Query 001238
Match_columns 1117
No_of_seqs 1118 out of 7598
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 19:33:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001238.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001238hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-115 5E-120 1135.5 66.2 917 31-1059 27-954 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.1E-61 4.6E-66 629.0 30.8 514 98-688 69-585 (968)
3 KOG1187 Serine/threonine prote 100.0 1.2E-48 2.7E-53 440.7 28.3 291 758-1059 61-355 (361)
4 KOG0192 Tyrosine kinase specif 100.0 5.1E-44 1.1E-48 399.5 26.6 259 778-1061 43-308 (362)
5 KOG0581 Mitogen-activated prot 100.0 2.1E-44 4.6E-49 379.8 21.7 251 777-1052 80-335 (364)
6 KOG0595 Serine/threonine-prote 100.0 1.3E-43 2.7E-48 376.3 21.5 199 775-984 9-216 (429)
7 KOG0472 Leucine-rich repeat pr 100.0 6.9E-47 1.5E-51 396.3 -6.2 480 94-592 41-541 (565)
8 KOG0472 Leucine-rich repeat pr 100.0 6.8E-48 1.5E-52 403.8 -14.1 528 102-685 13-562 (565)
9 KOG0615 Serine/threonine prote 100.0 2.4E-43 5.3E-48 372.8 15.4 252 775-1051 171-436 (475)
10 KOG0575 Polo-like serine/threo 100.0 1.9E-42 4E-47 385.6 22.3 247 776-1051 18-268 (592)
11 KOG0197 Tyrosine kinases [Sign 100.0 5.3E-42 1.2E-46 379.2 21.1 257 777-1059 207-464 (468)
12 KOG0591 NIMA (never in mitosis 100.0 1.9E-43 4.1E-48 355.0 7.4 254 777-1053 20-282 (375)
13 KOG0598 Ribosomal protein S6 k 100.0 6.1E-42 1.3E-46 361.3 17.8 248 775-1050 24-279 (357)
14 KOG0592 3-phosphoinositide-dep 100.0 9.6E-41 2.1E-45 364.8 21.8 270 775-1069 72-362 (604)
15 KOG1026 Nerve growth factor re 100.0 3.1E-40 6.8E-45 382.2 19.0 263 776-1061 486-767 (774)
16 KOG0582 Ste20-like serine/thre 100.0 7.2E-40 1.6E-44 349.8 19.6 261 775-1051 25-292 (516)
17 KOG0198 MEKK and related serin 100.0 5.4E-40 1.2E-44 355.0 19.0 260 776-1057 17-281 (313)
18 KOG0593 Predicted protein kina 100.0 3.3E-40 7E-45 335.1 14.4 263 777-1051 3-283 (396)
19 KOG3653 Transforming growth fa 100.0 4.5E-39 9.8E-44 346.1 22.6 268 777-1061 211-508 (534)
20 KOG0196 Tyrosine kinase, EPH ( 100.0 1.2E-39 2.6E-44 367.8 18.2 266 777-1066 630-901 (996)
21 KOG0661 MAPK related serine/th 100.0 3.9E-40 8.4E-45 354.6 13.6 264 773-1052 7-291 (538)
22 KOG0578 p21-activated serine/t 100.0 1.4E-39 3E-44 359.8 17.9 253 772-1051 269-522 (550)
23 KOG2052 Activin A type IB rece 100.0 1.1E-38 2.4E-43 340.5 23.3 271 773-1058 208-505 (513)
24 KOG0600 Cdc2-related protein k 100.0 4.1E-39 9E-44 349.3 20.2 262 776-1051 117-399 (560)
25 KOG4194 Membrane glycoprotein 100.0 4.9E-41 1.1E-45 366.8 4.2 318 270-588 128-448 (873)
26 KOG0193 Serine/threonine prote 100.0 1.8E-39 3.9E-44 359.0 14.9 259 776-1058 392-655 (678)
27 KOG0597 Serine-threonine prote 100.0 4.8E-39 1E-43 350.3 16.8 246 776-1051 2-250 (808)
28 KOG4194 Membrane glycoprotein 100.0 1.7E-40 3.6E-45 362.7 4.5 373 270-645 81-456 (873)
29 KOG0583 Serine/threonine prote 100.0 7.7E-38 1.7E-42 353.8 25.0 254 774-1057 15-279 (370)
30 KOG0659 Cdk activating kinase 100.0 3.3E-38 7.1E-43 315.8 19.0 262 776-1052 2-281 (318)
31 KOG0616 cAMP-dependent protein 100.0 2.2E-38 4.8E-43 321.7 15.9 227 776-1028 44-274 (355)
32 KOG1094 Discoidin domain recep 100.0 5.6E-38 1.2E-42 343.3 18.9 265 775-1056 537-804 (807)
33 KOG4721 Serine/threonine prote 100.0 1.1E-38 2.3E-43 347.0 13.1 241 779-1055 127-367 (904)
34 cd05102 PTKc_VEGFR3 Catalytic 100.0 1E-37 2.3E-42 357.5 21.7 263 775-1059 6-337 (338)
35 KOG0588 Serine/threonine prote 100.0 7.1E-38 1.5E-42 348.9 18.7 247 776-1052 12-263 (786)
36 KOG0194 Protein tyrosine kinas 100.0 1.4E-37 3E-42 350.7 20.0 260 776-1062 157-426 (474)
37 KOG0201 Serine/threonine prote 100.0 1.1E-38 2.3E-43 341.3 9.3 249 775-1051 12-262 (467)
38 KOG0618 Serine/threonine phosp 100.0 1.3E-40 2.8E-45 383.2 -9.0 496 89-661 12-510 (1081)
39 cd05096 PTKc_DDR1 Catalytic do 100.0 1.6E-36 3.6E-41 342.2 24.1 264 776-1055 5-304 (304)
40 PHA02988 hypothetical protein; 100.0 2.1E-36 4.6E-41 336.7 24.6 246 782-1057 26-280 (283)
41 KOG1989 ARK protein kinase fam 100.0 7.1E-37 1.5E-41 356.7 19.8 261 774-1061 35-316 (738)
42 KOG0605 NDR and related serine 100.0 8.6E-37 1.9E-41 334.8 19.2 206 774-985 139-391 (550)
43 KOG0663 Protein kinase PITSLRE 100.0 1.2E-36 2.6E-41 313.3 19.0 262 775-1051 75-360 (419)
44 KOG2345 Serine/threonine prote 100.0 7.7E-38 1.7E-42 310.0 9.7 267 774-1056 19-300 (302)
45 KOG1095 Protein tyrosine kinas 100.0 2.1E-36 4.5E-41 363.6 23.9 264 775-1061 691-966 (1025)
46 KOG0694 Serine/threonine prote 100.0 8.4E-37 1.8E-41 344.0 18.9 242 775-1046 367-613 (694)
47 KOG0611 Predicted serine/threo 100.0 2.9E-37 6.2E-42 323.3 13.9 248 776-1054 53-305 (668)
48 PTZ00263 protein kinase A cata 100.0 3.2E-36 6.9E-41 343.1 23.7 244 776-1051 18-270 (329)
49 KOG0580 Serine/threonine prote 100.0 3.4E-37 7.4E-42 304.3 12.9 250 775-1053 21-274 (281)
50 cd05631 STKc_GRK4 Catalytic do 100.0 4.2E-36 9.1E-41 335.3 23.1 251 777-1051 1-260 (285)
51 KOG0585 Ca2+/calmodulin-depend 100.0 2.3E-36 5.1E-41 324.6 19.5 257 774-1054 95-374 (576)
52 cd05612 STKc_PRKX_like Catalyt 100.0 1.9E-36 4.1E-41 339.0 19.3 243 777-1051 2-253 (291)
53 cd05571 STKc_PKB Catalytic dom 100.0 4.2E-36 9.1E-41 341.3 22.3 241 782-1051 1-250 (323)
54 cd05106 PTKc_CSF-1R Catalytic 100.0 3.3E-36 7.1E-41 348.3 21.4 261 775-1057 37-373 (374)
55 cd05104 PTKc_Kit Catalytic dom 100.0 3E-36 6.6E-41 348.9 20.9 260 775-1056 34-374 (375)
56 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.3E-36 1.4E-40 341.7 22.8 253 776-1052 1-257 (333)
57 KOG0618 Serine/threonine phosp 100.0 2.1E-38 4.6E-43 365.0 2.3 463 76-590 23-487 (1081)
58 cd05585 STKc_YPK1_like Catalyt 100.0 9.1E-36 2E-40 337.0 22.9 237 784-1049 1-241 (312)
59 KOG0589 Serine/threonine prote 100.0 2.5E-36 5.5E-41 333.7 17.6 251 776-1052 4-258 (426)
60 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.2E-35 2.6E-40 328.2 22.5 255 776-1056 5-265 (266)
61 KOG0033 Ca2+/calmodulin-depend 100.0 9.9E-38 2.2E-42 307.3 5.1 251 775-1051 10-266 (355)
62 cd05595 STKc_PKB_beta Catalyti 100.0 2.2E-35 4.9E-40 335.2 24.7 241 782-1051 1-250 (323)
63 PTZ00426 cAMP-dependent protei 100.0 9.7E-36 2.1E-40 339.7 21.4 244 776-1051 30-283 (340)
64 cd05593 STKc_PKB_gamma Catalyt 100.0 2.2E-35 4.7E-40 335.9 23.4 242 782-1052 1-251 (328)
65 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-35 3.1E-40 313.7 19.7 263 777-1052 12-302 (323)
66 cd05628 STKc_NDR1 Catalytic do 100.0 2.4E-35 5.3E-40 340.7 23.5 203 776-984 1-238 (363)
67 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3E-35 6.6E-40 323.1 23.0 251 776-1053 4-255 (256)
68 cd05626 STKc_LATS2 Catalytic d 100.0 2E-35 4.3E-40 343.6 22.5 257 777-1052 2-305 (381)
69 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.5E-35 5.3E-40 329.6 22.1 199 776-984 5-206 (288)
70 KOG0660 Mitogen-activated prot 100.0 8.6E-36 1.9E-40 313.3 16.8 202 774-984 20-230 (359)
71 cd05584 STKc_p70S6K Catalytic 100.0 3.5E-35 7.5E-40 333.8 23.3 241 782-1051 2-255 (323)
72 cd05072 PTKc_Lyn Catalytic dom 100.0 4.3E-35 9.2E-40 323.0 23.2 255 776-1056 6-261 (261)
73 cd05614 STKc_MSK2_N N-terminal 100.0 3.6E-35 7.7E-40 335.5 23.1 251 777-1051 1-266 (332)
74 cd06649 PKc_MEK2 Catalytic dom 100.0 3.2E-35 7E-40 335.3 22.4 198 776-984 5-204 (331)
75 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.6E-35 7.9E-40 340.5 22.6 263 774-1058 35-399 (400)
76 cd05629 STKc_NDR_like_fungal C 100.0 9.8E-35 2.1E-39 337.7 26.0 203 776-984 1-250 (377)
77 cd05589 STKc_PKN Catalytic dom 100.0 4.6E-35 1E-39 333.1 22.6 244 778-1051 1-256 (324)
78 cd07848 STKc_CDKL5 Catalytic d 100.0 2.3E-35 4.9E-40 330.0 19.8 200 776-984 1-203 (287)
79 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.6E-35 1.2E-39 329.4 22.8 201 775-985 4-207 (303)
80 cd05108 PTKc_EGFR Catalytic do 100.0 7.1E-35 1.5E-39 330.6 23.6 260 776-1061 7-273 (316)
81 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.6E-35 7.9E-40 338.3 21.6 255 776-1052 1-285 (350)
82 cd05594 STKc_PKB_alpha Catalyt 100.0 4.1E-35 8.8E-40 333.7 21.7 241 782-1051 1-251 (325)
83 cd05599 STKc_NDR_like Catalyti 100.0 4.4E-35 9.4E-40 339.3 22.3 254 776-1051 1-295 (364)
84 cd05093 PTKc_TrkB Catalytic do 100.0 8.1E-35 1.8E-39 325.6 23.5 261 776-1059 5-282 (288)
85 cd05048 PTKc_Ror Catalytic Dom 100.0 6.9E-35 1.5E-39 325.5 22.8 257 776-1055 5-282 (283)
86 cd05582 STKc_RSK_N N-terminal 100.0 3.2E-35 6.9E-40 333.6 20.2 238 782-1048 2-245 (318)
87 PTZ00267 NIMA-related protein 100.0 3.8E-35 8.2E-40 350.0 21.8 252 777-1051 68-322 (478)
88 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-34 2.3E-39 325.2 24.0 199 776-984 1-211 (290)
89 cd05094 PTKc_TrkC Catalytic do 100.0 9.8E-35 2.1E-39 325.5 23.6 261 776-1059 5-285 (291)
90 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.9E-35 1.3E-39 321.8 21.1 256 775-1056 5-261 (261)
91 PF07714 Pkinase_Tyr: Protein 100.0 3E-35 6.6E-40 323.3 18.6 250 780-1053 3-259 (259)
92 KOG4279 Serine/threonine prote 100.0 1.3E-35 2.9E-40 328.9 15.6 244 783-1051 582-831 (1226)
93 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-34 2.7E-39 329.8 24.2 242 782-1046 1-250 (329)
94 cd05049 PTKc_Trk Catalytic dom 100.0 7.9E-35 1.7E-39 324.5 22.0 256 776-1054 5-279 (280)
95 KOG4278 Protein tyrosine kinas 100.0 7.8E-36 1.7E-40 326.8 13.5 256 777-1058 268-525 (1157)
96 cd05592 STKc_nPKC_theta_delta 100.0 9.9E-35 2.1E-39 328.8 23.1 240 782-1050 1-246 (316)
97 cd05591 STKc_nPKC_epsilon Cata 100.0 9.3E-35 2E-39 330.1 22.9 241 782-1051 1-253 (321)
98 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-34 2.9E-39 329.7 24.2 247 782-1051 1-261 (329)
99 cd05052 PTKc_Abl Catalytic dom 100.0 1.5E-34 3.3E-39 318.9 23.8 254 777-1056 7-262 (263)
100 cd05054 PTKc_VEGFR Catalytic d 100.0 4.9E-35 1.1E-39 333.9 20.5 261 776-1058 7-335 (337)
101 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-34 2.8E-39 329.3 23.8 237 782-1047 1-242 (323)
102 cd06650 PKc_MEK1 Catalytic dom 100.0 8.4E-35 1.8E-39 331.8 22.3 198 776-984 5-204 (333)
103 cd05590 STKc_nPKC_eta Catalyti 100.0 8.4E-35 1.8E-39 330.0 21.9 237 782-1047 1-242 (320)
104 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-34 2.5E-39 318.4 22.3 252 776-1054 4-256 (256)
105 cd05601 STKc_CRIK Catalytic do 100.0 9E-35 2E-39 331.9 22.1 252 776-1051 1-262 (330)
106 cd05068 PTKc_Frk_like Catalyti 100.0 1.5E-34 3.2E-39 318.6 23.1 255 775-1055 5-260 (261)
107 cd08228 STKc_Nek6 Catalytic do 100.0 1.4E-34 3.1E-39 320.0 22.9 260 776-1057 2-266 (267)
108 cd05605 STKc_GRK4_like Catalyt 100.0 1.2E-34 2.5E-39 323.6 22.4 251 777-1051 1-260 (285)
109 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-34 3.6E-39 328.2 23.9 237 782-1047 1-242 (321)
110 PLN00034 mitogen-activated pro 100.0 8.7E-35 1.9E-39 334.9 21.9 248 776-1052 74-328 (353)
111 KOG0658 Glycogen synthase kina 100.0 1.1E-35 2.3E-40 313.2 12.9 270 776-1059 24-315 (364)
112 cd05062 PTKc_IGF-1R Catalytic 100.0 1.1E-34 2.5E-39 322.6 21.8 259 774-1055 4-277 (277)
113 KOG0444 Cytoskeletal regulator 100.0 1.8E-37 3.8E-42 340.1 -0.8 367 76-453 9-380 (1255)
114 PTZ00283 serine/threonine prot 100.0 7.1E-35 1.5E-39 347.4 21.5 257 773-1052 29-297 (496)
115 cd05621 STKc_ROCK2 Catalytic d 100.0 1.7E-34 3.7E-39 333.2 23.7 201 774-984 41-249 (370)
116 cd05033 PTKc_EphR Catalytic do 100.0 2.6E-34 5.7E-39 317.6 24.3 256 776-1056 4-265 (266)
117 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.2E-35 1.8E-39 333.8 20.8 200 777-984 1-210 (338)
118 cd05596 STKc_ROCK Catalytic do 100.0 1.4E-34 3E-39 334.4 22.7 253 775-1052 42-304 (370)
119 KOG0444 Cytoskeletal regulator 100.0 2.2E-37 4.8E-42 339.3 -0.7 365 97-542 6-373 (1255)
120 cd05620 STKc_nPKC_delta Cataly 100.0 1.5E-34 3.3E-39 327.3 22.4 240 782-1050 1-246 (316)
121 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-34 2.7E-39 329.5 21.7 241 777-1046 1-246 (324)
122 cd05090 PTKc_Ror1 Catalytic do 100.0 2.1E-34 4.5E-39 321.5 23.1 257 776-1055 5-282 (283)
123 cd05625 STKc_LATS1 Catalytic d 100.0 1E-34 2.2E-39 338.2 21.0 202 777-984 2-250 (382)
124 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.8E-34 8.3E-39 315.2 24.2 253 776-1055 6-259 (260)
125 cd05598 STKc_LATS Catalytic do 100.0 8.6E-35 1.9E-39 338.2 20.0 202 777-984 2-246 (376)
126 cd05604 STKc_SGK3 Catalytic do 100.0 1.6E-34 3.5E-39 328.8 21.7 240 782-1050 1-245 (325)
127 KOG4257 Focal adhesion tyrosin 100.0 4E-35 8.6E-40 322.4 15.9 257 775-1058 388-651 (974)
128 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.8E-34 3.9E-39 322.0 21.6 266 777-1057 5-282 (283)
129 PRK13184 pknD serine/threonine 100.0 1.3E-34 2.8E-39 351.7 22.0 265 776-1059 2-293 (932)
130 cd05608 STKc_GRK1 Catalytic do 100.0 1.9E-34 4.1E-39 321.0 21.5 246 784-1051 1-256 (280)
131 cd05619 STKc_nPKC_theta Cataly 100.0 2.3E-34 4.9E-39 325.7 22.4 241 782-1051 1-247 (316)
132 cd05616 STKc_cPKC_beta Catalyt 100.0 2.4E-34 5.2E-39 327.0 22.6 241 777-1046 1-246 (323)
133 cd05570 STKc_PKC Catalytic dom 100.0 2.1E-34 4.6E-39 326.6 21.8 241 782-1051 1-251 (318)
134 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4E-34 8.8E-39 319.4 23.7 263 776-1056 4-283 (284)
135 cd05111 PTK_HER3 Pseudokinase 100.0 5E-34 1.1E-38 317.6 24.2 259 776-1060 7-272 (279)
136 PHA03212 serine/threonine kina 100.0 1.3E-34 2.9E-39 335.8 19.9 194 775-984 91-285 (391)
137 cd05059 PTKc_Tec_like Catalyti 100.0 4E-34 8.6E-39 314.2 22.5 250 777-1053 5-255 (256)
138 cd05045 PTKc_RET Catalytic dom 100.0 4.4E-34 9.5E-39 320.1 23.2 259 777-1058 1-288 (290)
139 cd08229 STKc_Nek7 Catalytic do 100.0 3E-34 6.4E-39 317.4 21.5 260 776-1057 2-266 (267)
140 cd05092 PTKc_TrkA Catalytic do 100.0 3.8E-34 8.3E-39 318.8 22.5 256 776-1054 5-279 (280)
141 cd05091 PTKc_Ror2 Catalytic do 100.0 2.4E-34 5.2E-39 321.1 20.9 256 777-1055 6-282 (283)
142 cd05602 STKc_SGK1 Catalytic do 100.0 3.1E-34 6.7E-39 326.5 22.2 240 782-1050 1-245 (325)
143 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.7E-34 1.5E-38 313.2 24.2 253 776-1055 6-259 (260)
144 cd05097 PTKc_DDR_like Catalyti 100.0 3.4E-34 7.4E-39 321.7 22.2 263 776-1054 5-294 (295)
145 cd05095 PTKc_DDR2 Catalytic do 100.0 5E-34 1.1E-38 320.6 23.5 264 776-1055 5-296 (296)
146 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.8E-34 6E-39 332.9 22.0 262 774-1057 35-400 (401)
147 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 7.4E-34 1.6E-38 314.2 24.4 260 776-1057 2-266 (267)
148 cd05071 PTKc_Src Catalytic dom 100.0 5.1E-34 1.1E-38 314.4 23.0 254 776-1056 6-260 (262)
149 cd05053 PTKc_FGFR Catalytic do 100.0 6E-34 1.3E-38 319.6 23.9 261 774-1057 10-292 (293)
150 cd05051 PTKc_DDR Catalytic dom 100.0 6.2E-34 1.3E-38 320.0 23.7 264 775-1054 4-295 (296)
151 cd05035 PTKc_Axl_like Catalyti 100.0 8.6E-34 1.9E-38 314.8 24.5 256 778-1056 1-272 (273)
152 KOG0199 ACK and related non-re 100.0 7.3E-35 1.6E-39 324.3 15.3 254 777-1054 111-370 (1039)
153 cd05622 STKc_ROCK1 Catalytic d 100.0 4.3E-34 9.4E-39 330.2 22.4 254 774-1052 41-304 (371)
154 KOG0610 Putative serine/threon 100.0 1.3E-34 2.7E-39 307.6 16.3 255 776-1051 77-391 (459)
155 KOG0032 Ca2+/calmodulin-depend 100.0 3.8E-34 8.2E-39 323.1 21.3 251 774-1051 33-292 (382)
156 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.8E-34 1.3E-38 324.2 23.1 243 782-1047 1-249 (327)
157 cd05089 PTKc_Tie1 Catalytic do 100.0 6.2E-34 1.3E-38 319.9 23.0 259 776-1060 2-279 (297)
158 cd06654 STKc_PAK1 Catalytic do 100.0 4.4E-34 9.5E-39 320.7 21.8 255 770-1051 14-269 (296)
159 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.7E-34 2.1E-38 323.8 24.9 262 776-1060 12-297 (334)
160 cd05607 STKc_GRK7 Catalytic do 100.0 4.3E-34 9.4E-39 317.6 21.3 245 784-1051 1-249 (277)
161 cd05055 PTKc_PDGFR Catalytic d 100.0 6.7E-34 1.4E-38 320.2 23.1 258 776-1056 35-301 (302)
162 cd05597 STKc_DMPK_like Catalyt 100.0 1.6E-33 3.5E-38 321.1 26.4 257 776-1052 1-266 (331)
163 KOG0574 STE20-like serine/thre 100.0 2.2E-36 4.9E-41 305.3 2.5 247 777-1051 34-282 (502)
164 cd05084 PTKc_Fes Catalytic dom 100.0 5.8E-34 1.2E-38 312.2 21.7 248 782-1054 1-251 (252)
165 cd05075 PTKc_Axl Catalytic dom 100.0 8.9E-34 1.9E-38 314.5 23.4 256 778-1056 1-271 (272)
166 cd06646 STKc_MAP4K5 Catalytic 100.0 4.3E-34 9.4E-39 316.1 20.8 253 776-1052 9-265 (267)
167 cd05116 PTKc_Syk Catalytic dom 100.0 8.3E-34 1.8E-38 311.9 22.8 247 783-1055 2-254 (257)
168 cd05101 PTKc_FGFR2 Catalytic d 100.0 7E-34 1.5E-38 320.7 22.8 262 775-1059 14-299 (304)
169 cd05082 PTKc_Csk Catalytic dom 100.0 1.1E-33 2.4E-38 310.7 23.7 249 776-1056 6-256 (256)
170 PTZ00036 glycogen synthase kin 100.0 2.8E-34 6.1E-39 338.5 20.1 197 775-984 65-273 (440)
