Q ss_pred cccccccCCCCCCCchhHHHHhhhCCCcEEeEecCCCCCHHHHhcCC
Q 001237 387 LTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNST 433 (1117)
Q Consensus 387 ~tgF~L~ggpa~~~~~~~~~~L~~LnVPvl~ai~l~~qt~eeW~~s~ 433 (1117)
+.|-... ..|..+...+|+++++.|...++ ...|.++.+...
T Consensus 222 iiG~~~~----~gD~~eik~lLe~~Gi~v~~~~~-g~~s~eei~~~~ 263 (477)
T d1m1na_ 222 IIGDYNI----GGDAWSSRILLEEMGLRCVAQWS-GDGSISEIELTP 263 (477)
T ss_dssp EEEECCB----TTTTHHHHHHHHHTTCEEEEEEE-TTCCHHHHHHGG
T ss_pred ecCCCCC----cccHHHHHHHHHHccCCeEEEcC-CCCCHHHHHhhh
Confidence 5442111 23556677899999999987775 467899998763
No 18
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=25.62 E-value=12 Score=37.47 Aligned_cols=33 Identities=15% Similarity=0.402 Sum_probs=27.4
Q ss_pred EEEEeecCCCCCCCccccCCCChHHHHHHHHHHHHHCCCCCC
Q 001237 499 LAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVE 540 (1117)
Q Consensus 499 VAIil~nyPp~~g~iGtAa~LDv~~Sl~~iL~~Lk~~GY~v~ 540 (1117)
||++.|+|.| .| |+ -..+.++.++|.+.||+|.
T Consensus 2 i~f~~~~y~p----~G-G~----e~~~~~la~~L~~~G~~V~ 34 (370)
T d2iw1a1 2 VAFCLYKYFP----FG-GL----QRDFMRIASTVAARGHHVR 34 (370)
T ss_dssp EEEECSEECT----TC-HH----HHHHHHHHHHHHHTTCCEE
T ss_pred EEEEecCCCC----CC-CH----HHHHHHHHHHHHHCCCEEE
Confidence 8999999987 35 22 4688999999999999994
No 19
>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}
Probab=25.19 E-value=45 Score=36.86 Aligned_cols=93 Identities=15% Similarity=0.136 Sum_probs=50.6
Q ss_pred eEEEEeeccccccCCChHHHHHHHHHHHc-----CCcEEEEEcCCCCCc---------hhhhhhhccccCCCcceeEEEe
Q 001237 321 VIGLILQRSHIVTGDDSHYVAVIMELEAR-----GAKVIPIFAGGLDFA---------GPVERFFVDPVMKKPMVNSAIS 386 (1117)
Q Consensus 321 ~Vgil~yrs~~~~g~~~~~dalI~aLE~~-----Gl~vipvf~~gl~~~---------~~v~~~f~~~~~~~~~vDaiIn 386 (1117)
.|+|+.--..-+-|| .++++|++++++ |+.|++|-+.|+..+ ..+-+.|......++.-.-.||
T Consensus 144 ~I~V~tTC~~eiIGD--Dl~~vi~~~~~~~~~~~~~pvi~v~tpgF~gs~~~G~d~a~~ai~~~l~~~~~~~~~~~~~iN 221 (519)
T d1qh8b_ 144 IIAVSTTCMAEVIGD--DLQAFIANAKKDGFVDSSIAVPHAHTPSFIGSHVTGWDNMFEGFAKTFTADYQGQPGKLPKLN 221 (519)
T ss_dssp EEEEEECHHHHHHTC--CHHHHHHHHHHTTSSCTTSBCCBCCCCTTSSCHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEE
T ss_pred EEEEecCCChhhCCC--CHHHHHHHHHHhcCCCCCceEEEEeCCCccCcHHHHHHHHHHHHHHHhccccCCCCCCCCeEE
Confidence 567665444433333 378899999987 455666666665422 1222334332222222234566
Q ss_pred cc-cccccCCCCCCCchhHHHHhhhCCCcEEeEe
Q 001237 387 LT-GFALVGGPARQDHPRAIEALRKLDVPYIVAL 419 (1117)
Q Consensus 387 ~t-gF~L~ggpa~~~~~~~~~~L~~LnVPvl~ai 419 (1117)
.. +|.+. ..|..+...+|+.+++.+....
T Consensus 222 ii~~~~~~----~gd~~eikrll~~~Gi~~~~l~ 251 (519)
T d1qh8b_ 222 LVTGFETY----LGNFRVLKRMMEQMAVPCSLLS 251 (519)
T ss_dssp EECCSCCC----HHHHHHHHHHHHHHTCCEEESS
T ss_pred EecCcCCC----cccHHHHHHHHHHcCCceEecC
Confidence 54 33221 1234456679999999988543
No 20
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=24.81 E-value=65 Score=30.89 Aligned_cols=83 Identities=16% Similarity=0.186 Sum_probs=48.4
Q ss_pred CeEEEEeeccccccCC---ChHHHHHHHHHHHcCCcEEEEEcCCCCCchhhhhhhccccCCCcceeEEEecccccccCCC
Q 001237 320 PVIGLILQRSHIVTGD---DSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGP 396 (1117)
Q Consensus 320 p~Vgil~yrs~~~~g~---~~~~dalI~aLE~~Gl~vipvf~~gl~~~~~v~~~f~~~~~~~~~vDaiIn~tgF~L~ggp 396 (1117)
.||||++-. ++ | ...+.++.++++++|++++...+.+ +. ..-.+++.. .-...+|+||-....