171 cd05043 PTK_Ryk Pseudokinase d 100.0 6.9E-34 1.5E-38 316.9 22.2 261 775-1058 5-278 (280)
172 KOG1025 Epidermal growth facto 100.0 7.2E-35 1.6E-39 329.9 14.2 256 778-1059 698-960 (1177)
173 cd05615 STKc_cPKC_alpha Cataly 100.0 7E-34 1.5E-38 322.9 22.6 241 777-1046 1-246 (323)
174 cd05069 PTKc_Yes Catalytic dom 100.0 1.3E-33 2.8E-38 310.9 23.8 253 776-1055 6-259 (260)
175 PTZ00266 NIMA-related protein 100.0 8E-34 1.7E-38 345.9 24.1 254 775-1051 12-294 (1021)
176 cd05061 PTKc_InsR Catalytic do 100.0 1.1E-33 2.3E-38 316.6 23.1 260 775-1057 5-279 (288)
177 KOG0577 Serine/threonine prote 100.0 1.1E-34 2.4E-39 317.1 14.5 243 777-1051 27-277 (948)
178 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.2E-34 1.6E-38 321.0 21.9 261 776-1059 18-302 (307)
179 cd05115 PTKc_Zap-70 Catalytic 100.0 1.7E-33 3.6E-38 309.3 24.2 249 783-1056 2-255 (257)
180 cd08529 STKc_FA2-like Catalyti 100.0 1.2E-33 2.6E-38 310.4 23.1 249 777-1051 1-252 (256)
181 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-33 3.9E-38 314.1 24.6 263 776-1056 4-283 (284)
182 cd05632 STKc_GRK5 Catalytic do 100.0 1.5E-33 3.2E-38 314.7 23.9 250 778-1051 2-260 (285)
183 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.2E-34 2E-38 315.2 22.0 257 775-1054 5-276 (277)
184 cd05042 PTKc_Aatyk Catalytic d 100.0 1.1E-33 2.5E-38 313.1 22.6 252 783-1053 2-267 (269)
185 cd05032 PTKc_InsR_like Catalyt 100.0 1E-33 2.2E-38 314.9 22.3 256 776-1054 6-276 (277)
186 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-33 2.8E-38 312.7 22.9 254 782-1054 1-268 (269)
187 cd05088 PTKc_Tie2 Catalytic do 100.0 1.3E-33 2.9E-38 318.0 23.3 259 776-1060 7-284 (303)
188 cd05034 PTKc_Src_like Catalyti 100.0 1.7E-33 3.8E-38 310.1 23.5 255 775-1055 5-260 (261)
189 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.4E-33 3.1E-38 312.2 22.8 257 776-1056 5-267 (268)
190 cd05109 PTKc_HER2 Catalytic do 100.0 1.5E-33 3.3E-38 313.9 23.0 259 776-1060 7-272 (279)
191 cd05066 PTKc_EphR_A Catalytic 100.0 1.6E-33 3.4E-38 311.6 22.9 257 776-1056 4-266 (267)
192 cd05040 PTKc_Ack_like Catalyti 100.0 1.5E-33 3.2E-38 309.9 22.6 250 782-1054 1-256 (257)
193 KOG0599 Phosphorylase kinase g 100.0 1E-34 2.2E-39 290.2 11.9 252 774-1051 15-282 (411)
194 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.8E-34 1.9E-38 325.0 21.5 261 776-1058 7-341 (343)
195 cd06619 PKc_MKK5 Catalytic dom 100.0 1E-33 2.2E-38 315.1 21.4 247 777-1052 2-253 (279)
196 cd08219 STKc_Nek3 Catalytic do 100.0 1.7E-33 3.6E-38 309.1 22.6 250 777-1052 1-252 (255)
197 cd05065 PTKc_EphR_B Catalytic 100.0 1.9E-33 4E-38 311.4 23.0 257 777-1056 5-268 (269)
198 cd00192 PTKc Catalytic domain 100.0 2.2E-33 4.8E-38 309.2 23.4 250 782-1054 1-262 (262)
199 cd05623 STKc_MRCK_alpha Cataly 100.0 3.2E-33 7E-38 319.0 25.5 257 776-1052 1-266 (332)
200 cd05058 PTKc_Met_Ron Catalytic 100.0 2E-33 4.4E-38 309.8 22.9 254 782-1058 1-261 (262)
201 cd05627 STKc_NDR2 Catalytic do 100.0 9.1E-34 2E-38 327.4 20.9 202 777-984 2-238 (360)
202 cd05050 PTKc_Musk Catalytic do 100.0 1.6E-33 3.5E-38 315.2 22.2 258 775-1055 4-288 (288)
203 cd05624 STKc_MRCK_beta Catalyt 100.0 2.9E-33 6.3E-38 319.0 24.7 201 776-984 1-210 (331)
204 cd05630 STKc_GRK6 Catalytic do 100.0 1.4E-33 3E-38 314.8 21.5 250 778-1051 2-260 (285)
205 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-33 2.5E-38 319.7 21.1 199 776-984 6-207 (309)
206 cd05085 PTKc_Fer Catalytic dom 100.0 3.1E-33 6.6E-38 306.0 23.5 247 782-1054 1-249 (250)
207 cd06625 STKc_MEKK3_like Cataly 100.0 2.6E-33 5.6E-38 309.1 23.1 253 776-1052 2-260 (263)
208 cd05039 PTKc_Csk_like Catalyti 100.0 2.5E-33 5.4E-38 307.9 22.8 249 776-1055 6-255 (256)
209 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-33 3.3E-38 325.5 22.0 197 774-984 19-224 (359)
210 cd05073 PTKc_Hck Catalytic dom 100.0 4.5E-33 9.8E-38 306.6 24.3 253 776-1055 6-259 (260)
211 KOG0579 Ste20-like serine/thre 100.0 4.7E-35 1E-39 321.2 8.2 251 776-1051 32-288 (1187)
212 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.8E-33 1E-37 307.7 24.4 251 777-1051 1-263 (267)
213 cd06615 PKc_MEK Catalytic doma 100.0 2E-33 4.3E-38 317.3 21.8 197 777-984 2-200 (308)
214 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2E-33 4.3E-38 309.6 21.1 239 782-1053 1-261 (262)
215 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.9E-33 8.6E-38 316.0 24.2 261 776-1059 12-296 (314)
216 KOG4717 Serine/threonine prote 100.0 3.2E-34 7E-39 308.6 14.3 250 773-1051 15-269 (864)
217 cd06645 STKc_MAP4K3 Catalytic 100.0 1.4E-33 2.9E-38 312.1 19.8 252 776-1051 9-264 (267)
218 cd07853 STKc_NLK Catalytic dom 100.0 2.1E-33 4.5E-38 325.9 22.2 199 777-985 1-208 (372)
219 cd06655 STKc_PAK2 Catalytic do 100.0 2E-33 4.4E-38 315.2 21.4 253 772-1051 15-268 (296)
220 KOG0596 Dual specificity; seri 100.0 6.2E-34 1.3E-38 311.1 16.4 253 774-1051 359-626 (677)
221 cd06624 STKc_ASK Catalytic dom 100.0 3.4E-33 7.3E-38 309.2 22.6 255 774-1051 6-264 (268)
222 cd07863 STKc_CDK4 Catalytic do 100.0 4.2E-33 9.1E-38 311.9 23.5 198 777-984 1-209 (288)
223 cd05056 PTKc_FAK Catalytic dom 100.0 4.1E-33 9E-38 308.8 23.1 257 776-1059 6-268 (270)
224 cd07874 STKc_JNK3 Catalytic do 100.0 1.9E-33 4.2E-38 324.2 21.2 197 774-984 15-220 (355)
225 cd06637 STKc_TNIK Catalytic do 100.0 1.4E-33 2.9E-38 313.0 19.1 253 773-1051 3-268 (272)
226 cd06643 STKc_SLK Catalytic dom 100.0 3.7E-33 8E-38 311.3 22.6 249 778-1051 7-261 (282)
227 cd06656 STKc_PAK3 Catalytic do 100.0 1.7E-33 3.7E-38 316.2 19.9 253 772-1051 15-268 (297)
228 cd07875 STKc_JNK1 Catalytic do 100.0 2.4E-33 5.2E-38 324.5 21.8 197 774-984 22-227 (364)
229 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.7E-33 8E-38 308.7 22.3 252 783-1053 2-266 (268)
230 cd06631 STKc_YSK4 Catalytic do 100.0 4.1E-33 8.8E-38 307.9 22.6 253 777-1051 1-261 (265)
231 PHA03207 serine/threonine kina 100.0 1.9E-33 4.1E-38 327.9 20.9 197 775-985 91-290 (392)
232 cd07861 STKc_CDK1_euk Catalyti 100.0 3.6E-33 7.8E-38 312.0 22.3 200 777-984 1-204 (285)
233 cd05047 PTKc_Tie Catalytic dom 100.0 6E-33 1.3E-37 307.4 23.9 250 782-1057 1-269 (270)
234 cd05060 PTKc_Syk_like Catalyti 100.0 6.5E-33 1.4E-37 304.8 24.0 250 782-1057 1-256 (257)
235 cd07868 STKc_CDK8 Catalytic do 100.0 3.2E-33 7E-38 317.4 22.2 197 781-984 6-218 (317)
236 cd05112 PTKc_Itk Catalytic dom 100.0 5.1E-33 1.1E-37 305.5 22.6 250 777-1053 5-255 (256)
237 KOG0690 Serine/threonine prote 100.0 3.5E-34 7.5E-39 292.7 12.2 248 775-1051 167-423 (516)
238 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.3E-33 7.1E-38 312.4 21.4 252 777-1051 2-261 (286)
239 PF00069 Pkinase: Protein kina 100.0 8.5E-34 1.8E-38 312.3 16.4 252 778-1051 1-256 (260)
240 PHA03211 serine/threonine kina 100.0 2.7E-33 5.8E-38 328.2 21.6 193 776-982 169-362 (461)
241 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.9E-33 1.5E-37 306.4 23.5 259 776-1051 1-263 (267)
242 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.2E-33 1.1E-37 310.4 22.7 263 776-1056 4-283 (284)
243 cd06611 STKc_SLK_like Catalyti 100.0 2.6E-33 5.7E-38 312.2 20.2 251 776-1051 5-261 (280)
244 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.1E-33 4.6E-38 313.5 19.5 255 776-1054 5-268 (284)
245 cd05586 STKc_Sck1_like Catalyt 100.0 2.6E-33 5.6E-38 319.7 20.5 240 784-1051 1-252 (330)
246 cd06630 STKc_MEKK1 Catalytic d 100.0 4.5E-33 9.7E-38 308.1 21.7 255 777-1051 1-263 (268)
247 cd06644 STKc_STK10_LOK Catalyt 100.0 5.6E-33 1.2E-37 311.5 22.6 251 776-1051 12-268 (292)
248 cd05057 PTKc_EGFR_like Catalyt 100.0 8.9E-33 1.9E-37 307.7 24.0 259 776-1060 7-272 (279)
249 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.2E-33 6.8E-38 321.0 20.5 198 772-984 11-218 (343)
250 cd08221 STKc_Nek9 Catalytic do 100.0 9.4E-33 2E-37 303.4 23.2 250 777-1052 1-253 (256)
251 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.9E-33 6.3E-38 310.4 19.2 238 783-1053 2-273 (274)
252 KOG0584 Serine/threonine prote 100.0 6.3E-34 1.4E-38 317.9 13.7 245 779-1051 43-295 (632)
253 cd05046 PTK_CCK4 Pseudokinase 100.0 7.9E-33 1.7E-37 307.5 22.6 256 776-1054 5-274 (275)
254 KOG4645 MAPKKK (MAP kinase kin 100.0 4E-35 8.8E-40 348.4 4.2 262 767-1051 1226-1493(1509)
255 cd06658 STKc_PAK5 Catalytic do 100.0 2.5E-33 5.5E-38 313.8 18.2 250 776-1052 22-272 (292)
256 cd05110 PTKc_HER4 Catalytic do 100.0 8.3E-33 1.8E-37 311.6 22.6 259 776-1060 7-272 (303)
257 cd06612 STKc_MST1_2 Catalytic 100.0 5.2E-33 1.1E-37 305.3 20.4 249 776-1051 3-252 (256)
258 cd05083 PTKc_Chk Catalytic dom 100.0 9E-33 1.9E-37 303.1 22.0 247 776-1055 6-253 (254)
259 cd06651 STKc_MEKK3 Catalytic d 100.0 1.2E-32 2.6E-37 304.3 23.1 251 776-1051 2-260 (266)
260 cd06609 STKc_MST3_like Catalyt 100.0 8.5E-33 1.8E-37 307.0 21.9 246 777-1051 2-250 (274)
261 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.8E-33 6E-38 311.4 18.0 247 777-1052 5-253 (277)
262 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.5E-33 1.8E-37 311.4 22.2 199 776-984 6-207 (301)
263 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-32 2.5E-37 302.8 22.7 249 777-1051 1-253 (257)
264 cd08218 STKc_Nek1 Catalytic do 100.0 1.1E-32 2.5E-37 302.7 22.6 249 777-1051 1-252 (256)
265 cd06605 PKc_MAPKK Catalytic do 100.0 4.9E-33 1.1E-37 307.3 19.6 251 777-1051 2-256 (265)
266 PHA03209 serine/threonine kina 100.0 2.5E-33 5.4E-38 322.8 17.9 192 774-982 64-256 (357)
267 cd06613 STKc_MAP4K3_like Catal 100.0 7.3E-33 1.6E-37 305.3 20.8 253 776-1051 3-259 (262)
268 cd08227 PK_STRAD_alpha Pseudok 100.0 4.9E-33 1.1E-37 317.0 20.0 201 780-984 2-212 (327)
269 KOG4250 TANK binding protein k 100.0 1.3E-33 2.8E-38 319.0 14.7 200 777-984 14-226 (732)
270 KOG0667 Dual-specificity tyros 100.0 4.9E-33 1.1E-37 314.5 18.9 195 777-984 187-390 (586)
271 cd06638 STKc_myosinIIIA Cataly 100.0 1.1E-32 2.4E-37 308.1 21.7 259 770-1052 12-283 (286)
272 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.4E-32 3.1E-37 307.3 22.5 199 776-984 1-203 (286)
273 KOG0986 G protein-coupled rece 100.0 1E-33 2.2E-38 302.1 12.0 246 775-1044 184-433 (591)
274 cd05041 PTKc_Fes_like Catalyti 100.0 2.1E-32 4.6E-37 299.6 22.9 248 782-1054 1-250 (251)
275 cd06632 STKc_MEKK1_plant Catal 100.0 2.1E-32 4.6E-37 300.8 22.9 247 777-1051 1-254 (258)
276 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-32 2.5E-37 312.9 21.4 197 781-984 6-218 (317)
277 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.3E-32 4.9E-37 303.2 23.0 254 777-1051 2-268 (272)
278 cd08528 STKc_Nek10 Catalytic d 100.0 1.7E-32 3.6E-37 303.8 21.7 254 777-1054 1-268 (269)
279 smart00219 TyrKc Tyrosine kina 100.0 2.8E-32 6E-37 299.8 23.2 251 778-1053 1-258 (258)
280 cd06640 STKc_MST4 Catalytic do 100.0 1E-32 2.2E-37 306.8 19.9 247 777-1052 5-253 (277)
281 cd06626 STKc_MEKK4 Catalytic d 100.0 2.2E-32 4.7E-37 301.9 22.3 252 777-1051 1-260 (264)
282 cd06652 STKc_MEKK2 Catalytic d 100.0 2.3E-32 4.9E-37 301.9 22.5 251 776-1051 2-260 (265)
283 cd05574 STKc_phototropin_like 100.0 1.9E-32 4.2E-37 310.9 22.2 255 776-1051 1-288 (316)
284 KOG0983 Mitogen-activated prot 100.0 1.4E-33 3.1E-38 282.4 11.2 249 778-1051 94-348 (391)
285 PTZ00284 protein kinase; Provi 100.0 6.7E-33 1.5E-37 330.8 19.2 197 773-984 126-347 (467)
286 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-32 2.7E-37 309.1 20.1 248 778-1052 23-271 (297)
287 cd05044 PTKc_c-ros Catalytic d 100.0 1.7E-32 3.6E-37 303.8 20.9 250 782-1054 1-268 (269)
288 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.8E-33 8.2E-38 306.8 15.5 239 782-1053 1-257 (258)
289 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.4E-32 7.3E-37 302.0 23.1 256 778-1056 1-272 (273)
290 cd05580 STKc_PKA Catalytic dom 100.0 2.4E-32 5.3E-37 305.9 22.1 244 776-1051 1-253 (290)
291 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-32 3.1E-37 302.4 19.8 237 782-1053 1-258 (259)
292 cd07844 STKc_PCTAIRE_like Cata 100.0 2.2E-32 4.8E-37 306.5 21.4 199 776-984 5-206 (291)
293 cd05609 STKc_MAST Catalytic do 100.0 2.5E-32 5.3E-37 308.2 21.6 257 777-1055 2-273 (305)
294 cd08220 STKc_Nek8 Catalytic do 100.0 3.9E-32 8.5E-37 298.4 22.5 248 777-1051 1-252 (256)
295 cd06623 PKc_MAPKK_plant_like C 100.0 5.5E-32 1.2E-36 298.6 23.5 251 777-1052 2-256 (264)
296 cd07839 STKc_CDK5 Catalytic do 100.0 1.4E-32 3E-37 307.0 18.8 197 777-983 1-201 (284)
297 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.7E-32 8E-37 304.0 22.0 259 777-1051 2-265 (287)
298 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.1E-32 4.5E-37 305.3 19.8 254 772-1051 12-278 (282)
299 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.3E-32 7.2E-37 305.1 21.1 202 774-985 3-207 (291)
300 cd06647 STKc_PAK_I Catalytic d 100.0 2.1E-32 4.6E-37 306.6 19.5 254 772-1052 15-269 (293)
301 cd06639 STKc_myosinIIIB Cataly 100.0 4.9E-32 1.1E-36 303.7 22.0 258 770-1051 16-286 (291)
302 cd07832 STKc_CCRK Catalytic do 100.0 3.6E-32 7.8E-37 304.0 20.8 199 777-984 1-203 (286)
303 cd06641 STKc_MST3 Catalytic do 100.0 7.5E-32 1.6E-36 299.9 23.2 247 777-1052 5-253 (277)
304 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.6E-32 3.4E-37 307.0 17.6 199 776-984 1-203 (286)
305 PHA02882 putative serine/threo 100.0 4.3E-32 9.4E-37 304.2 21.0 260 775-1053 11-293 (294)
306 cd07860 STKc_CDK2_3 Catalytic 100.0 3.1E-32 6.6E-37 304.3 19.6 199 777-984 1-203 (284)
307 cd06648 STKc_PAK_II Catalytic 100.0 9.4E-32 2E-36 300.2 23.5 248 777-1051 20-268 (285)
308 cd07841 STKc_CDK7 Catalytic do 100.0 6.3E-32 1.4E-36 304.0 22.2 198 777-984 1-205 (298)
309 cd06608 STKc_myosinIII_like Ca 100.0 4.9E-32 1.1E-36 300.9 21.1 255 773-1051 3-271 (275)
310 cd06917 STKc_NAK1_like Catalyt 100.0 6.6E-32 1.4E-36 300.4 21.8 246 777-1051 2-254 (277)
311 KOG0586 Serine/threonine prote 100.0 1.3E-32 2.9E-37 307.3 15.8 200 774-984 54-257 (596)
312 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.5E-32 1.2E-36 302.1 20.9 251 776-1051 1-260 (283)
313 cd05578 STKc_Yank1 Catalytic d 100.0 4.1E-32 8.8E-37 298.7 19.5 247 777-1050 1-253 (258)
314 cd08217 STKc_Nek2 Catalytic do 100.0 7.4E-32 1.6E-36 297.6 21.6 251 777-1052 1-262 (265)
315 cd06614 STKc_PAK Catalytic dom 100.0 9.2E-32 2E-36 300.7 22.0 254 772-1051 15-269 (286)
316 cd07842 STKc_CDK8_like Catalyt 100.0 7.6E-32 1.6E-36 306.1 21.5 204 777-985 1-219 (316)
317 cd08225 STKc_Nek5 Catalytic do 100.0 7.6E-32 1.6E-36 296.3 20.7 249 777-1051 1-253 (257)
318 cd07836 STKc_Pho85 Catalytic d 100.0 7.7E-32 1.7E-36 301.0 20.7 201 777-985 1-204 (284)
319 cd07833 STKc_CDKL Catalytic do 100.0 5.3E-32 1.2E-36 303.0 19.3 199 777-984 2-204 (288)
320 cd07855 STKc_ERK5 Catalytic do 100.0 7.7E-32 1.7E-36 308.1 20.0 202 776-984 5-214 (334)
321 cd05633 STKc_GRK3 Catalytic do 100.0 1.5E-31 3.3E-36 297.4 21.8 242 783-1052 1-255 (279)
322 cd07849 STKc_ERK1_2_like Catal 100.0 6.9E-32 1.5E-36 308.8 19.3 201 775-984 4-212 (336)
323 cd07865 STKc_CDK9 Catalytic do 100.0 2E-31 4.3E-36 301.8 22.7 209 770-984 6-226 (310)
324 cd05122 PKc_STE Catalytic doma 100.0 3.1E-31 6.8E-36 290.2 23.4 249 777-1051 1-250 (253)
325 cd07843 STKc_CDC2L1 Catalytic 100.0 1.6E-31 3.4E-36 299.9 21.4 199 776-984 5-209 (293)
326 cd06616 PKc_MKK4 Catalytic dom 100.0 1E-31 2.2E-36 300.8 19.6 254 777-1052 5-267 (288)
327 KOG1035 eIF-2alpha kinase GCN2 100.0 7.6E-33 1.6E-37 327.9 10.6 255 775-1051 478-870 (1351)
328 cd06657 STKc_PAK4 Catalytic do 100.0 1.5E-31 3.3E-36 299.3 20.4 244 781-1051 25-269 (292)
329 cd06607 STKc_TAO Catalytic dom 100.0 2.3E-31 4.9E-36 300.6 21.8 248 774-1052 13-267 (307)
330 cd06653 STKc_MEKK3_like_1 Cata 100.0 4E-31 8.7E-36 291.8 23.3 251 776-1051 2-260 (264)
331 cd07837 STKc_CdkB_plant Cataly 100.0 2.7E-31 5.8E-36 298.4 22.1 201 776-984 1-214 (295)
332 KOG0666 Cyclin C-dependent kin 100.0 2.2E-32 4.7E-37 278.6 11.7 273 775-1052 23-337 (438)
333 cd07845 STKc_CDK10 Catalytic d 100.0 2.8E-31 6E-36 300.3 22.1 200 775-984 6-211 (309)
334 PHA03390 pk1 serine/threonine- 100.0 3.3E-31 7.1E-36 292.7 22.1 247 771-1051 9-261 (267)
335 KOG1006 Mitogen-activated prot 100.0 1.3E-33 2.9E-38 281.8 2.5 252 780-1051 68-326 (361)
336 cd07835 STKc_CDK1_like Catalyt 100.0 1.8E-31 3.9E-36 297.8 19.9 198 778-984 1-202 (283)
337 cd07850 STKc_JNK Catalytic dom 100.0 2.4E-31 5.2E-36 306.4 21.2 197 774-984 14-219 (353)
338 cd06627 STKc_Cdc7_like Catalyt 100.0 4.9E-31 1.1E-35 289.2 22.7 247 777-1051 1-250 (254)
339 cd06606 STKc_MAPKKK Catalytic 100.0 5.7E-31 1.2E-35 289.4 23.2 251 777-1051 1-256 (260)
340 cd05572 STKc_cGK_PKG Catalytic 100.0 3.4E-31 7.4E-36 292.0 21.3 242 784-1051 1-251 (262)
341 cd05577 STKc_GRK Catalytic dom 100.0 3.7E-31 8E-36 294.3 21.6 244 784-1051 1-253 (277)
342 PLN00009 cyclin-dependent kina 100.0 4.8E-31 1E-35 296.2 22.7 200 776-984 2-206 (294)
343 cd05613 STKc_MSK1_N N-terminal 100.0 4.2E-31 9.1E-36 296.0 21.5 251 777-1051 1-267 (290)
344 KOG0607 MAP kinase-interacting 100.0 2.6E-32 5.6E-37 278.9 10.4 198 782-985 84-294 (463)
345 cd05579 STKc_MAST_like Catalyt 100.0 2.3E-31 5.1E-36 293.7 19.1 248 784-1054 1-256 (265)
346 cd08216 PK_STRAD Pseudokinase 100.0 2.8E-31 6E-36 301.2 20.0 201 779-984 5-212 (314)
347 cd06635 STKc_TAO1 Catalytic do 100.0 7.1E-31 1.5E-35 297.8 23.2 251 776-1057 25-282 (317)
348 cd07864 STKc_CDK12 Catalytic d 100.0 7.1E-31 1.5E-35 296.1 22.8 202 774-984 5-220 (302)
349 KOG0612 Rho-associated, coiled 100.0 2.4E-32 5.1E-37 321.0 10.7 218 771-1002 70-296 (1317)
350 cd05606 STKc_beta_ARK Catalyti 100.0 8E-31 1.7E-35 291.5 22.6 241 783-1051 1-254 (278)
351 KOG0662 Cyclin-dependent kinas 100.0 1.4E-31 3E-36 251.7 13.7 223 777-1014 3-230 (292)
352 cd08215 STKc_Nek Catalytic dom 100.0 9.6E-31 2.1E-35 287.4 22.8 250 777-1051 1-254 (258)
353 cd05583 STKc_MSK_N N-terminal 100.0 4.2E-31 9.1E-36 295.7 20.3 255 777-1055 1-266 (288)
354 KOG1151 Tousled-like protein k 100.0 7.3E-32 1.6E-36 285.6 13.0 258 776-1050 463-739 (775)
355 cd07840 STKc_CDK9_like Catalyt 100.0 5.8E-31 1.3E-35 294.4 21.1 198 778-984 1-204 (287)
356 cd05611 STKc_Rim15_like Cataly 100.0 6E-31 1.3E-35 289.7 20.8 243 782-1053 2-249 (260)
357 cd07852 STKc_MAPK15 Catalytic 100.0 5.6E-31 1.2E-35 301.5 20.9 203 774-984 5-215 (337)
358 PHA03210 serine/threonine kina 100.0 1.9E-31 4.1E-36 319.1 17.5 201 774-982 146-368 (501)
359 cd05118 STKc_CMGC Catalytic do 100.0 6E-31 1.3E-35 293.6 20.3 197 778-984 1-201 (283)
360 cd07831 STKc_MOK Catalytic dom 100.0 1.1E-30 2.4E-35 291.3 22.4 195 778-984 1-201 (282)
361 KOG0200 Fibroblast/platelet-de 100.0 5.3E-31 1.1E-35 319.6 21.1 260 777-1057 297-580 (609)
362 cd06618 PKc_MKK7 Catalytic dom 100.0 9.8E-31 2.1E-35 293.9 21.6 253 775-1052 14-273 (296)
363 cd08530 STKc_CNK2-like Catalyt 100.0 6.7E-31 1.5E-35 288.5 19.6 248 777-1051 1-252 (256)
364 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6E-31 1.3E-35 301.1 19.8 199 775-984 4-211 (337)
365 cd08226 PK_STRAD_beta Pseudoki 100.0 9.1E-31 2E-35 298.5 21.0 199 782-984 4-212 (328)
366 cd07838 STKc_CDK4_6_like Catal 100.0 1.9E-30 4.1E-35 290.3 23.0 197 778-984 1-208 (287)
367 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.5E-31 1.2E-35 301.9 19.0 201 775-984 4-221 (342)
368 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.6E-31 2.1E-35 300.1 20.6 200 770-984 11-220 (345)
369 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.4E-30 3E-35 298.5 21.7 200 770-984 9-218 (343)
370 cd07834 STKc_MAPK Catalytic do 100.0 8.3E-31 1.8E-35 299.4 19.8 200 777-984 1-209 (330)
371 cd05581 STKc_PDK1 Catalytic do 100.0 9.2E-31 2E-35 291.6 18.8 251 776-1051 1-276 (280)
372 cd06634 STKc_TAO2 Catalytic do 100.0 2.4E-30 5.2E-35 292.2 22.2 247 776-1053 15-268 (308)
373 KOG4236 Serine/threonine prote 100.0 2.1E-31 4.6E-36 287.6 12.7 194 781-984 569-768 (888)
374 cd07857 STKc_MPK1 Catalytic do 100.0 2E-30 4.3E-35 296.3 21.4 201 777-984 1-212 (332)
375 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-30 2.6E-35 299.0 19.7 194 775-984 14-217 (342)
376 KOG0604 MAP kinase-activated p 100.0 9.2E-32 2E-36 273.1 8.7 254 774-1052 59-322 (400)
377 cd08222 STKc_Nek11 Catalytic d 100.0 1.6E-30 3.4E-35 286.4 19.3 249 777-1051 1-256 (260)
378 cd07866 STKc_BUR1 Catalytic do 100.0 2E-30 4.3E-35 293.8 20.4 204 775-984 7-229 (311)
379 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-30 2.7E-35 296.8 18.5 197 773-984 7-208 (328)
380 cd07830 STKc_MAK_like Catalyti 100.0 2.5E-30 5.3E-35 288.7 20.2 197 778-984 1-201 (283)
381 PTZ00024 cyclin-dependent prot 100.0 2.8E-30 6E-35 295.6 21.1 202 776-984 8-236 (335)
382 cd05610 STKc_MASTL Catalytic d 100.0 2.8E-30 6.1E-35 318.5 22.4 145 776-926 4-152 (669)
383 cd07829 STKc_CDK_like Catalyti 100.0 2.4E-30 5.1E-35 288.7 19.6 197 778-984 1-201 (282)
384 cd06633 STKc_TAO3 Catalytic do 100.0 6.1E-30 1.3E-34 289.5 22.9 243 778-1051 23-272 (313)
385 cd07851 STKc_p38 Catalytic dom 100.0 1.8E-30 3.9E-35 297.8 17.5 197 773-984 12-218 (343)
386 KOG1024 Receptor-like protein 100.0 1.6E-30 3.4E-35 272.5 14.8 265 770-1057 278-556 (563)
387 KOG0669 Cyclin T-dependent kin 100.0 7.2E-32 1.6E-36 267.0 2.9 203 776-984 17-231 (376)
388 KOG0587 Traf2- and Nck-interac 100.0 3.9E-30 8.4E-35 296.1 17.4 253 772-1051 15-281 (953)
389 KOG0696 Serine/threonine prote 100.0 7.4E-31 1.6E-35 275.9 10.5 199 776-984 349-552 (683)
390 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-29 2.6E-34 277.6 19.9 236 784-1048 1-240 (250)
391 KOG0603 Ribosomal protein S6 k 100.0 3E-30 6.5E-35 290.1 13.4 239 775-1051 321-562 (612)
392 KOG0984 Mitogen-activated prot 100.0 2.4E-30 5.3E-35 249.4 9.2 214 776-1001 46-267 (282)
393 cd05576 STKc_RPK118_like Catal 100.0 1.3E-29 2.8E-34 274.6 16.0 221 787-1048 4-225 (237)
394 KOG0614 cGMP-dependent protein 100.0 5.4E-31 1.2E-35 284.2 3.9 199 776-985 420-622 (732)
395 KOG0608 Warts/lats-like serine 100.0 1.2E-29 2.6E-34 279.6 13.6 208 776-989 629-878 (1034)
396 KOG0695 Serine/threonine prote 100.0 1.4E-29 3E-34 259.6 13.1 200 775-984 249-453 (593)
397 PLN03225 Serine/threonine-prot 100.0 9.8E-29 2.1E-33 296.8 17.9 200 774-983 130-380 (566)
398 PLN03224 probable serine/threo 100.0 2.1E-28 4.6E-33 285.6 20.0 203 775-983 144-434 (507)
399 KOG0671 LAMMER dual specificit 100.0 3.5E-29 7.6E-34 263.9 10.6 197 775-984 88-311 (415)
400 smart00220 S_TKc Serine/Threon 100.0 1.1E-27 2.3E-32 260.3 20.8 238 788-1051 1-240 (244)
401 KOG1027 Serine/threonine prote 100.0 4.3E-29 9.3E-34 286.3 8.0 247 778-1051 511-766 (903)
402 KOG1345 Serine/threonine kinas 99.9 1.1E-27 2.5E-32 240.1 13.1 253 774-1052 22-284 (378)
403 KOG0668 Casein kinase II, alph 99.9 2.5E-28 5.4E-33 238.8 8.1 203 774-993 36-244 (338)
404 KOG0664 Nemo-like MAPK-related 99.9 1.2E-28 2.6E-33 246.5 3.3 198 780-987 57-263 (449)
405 KOG1290 Serine/threonine prote 99.9 3E-27 6.6E-32 255.4 13.7 150 756-912 58-222 (590)
406 KOG1152 Signal transduction se 99.9 8.6E-28 1.9E-32 263.7 8.3 196 776-983 561-770 (772)
407 KOG0576 Mitogen-activated prot 99.9 9.7E-28 2.1E-32 267.8 8.8 253 774-1050 13-269 (829)
408 cd00180 PKc Catalytic domain o 99.9 2.9E-25 6.2E-30 235.3 19.0 210 784-1052 1-214 (215)
409 smart00221 STYKc Protein kinas 99.9 2.8E-25 6.2E-30 238.4 17.9 199 778-984 1-202 (225)
410 KOG1165 Casein kinase (serine/ 99.9 4.4E-25 9.5E-30 227.8 15.1 264 776-1058 28-301 (449)
411 KOG4237 Extracellular matrix p 99.9 1.9E-27 4.2E-32 250.6 -2.6 386 268-661 68-498 (498)
412 KOG1167 Serine/threonine prote 99.9 4.5E-25 9.8E-30 236.6 14.2 208 770-988 30-284 (418)
413 KOG0665 Jun-N-terminal kinase 99.9 2.1E-25 4.6E-30 230.0 10.1 195 775-984 16-219 (369)
414 KOG1163 Casein kinase (serine/ 99.9 3.7E-25 7.9E-30 218.5 11.3 264 775-1058 14-286 (341)
415 KOG4237 Extracellular matrix p 99.9 2.4E-26 5.1E-31 242.4 1.8 421 76-541 69-498 (498)
416 KOG0670 U4/U6-associated splic 99.9 3.3E-25 7.1E-30 240.3 9.5 199 776-985 432-638 (752)
417 PLN03210 Resistant to P. syrin 99.9 3.9E-24 8.5E-29 278.8 19.4 337 93-470 553-904 (1153)
418 KOG1164 Casein kinase (serine/ 99.9 3.5E-23 7.5E-28 233.9 22.5 265 777-1060 19-301 (322)
419 PLN03210 Resistant to P. syrin 99.9 1.4E-23 3.1E-28 273.6 20.4 316 162-494 580-904 (1153)
420 PLN00181 protein SPA1-RELATED; 99.9 8.2E-24 1.8E-28 268.1 9.5 198 828-1051 28-264 (793)
421 PRK09188 serine/threonine prot 99.9 7.9E-23 1.7E-27 229.0 15.3 177 773-966 15-210 (365)
422 smart00750 KIND kinase non-cat 99.9 3.2E-22 7E-27 206.0 12.9 171 857-1058 1-171 (176)
423 PRK15387 E3 ubiquitin-protein 99.9 2.8E-22 6E-27 241.8 13.4 261 293-646 203-463 (788)
424 KOG0195 Integrin-linked kinase 99.9 6.4E-23 1.4E-27 205.5 6.5 251 778-1057 192-447 (448)
425 PRK15387 E3 ubiquitin-protein 99.9 1E-21 2.2E-26 236.9 15.7 264 268-599 202-465 (788)
426 PRK15370 E3 ubiquitin-protein 99.9 3.3E-21 7.2E-26 234.4 16.0 247 122-424 178-428 (754)
427 PRK15370 E3 ubiquitin-protein 99.8 6.4E-21 1.4E-25 232.0 10.8 159 245-424 180-338 (754)
428 COG0515 SPS1 Serine/threonine 99.8 1.9E-19 4.2E-24 205.6 22.5 202 778-984 2-213 (384)
429 PRK10359 lipopolysaccharide co 99.8 1.1E-20 2.3E-25 196.5 10.4 171 774-976 29-216 (232)
430 cd05147 RIO1_euk RIO kinase fa 99.8 3.5E-20 7.6E-25 191.4 12.1 140 781-929 2-168 (190)
431 KOG0590 Checkpoint kinase and 99.8 2.1E-21 4.6E-26 232.1 3.1 255 779-1051 321-584 (601)
432 cd05145 RIO1_like RIO kinase f 99.8 3.6E-19 7.9E-24 184.9 14.6 140 781-930 2-169 (190)
433 PRK12274 serine/threonine prot 99.8 3.2E-19 6.9E-24 180.8 12.2 188 779-984 5-209 (218)
434 KOG0617 Ras suppressor protein 99.8 1.7E-20 3.6E-25 176.2 -1.1 164 118-311 29-192 (264)
435 KOG1240 Protein kinase contain 99.8 1.6E-19 3.4E-24 212.9 5.8 249 777-1052 24-291 (1431)
436 KOG0603 Ribosomal protein S6 k 99.8 2.6E-19 5.6E-24 202.4 5.6 185 784-984 2-193 (612)
437 KOG0617 Ras suppressor protein 99.8 2.6E-20 5.7E-25 174.8 -3.3 166 94-290 29-195 (264)
438 PRK10345 hypothetical protein; 99.7 9.6E-18 2.1E-22 174.5 13.9 137 779-926 5-157 (210)
439 PF14531 Kinase-like: Kinase-l 99.7 1.4E-18 3E-23 186.2 6.8 201 774-985 10-253 (288)
440 KOG1023 Natriuretic peptide re 99.7 4E-17 8.7E-22 185.8 14.9 219 826-1059 1-227 (484)
441 cd00116 LRR_RI Leucine-rich re 99.7 1.2E-19 2.7E-24 206.1 -7.5 88 479-566 217-318 (319)
442 smart00090 RIO RIO-like kinase 99.7 5.1E-17 1.1E-21 173.7 12.8 143 776-929 28-199 (237)
443 KOG4158 BRPK/PTEN-induced prot 99.7 2.2E-17 4.8E-22 174.8 9.2 199 830-1053 274-511 (598)
444 KOG1166 Mitotic checkpoint ser 99.7 2.6E-17 5.6E-22 199.8 11.1 196 774-980 696-901 (974)
445 cd00116 LRR_RI Leucine-rich re 99.7 3E-19 6.4E-24 203.1 -6.0 139 261-399 159-319 (319)
446 cd05144 RIO2_C RIO kinase fami 99.7 2.2E-16 4.7E-21 165.6 12.8 141 774-930 13-177 (198)
447 PRK14879 serine/threonine prot 99.7 2.3E-16 4.9E-21 167.6 12.9 134 782-927 2-143 (211)
448 PRK09605 bifunctional UGMP fam 99.7 7.6E-16 1.6E-20 186.2 16.1 137 776-928 333-477 (535)
449 PLN03150 hypothetical protein; 99.7 2E-16 4.4E-21 192.7 11.0 152 29-182 368-527 (623)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 5.1E-16 1.1E-20 163.2 11.9 130 783-927 1-138 (199)
451 KOG1033 eIF-2alpha kinase PEK/ 99.6 7.1E-17 1.5E-21 179.4 3.4 126 846-977 330-457 (516)
452 KOG0606 Microtubule-associated 99.6 4.4E-16 9.4E-21 184.5 7.6 167 776-985 83-261 (1205)
453 cd05119 RIO RIO kinase family, 99.6 9E-15 2E-19 152.1 12.1 137 781-930 2-166 (187)
454 cd05120 APH_ChoK_like Aminogly 99.6 1.7E-14 3.8E-19 144.1 12.8 136 780-928 2-139 (155)
455 PRK01723 3-deoxy-D-manno-octul 99.6 2.3E-14 5E-19 153.7 13.4 136 781-928 36-192 (239)
456 KOG0590 Checkpoint kinase and 99.5 3.3E-15 7.3E-20 179.1 0.9 257 776-1051 20-285 (601)
457 KOG0532 Leucine-rich repeat (L 99.5 5.7E-15 1.2E-19 163.7 -1.3 213 102-374 54-271 (722)
458 KOG0532 Leucine-rich repeat (L 99.4 1.6E-14 3.4E-19 160.3 0.7 176 95-304 72-247 (722)
459 TIGR01982 UbiB 2-polyprenylphe 99.4 9.8E-13 2.1E-17 153.4 11.5 145 776-929 118-308 (437)
460 COG4886 Leucine-rich repeat (L 99.4 9.4E-13 2E-17 154.1 9.0 180 339-526 116-296 (394)
461 PLN03150 hypothetical protein; 99.3 6E-13 1.3E-17 162.5 6.0 115 580-695 419-538 (623)
462 COG4886 Leucine-rich repeat (L 99.3 1.9E-12 4.2E-17 151.5 8.6 148 271-424 97-245 (394)
463 KOG1266 Protein kinase [Signal 99.3 4.2E-12 9E-17 132.4 7.2 156 824-981 119-281 (458)
464 cd05151 ChoK Choline Kinase (C 99.2 2.3E-11 4.9E-16 124.3 9.3 130 782-927 4-136 (170)
465 PRK04750 ubiB putative ubiquin 99.2 2.3E-11 5E-16 143.0 10.1 147 773-930 117-316 (537)
466 KOG0601 Cyclin-dependent kinas 99.2 2E-11 4.4E-16 139.4 9.1 201 776-983 114-328 (524)
467 cd05146 RIO3_euk RIO kinase fa 99.2 3.3E-10 7.3E-15 115.7 14.4 136 782-929 3-175 (197)
468 KOG1243 Protein kinase [Genera 99.1 3.3E-10 7.2E-15 130.3 14.1 168 796-979 33-200 (690)
469 KOG1259 Nischarin, modulator o 99.1 7.9E-12 1.7E-16 128.3 0.7 127 435-567 284-411 (490)
470 KOG0531 Protein phosphatase 1, 99.1 1.6E-11 3.5E-16 143.7 3.1 219 386-617 71-290 (414)
471 cd05154 ACAD10_11_like Acyl-Co 99.1 8.8E-10 1.9E-14 118.0 12.8 142 782-927 4-206 (223)
472 KOG0601 Cyclin-dependent kinas 99.1 1.3E-10 2.8E-15 132.8 6.1 246 775-1055 264-517 (524)
473 COG3642 Mn2+-dependent serine/ 99.1 8.6E-10 1.9E-14 107.9 10.5 132 782-928 2-141 (204)
474 KOG0531 Protein phosphatase 1, 99.0 6.1E-11 1.3E-15 138.9 2.8 226 287-525 91-323 (414)
475 KOG1259 Nischarin, modulator o 99.0 3.1E-11 6.7E-16 124.0 0.1 131 410-546 283-414 (490)
476 KOG4658 Apoptotic ATPase [Sign 99.0 8.8E-11 1.9E-15 146.1 3.2 231 142-378 567-809 (889)
477 KOG4658 Apoptotic ATPase [Sign 99.0 6.4E-11 1.4E-15 147.3 2.0 280 114-402 516-809 (889)
478 PF14580 LRR_9: Leucine-rich r 99.0 1.7E-10 3.6E-15 115.5 4.1 122 508-657 20-146 (175)
479 KOG3207 Beta-tubulin folding c 99.0 6.1E-11 1.3E-15 128.6 0.2 192 311-521 142-340 (505)
480 PF14580 LRR_9: Leucine-rich r 99.0 2.5E-10 5.3E-15 114.3 4.0 125 457-586 17-147 (175)
481 KOG3087 Serine/threonine prote 99.0 3.1E-09 6.7E-14 103.1 11.0 143 780-927 11-165 (229)
482 KOG1909 Ran GTPase-activating 99.0 3E-11 6.5E-16 127.7 -3.6 133 531-664 157-311 (382)
483 KOG3207 Beta-tubulin folding c 99.0 9.9E-11 2.2E-15 127.0 0.2 214 241-473 119-340 (505)
484 KOG1909 Ran GTPase-activating 98.9 1.5E-10 3.2E-15 122.6 -0.3 224 286-520 25-283 (382)
485 PF01163 RIO1: RIO1 family; I 98.9 1.2E-08 2.6E-13 104.1 11.6 126 791-929 1-157 (188)
486 KOG0606 Microtubule-associated 98.8 1.5E-09 3.3E-14 129.9 4.3 205 775-985 803-1038(1205)
487 PF08263 LRRNT_2: Leucine rich 98.8 3.3E-09 7.2E-14 79.7 3.5 40 32-71 2-43 (43)
488 PRK15123 lipopolysaccharide co 98.8 5.4E-08 1.2E-12 105.5 13.0 141 782-927 28-194 (268)
489 COG4248 Uncharacterized protei 98.8 3.3E-07 7.1E-12 99.7 17.9 195 778-985 13-225 (637)
490 COG0478 RIO-like serine/threon 98.7 8.6E-08 1.9E-12 99.7 10.5 136 778-928 93-252 (304)
491 PF13855 LRR_8: Leucine rich r 98.6 2.3E-08 4.9E-13 82.3 3.3 58 461-518 3-60 (61)
492 PF13855 LRR_8: Leucine rich r 98.6 2.4E-08 5.1E-13 82.2 3.1 15 575-589 45-59 (61)
493 KOG1859 Leucine-rich repeat pr 98.6 2.4E-09 5.2E-14 122.5 -4.8 127 484-617 165-292 (1096)
494 KOG3741 Poly(A) ribonuclease s 98.5 5.2E-07 1.1E-11 100.9 11.6 167 790-980 290-474 (655)
495 COG0661 AarF Predicted unusual 98.5 5E-07 1.1E-11 106.0 9.8 141 782-930 131-317 (517)
496 PRK09902 hypothetical protein; 98.4 2.9E-06 6.2E-11 86.9 13.2 140 784-928 26-180 (216)
497 PF06293 Kdo: Lipopolysacchari 98.4 1.2E-06 2.7E-11 92.0 10.9 107 816-928 55-171 (206)
498 KOG1859 Leucine-rich repeat pr 98.4 7.1E-09 1.5E-13 118.8 -6.6 127 508-665 165-293 (1096)
499 KOG4579 Leucine-rich repeat (L 98.4 2.1E-08 4.5E-13 92.2 -2.4 125 559-687 31-159 (177)
500 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 3.4E-06 7.4E-11 89.7 13.0 133 782-927 7-182 (226)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.3e-115 Score=1135.50 Aligned_cols=917 Identities=35% Similarity=0.591 Sum_probs=708.7
Q ss_pred chhHHHHHHHHHhhccCCCCCCCCCCCCCCCCcceeeEEecCCCcEEEEecccccccCcCCccccccccCCeEeccCCCC
Q 001238 31 VNRQGEALLSWKRNWKGSDDGLSNWSPSDETPCKWFGVSCNLNNQVVGLDLRYVDLLGHVPTNFTSLLSLNRLVLSGTNL 110 (1117)
Q Consensus 31 ~~~~~~aLl~~k~~~~~~~~~l~sW~~~~~~~C~W~gv~C~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l 110 (1117)
.+.|+.||++||+++.++...+++|... .+||.|.||+|+..++|+.++|.++++.|.+|..|..+++|+.|+|++|++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~-~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~ 105 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSS-ADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQL 105 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCC-CCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCcc
Confidence 3578999999999998776778999753 579999999998778999999999988888888888899999999999999
Q ss_pred CCCchhhhc-ccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCcEEeccCCCCCCCCccc
Q 001238 111 TGSIPKEIA-SLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQLFLYDNQLTDAIPAT 189 (1117)
Q Consensus 111 ~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~ 189 (1117)
+|.+|..+. ++++|++|||++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..
T Consensus 106 ~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 183 (968)
T PLN00113 106 SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS 183 (968)
T ss_pred CCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChh
Confidence 888887765 888999999999988887775 45778888888888888788888888888888888888877666665