T Consensus 4 ~tIgvvvp~---l~-~~f~~~~~~gi~~~~~~~g~~~~~~~~~~-~~-~~e~~~i~~--~~~~~vdgii~~~~~------ 69 (275)
T d2nzug1 4 TTVGVIIPD---IS-NIFYAELARGIEDIATMYKYNIILSNSDQ-NQ-DKELHLLNN--MLGKQVDGIIFMSGN------ 69 (275)
T ss_dssp SEEEEEESC---TT-SHHHHHHHHHHHHHHHHTTCEEEEEECTT-CH-HHHHHHHHH--HHTTCCSEEEECCSC------
T ss_pred CEEEEECCC---CC-CHHHHHHHHHHHHHHHHcCCEEEEEECCC-CH-HHHHHHHHH--HHhcCCceeeccccc------
Confidence 599999852 11 2 2456778888999999998544332 21 111122211 011258998865422
Q ss_pred CCCCchhHHHHhhhCCCcEEeEe
Q 001237 397 ARQDHPRAIEALRKLDVPYIVAL 419 (1117)
Q Consensus 397 a~~~~~~~~~~L~~LnVPvl~ai 419 (1117)
..+.....+.+.++|++..-
T Consensus 70 ---~~~~~~~~l~~~~~pvv~~~ 89 (275)
T d2nzug1 70 ---VTEEHVEELKKSPVPVVLAA 89 (275)
T ss_dssp ---CCHHHHHHHHHCSSCEEEES
T ss_pred ---hhhHHHHHHhhccccccccc
Confidence 23345567889999987553
No 21
>d1esza_ c.92.2.1 (A:) Periplasmic ferric siderophore binding protein FhuD {Escherichia coli [TaxId: 562]}
Probab=21.79 E-value=1.1e+02 Score=29.44 Aligned_cols=62 Identities=11% Similarity=0.071 Sum_probs=41.1
Q ss_pred ceEEEEE-EeccccccC--ChhHHHHHHHhCCeeeeCCCCCcceeEEecccccCCCcceEEEecC
Q 001237 1024 ETVALVL-WGTDNIKTY--GESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCS 1085 (1117)
Q Consensus 1024 e~va~vL-Wgtdtmrt~--Ge~iAQiL~LlGvrPvwd~~GrV~g~ElIPL~ELgRPRIDVvv~iS 1085 (1117)
+...+++ +....+.+. +-.+.+++..+|.+++++..+.-.+...|.+|+|-.=.=|+++-++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~n~~~~~~~~~~~~~vs~E~l~~~~pd~ii~~~ 207 (260)
T d1esza_ 143 RPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFD 207 (260)
T ss_dssp CCEEEEEEEETTEEEEECTTSTTHHHHHHTTCCBSCCSCCCTTSEEEECGGGGGGCCSCEEEEEC
T ss_pred CceEEEEEEecCCEEEEEccccHHHHHHHcCCcccccccccccccccCCHHHHHhcCCCEEEEEc
Confidence 3343443 434455554 4458899999999999987777777888999998642235554443
No 22
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.08 E-value=1.4e+02 Score=28.93 Aligned_cols=80 Identities=19% Similarity=0.162 Sum_probs=54.0
Q ss_pred EEEEEEcccchhHHHHHHHHHHHhccCCccEEEEEehhhhcCChhhHHHHHHHhhcCCEEEEeccccHHHHHHHHHHHHH
Q 001237 78 KIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEK 157 (1117)
Q Consensus 78 ~~v~v~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~adi~~~sllf~~~~~~~~~~~v~~ 157 (1117)
|+++||+-++=.+. ..++.|.++ |-.|-+.. +|++.++++++.+.++-.+.+++ ..++.++.+.+.+..
T Consensus 7 K~alITGas~GIG~--aia~~la~~--Ga~V~i~~------r~~~~~~~~~~~~~~~~~~~~Dv-s~~~~v~~~~~~~~~ 75 (250)
T d1ydea1 7 KVVVVTGGGRGIGA--GIVRAFVNS--GARVVICD------KDESGGRALEQELPGAVFILCDV-TQEDDVKTLVSETIR 75 (250)
T ss_dssp CEEEEETCSSHHHH--HHHHHHHHT--TCEEEEEE------SCHHHHHHHHHHCTTEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHH--HHHHHHHHC--CCEEEEEE------CCHHHHHHHHHhcCCCeEEEccC-CCHHHHHHHHHHHHH
Confidence 68999987765553 234455554 23454443 56788889999888766555554 567777777777777
Q ss_pred hhcCcCEEEec
Q 001237 158 ERDRLDAVLVF 168 (1117)
Q Consensus 158 ~~~~~~~~~~~ 168 (1117)
...++|.++..
T Consensus 76 ~~g~iDilVnn 86 (250)
T d1ydea1 76 RFGRLDCVVNN 86 (250)
T ss_dssp HHSCCCEEEEC
T ss_pred hcCCCCEEEec
Confidence 77889987654
Done!