Q ss_pred ccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeecccccccccCCcCCCCCCCC
Q 001238 190 IGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTALLSGQIPPELGDCTEL 269 (1117)
Q Consensus 190 ~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~l~~l~~L 269 (1117)
++++++|++|++++| .+.+.+|..++.+++|
T Consensus 184 ~~~l~~L~~L~L~~n-------------------------------------------------~l~~~~p~~l~~l~~L 214 (968)
T PLN00113 184 LTNLTSLEFLTLASN-------------------------------------------------QLVGQIPRELGQMKSL 214 (968)
T ss_pred hhhCcCCCeeeccCC-------------------------------------------------CCcCcCChHHcCcCCc
Confidence 555555554444443 3334566667777888
Q ss_pred cEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCCCcceEecccc
Q 001238 270 QYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVN 349 (1117)
Q Consensus 270 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N 349 (1117)
++|+|++|++++.+|..|+++++|++|++++|++.+.+|..|+++++|+.|+|++|.+++.+|..+.++++|++|+|++|
T Consensus 215 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 294 (968)
T PLN00113 215 KWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN 294 (968)
T ss_pred cEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCC
Confidence 88889888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCCcccccceeecccccccCCCcc
Q 001238 350 QISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPR 429 (1117)
Q Consensus 350 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 429 (1117)
.+.+.+|..+.++++|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|+|++|++++.+|.
T Consensus 295 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~ 374 (968)
T PLN00113 295 SLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPE 374 (968)
T ss_pred eeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCCh
Confidence 88888888888888888888888888888888888888888888888888777777777777788888888877777777
Q ss_pred cccCCCCCCeeeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCC
Q 001238 430 GIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNL 509 (1117)
Q Consensus 430 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 509 (1117)
.+..+.+|+.|++++|++.+.+|..+..+++|+.|++++|++++.+|..|.++++|+.|++++|++++.+|..+..+++|
T Consensus 375 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 454 (968)
T PLN00113 375 GLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSL 454 (968)
T ss_pred hHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCC
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777666677777
Q ss_pred ceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCCCccccEEeccccccCCCCCcccccccceeEEecccc
Q 001238 510 TFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDLSSN 589 (1117)
Q Consensus 510 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 589 (1117)
+.|+|++|++.+.+|..+ ...+|+.|++++|++.+..|..|..+++|+.|+|++|
T Consensus 455 ~~L~L~~n~~~~~~p~~~-------------------------~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 509 (968)
T PLN00113 455 QMLSLARNKFFGGLPDSF-------------------------GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSEN 509 (968)
T ss_pred cEEECcCceeeeecCccc-------------------------ccccceEEECcCCccCCccChhhhhhhccCEEECcCC
Confidence 777777777766555432 2356777788888887778888888888888888888
Q ss_pred ccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEeccCccccCCcch-hhhcccceEEEeecccccCCCC
Q 001238 590 QLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDLSHNELSGDLHF-LAELQNLVVLNVSHNNFSGRVP 668 (1117)
Q Consensus 590 ~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~-l~~l~~L~~L~ls~N~l~~~~p 668 (1117)
++++.+|..+..+++| +.|+|++|.+++.+|..|..+++|+.|||++|++++.+|. +..+++|+.|++++|+++|.+|
T Consensus 510 ~l~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 510 KLSGEIPDELSSCKKL-VSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred cceeeCChHHcCccCC-CEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 8888888888888887 7888888888888999999999999999999999997776 8889999999999999999999
Q ss_pred CCcccccCCcccccCCCCCCcCC-----CCCCCCccccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhheeccccCCC
Q 001238 669 DTPFFAKLPLSVLSGNPSLCFSG-----NQCADSTYKKDGASRHAGAARVAMVVLLSAACALLLAALYIILGPRIRGLSG 743 (1117)
Q Consensus 669 ~~~~~~~~~~~~~~gN~~~c~~~-----~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (1117)
..+++.++...++.|||.+||.. ++|.... . .......+++++++++++++++++ ++++++| ++...
T Consensus 589 ~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~ 660 (968)
T PLN00113 589 STGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR----K--TPSWWFYITCTLGAFLVLALVAFG-FVFIRGR-NNLEL 660 (968)
T ss_pred CcchhcccChhhhcCCccccCCccccCCCCCcccc----c--cceeeeehhHHHHHHHHHHHHHHH-HHHHHhh-hcccc
Confidence 99999999999999999999863 3453210 1 111111122222222222222222 2222222 21111
Q ss_pred CCCCCCCCccccCCCccchhhc---cchhhHHHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHH
Q 001238 744 SHHNEGDEDVEMGPPWELTLYN---KLDLSIGDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAF 819 (1117)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~ 819 (1117)
+....++.. ++...+. .......+....|+..+.||+|+||.||+|.. .+|+.||||+++.... ..
T Consensus 661 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~ 730 (968)
T PLN00113 661 KRVENEDGT------WELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IP 730 (968)
T ss_pred ccccccccc------ccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----cc
Confidence 111100000 1110000 01123445556788889999999999999985 5789999999864332 22
Q ss_pred HHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCce
Q 001238 820 SSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAI 899 (1117)
Q Consensus 820 ~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 899 (1117)
.+|++.+++++|||||+++++|.+++..++||||+++|+|.++++. ++|.++.+++.|+|+|++|||..+.++|
T Consensus 731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~i 804 (968)
T PLN00113 731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAV 804 (968)
T ss_pred HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 4578999999999999999999999999999999999999999963 7899999999999999999997666699
Q ss_pred eeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCC
Q 001238 900 LHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGK 979 (1117)
Q Consensus 900 vHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~ 979 (1117)
+||||||+||+++.++.+++. ||.+..... .....+|++|+|||++.+..++.++|||||||++|||++|+
T Consensus 805 iH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~ 875 (968)
T PLN00113 805 VVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT--------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGK 875 (968)
T ss_pred ecCCCCHHhEEECCCCceEEE-ecccccccc--------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCC
Confidence 999999999999999888775 665543321 12236889999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 980 KPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 980 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
.||+..........+|++..... ......+++.+.........++.+..+++..||+.+|++||+|+||++.|+++.+.
T Consensus 876 ~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 876 SPADAEFGVHGSIVEWARYCYSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred CCCCcccCCCCcHHHHHHHhcCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 99976655566677777654332 23344556666554444455666777889999999999999999999999987653
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.1e-61 Score=629.03 Aligned_cols=514 Identities=37% Similarity=0.608 Sum_probs=370.6
Q ss_pred ccCCeEeccCCCCCCCchhhhcccccCcEeeccCCCcCCCCchhhh-hhhhhhhhhccCCCcCCCCchhccCCcCCcEEe
Q 001238 98 LSLNRLVLSGTNLTGSIPKEIASLNQLNYLDLSENSLTGEIPRELC-SLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQLF 176 (1117)
Q Consensus 98 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~ 176 (1117)
.+++.|+|++|+++|.+|..|..+++|++|||++|+++|.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 3678899999999999999999999999999999999888887765 788888888888888877774 5577788888
Q ss_pred ccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeeccccccc
Q 001238 177 LYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTALLS 256 (1117)
Q Consensus 177 L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~l~ 256 (1117)
|++|++++.+|..++.+++|++|++++| .+.
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n-------------------------------------------------~l~ 177 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGN-------------------------------------------------VLV 177 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccC-------------------------------------------------ccc
Confidence 8888777655554444443333333332 233
Q ss_pred ccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccC
Q 001238 257 GQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLG 336 (1117)
Q Consensus 257 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~ 336 (1117)
+.+|..+.++++|++|+|++|.+++.+|..++++++|++|+|++|++.+.+|..++++++|++|+|++|.+++.+|..++
T Consensus 178 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 257 (968)
T PLN00113 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG 257 (968)
T ss_pred ccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh
Confidence 34555566666677777777777766777777777777777777777766676677777777777777777666666666
Q ss_pred CCCCcceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCCccccccee
Q 001238 337 NLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAV 416 (1117)
Q Consensus 337 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 416 (1117)
++++|++|+|++|.+.+.+|..+.++++|++|++++|.+.+.+|..+.++++|+.|++++|.+++.+|..+..+++|+.|
T Consensus 258 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 337 (968)
T PLN00113 258 NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVL 337 (968)
T ss_pred CCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEE
Confidence 66677777777666666666666666666666666666666555555555555555555555554444444444455555
Q ss_pred ecccccccCCCcccccCCCCCCeeeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCC
Q 001238 417 DLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLT 496 (1117)
Q Consensus 417 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 496 (1117)
+|++ |++.+.+|..++.+++|+.|++++|++++.+|..+..+++|+.|++++|++.
T Consensus 338 ~L~~------------------------n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~ 393 (968)
T PLN00113 338 QLWS------------------------NKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLE 393 (968)
T ss_pred ECcC------------------------CCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEec
Confidence 5544 4444444555555555555555555555555555555556666666666666
Q ss_pred CCCCcccccCCCCceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCCCccccEEeccccccCCCCCcccc
Q 001238 497 GSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNRFAGSIPSQLG 576 (1117)
Q Consensus 497 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 576 (1117)
+.+|..+..+++|+.|++++|++++.+|..|..++.|+.|++++|.+.+..+..+..+++|+.|+|++|++.+.+|..+.
T Consensus 394 ~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~ 473 (968)
T PLN00113 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG 473 (968)
T ss_pred ccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc
Confidence 66666666666666666666666666666666666666666666666666666666777888888888888888887664
Q ss_pred cccceeEEeccccccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEeccCccccCCcch-hhhcccceE
Q 001238 577 SCVKLQLLDLSSNQLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDLSHNELSGDLHF-LAELQNLVV 655 (1117)
Q Consensus 577 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~-l~~l~~L~~ 655 (1117)
..+|+.||+++|++++.+|..+..++++ +.|+|++|++++.+|..+..+++|++|||++|++++.+|. +..+++|+.
T Consensus 474 -~~~L~~L~ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 551 (968)
T PLN00113 474 -SKRLENLDLSRNQFSGAVPRKLGSLSEL-MQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQ 551 (968)
T ss_pred -cccceEEECcCCccCCccChhhhhhhcc-CEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCE
Confidence 5899999999999999999999999998 7999999999999999999999999999999999997765 889999999
Q ss_pred EEeecccccCCCCCC-cccccCCcccccCCCCCC
Q 001238 656 LNVSHNNFSGRVPDT-PFFAKLPLSVLSGNPSLC 688 (1117)
Q Consensus 656 L~ls~N~l~~~~p~~-~~~~~~~~~~~~gN~~~c 688 (1117)
|||++|+++|.+|.. ..+..+....+++|+..+
T Consensus 552 L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 552 LDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred EECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 999999999999974 346677888899998775
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-48 Score=440.75 Aligned_cols=291 Identities=43% Similarity=0.755 Sum_probs=248.6
Q ss_pred CccchhhccchhhHHHhccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceE
Q 001238 758 PWELTLYNKLDLSIGDATRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRL 837 (1117)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 837 (1117)
+...+.|+ ++..+|++|...++||+|+||.||+|...+|+.||||++.........+|.+|++++.+++|||+|++
T Consensus 61 ~~~~fs~~----el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 61 PLRSFSYD----ELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKL 136 (361)
T ss_pred CcceeeHH----HHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccE
Confidence 44556666 88999999999999999999999999999999999998876543314569999999999999999999
Q ss_pred EeeeecCC-ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc
Q 001238 838 LGWGANRK-TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE 916 (1117)
Q Consensus 838 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~ 916 (1117)
+|||.+.+ +.++|||||++|+|.++++..... .++|.+|++||.++|+||+|||+.+.|.||||||||+|||+|++++
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 99999999 599999999999999999986543 6899999999999999999999999889999999999999999999
Q ss_pred ceeccccccccccC-CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCC-CChhHHH
Q 001238 917 SCLADFGLARLVED-DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFP-DGQHVIQ 994 (1117)
Q Consensus 917 ~kl~DfGla~~~~~-~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~-~~~~~~~ 994 (1117)
+||+|||+|+.... .. ...+...||.+|+|||++..+..+.|+|||||||++.|+++|+.|.+...+ ....+..
T Consensus 216 aKlsDFGLa~~~~~~~~----~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~ 291 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEGDT----SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVE 291 (361)
T ss_pred EEccCccCcccCCcccc----ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHH
Confidence 99999999976543 11 111111799999999999999999999999999999999999999876442 3445888
Q ss_pred HHHHHHhcCCCCccccCcccC-CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 995 WVRDHLKSKKDPVEVLDPKLQ-GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
|+...+... ...+.+|+.+. +.... ..++.+.+.++..|++.+|.+||+|.+|+++|+.+...
T Consensus 292 w~~~~~~~~-~~~eiiD~~l~~~~~~~-~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 292 WAKPLLEEG-KLREIVDPRLKEGEYPD-EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHHCc-chhheeCCCccCCCCCh-HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 887777665 78899999987 44332 26677778899999999999999999999999665543
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-44 Score=399.47 Aligned_cols=259 Identities=33% Similarity=0.526 Sum_probs=211.8
Q ss_pred CCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccc--hHHHHHHHHHHhccCCCCcceEEeeeecCC-ceEEEEEec
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKIS--TGAFSSEIATLSRIRHRNIVRLLGWGANRK-TKLLFYDYM 854 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~ 854 (1117)
+.+.+.+|+|+||+||+|.+.....||||++...+... .++|.+|+.++.+++|||||+++|+|.+.. ..++||||+
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 44456699999999999999554459999998653222 458999999999999999999999999987 799999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCc-eeeeccccCeEEEcCCC-cceeccccccccccCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPA-ILHRDVKSHNILLGERY-ESCLADFGLARLVEDDS 932 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivHrDlkp~Nill~~~~-~~kl~DfGla~~~~~~~ 932 (1117)
++|+|.++++.. ..+.+++..++++|.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 999999999874 235599999999999999999999999 7 99999999999999997 99999999998765421
Q ss_pred CCccccCCccccccccCChhhhc--cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYAN--MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
...+...||++|||||++. ...|+.|+||||||+++|||+||+.||....+ .+.+........
T Consensus 199 ----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----~~~~~~v~~~~~------ 263 (362)
T KOG0192|consen 199 ----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----VQVASAVVVGGL------ 263 (362)
T ss_pred ----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcCC------
Confidence 2333468999999999999 67999999999999999999999999975322 222222222221
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEPA 1061 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~ 1061 (1117)
.|.++...+..+..+++. ||+.||++||++.+++..|+.+.....
T Consensus 264 Rp~~p~~~~~~l~~l~~~------CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 264 RPPIPKECPPHLSSLMER------CWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CCCCCccCCHHHHHHHHH------hCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 133344355566666655 999999999999999999998876544
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-44 Score=379.78 Aligned_cols=251 Identities=27% Similarity=0.424 Sum_probs=215.2
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecCCc-eEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT-KLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lv~e~ 853 (1117)
+.+..+.||+|..|+||+++++ +++.+|+|++... +....+++.+|++++++.+||+||.+||.|...+. ..++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3455678999999999999864 6889999999543 44456789999999999999999999999999984 9999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHH-DCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|++|+|++++... +.+++....+++.+|++||.|||+ + +||||||||+|||+...|++||||||.++.+...
T Consensus 160 MDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred cCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 9999999999865 459999999999999999999996 5 9999999999999999999999999999987642
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
...+++||..|||||.+++..|+.++||||||++++|+++|+.||....+......+.+..+....+ |
T Consensus 233 -----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp-------P 300 (364)
T KOG0581|consen 233 -----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP-------P 300 (364)
T ss_pred -----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC-------C
Confidence 4457899999999999999999999999999999999999999997643334456666666655432 3
Q ss_pred ccCCC-CchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1013 KLQGH-PDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1013 ~l~~~-~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.++.. ++.+.+.++.. |+++||.+||+++|+++.
T Consensus 301 ~lP~~~fS~ef~~FV~~------CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 301 RLPEGEFSPEFRSFVSC------CLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCcccCCHHHHHHHHH------HhcCCcccCCCHHHHhcC
Confidence 44443 77778888877 999999999999999873
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=376.32 Aligned_cols=199 Identities=33% Similarity=0.468 Sum_probs=179.8
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
..+|.+.+.||+|+||+||+|+++ ++..||||.+... .+...+.+..|+++++.++|||||++++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 456888889999999999999854 5899999999765 4445667889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC------Ccceecccccc
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER------YESCLADFGLA 925 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~------~~~kl~DfGla 925 (1117)
|||.||+|.++++... .+++++++.++.|+|.||++||++ +||||||||+|||++.. -.+||+|||+|
T Consensus 89 EyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999999763 499999999999999999999999 99999999999999864 45799999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
|.+... ....+.+|++-|||||++...+|+.|+|+||+|+++|||++|+.||+.
T Consensus 163 R~L~~~-----~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 163 RFLQPG-----SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhCCch-----hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 998743 234567999999999999999999999999999999999999999975
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=6.9e-47 Score=396.28 Aligned_cols=480 Identities=28% Similarity=0.450 Sum_probs=407.6
Q ss_pred ccccccCCeEeccCCCCCCCchhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCc
Q 001238 94 FTSLLSLNRLVLSGTNLTGSIPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLT 173 (1117)
Q Consensus 94 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ 173 (1117)
...-..++.|++++|.++ .+.+.+.+|..|++|++++|+++ ..|.+++.+..++.|+.++|+++ .+|..++++.+|+
T Consensus 41 wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~ 117 (565)
T KOG0472|consen 41 WWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLV 117 (565)
T ss_pred hhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhh
Confidence 344456778899999998 56667899999999999999998 88999999999999999999998 8999999999999
Q ss_pred EEeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeecccc
Q 001238 174 QLFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTA 253 (1117)
Q Consensus 174 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~ 253 (1117)
.|++++|++. ++|++++.+..|+.++..+|+. .++|..++++.+|..+++.+|.+....|..+. |+.|+.|+...|
T Consensus 118 ~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i--~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N 193 (565)
T KOG0472|consen 118 KLDCSSNELK-ELPDSIGRLLDLEDLDATNNQI--SSLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSN 193 (565)
T ss_pred hhhcccccee-ecCchHHHHhhhhhhhcccccc--ccCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchh
Confidence 9999999998 6899999999999999998876 47899999999999999999999876665555 999999999888
Q ss_pred cccccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCC-CCCCCCEEEcCCCcCCCCCc
Q 001238 254 LLSGQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELG-NCSQLSIIDISMNSLTGSIP 332 (1117)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~LdLs~N~l~~~~p 332 (1117)
.+ +.+|++++.+.+|.-|||..|+|. .+| .|..+..|++|+++.|+|. .+|.+.. ++.+|.+|||..|+++ ..|
T Consensus 194 ~L-~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~P 268 (565)
T KOG0472|consen 194 LL-ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVP 268 (565)
T ss_pred hh-hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCc
Confidence 66 578999999999999999999999 677 7999999999999999998 6666654 8999999999999999 789
Q ss_pred cccCCCCCcceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccccc--cchHHHHh--ccccccc-------
Q 001238 333 QTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNL--SNLTLLFV--WHNRLEG------- 401 (1117)
Q Consensus 333 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L--~~N~l~~------- 401 (1117)
+.++-+++|++||+|+|.|+ ..|..++++ .|+.|.+.+|.+..+-.+.+..- .-|++|.= ..-.++.
T Consensus 269 de~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~ 346 (565)
T KOG0472|consen 269 DEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTET 346 (565)
T ss_pred hHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccc
Confidence 99999999999999999999 677889999 99999999999873222222111 12444432 1111110
Q ss_pred --c-CCC---CCCcccccceeecccccccCCCcccccCCCC---CCeeeccCccCCCCCCCCcccccccceeccCCCccc
Q 001238 402 --E-IPP---SISNCQNLEAVDLSQNGLTGPIPRGIFQLKK---LNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLT 472 (1117)
Q Consensus 402 --~-~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 472 (1117)
. .+. ....+.+.+.|+++.-+++ .+|...+.-.+ ....+++.|++. .+|..+..++.+.+.-..+|+..
T Consensus 347 ~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i 424 (565)
T KOG0472|consen 347 AMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI 424 (565)
T ss_pred cCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc
Confidence 0 111 2234567889999999999 69998887665 889999999998 67888888887776555555555
Q ss_pred ccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCCceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcC
Q 001238 473 GFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLG 552 (1117)
Q Consensus 473 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 552 (1117)
+.+|..++.+++|..|+|++|-+. .+|..++.+..|+.||+|.|++. .+|.....+..|+.+-.++|+|+.+++..+.
T Consensus 425 sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~ 502 (565)
T KOG0472|consen 425 SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLK 502 (565)
T ss_pred ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhh
Confidence 599999999999999999999998 78999999999999999999999 7899999999999999999999999999999
Q ss_pred CCccccEEeccccccCCCCCcccccccceeEEeccccccc
Q 001238 553 SLSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDLSSNQLS 592 (1117)
Q Consensus 553 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 592 (1117)
++.+|..|+|.+|.|. .+|..+++|++|++|++++|.|.
T Consensus 503 nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 503 NMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 9999999999999998 68888999999999999999998
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=6.8e-48 Score=403.83 Aligned_cols=528 Identities=29% Similarity=0.422 Sum_probs=341.2
Q ss_pred eEeccCCCCCCCchhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCcEEeccCCC
Q 001238 102 RLVLSGTNLTGSIPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQLFLYDNQ 181 (1117)
Q Consensus 102 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~N~ 181 (1117)
.|+++++.+. ..|.++.++. ..+|+ -+.+..-..|+.|++++|.++ .+-..+.+|..|.+|++++|+
T Consensus 13 ~lnlsnr~l~-~vp~~vyq~~----------~t~~e-~e~wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~ 79 (565)
T KOG0472|consen 13 SLNLSNRSLK-DVPTEVYQIN----------LTTGE-GENWWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNK 79 (565)
T ss_pred ccccccchhh-hccHHHHHHH----------hhccc-hhhhhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccch
Confidence 4566666665 6777777654 11222 234555667899999999998 666778899999999999999
Q ss_pred CCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeecccccccccCCc
Q 001238 182 LTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTALLSGQIPP 261 (1117)
Q Consensus 182 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~ 261 (1117)
++ ..|++++.+.+++.|+.++|+. ..+|.+++++.+|+.+++++|.+.. +|+.++
T Consensus 80 l~-~lp~aig~l~~l~~l~vs~n~l--s~lp~~i~s~~~l~~l~~s~n~~~e-l~~~i~--------------------- 134 (565)
T KOG0472|consen 80 LS-QLPAAIGELEALKSLNVSHNKL--SELPEQIGSLISLVKLDCSSNELKE-LPDSIG--------------------- 134 (565)
T ss_pred hh-hCCHHHHHHHHHHHhhcccchH--hhccHHHhhhhhhhhhhccccceee-cCchHH---------------------
Confidence 98 6888999999999999999875 4678888888888888888777763 344444
Q ss_pred CCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCCCc
Q 001238 262 ELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLTSL 341 (1117)
Q Consensus 262 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L 341 (1117)
.+..|..|+..+|+++ ..|..++++.+|..|++.+|+++.. |+..-+++.|++||...|.++ .+|..++.+.+|
T Consensus 135 ---~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L 208 (565)
T KOG0472|consen 135 ---RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSNLLE-TLPPELGGLESL 208 (565)
T ss_pred ---HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchhhhh-cCChhhcchhhh
Confidence 4444444444444444 3444444444455555555554422 222222445555555555444 344445555555
Q ss_pred ceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccc-cccchHHHHhccccccccCCCCCCcccccceeeccc
Q 001238 342 QELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFG-NLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQ 420 (1117)
Q Consensus 342 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 420 (1117)
+-|+|.+|+|. ..| .|.+++.|++|+++.|+|. .+|.+.+ +++++..|||.+|++. +.|+.++.+++|+.||+|+
T Consensus 209 ~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSN 284 (565)
T KOG0472|consen 209 ELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSN 284 (565)
T ss_pred HHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccC
Confidence 55555555554 333 4444555555555555554 3333332 4445555555555554 4444455555555555555
Q ss_pred ccccCCCcccccCCCCCCeeeccCccCCCCCCCCccc--ccccceecc-------CCC---c-----ccccCCCCcCCCC
Q 001238 421 NGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPPEMGN--CSSLIRFRA-------NSN---K-----LTGFIPPEIGNLK 483 (1117)
Q Consensus 421 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~l-------~~N---~-----l~~~~~~~~~~l~ 483 (1117)
|.|+ ..|..++++ .|+.|-+.+|.+..+--+.+.. -.-|++|+= +.- + ...........+.
T Consensus 285 N~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i 362 (565)
T KOG0472|consen 285 NDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAII 362 (565)
T ss_pred Cccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhh
Confidence 5554 244444444 4555555555444221111110 001222211 000 0 0001111233456
Q ss_pred CCCEEEccCCcCCCCCCcccccCC---CCceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCCCccccEE
Q 001238 484 NLNFLDLGSNRLTGSIPDEITGCR---NLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKL 560 (1117)
Q Consensus 484 ~L~~L~Ls~N~l~~~~p~~~~~l~---~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 560 (1117)
+.+.|+++.-+++ .+|+...... -.+..+++.|++. .+|..+..+..+...-+..|++.++.+..++.+++|+.|
T Consensus 363 ~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L 440 (565)
T KOG0472|consen 363 TTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFL 440 (565)
T ss_pred hhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceee
Confidence 7899999999999 5666654433 3889999999999 688889988888776555555566778889999999999
Q ss_pred eccccccCCCCCcccccccceeEEeccccccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEeccCccc
Q 001238 561 VLNKNRFAGSIPSQLGSCVKLQLLDLSSNQLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDLSHNEL 640 (1117)
Q Consensus 561 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l 640 (1117)
+|++|.+. .+|..++.+..|+.||+|.|+|. .+|..+..+..+ +.+-.+.|++....|..+.+|.+|.+|||.+|.+
T Consensus 441 ~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~l-Etllas~nqi~~vd~~~l~nm~nL~tLDL~nNdl 517 (565)
T KOG0472|consen 441 DLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTL-ETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDL 517 (565)
T ss_pred ecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHH-HHHHhccccccccChHHhhhhhhcceeccCCCch
Confidence 99999987 68888999999999999999998 899888777666 6677778999988888899999999999999999
Q ss_pred cCCcchhhhcccceEEEeecccccCCCCCCcc-cccCCcccccCCC
Q 001238 641 SGDLHFLAELQNLVVLNVSHNNFSGRVPDTPF-FAKLPLSVLSGNP 685 (1117)
Q Consensus 641 ~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~~~-~~~~~~~~~~gN~ 685 (1117)
...+|.++++++|++|++++|+|+ .+|.... ..+....+|.+++
T Consensus 518 q~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~iLmkgT~aiL~ylrdr 562 (565)
T KOG0472|consen 518 QQIPPILGNMTNLRHLELDGNPFR-QPRHQILMKGTAAILSYLRDR 562 (565)
T ss_pred hhCChhhccccceeEEEecCCccC-CCHHHHhccChHHHHHHhccc
Confidence 999999999999999999999999 3333222 2344444455544
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-43 Score=372.81 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=199.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCC-------ccchHHHHHHHHHHhccCCCCcceEEeeeecCCc
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASD-------KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 846 (1117)
.+.|.+.+.||+|+||.|-+|. .++|+.||||++.+.. ......+++|+++|++++|||||++++++..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3467889999999999999986 5679999999997532 1122346799999999999999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC---Ccceecccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER---YESCLADFG 923 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~DfG 923 (1117)
.|+||||++||+|.+.+-.+. .+.++....+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred eEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccc
Confidence 999999999999999987764 377888899999999999999999 99999999999999765 788999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccCCC---CcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHH
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKI---SEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHL 1000 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~ 1000 (1117)
+|+..... .-..+++||+.|.|||++..+.+ ..++|+||+||++|-+++|.+||.+...+ ..+.+.+.
T Consensus 325 lAK~~g~~-----sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~-~sl~eQI~--- 395 (475)
T KOG0615|consen 325 LAKVSGEG-----SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD-PSLKEQIL--- 395 (475)
T ss_pred hhhccccc-----eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC-ccHHHHHh---
Confidence 99987632 34567899999999999976543 34889999999999999999999764333 22222222
Q ss_pred hcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1001 KSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1001 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+...... |......++... .++.+++..||++||++.|+++
T Consensus 396 ~G~y~f~----p~~w~~Iseea~------dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 396 KGRYAFG----PLQWDRISEEAL------DLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cCccccc----ChhhhhhhHHHH------HHHHHhhEeCcccCcCHHHHhc
Confidence 2221111 111222222333 3445588899999999999987
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-42 Score=385.58 Aligned_cols=247 Identities=24% Similarity=0.391 Sum_probs=211.6
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.+|..++.||+|||+.||+++. .+|+.||+|++.+. .....+.+.+||++.+.|+|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5789999999999999999986 78999999999763 3445677899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|+|+.++|..++++. +.+++.+++.+++||+.||.|||++ +|+|||||..|++++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999999854 4599999999999999999999999 9999999999999999999999999999988754
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
. ....+.+|||.|.|||++....++..+||||+|||+|.|+.|++||+. ..+.+...++.....
T Consensus 172 ~----Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet-----k~vkety~~Ik~~~Y------- 235 (592)
T KOG0575|consen 172 G----ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET-----KTVKETYNKIKLNEY------- 235 (592)
T ss_pred c----cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-----chHHHHHHHHHhcCc-------
Confidence 3 244578999999999999999999999999999999999999999964 234444444333322
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.++.......+++++. .++.+|.+||++++|+.
T Consensus 236 -~~P~~ls~~A~dLI~~------lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 236 -SMPSHLSAEAKDLIRK------LLRPNPSERPSLDEVLD 268 (592)
T ss_pred -ccccccCHHHHHHHHH------HhcCCcccCCCHHHHhc
Confidence 1223444455666665 88999999999999987
No 11
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-42 Score=379.20 Aligned_cols=257 Identities=32% Similarity=0.546 Sum_probs=210.4
Q ss_pred CCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
.++.++.||+|-||+||.|.+.....||+|.++.. ....++|.+|+++|++++|++||+++++|..++..|||||||+.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 35566889999999999999977779999999865 34567899999999999999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.++++... .+.+...+.+.++.|||+|++||+++ ++|||||.++||||+++..+||+|||+||...++ .+
T Consensus 286 GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~---~Y 358 (468)
T KOG0197|consen 286 GSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDD---EY 358 (468)
T ss_pred CcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCC---ce
Confidence 99999999733 34588999999999999999999999 9999999999999999999999999999955433 23
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......-...|.|||.+....++.|||||||||++|||+| |+.||... ...++.+.+. +.... |.-.
T Consensus 359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m--sn~ev~~~le---~GyRl------p~P~ 427 (468)
T KOG0197|consen 359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM--SNEEVLELLE---RGYRL------PRPE 427 (468)
T ss_pred eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC--CHHHHHHHHh---ccCcC------CCCC
Confidence 33344445678999999999999999999999999999999 99998653 2223333333 22211 1212
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
.++ ..+-+++.. ||+.+|++|||++.+...++++...
T Consensus 428 ~CP-~~vY~lM~~------CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 428 GCP-DEVYELMKS------CWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCC-HHHHHHHHH------HhhCCcccCCCHHHHHHHHHHhhhc
Confidence 333 344444444 9999999999999999999887643
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-43 Score=354.97 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=204.2
Q ss_pred CCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEe-eeecCCc-eEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLG-WGANRKT-KLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~-~~lv~ 851 (1117)
.|.+.++||+|.||+||++. ..+|..||.|.+.-. +....+....|+.++++++|||||++++ -+.++.+ .++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 57888999999999999986 678999999988733 3344566888999999999999999998 3444444 78999
Q ss_pred EecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCc--eeeeccccCeEEEcCCCcceeccccccccc
Q 001238 852 DYMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPA--ILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
|||.+|+|...++.- .....+++.++++++.|+++||..+|.+ .|+ |+||||||.||+++.+|.+||+|||+++.+
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999988763 2334699999999999999999999994 235 999999999999999999999999999998
Q ss_pred cCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
... .......+|||.||+||.+.+..|+.|+||||+||++|||+.-+.||.+ ....+..+++.+.+.
T Consensus 179 ~s~----~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g-----~n~~~L~~KI~qgd~---- 245 (375)
T KOG0591|consen 179 SSK----TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYG-----DNLLSLCKKIEQGDY---- 245 (375)
T ss_pred cch----hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccc-----ccHHHHHHHHHcCCC----
Confidence 643 2344578999999999999999999999999999999999999999975 244444444433321
Q ss_pred ccCcccC-CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1009 VLDPKLQ-GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1009 ~~~~~l~-~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
|.++ ..++..+.+++.. |+..||+.||+...+++.+
T Consensus 246 ---~~~p~~~YS~~l~~li~~------ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 246 ---PPLPDEHYSTDLRELINM------CIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred ---CCCcHHHhhhHHHHHHHH------HccCCcccCCCcchHHHHH
Confidence 1222 3344555655555 9999999999854444443
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-42 Score=361.27 Aligned_cols=248 Identities=28% Similarity=0.388 Sum_probs=207.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
.++|++.++||+|+||+||.++.+ +++.+|+|++++.. ..+.+...+|..++.+++||.||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 357899999999999999999754 58899999997653 23456688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
+||+.||.|...+++. +.++++.+.-++.+|+.||.|||++ +|||||+||+|||+|++|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~e---g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE---GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhc---CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 9999999999999875 4489999999999999999999999 999999999999999999999999999996544
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.+ ....+++||+.|||||++....|+.++|.||+|+++|||++|.+||.+ ....++.....+.+.
T Consensus 178 ~~----~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~-----~~~~~~~~~I~~~k~------ 242 (357)
T KOG0598|consen 178 DG----DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA-----EDVKKMYDKILKGKL------ 242 (357)
T ss_pred CC----CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC-----ccHHHHHHHHhcCcC------
Confidence 32 244568999999999999999999999999999999999999999964 345566666655541
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCC----CHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRP----TMKDVA 1050 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP----s~~~v~ 1050 (1117)
+..+...+...+.+++. .+..+|++|- ++.+|.
T Consensus 243 -~~~p~~ls~~ardll~~------LL~rdp~~RLg~~~d~~~ik 279 (357)
T KOG0598|consen 243 -PLPPGYLSEEARDLLKK------LLKRDPRQRLGGPGDAEEIK 279 (357)
T ss_pred -CCCCccCCHHHHHHHHH------HhccCHHHhcCCCCChHHhh
Confidence 12233344455566555 6778999995 455543
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-41 Score=364.80 Aligned_cols=270 Identities=22% Similarity=0.358 Sum_probs=218.0
Q ss_pred ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecC---CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRAS---DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 849 (1117)
.++|..++.||+|+|++||+|+ ..+++.||||++.+. .+...+-+.+|-.+|.+| .||.|++++-.|.++..+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 4578999999999999999997 456899999998653 223345577899999999 89999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
|+||+++|+|.++++.. |.+++..++.++.+|+.||+|||++ |||||||||+|||+|++++++|+|||-|+.+.
T Consensus 152 vLe~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 99999999999999875 5599999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCC---------ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHH
Q 001238 930 DDSGG---------SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHL 1000 (1117)
Q Consensus 930 ~~~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~ 1000 (1117)
+.... .......++||..|.+||++.....++.+|+||||||+|+|+.|++||.+. .....+++++
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~-----NeyliFqkI~ 300 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA-----NEYLIFQKIQ 300 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc-----cHHHHHHHHH
Confidence 54332 111125699999999999999999999999999999999999999999752 2333444444
Q ss_pred hcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH-------HHhhhcCCCCCCCCCCC
Q 001238 1001 KSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL-------LREIRQEPASGSEAHKP 1069 (1117)
Q Consensus 1001 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~-------L~~~~~~~~~~~~~~~~ 1069 (1117)
.... .++..++..+.++++. .+..||.+|++..+|.+. ++.+.+..++.-.+..+
T Consensus 301 ~l~y--------~fp~~fp~~a~dLv~K------LLv~dp~~Rlt~~qIk~HpFF~~Vdw~nlw~~~PP~l~py~p 362 (604)
T KOG0592|consen 301 ALDY--------EFPEGFPEDARDLIKK------LLVRDPSDRLTSQQIKAHPFFEGVDWENLWQQTPPKLQPYKP 362 (604)
T ss_pred Hhcc--------cCCCCCCHHHHHHHHH------HHccCccccccHHHHhhCcccccCChhhhhhcCCCcccCCCC
Confidence 4332 3344455566666666 667799999999988773 34455544444444333
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-40 Score=382.25 Aligned_cols=263 Identities=27% Similarity=0.419 Sum_probs=214.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 848 (1117)
.+....+.||+|+||+||+|+. ++...||||.++..... ..++|++|++++..++|||||+++|.|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 4566678899999999999874 24568999999876555 6788999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcc
Q 001238 849 LFYDYMPNGTLGMLLHDGEC-----------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYES 917 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~ 917 (1117)
+|+|||..|+|.++|....+ .++++..+.+.||.|||.|++||-++ .+|||||..+|+||+++..+
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEE
Confidence 99999999999999975321 23478899999999999999999999 99999999999999999999
Q ss_pred eeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHH
Q 001238 918 CLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 918 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~ 996 (1117)
||+|||++|.+...+ .++....-.-.++|||||.+..++++++|||||||||+||+++ |+.||.+. ..+++.+.+
T Consensus 643 KIsDfGLsRdiYssD--YYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl--Sn~EVIe~i 718 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSD--YYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL--SNQEVIECI 718 (774)
T ss_pred Eecccccchhhhhhh--hhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc--chHHHHHHH
Confidence 999999999876533 2333334455789999999999999999999999999999999 99999753 334455544
Q ss_pred HHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 001238 997 RDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEPA 1061 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~ 1061 (1117)
++ +.- .+. +...+..+.+++. .||+..|.+||+++||...|+...+...
T Consensus 719 ~~----g~l-----L~~-Pe~CP~~vY~LM~------~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 719 RA----GQL-----LSC-PENCPTEVYSLML------ECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred Hc----CCc-----ccC-CCCCCHHHHHHHH------HHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 43 211 112 2233334444443 4999999999999999999998765433
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-40 Score=349.79 Aligned_cols=261 Identities=26% Similarity=0.363 Sum_probs=211.0
Q ss_pred ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
.+.|++.+.||.|..++||+|+ .+.++.||||++.-++.. ..+.+++|+..|+.++||||++++..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 4578889999999999999997 567899999999765433 35789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
||.+|++.++++.....| +++..+..|.+++++||.|||.+ |.||||||+.||||+.+|.+||+|||.+..+.+.+
T Consensus 105 fMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 999999999998876555 89999999999999999999999 99999999999999999999999999987776644
Q ss_pred CCccccC-CccccccccCChhhhc--cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc-
Q 001238 933 GGSFSAN-PQFAGSYGYIAPEYAN--MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE- 1008 (1117)
Q Consensus 933 ~~~~~~~-~~~~gt~~y~aPE~~~--~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1008 (1117)
.+.... ..++||+.|||||++. ...|+.|+||||||++..||++|..||....+ .+.+...++..+....
T Consensus 181 -~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP-----mkvLl~tLqn~pp~~~t 254 (516)
T KOG0582|consen 181 -DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP-----MKVLLLTLQNDPPTLLT 254 (516)
T ss_pred -ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh-----HHHHHHHhcCCCCCccc
Confidence 332333 7789999999999854 35799999999999999999999999975432 2333333333321111
Q ss_pred -ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1009 -VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1009 -~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+.+-...++...++|+.. |++.||++|||+++++.
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~------CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIAL------CLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHH------HhhcCcccCCCHHHHhc
Confidence 11112122233345555554 99999999999999865
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-40 Score=355.04 Aligned_cols=260 Identities=28% Similarity=0.429 Sum_probs=208.8
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCC--ceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRK--TKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~e 852 (1117)
.+|..++.||+|+||+||++... +|+..|||.+...+....+.+.+|++++++++|||||+++|...... .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35777899999999999999854 48999999987654333667899999999999999999999755554 5889999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-CCcceeccccccccccCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-RYESCLADFGLARLVEDD 931 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfGla~~~~~~ 931 (1117)
|+++|+|.+++.+... .+++..++++++||++||+|||++ |||||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~- 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLES- 170 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccc-
Confidence 9999999999987642 599999999999999999999999 9999999999999999 79999999999987653
Q ss_pred CCCccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
..........+.||+.|||||++..+ ...+++||||+||++.||+||++||... .....++-...... .
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~~~------~ 240 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGRED------S 240 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhccC------C
Confidence 11122334467899999999999854 3446999999999999999999999642 11222222222222 1
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
.|.++...+...++++.. |+..+|++||||.++++..-...
T Consensus 241 ~P~ip~~ls~~a~~Fl~~------C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 241 LPEIPDSLSDEAKDFLRK------CFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred CCCCCcccCHHHHHHHHH------HhhcCcccCcCHHHHhhChhhhc
Confidence 235555666677888877 99999999999999988654433
No 18
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.3e-40 Score=335.07 Aligned_cols=263 Identities=22% Similarity=0.311 Sum_probs=198.9
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
.|+...++|+|+||+||+++.+ +|+.||||++.... +.-.+-..+|++++++++|+|+|.++.+|......++|+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 5677788999999999999865 59999999997543 22334567999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
|+..-|.++ .+.. .| ++...+.++++|++.|+.|+|++ ++|||||||+|||++.+|.+||||||+|+.+...+
T Consensus 83 ~dhTvL~eL-e~~p-~G-~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg- 155 (396)
T KOG0593|consen 83 CDHTVLHEL-ERYP-NG-VPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG- 155 (396)
T ss_pred cchHHHHHH-Hhcc-CC-CCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCc-
Confidence 987655554 3332 23 78899999999999999999999 99999999999999999999999999999887422
Q ss_pred CccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHH----------HHHhc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVR----------DHLKS 1002 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~----------~~~~~ 1002 (1117)
...+..+.|.+|.|||.+-+ ..|+..+||||+||++.||++|.+-|.+....+ .+..+.+ ..+..
T Consensus 156 ---d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD-QLy~I~ktLG~L~prhq~iF~~ 231 (396)
T KOG0593|consen 156 ---DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID-QLYLIRKTLGNLIPRHQSIFSS 231 (396)
T ss_pred ---chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH-HHHHHHHHHcccCHHHHHHhcc
Confidence 24556789999999998765 899999999999999999999999987643322 2222111 11111
Q ss_pred CCCCccccCcccCCCCchhHHHH----HHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1003 KKDPVEVLDPKLQGHPDTQIQEM----LQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1003 ~~~~~~~~~~~l~~~~~~~~~~~----l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+.+..+.-|.... +....+.+ --.+.++..|++.||++|++.++++.
T Consensus 232 N~~F~Gv~lP~~~~-~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 232 NPFFHGVRLPEPEH-PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCceeeeecCCCCC-ccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111111121111 11111111 12345667799999999999998864
No 19
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=346.08 Aligned_cols=268 Identities=29% Similarity=0.413 Sum_probs=199.2
Q ss_pred CCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhc--cCCCCcceEEeeeecCC----ceEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSR--IRHRNIVRLLGWGANRK----TKLLF 850 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lv 850 (1117)
.....+.||+|+||.||||.. +++.||||++.... .+.|++|-++++. ++|+||++++++-.... ++++|
T Consensus 211 pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhc-cCceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 456678899999999999998 55899999997543 4567777776554 58999999999866554 78999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccC------CCceeeeccccCeEEEcCCCcceeccccc
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDC------VPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
+||.+.|+|.++++.+. ++|....+|+..+++||+|||+.. +|+|+|||||++||||..|+++.|+|||+
T Consensus 287 t~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999999864 899999999999999999999863 57999999999999999999999999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhccCC------CCcCCCeeehhhhHHHHHhCCCCCC------------CCC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTK------ISEKSDVYSYGVVLLEIITGKKPVD------------ASF 986 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~SlG~vl~ell~g~~P~~------------~~~ 986 (1117)
|..+...... ......+||.+|||||++.+.- .-.+.||||+|.|+|||+++..-++ ...
T Consensus 363 Al~~~p~~~~--~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 363 ALRLEPGKPQ--GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred eEEecCCCCC--cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 9988754332 2333479999999999987532 2247999999999999999754332 111
Q ss_pred CCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 001238 987 PDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEPA 1061 (1117)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~ 1061 (1117)
.....+.+...-.++++.++ ...+.-........+.+ ....||+.||+.|-|+.-|.+.+.++.....
T Consensus 441 G~hPt~e~mq~~VV~kK~RP-~~p~~W~~h~~~~~l~e------t~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKKQRP-KIPDAWRKHAGMAVLCE------TIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred cCCCCHHHHHHHHHhhccCC-CChhhhhcCccHHHHHH------HHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 11222333322223332221 11111111222223333 4445999999999999999998887765443
No 20
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=367.82 Aligned_cols=266 Identities=27% Similarity=0.452 Sum_probs=216.7
Q ss_pred CCCCCCeeeecCCeEEEEEEcC----CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP----SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
..++.++||.|.||+||+|+++ ....||||.++.... ....+|..|+.+|.++.||||+++.|+.......++|.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 4567889999999999999864 245799999987643 34557999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|||++|+|+.+|+.++ +.+++.+...+.++||.|+.||-+. ++|||||.++||||+.+..+|++|||++|.+.++
T Consensus 710 EyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred hhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 9999999999999876 5599999999999999999999999 9999999999999999999999999999988776
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
....+..... .-..+|.|||.+..++++.++||||||+|+||.++ |.+||-+. ..+++...+.+.++..
T Consensus 785 ~~~~ytt~GG-KIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm--SNQdVIkaIe~gyRLP------- 854 (996)
T KOG0196|consen 785 PEAAYTTLGG-KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--SNQDVIKAIEQGYRLP------- 854 (996)
T ss_pred CCccccccCC-ccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc--chHHHHHHHHhccCCC-------
Confidence 5332222211 12468999999999999999999999999999888 99999643 3444555444433221
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCCCCCCCC
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEPASGSEA 1066 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~ 1066 (1117)
.-.+++.... ++++.||++|-.+||.+.+|+..|+++...+.+-...
T Consensus 855 --pPmDCP~aL~-------qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~ 901 (996)
T KOG0196|consen 855 --PPMDCPAALY-------QLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTI 901 (996)
T ss_pred --CCCCCcHHHH-------HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhccc
Confidence 1122333222 3455699999999999999999999998887765433
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=354.57 Aligned_cols=264 Identities=21% Similarity=0.280 Sum_probs=204.9
Q ss_pred HhccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHH-HHHHHHHHhccC-CCCcceEEeeeecCC-ceE
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGA-FSSEIATLSRIR-HRNIVRLLGWGANRK-TKL 848 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~-~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~ 848 (1117)
...++|++.++||.|.||.||+|+ ..+|..||||+++..-....+. -.||+..++++. |||||++.+.+.+.+ ..|
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 345689999999999999999997 4568999999998764433332 358999999998 999999999998888 999
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+|||||+ .+|..+++++ ...+++.+++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+||.+
T Consensus 87 fVfE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 87 FVFEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeHHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 9999994 6899999886 45699999999999999999999999 9999999999999999999999999999988
Q ss_pred cCCCCCccccCCccccccccCChhhh-ccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYA-NMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
... .+.+..+.|.+|+|||++ +.+.|+.+.||||+|||++|+.+-++-|.+... .+.+.++...-+.+.
T Consensus 161 ~Sk-----pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE-----~Dqi~KIc~VLGtP~ 230 (538)
T KOG0661|consen 161 RSK-----PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE-----IDQIYKICEVLGTPD 230 (538)
T ss_pred ccC-----CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH-----HHHHHHHHHHhCCCc
Confidence 653 356678899999999976 568899999999999999999999998865321 111222221111121
Q ss_pred cccCc-----------ccCCCCchhHHHH-----HHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1008 EVLDP-----------KLQGHPDTQIQEM-----LQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1008 ~~~~~-----------~l~~~~~~~~~~~-----l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
+..++ .++......+..+ .+.+.++..|+++||++|||+++.++.
T Consensus 231 ~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 231 KDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred cccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111 1111111112211 133445556999999999999999884
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=359.83 Aligned_cols=253 Identities=25% Similarity=0.404 Sum_probs=213.5
Q ss_pred HHhccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 772 GDATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 772 ~~~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++....|+..++||+|+.|.||.+. ..+++.||||++........+-+.+|+.+|+..+|+|||++++.|...++.|+|
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 4455678888999999999999986 457889999999877666667788999999999999999999999888999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
||||+||+|.+++.... +++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+..
T Consensus 349 MEym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred EeecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 99999999999998754 89999999999999999999999 999999999999999999999999999988865
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.. ..+.+.+|||.|||||+.....|++|+||||||+|++||+.|++||-.. ...+.+......+ .+ +.
T Consensus 422 ~~----~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE-----~PlrAlyLIa~ng-~P-~l- 489 (550)
T KOG0578|consen 422 EQ----SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE-----NPLRALYLIATNG-TP-KL- 489 (550)
T ss_pred cc----CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC-----ChHHHHHHHhhcC-CC-Cc-
Confidence 43 3566789999999999999999999999999999999999999999531 1122222222222 11 11
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+...+..+++++.. |+..|+++||++.|+++
T Consensus 490 --k~~~klS~~~kdFL~~------cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 490 --KNPEKLSPELKDFLDR------CLVVDVEQRASAKELLE 522 (550)
T ss_pred --CCccccCHHHHHHHHH------HhhcchhcCCCHHHHhc
Confidence 1123445677888887 99999999999999987
No 23
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=340.51 Aligned_cols=271 Identities=27% Similarity=0.387 Sum_probs=213.3
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhc--cCCCCcceEEeeeecCC----c
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSR--IRHRNIVRLLGWGANRK----T 846 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~ 846 (1117)
...++.++.+.||+|.||+||+|+| .|+.||||++...++ +.+.+|.++++. ++|+||..+++.-..+. +
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hhhheeEEEEEecCccccceeeccc-cCCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 3456788999999999999999999 688999999987654 345667777665 59999999998754433 5
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCceeeeccccCeEEEcCCCcceecc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHD-----CVPAILHRDVKSHNILLGERYESCLAD 921 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivHrDlkp~Nill~~~~~~kl~D 921 (1117)
+++|.+|.+.|||.|+|.+.. ++.+..++++..+|+||++||.. +.|+|+|||||+.||||..++.+.|+|
T Consensus 284 LwLvTdYHe~GSL~DyL~r~t----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRNT----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEeeecccCCcHHHHHhhcc----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 799999999999999998853 88999999999999999999965 579999999999999999999999999
Q ss_pred ccccccccCCCCCccccCCccccccccCChhhhccCC------CCcCCCeeehhhhHHHHHhC----------CCCCCCC
Q 001238 922 FGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTK------ISEKSDVYSYGVVLLEIITG----------KKPVDAS 985 (1117)
Q Consensus 922 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~SlG~vl~ell~g----------~~P~~~~ 985 (1117)
+|+|.......+.-.......+||.+|||||++...- .-..+||||||.|+||++.+ +.||.+.
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 9999887765555556667889999999999986532 23479999999999999874 5788766
Q ss_pred CCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 986 FPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
-+.++...++.+-... +.+.|.++..+. ....+....+++..||..+|.-|-|+-.+.+.+.++.+
T Consensus 440 Vp~DPs~eeMrkVVCv------~~~RP~ipnrW~-s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCV------QKLRPNIPNRWK-SDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCHHHHhcceee------cccCCCCCcccc-cCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 5555555444332221 123344444432 12334444567888999999999999999988888764
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-39 Score=349.25 Aligned_cols=262 Identities=27% Similarity=0.333 Sum_probs=209.3
Q ss_pred cCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecC--CceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 850 (1117)
..|+.+++||+|.||.||+|+ ..+|+.||+|+++... .....-..+||.+|+++.||||+++.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 356667889999999999997 5679999999997653 44455678999999999999999999988776 688999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
+|||++ +|.-++.... -.+++.++..++.|+++||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+++..
T Consensus 197 FeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred Eecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 999975 7777776542 2389999999999999999999999 999999999999999999999999999998875
Q ss_pred CCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
... ...+..+.|.+|.|||.+.+ ..|+.++|+||.|||+.||++|++.|++ ...++.+..+++.-+.+.+.
T Consensus 271 ~~~---~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G-----~tEveQl~kIfklcGSP~e~ 342 (560)
T KOG0600|consen 271 SGS---APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG-----RTEVEQLHKIFKLCGSPTED 342 (560)
T ss_pred CCC---cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC-----ccHHHHHHHHHHHhCCCChh
Confidence 432 34677889999999997765 6899999999999999999999999964 34455666666665556555
Q ss_pred cCc--ccCC--------CCchhHHHHH-----HHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1010 LDP--KLQG--------HPDTQIQEML-----QALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1010 ~~~--~l~~--------~~~~~~~~~l-----~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.++ .++. .+...+++.. ..+.+.-..+..||++|.|+.++++
T Consensus 343 ~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 343 YWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 555 2221 1122233332 2344555678889999999998876
No 25
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-41 Score=366.83 Aligned_cols=318 Identities=21% Similarity=0.244 Sum_probs=234.2
Q ss_pred cEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCCCcceEecccc
Q 001238 270 QYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVN 349 (1117)
Q Consensus 270 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N 349 (1117)
+.|+|.+|.|+..-.+.+..++.|+.|||+.|.|+.+.-..|..-.++++|+|++|+|+..-...|.++.+|..|.|++|
T Consensus 128 ~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrN 207 (873)
T KOG4194|consen 128 EKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRN 207 (873)
T ss_pred eEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccC
Confidence 33344444443333333444444444444444444333334444455666666666666555555666666666666666
Q ss_pred cccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCCcccccceeecccccccCCCcc
Q 001238 350 QISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPR 429 (1117)
Q Consensus 350 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 429 (1117)
+|+...+..|.++++|+.|+|..|+|.-..--.|.+|++|+.|.|..|+++..-...|..|.++++|+|+.|+++..-..
T Consensus 208 rittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g 287 (873)
T KOG4194|consen 208 RITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEG 287 (873)
T ss_pred cccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcc
Confidence 66655555666666666666666666633345677788888888888888777777788888888888888888876677
Q ss_pred cccCCCCCCeeeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCC
Q 001238 430 GIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNL 509 (1117)
Q Consensus 430 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 509 (1117)
+++++..|+.|+|++|.|..+-++.+..+++|++|+|++|+|+...+..|..|..|++|+|++|++..+-..+|.++++|
T Consensus 288 ~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL 367 (873)
T KOG4194|consen 288 WLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSL 367 (873)
T ss_pred cccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhh
Confidence 88888888888888888888888888888899999999999988888888889999999999999987777888899999
Q ss_pred ceEEccCCccccccch---hhhcccccccccccCCcCCCCCCCCcCCCccccEEeccccccCCCCCcccccccceeEEec
Q 001238 510 TFLDVHSNSIAGNLPA---GLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDL 586 (1117)
Q Consensus 510 ~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 586 (1117)
++|||++|.|+..+.+ .|..+++|+.|+|.+|+|+.|...+|.++.+|++|+|.+|.|..+.|++|..+ .|+.|.+
T Consensus 368 ~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 368 HKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred hhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 9999999988876544 47788888888888888888888888888999999999998888888888888 7887776
Q ss_pred cc
Q 001238 587 SS 588 (1117)
Q Consensus 587 s~ 588 (1117)
..
T Consensus 447 nS 448 (873)
T KOG4194|consen 447 NS 448 (873)
T ss_pred cc
Confidence 44
No 26
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=358.96 Aligned_cols=259 Identities=31% Similarity=0.454 Sum_probs=201.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+.+.+.+.||+|.||+||+|+|.. .||||++.... ....++|+.|+.++++-+|.||+-+.|||..+.. .+|..+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred HHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 346778899999999999999843 79999998653 3345789999999999999999999999999887 899999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
|+|.+|..+++..+ ..++..+.+.||+|||+|+.|||.+ +|||||+|..||++.+++.|||+|||++..-..-.+
T Consensus 469 CeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred ccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence 99999999999765 3488999999999999999999999 999999999999999999999999999965433211
Q ss_pred CccccCCccccccccCChhhhcc---CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM---TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
........|...|||||+++. .+|++.+||||||+|+|||++|..||... ..++ +.-++. + +.-..+..
T Consensus 544 --~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dq-IifmVG---r-G~l~pd~s 615 (678)
T KOG0193|consen 544 --EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQ-IIFMVG---R-GYLMPDLS 615 (678)
T ss_pred --ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-Chhh-eEEEec---c-cccCccch
Confidence 123334568889999999864 57899999999999999999999999732 1111 111110 1 10000100
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
.........+.+++ ..||..++++||.+.+|+..|+.+..
T Consensus 616 --~~~s~~pk~mk~Ll------~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 616 --KIRSNCPKAMKRLL------SDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred --hhhccCHHHHHHHH------HHHHhcCcccCccHHHHHHHHHHhhh
Confidence 01112223344444 45999999999999999998888765
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.8e-39 Score=350.33 Aligned_cols=246 Identities=29% Similarity=0.393 Sum_probs=206.3
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+..+ .+.+.+.+|++++++++|||||.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46888899999999999999854 588999999876533 335568999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+.| +|..++... +.++++.+..++.++++||.|||+. +|+|||+||+|||+++.+.+|+||||+|+....
T Consensus 82 ~a~g-~L~~il~~d---~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD---GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST-- 152 (808)
T ss_pred hhhh-hHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc--
Confidence 9977 999999875 3499999999999999999999999 999999999999999999999999999997654
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
.....+...|||-|||||...++.|+..+|+||+||++||+++|++||-. ..+.+.++.+.+....+.
T Consensus 153 --~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----~si~~Lv~~I~~d~v~~p----- 220 (808)
T KOG0597|consen 153 --NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----RSITQLVKSILKDPVKPP----- 220 (808)
T ss_pred --CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----HHHHHHHHHHhcCCCCCc-----
Confidence 23455677899999999999999999999999999999999999999953 345555655554432221
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.........+++- -+..||.+|-+..+++.
T Consensus 221 ---~~~S~~f~nfl~g------LL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 221 ---STASSSFVNFLQG------LLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ---ccccHHHHHHHHH------HhhcChhhcccHHHHhc
Confidence 1223344444444 56779999999988866
No 28
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=362.69 Aligned_cols=373 Identities=25% Similarity=0.240 Sum_probs=238.2
Q ss_pred cEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCCCcceEecccc
Q 001238 270 QYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVN 349 (1117)
Q Consensus 270 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N 349 (1117)
+.|++++|++....+..|.++++|+++++..|.++ .+|.......+|+.|+|.+|.|+..-.+.+..++.|+.||||.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 44666666666555555666666666666666665 44544444445666666666666555555666666666666666
Q ss_pred cccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCCcccccceeecccccccCCCcc
Q 001238 350 QISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPR 429 (1117)
Q Consensus 350 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 429 (1117)
.|+.+.-..|..-.++++|+|++|.|+....+.|..+.+|..|.|+.|+++...+..|.+++.|+.|+|..|+|.-.---
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l 239 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL 239 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhh
Confidence 66644444455555566666666666655555666666666666666666655555566666666666666666521133
Q ss_pred cccCCCCCCeeeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCC
Q 001238 430 GIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNL 509 (1117)
Q Consensus 430 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 509 (1117)
.|.++++|+.|.|..|+|+......|..+.++++|+|..|+++..-..++.+|+.|+.|+||+|.|..+-++...-.++|
T Consensus 240 tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL 319 (873)
T KOG4194|consen 240 TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL 319 (873)
T ss_pred hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc
Confidence 45556666666666666666666666666666666666666666666666667777777777777766666666666677
Q ss_pred ceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCCCccccEEeccccccCCCC---CcccccccceeEEec
Q 001238 510 TFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNRFAGSI---PSQLGSCVKLQLLDL 586 (1117)
Q Consensus 510 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~L 586 (1117)
++|+|++|+|+...+..|..+..|+.|+|++|+|+.+...+|..+.+|++|+|++|.|...+ ...|..+++|+.|+|
T Consensus 320 ~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l 399 (873)
T KOG4194|consen 320 KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRL 399 (873)
T ss_pred eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheee
Confidence 77777777777666666777777777777777777776677777777777777777666433 234666777777777
Q ss_pred cccccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEeccCccccCCcc
Q 001238 587 SSNQLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDLSHNELSGDLH 645 (1117)
Q Consensus 587 s~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~ 645 (1117)
.+|+|....-..|..+++| +.|||.+|.|..+-|.+|..| +|+.|-++.-.+-|++.
T Consensus 400 ~gNqlk~I~krAfsgl~~L-E~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 400 TGNQLKSIPKRAFSGLEAL-EHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQ 456 (873)
T ss_pred cCceeeecchhhhccCccc-ceecCCCCcceeecccccccc-hhhhhhhcccceEEecc
Confidence 7777764334556666666 677777777777777788887 78888777766766654
No 29
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-38 Score=353.78 Aligned_cols=254 Identities=26% Similarity=0.337 Sum_probs=207.9
Q ss_pred hccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecC----Cc-cchHHHHHHHHHHhccC-CCCcceEEeeeecCCc
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRAS----DK-ISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKT 846 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 846 (1117)
..+.|.+++.||+|+||+|+.|. ..+|+.||+|++... .. ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 35689999999999999999996 456899999977653 11 23456778999999998 9999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC-Ccceecccccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER-YESCLADFGLA 925 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfGla 925 (1117)
.|+||||+.||+|.+++... +++.+.++.++++|+++|++|+|++ +|+||||||+||+++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999873 4588999999999999999999999 99999999999999999 99999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhccCC-CC-cCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANMTK-IS-EKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSK 1003 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 1003 (1117)
..... ......+.+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+. .......+...+..
T Consensus 169 ~~~~~----~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-----~~~~~l~~ki~~~~ 239 (370)
T KOG0583|consen 169 AISPG----EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-----SNVPNLYRKIRKGE 239 (370)
T ss_pred cccCC----CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----ccHHHHHHHHhcCC
Confidence 87631 113456789999999999999877 86 899999999999999999999975 23333333333332
Q ss_pred CCCccccCcccCCCC-chhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1004 KDPVEVLDPKLQGHP-DTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1004 ~~~~~~~~~~l~~~~-~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
... +... +.....+++. |+..+|.+|+++.+|. .-.-++
T Consensus 240 ~~~--------p~~~~S~~~~~Li~~------mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 240 FKI--------PSYLLSPEARSLIEK------MLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred ccC--------CCCcCCHHHHHHHHH------HcCCCcccCCCHHHHh-hChhhc
Confidence 222 2222 4456666665 9999999999999998 333333
No 30
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.3e-38 Score=315.80 Aligned_cols=262 Identities=23% Similarity=0.323 Sum_probs=207.1
Q ss_pred cCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCcc--chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKI--STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
.+|...+++|+|.||.||+|+ .++|+.||||+++..... -.....+|++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 367778999999999999997 567999999999865322 12346789999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
||+ .+|..++++.. -.+...++..++.++++|++|+|++ .|+||||||.|+|++++|.+||+|||+|+.+....
T Consensus 82 fm~-tdLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ecc-ccHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 995 58999998764 4589999999999999999999999 99999999999999999999999999999987543
Q ss_pred CCccccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 933 GGSFSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
...+..+.|.+|.|||.+. .+.|+..+||||.|||+.||+.|.+-|.+. ...+.+...++.-+.+.+..+
T Consensus 156 ----~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-----sDidQL~~If~~LGTP~~~~W 226 (318)
T KOG0659|consen 156 ----RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-----SDIDQLSKIFRALGTPTPDQW 226 (318)
T ss_pred ----cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-----chHHHHHHHHHHcCCCCcccC
Confidence 2333448899999999765 578999999999999999999998877542 233344444444445554445
Q ss_pred cccCCCCchhH-H-------------HHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1012 PKLQGHPDTQI-Q-------------EMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1012 ~~l~~~~~~~~-~-------------~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
|++..-++... + .--..+++...++..+|.+|.+++|.+++
T Consensus 227 P~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 227 PEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 54433322110 0 00123445556899999999999998774
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=321.65 Aligned_cols=227 Identities=24% Similarity=0.323 Sum_probs=191.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccch---HHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKIST---GAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|...+.||.|+||.|..++.+ +|..+|+|++.+.+.... +...+|-.+++.+.||.++++++.+.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46888899999999999999854 588999999987644333 34567999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||++||.|..++++. +++++..++-+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||.|+.+..
T Consensus 124 eyv~GGElFS~Lrk~---~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS---GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG- 196 (355)
T ss_pred eccCCccHHHHHHhc---CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC-
Confidence 999999999999875 3499999999999999999999999 999999999999999999999999999998753
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
..-+.+|||.|+|||+++.+.|..++|.|||||++|||+.|.+||.+.. ......+++..+-..
T Consensus 197 ------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~-----~~~iY~KI~~~~v~f----- 260 (355)
T KOG0616|consen 197 ------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN-----PIQIYEKILEGKVKF----- 260 (355)
T ss_pred ------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC-----hHHHHHHHHhCcccC-----
Confidence 2446799999999999999999999999999999999999999996532 245555555554333
Q ss_pred cccCCCCchhHHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQA 1028 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~ 1028 (1117)
+..++...+.+++.
T Consensus 261 ---P~~fs~~~kdLl~~ 274 (355)
T KOG0616|consen 261 ---PSYFSSDAKDLLKK 274 (355)
T ss_pred ---CcccCHHHHHHHHH
Confidence 33344445555544
No 32
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-38 Score=343.29 Aligned_cols=265 Identities=26% Similarity=0.414 Sum_probs=214.7
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccc-hHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKIS-TGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
.....++++||+|-||.|..+....+..||||+++...... ..+|.+|+++|.+++|||||+++|+|..++..++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 35677889999999999999998778999999998765433 47899999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
|++|+|..++..+.... .......+|+.|||+|++||.+. ++||||+.++|+|+|+++++||+|||++|-+..+
T Consensus 617 mEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg-- 690 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG-- 690 (807)
T ss_pred HhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccC--
Confidence 99999999999875433 45566788999999999999998 9999999999999999999999999999976543
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh--CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT--GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
..+......+-..+|||||.+.-+++++++|||+||+++||+++ .+.||... .++.+++-.......... .++.
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~l--t~e~vven~~~~~~~~~~--~~~l 766 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQL--TDEQVVENAGEFFRDQGR--QVVL 766 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhh--hHHHHHHhhhhhcCCCCc--ceec
Confidence 23344555677889999999999999999999999999999776 88999653 334455544444443322 2222
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
+.-+.++....+ +++.||..+.++||+++++...|.+.
T Consensus 767 ~~P~~cp~~lye-------lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYE-------LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHH-------HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 232333333332 33449999999999999999988764
No 33
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=346.98 Aligned_cols=241 Identities=27% Similarity=0.449 Sum_probs=199.1
Q ss_pred CCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCC
Q 001238 779 TAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGT 858 (1117)
Q Consensus 779 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 858 (1117)
...+.||.|+.|.||+|+. .++.||||+++.- -+.+|+.|++|+||||+.|.|+|.....+|+|||||+.|-
T Consensus 127 sELeWlGSGaQGAVF~Grl-~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRL-HNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhhhccCcccceeeeec-cCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 3467899999999999998 5689999987632 2468999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcccc
Q 001238 859 LGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSA 938 (1117)
Q Consensus 859 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 938 (1117)
|..+++... .+.......+..+||.|+.|||.+ .|||||||.-||||..+..+||+|||.++...+. ..
T Consensus 199 L~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-----ST 267 (904)
T KOG4721|consen 199 LYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-----ST 267 (904)
T ss_pred HHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-----hh
Confidence 999998764 378888899999999999999999 9999999999999999999999999999987643 34
Q ss_pred CCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCC
Q 001238 939 NPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHP 1018 (1117)
Q Consensus 939 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1018 (1117)
...++||..|||||+++..+.+.|+||||||||+|||+||..||.... .. .++.. .+. ..+.-.++...
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd---ss--AIIwG---VGs---NsL~LpvPstc 336 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD---SS--AIIWG---VGS---NSLHLPVPSTC 336 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc---hh--eeEEe---ccC---CcccccCcccC
Confidence 567899999999999999999999999999999999999999996421 11 01110 011 11111223334
Q ss_pred chhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1019 DTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1019 ~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
+.-+.-+++. ||+..|..||++++++..|+-
T Consensus 337 P~GfklL~Kq------cw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 337 PDGFKLLLKQ------CWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred chHHHHHHHH------HHhcCCCCCccHHHHHHHHhh
Confidence 4455556665 999999999999999988763
No 34
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1e-37 Score=357.47 Aligned_cols=263 Identities=27% Similarity=0.419 Sum_probs=202.3
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCCc-cchHHHHHHHHHHhcc-CCCCcceEEeeeecCC-
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASDK-ISTGAFSSEIATLSRI-RHRNIVRLLGWGANRK- 845 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~- 845 (1117)
.++|++.++||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 45789999999999999999963 2357899999875432 2345688999999999 8999999999887644
Q ss_pred ceEEEEEecCCCChhhhhcCCCC---------------------------------------------------------
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGEC--------------------------------------------------------- 868 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 868 (1117)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 57899999999999998865321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCcccccc
Q 001238 869 --AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSY 946 (1117)
Q Consensus 869 --~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~ 946 (1117)
...+++.++.+++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....... ........+++
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~~~~ 240 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKGSARLPL 240 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcc--hhcccCCCCCc
Confidence 12377889999999999999999999 999999999999999999999999999986543211 11222345678
Q ss_pred ccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHH
Q 001238 947 GYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEM 1025 (1117)
Q Consensus 947 ~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1025 (1117)
.|+|||++....++.++|||||||++|||++ |+.||...... .. +......... ...+...+..+.++
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-~~----~~~~~~~~~~------~~~~~~~~~~l~~l 309 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-EE----FCQRLKDGTR------MRAPENATPEIYRI 309 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-HH----HHHHHhcCCC------CCCCCCCCHHHHHH
Confidence 8999999998899999999999999999997 99999653221 11 1122222111 11122233344444
Q ss_pred HHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 1026 LQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 1026 l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
+ ..||+.||++||++.++++.|+++.++
T Consensus 310 i------~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 310 M------LACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred H------HHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 4 459999999999999999999987653
No 35
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-38 Score=348.91 Aligned_cols=247 Identities=26% Similarity=0.371 Sum_probs=210.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.-|+.++.||+|+.|.|..|++ .+|+.+|||++.+.. ......+++|+-+|+-+.||||+++|+++.+..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4588899999999999999975 579999999997652 222456899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|.|.+++... |.+++.++.+++.||+.|+.|+|+. +|+|||+||+|+|+|.++.+||+|||+|.....+
T Consensus 92 Eyv~gGELFdylv~k---G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRK---GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EecCCchhHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 999999999999765 4589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccCCccccccccCChhhhccCCCC-cCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKIS-EKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
....+-||++.|.|||++.+.+|+ .++||||+|||+|.|++|+.||++ +.+...+.+..++..
T Consensus 166 -----klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLlKV~~G~f------ 229 (786)
T KOG0588|consen 166 -----KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLLKVQRGVF------ 229 (786)
T ss_pred -----ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHHHHHcCcc------
Confidence 344567999999999999999986 899999999999999999999973 344444444444432
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.++...+...+.++.. ++..||++|-|++||.+.
T Consensus 230 --~MPs~Is~eaQdLLr~------ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 --EMPSNISSEAQDLLRR------MLDVDPSTRITTEEILKH 263 (786)
T ss_pred --cCCCcCCHHHHHHHHH------HhccCccccccHHHHhhC
Confidence 2344555677888777 788899999999999874
No 36
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=350.69 Aligned_cols=260 Identities=26% Similarity=0.420 Sum_probs=207.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC--C---cEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCce
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS--G---LTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~--~---~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 847 (1117)
.+..+.++||+|+||.||+|+.+. + ..||||..+.. ......+|.+|+++|++++|||||++||++......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 345566899999999999997532 2 23899998853 244567799999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++|||+|+||+|.++++.... .++..++.+++.++|+||+|||++ +++||||.++|+|++.++.+||+|||+++.
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999998643 489999999999999999999999 999999999999999999999999999886
Q ss_pred ccCCCCCccccCC-ccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCC
Q 001238 928 VEDDSGGSFSANP-QFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKD 1005 (1117)
Q Consensus 928 ~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1117)
... +.... ...-..+|+|||.+....|++++|||||||++||+++ |..||.+. ...+....+......
T Consensus 312 ~~~-----~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~-----~~~~v~~kI~~~~~r 381 (474)
T KOG0194|consen 312 GSQ-----YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM-----KNYEVKAKIVKNGYR 381 (474)
T ss_pred Ccc-----eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC-----CHHHHHHHHHhcCcc
Confidence 531 11111 2235679999999999999999999999999999999 89999653 222222222122211
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCCCC
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEPAS 1062 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~~ 1062 (1117)
...+...+..++.+... ||..+|++||+|.++.+.++.+......
T Consensus 382 ------~~~~~~~p~~~~~~~~~------c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 382 ------MPIPSKTPKELAKVMKQ------CWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ------CCCCCCCHHHHHHHHHH------hccCChhhccCHHHHHHHHHHHHhcccc
Confidence 11122334455555544 9999999999999999999998766553
No 37
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=341.26 Aligned_cols=249 Identities=28% Similarity=0.403 Sum_probs=211.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
...|+..+.||+|.||.||+|. ...++.||+|++.-. .+.+.+.+++|+.++..++++||.++|+.+..+..++++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 3457777999999999999996 456899999999754 34456788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
||.||++.+.++... .+++.....+++++..|+.|+|++ +.+|||||+.||++..+|.+|++|||.+.......
T Consensus 92 y~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999997653 347888888999999999999999 99999999999999999999999999998876432
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
..+.+++||+.|||||++....|+.|+||||+|++.+||++|.+|+....+.. .+ .-......|
T Consensus 166 ----~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr---------vl---flIpk~~PP 229 (467)
T KOG0201|consen 166 ----KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR---------VL---FLIPKSAPP 229 (467)
T ss_pred ----hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce---------EE---EeccCCCCC
Confidence 33478899999999999999999999999999999999999999997644310 00 001122335
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+.+.+...++++++. |++.+|+.||++.++++
T Consensus 230 ~L~~~~S~~~kEFV~~------CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEA------CLDKNPEFRPSAKELLK 262 (467)
T ss_pred ccccccCHHHHHHHHH------HhhcCcccCcCHHHHhh
Confidence 6667777788888887 99999999999998865
No 38
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=383.25 Aligned_cols=496 Identities=28% Similarity=0.328 Sum_probs=275.2
Q ss_pred cCCccccccccCCeEeccCCCCCCCch-hhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhcc
Q 001238 89 HVPTNFTSLLSLNRLVLSGTNLTGSIP-KEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIG 167 (1117)
Q Consensus 89 ~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 167 (1117)
.||..+-.-..++.|+++.|-+- ..| +.+.+.-+|+.||+|+|.+. ..|..+..+.+|+.|+++.|.+. ..|.+.+
T Consensus 12 ~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~ 88 (1081)
T KOG0618|consen 12 LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCS 88 (1081)
T ss_pred ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhh
Confidence 46666666666888888888776 333 22344555888888888886 78888888888888888888887 7788888
Q ss_pred CCcCCcEEeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccce
Q 001238 168 NLSSLTQLFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQT 247 (1117)
Q Consensus 168 ~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~ 247 (1117)
++.+|++|.|.+|++. .+|.++..+++|++|+++.|+. +.+|.-+..++.+..+..++|...
T Consensus 89 ~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f--~~~Pl~i~~lt~~~~~~~s~N~~~--------------- 150 (1081)
T KOG0618|consen 89 NMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHF--GPIPLVIEVLTAEEELAASNNEKI--------------- 150 (1081)
T ss_pred hhhcchhheeccchhh-cCchhHHhhhcccccccchhcc--CCCchhHHhhhHHHHHhhhcchhh---------------
Confidence 8888888888888886 5788888888888888877764 345555555555555544444110
Q ss_pred eecccccccccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcC
Q 001238 248 IAIYTALLSGQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSL 327 (1117)
Q Consensus 248 L~l~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l 327 (1117)
..++.. ..+.+++..|.+.+.++..+..+++ .|+|++|.+. . -.+.++.+|+.|..+.|++
T Consensus 151 -------------~~lg~~-~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~l 211 (1081)
T KOG0618|consen 151 -------------QRLGQT-SIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQL 211 (1081)
T ss_pred -------------hhhccc-cchhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhccc
Confidence 001111 1556666666666666666665555 5666666665 1 2445556666666666666
Q ss_pred CCCCccccCCCCCcceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCC
Q 001238 328 TGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSI 407 (1117)
Q Consensus 328 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 407 (1117)
.... + ..++|+.|+.++|.++...+. ..-.+|+++++++|+++ .+|++++.+.+|+.+...+|+++ .+|..+
T Consensus 212 s~l~---~-~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri 283 (1081)
T KOG0618|consen 212 SELE---I-SGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRI 283 (1081)
T ss_pred ceEE---e-cCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHH
Confidence 5221 1 125566666666666522111 11234555666666655 33455555555555555555554 445555
Q ss_pred CcccccceeecccccccCCCcccccCCCCCCeeeccCccCCCCCCCCcccccc-cceeccCCCcccccCCCCcCCCCCCC
Q 001238 408 SNCQNLEAVDLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSS-LIRFRANSNKLTGFIPPEIGNLKNLN 486 (1117)
Q Consensus 408 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~L~ 486 (1117)
...++|+.|++.+|.+. -+|....+++.|+.|+|..|+|....+..|.-... |..|+.+.|++.......=..++.|+
T Consensus 284 ~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq 362 (1081)
T KOG0618|consen 284 SRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQ 362 (1081)
T ss_pred hhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHH
Confidence 55555555555555555 34554555555555555555555332222222222 44444444544422211111233445
Q ss_pred EEEccCCcCCCCCCcccccCCCCceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCCCccccEEeccccc
Q 001238 487 FLDLGSNRLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNR 566 (1117)
Q Consensus 487 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~ 566 (1117)
.|++.+|.+++..-..+.++.+|+.|+|++|+|.......+.++..|+.|+||+|+++.+
T Consensus 363 ~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~L-------------------- 422 (1081)
T KOG0618|consen 363 ELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTL-------------------- 422 (1081)
T ss_pred HHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhh--------------------
Confidence 555555555444444444445555555555554433333444444444444444444444
Q ss_pred cCCCCCcccccccceeEEeccccccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEeccCcccc-CCcc
Q 001238 567 FAGSIPSQLGSCVKLQLLDLSSNQLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDLSHNELS-GDLH 645 (1117)
Q Consensus 567 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~-~~~~ 645 (1117)
|.....+..|++|...+|+|. ..| .+..++.+ +.+|+|.|+|+...-......++|++|||++|... -+-.
T Consensus 423 -----p~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL-~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~ 494 (1081)
T KOG0618|consen 423 -----PDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQL-KVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHK 494 (1081)
T ss_pred -----hHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcc-eEEecccchhhhhhhhhhCCCcccceeeccCCcccccchh
Confidence 344444444444444444444 333 34444444 34444444443322222222378888888888742 2344
Q ss_pred hhhhcccceEEEeecc
Q 001238 646 FLAELQNLVVLNVSHN 661 (1117)
Q Consensus 646 ~l~~l~~L~~L~ls~N 661 (1117)
.+..+.++...+++-|
T Consensus 495 ~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 495 TLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhHHhhhhhheecccC
Confidence 4666666777776666
No 39
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.6e-36 Score=342.15 Aligned_cols=264 Identities=28% Similarity=0.447 Sum_probs=201.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-----------------CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-----------------SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRL 837 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l 837 (1117)
++|++.++||+|+||.||+|.+. ++..||+|++.... .....+|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 46888999999999999999743 23479999987643 2234578999999999999999999
Q ss_pred EeeeecCCceEEEEEecCCCChhhhhcCCC----------------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceee
Q 001238 838 LGWGANRKTKLLFYDYMPNGTLGMLLHDGE----------------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILH 901 (1117)
Q Consensus 838 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 901 (1117)
++++.+.+..++||||+++|+|.+++.... ....+++.++.+++.|++.||+|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 999999999999999999999999886431 112367889999999999999999999 9999
Q ss_pred eccccCeEEEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh--CC
Q 001238 902 RDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT--GK 979 (1117)
Q Consensus 902 rDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~--g~ 979 (1117)
|||||+||++++++.+||+|||+++...... .........++..|+|||++....++.++||||||+++|||++ +.
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGD--YYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCc--eeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999998664322 1122234456789999999988899999999999999999987 56
Q ss_pred CCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 980 KPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 980 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
.||... ........+............ ...+...+..+.+++ ..||+.+|++||++.+|.+.|++
T Consensus 240 ~p~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li------~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGEL--TDEQVIENAGEFFRDQGRQVY---LFRPPPCPQGLYELM------LQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcC--CHHHHHHHHHHHhhhcccccc---ccCCCCCCHHHHHHH------HHHccCCchhCcCHHHHHHHHhC
Confidence 677542 222333333332222111111 111122233444444 45999999999999999998863
No 40
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-36 Score=336.74 Aligned_cols=246 Identities=24% Similarity=0.338 Sum_probs=198.0
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCccc---hHHHHHHHHHHhccCCCCcceEEeeeec----CCceEEEEEec
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKIS---TGAFSSEIATLSRIRHRNIVRLLGWGAN----RKTKLLFYDYM 854 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~~ 854 (1117)
..||+|++|.||+|.. +|+.||||+++...... .+.|.+|++++++++|||||++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999998 78999999997653333 4668899999999999999999999876 34678999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++|+|.+++.... .+++..+.+++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++.....
T Consensus 105 ~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~--- 176 (283)
T PHA02988 105 TRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP--- 176 (283)
T ss_pred CCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhccc---
Confidence 9999999997643 4889999999999999999999732 7889999999999999999999999999865432
Q ss_pred ccccCCccccccccCChhhhcc--CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 935 SFSANPQFAGSYGYIAPEYANM--TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
.....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.... ..+........... +
T Consensus 177 ----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-----~~~~~~~i~~~~~~------~ 241 (283)
T PHA02988 177 ----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-----TKEIYDLIINKNNS------L 241 (283)
T ss_pred ----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcCCC------C
Confidence 123468899999999876 689999999999999999999999997431 12222222222211 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
.++...+..+.+++.. ||+.||++||+++++++.|+.+.
T Consensus 242 ~~~~~~~~~l~~li~~------cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 242 KLPLDCPLEIKCIVEA------CTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCCCcCcHHHHHHHHH------HhcCCcccCcCHHHHHHHHHHHH
Confidence 1222234455665555 99999999999999999998765
No 41
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-37 Score=356.73 Aligned_cols=261 Identities=23% Similarity=0.339 Sum_probs=206.2
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcCCC-cEEEEEEeecCCccchHHHHHHHHHHhccC-CCCcceEEee-eec------C
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLPSG-LTVAVKRFRASDKISTGAFSSEIATLSRIR-HRNIVRLLGW-GAN------R 844 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~-~~~------~ 844 (1117)
...++++.+.|.+|||+.||.|....+ ..||+|++...++.....+.+||++|++|+ |+|||.++|. ... .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 345788899999999999999986555 999999998888888888999999999996 9999999993 221 1
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
.++++.||||+||.|-+++..+...+ +++.++++|+.|+++|+++||.. .|+|||||||-+||||+.++..||||||-
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 35678999999999999998765444 99999999999999999999996 67899999999999999999999999999
Q ss_pred cccccCCCCCc-----cccCCccccccccCChhhh---ccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHH
Q 001238 925 ARLVEDDSGGS-----FSANPQFAGSYGYIAPEYA---NMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 925 a~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~ 996 (1117)
|.......... ....-....|+.|+|||++ .+..+++|+||||+||+||-|+....||+..-.
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------- 263 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------- 263 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---------
Confidence 87543322110 0111234689999999977 467899999999999999999999999975211
Q ss_pred HHHHhcCCCCccccCccc--C--CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 001238 997 RDHLKSKKDPVEVLDPKL--Q--GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEPA 1061 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l--~--~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~ 1061 (1117)
...++..+ + ..+...+..+++ .|++.+|++||++-+|...+-+++..+.
T Consensus 264 ----------laIlng~Y~~P~~p~ys~~l~~LI~------~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 264 ----------LAILNGNYSFPPFPNYSDRLKDLIR------TMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred ----------eeEEeccccCCCCccHHHHHHHHHH------HHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 11111111 1 122233444444 4999999999999999999988876544
No 42
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=8.6e-37 Score=334.76 Aligned_cols=206 Identities=23% Similarity=0.319 Sum_probs=178.2
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
..++|.+.+.||+|+||.||.|+. .+|..+|+|++++.. ....+.+..|-.+|....+|.||+++..|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 346899999999999999999974 469999999998763 3344567889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
||||++||++..+|... +.+++..++.++.+++.|++.+|+. |+|||||||+|+|||..|++||+|||++.-+.
T Consensus 219 iMEylPGGD~mTLL~~~---~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK---DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHHhc---CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 99999999999999875 4599999999999999999999999 99999999999999999999999999985432
Q ss_pred CCC-------------------CCccc-----c-------------------CCccccccccCChhhhccCCCCcCCCee
Q 001238 930 DDS-------------------GGSFS-----A-------------------NPQFAGSYGYIAPEYANMTKISEKSDVY 966 (1117)
Q Consensus 930 ~~~-------------------~~~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~ 966 (1117)
... ..... . ....+|||-|||||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 100 00000 0 0124799999999999999999999999
Q ss_pred ehhhhHHHHHhCCCCCCCC
Q 001238 967 SYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 967 SlG~vl~ell~g~~P~~~~ 985 (1117)
|+|||+|||+.|-+||.+.
T Consensus 373 SLG~ImyEmLvGyPPF~s~ 391 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSE 391 (550)
T ss_pred HHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999764
No 43
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=313.34 Aligned_cols=262 Identities=24% Similarity=0.288 Sum_probs=206.9
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccc--hHHHHHHHHHHhccCCCCcceEEeeee--cCCceEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKIS--TGAFSSEIATLSRIRHRNIVRLLGWGA--NRKTKLL 849 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~l 849 (1117)
.+.|...++|++|.||.||+|+. ++++.||+|+++...... .-.-.+||.++.+.+|||||.+..+.. +-+..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 35688889999999999999985 468899999998653211 123478999999999999999988654 3467899
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
|||||+. +|..++.... .++...++..++.|+++|++|||+. .|+|||+|++|+|+...|.+||+|||+||.++
T Consensus 155 VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999965 8998888765 3488899999999999999999999 99999999999999999999999999999986
Q ss_pred CCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.. ....+..+.|.+|.|||.+.+ ..|+++.|+||+|||+.||+++++-|.+. .....+..+++.-+.+.+
T Consensus 229 sp----~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~-----sE~dQl~~If~llGtPte 299 (419)
T KOG0663|consen 229 SP----LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK-----SEIDQLDKIFKLLGTPSE 299 (419)
T ss_pred CC----cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC-----chHHHHHHHHHHhCCCcc
Confidence 53 356778899999999997765 67999999999999999999999988653 334445555555566666
Q ss_pred ccCcccCCCCc-----------hhHHHH-------HHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1009 VLDPKLQGHPD-----------TQIQEM-------LQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1009 ~~~~~l~~~~~-----------~~~~~~-------l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.++|.+...+. ..++.- -....+....+..||.+|-|+.+.++
T Consensus 300 ~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 300 AIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 66665443221 011100 01223444577889999999999876
No 44
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-38 Score=310.00 Aligned_cols=267 Identities=22% Similarity=0.355 Sum_probs=208.1
Q ss_pred hccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecC-----Cce
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANR-----KTK 847 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 847 (1117)
..++|++.+.+|+|||+.||.++ ..+++.||+|++......+.+...+|++..++++|||+++++++...+ ...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45689999999999999999997 557889999999887777788899999999999999999999986543 348
Q ss_pred EEEEEecCCCChhhhhcCCCCCC-CCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAG-LLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLAR 926 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 926 (1117)
|++++|...|+|.+.+......+ .+++.+.++|+.++++||++||+. .|+++||||||.||++.+.+.+++.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999999998765444 799999999999999999999997 3469999999999999999999999999987
Q ss_pred cccCCCCCc-----cccCCccccccccCChhhhcc---CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHH
Q 001238 927 LVEDDSGGS-----FSANPQFAGSYGYIAPEYANM---TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRD 998 (1117)
Q Consensus 927 ~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~ 998 (1117)
...-.-.+. .........|..|.|||.+.. ...++++|||||||++|+|+.|.-||+.....+..+.-.+..
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n 257 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQN 257 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeec
Confidence 543221111 111223457899999998864 456889999999999999999999997543333322221111
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
. ....|+ ...+++...+ ++.+|++.||.+||++.+++..++.+
T Consensus 258 ~--------q~s~P~-~~~yse~l~~------lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 258 A--------QISIPN-SSRYSEALHQ------LIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred c--------ccccCC-CCCccHHHHH------HHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 0 011111 1123333344 44459999999999999999988765
No 45
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=363.61 Aligned_cols=264 Identities=29% Similarity=0.465 Sum_probs=208.1
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC--CCc----EEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecCCce
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP--SGL----TVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~--~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 847 (1117)
....+..+.||+|+||.||+|... .|. .||||.++.. +.++..+|.+|+.+|+++.|||||+++|++-+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 345667789999999999999743 243 4999998764 455677899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCCC----CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGEC----AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
++++|||++|+|..++++.+. ...+...+.+.++.|||+|+.||+++ ++|||||.++|+|+++...+||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999987632 23488899999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhc
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKS 1002 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~ 1002 (1117)
+|+.+.+.+. +.......-..+|||||.+.++.++.|+|||||||++||+++ |..||... ...++.. .....
T Consensus 848 lArDiy~~~y--yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~--~n~~v~~---~~~~g 920 (1025)
T KOG1095|consen 848 LARDIYDKDY--YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR--SNFEVLL---DVLEG 920 (1025)
T ss_pred hhHhhhhchh--eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc--chHHHHH---HHHhC
Confidence 9996654322 222222234578999999999999999999999999999999 99999642 2222222 12222
Q ss_pred CCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 001238 1003 KKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEPA 1061 (1117)
Q Consensus 1003 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~ 1061 (1117)
. . ++ ....+++ .+.+++.. ||+.+|++||+++.+++.++.+.....
T Consensus 921 g-R----L~-~P~~CP~-~ly~lM~~------CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 921 G-R----LD-PPSYCPE-KLYQLMLQ------CWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred C-c----cC-CCCCCCh-HHHHHHHH------HccCChhhCccHHHHHhhhhhhhhhhc
Confidence 2 1 11 1122333 33344443 999999999999999998888765443
No 46
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-37 Score=344.04 Aligned_cols=242 Identities=21% Similarity=0.324 Sum_probs=198.6
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 849 (1117)
.++|.+.++||+|.||+|+++..+ +++.+|||++++.. ..+.+....|.+++... +||.++.++.+|+..++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 357899999999999999999854 58899999998764 33455677888887777 59999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
||||+.||++..+.+. +.+++..+.-+|..|+.||+|||++ +|||||||.+|||+|.+|++||+|||+++..-
T Consensus 447 vmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999995444443 3499999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
-. .....+++|||.|||||++.+..|+.++|.|||||++|||+.|+.||.+. +++ +....++..
T Consensus 520 ~~----g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd--dEe---e~FdsI~~d------- 583 (694)
T KOG0694|consen 520 GQ----GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD--DEE---EVFDSIVND------- 583 (694)
T ss_pred CC----CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC--CHH---HHHHHHhcC-------
Confidence 21 13556899999999999999999999999999999999999999999752 222 223333222
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTM 1046 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~ 1046 (1117)
++.++...+.+...+++. .+..+|++|--+
T Consensus 584 -~~~yP~~ls~ea~~il~~------ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 -EVRYPRFLSKEAIAIMRR------LLRKNPEKRLGS 613 (694)
T ss_pred -CCCCCCcccHHHHHHHHH------HhccCcccccCC
Confidence 244555555555555554 788899999744
No 47
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-37 Score=323.34 Aligned_cols=248 Identities=25% Similarity=0.370 Sum_probs=204.4
Q ss_pred cCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCcc---chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKI---STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.+|++.+.||+|.||.|-+|. +..|+.||||.+++.... +.-.+++|+++|..++||||+.++.+|...+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 467888999999999999986 578999999999865433 3335789999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||..+|.|.+|+.+. +.+++.+++.+++||.+|+.|+|.+ ++||||+|.+|||+|.++++||+|||++-.+.+.
T Consensus 133 EYaS~GeLYDYiSer---~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 133 EYASGGELYDYISER---GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EecCCccHHHHHHHh---ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 999999999999875 3499999999999999999999999 9999999999999999999999999999887643
Q ss_pred CCCccccCCccccccccCChhhhccCCCC-cCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKIS-EKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.-.++++|++-|.+||++.+.+|. +.+|.||+||++|.++.|..||++ .+....++++-.... .
T Consensus 207 -----kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG-----~Dhk~lvrQIs~GaY-----r 271 (668)
T KOG0611|consen 207 -----KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG-----RDHKRLVRQISRGAY-----R 271 (668)
T ss_pred -----cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC-----chHHHHHHHhhcccc-----c
Confidence 234578999999999999999985 899999999999999999999975 223333333322221 1
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
.|.-+......++ |++..+|++|.|..+|...+.
T Consensus 272 EP~~PSdA~gLIR----------wmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 272 EPETPSDASGLIR----------WMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred CCCCCchHHHHHH----------HHHhcCcccchhHHHHhhhhe
Confidence 1222222222333 355569999999999988664
No 48
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.2e-36 Score=343.07 Aligned_cols=244 Identities=22% Similarity=0.321 Sum_probs=198.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.+|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46888899999999999999864 68999999987532 223456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA---GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 999999999998764 3478899999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.........
T Consensus 172 -------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~-----~~~~~~~~i~~~~-------- 231 (329)
T PTZ00263 172 -------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD-----TPFRIYEKILAGR-------- 231 (329)
T ss_pred -------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC-----CHHHHHHHHhcCC--------
Confidence 12357999999999999999999999999999999999999999642 1222222222221
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCC-----HHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPT-----MKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs-----~~~v~~ 1051 (1117)
..++...+....++++. |++.||.+||+ +++++.
T Consensus 232 ~~~p~~~~~~~~~li~~------~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 232 LKFPNWFDGRARDLVKG------LLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred cCCCCCCCHHHHHHHHH------HhhcCHHHcCCCCCCCHHHHhc
Confidence 11223334455555555 99999999996 566654
No 49
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-37 Score=304.26 Aligned_cols=250 Identities=25% Similarity=0.375 Sum_probs=206.6
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
-++|.+++.||+|.||.||.|+. +++..||+|++.+. ......++.+|+++-..++||||.++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 35789999999999999999984 56788999998654 233456799999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
+||.++|++...++.... ..+++.....++.|+|.|+.|+|.+ +++||||||+|+|++.++..|++|||-+.....
T Consensus 101 lEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence 999999999999986543 3488899999999999999999999 999999999999999999999999999875432
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
..+.+.+||.-|.+||...+..++..+|+|++|+..||++.|.+||.... .......++ +.+.
T Consensus 177 ------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~~etYkrI~---k~~~------ 239 (281)
T KOG0580|consen 177 ------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--HSETYKRIR---KVDL------ 239 (281)
T ss_pred ------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--hHHHHHHHH---Hccc------
Confidence 35567899999999999999999999999999999999999999997643 222222222 2211
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
.++...+...++++.. |+..+|.+|.+..|+++.-
T Consensus 240 --~~p~~is~~a~dlI~~------ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 240 --KFPSTISGGAADLISR------LLVKNPIERLALTEVMDHP 274 (281)
T ss_pred --cCCcccChhHHHHHHH------HhccCccccccHHHHhhhH
Confidence 1122333445555554 9999999999999998753
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.2e-36 Score=335.27 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=198.3
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
.|+..+.||+|+||+||+|.. .+|+.||+|++.... ......+.+|++++++++|++|+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999975 578999999987532 2223457889999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999888765332 2488999999999999999999999 99999999999999999999999999998754321
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... .....+....... . .
T Consensus 157 -----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~~---~----~ 222 (285)
T cd05631 157 -----TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER--VKREEVDRRVKED---Q----E 222 (285)
T ss_pred -----eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc--hhHHHHHHHhhcc---c----c
Confidence 123457899999999999999999999999999999999999999753221 1111122111111 0 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCC-----HHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPT-----MKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs-----~~~v~~ 1051 (1117)
.+....+..+..+++. |++.||++||+ ++++++
T Consensus 223 ~~~~~~s~~~~~li~~------~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 223 EYSEKFSEDAKSICRM------LLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cCCccCCHHHHHHHHH------HhhcCHHHhcCCCCCCHHHHhc
Confidence 1223344455555555 99999999997 777776
No 51
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=324.65 Aligned_cols=257 Identities=21% Similarity=0.294 Sum_probs=195.5
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--------------ccchHHHHHHHHHHhccCCCCcceEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--------------KISTGAFSSEIATLSRIRHRNIVRLL 838 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--------------~~~~~~~~~E~~~l~~l~H~niv~l~ 838 (1117)
.-++|++.+.||+|.||.|-+|+. .+++.||||++.+.. ....+..++||.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 357899999999999999999974 468999999986431 11234788999999999999999999
Q ss_pred eeeecC--CceEEEEEecCCCChhhhhcCCCCCCC-CCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC
Q 001238 839 GWGANR--KTKLLFYDYMPNGTLGMLLHDGECAGL-LEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY 915 (1117)
Q Consensus 839 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~ 915 (1117)
.+..+. +..|+|+|||..|.+...=. .++ +.+.++++++++++.||+|||.+ +||||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~----d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPP----DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCC----CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 988765 57899999999888754322 233 89999999999999999999999 999999999999999999
Q ss_pred cceeccccccccccCCCCC-ccccCCccccccccCChhhhccCC----CCcCCCeeehhhhHHHHHhCCCCCCCCCCCCh
Q 001238 916 ESCLADFGLARLVEDDSGG-SFSANPQFAGSYGYIAPEYANMTK----ISEKSDVYSYGVVLLEIITGKKPVDASFPDGQ 990 (1117)
Q Consensus 916 ~~kl~DfGla~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~ 990 (1117)
++||+|||.+......... ........+|||.|+|||...++. .+.+.||||+||++|.|+.|+.||-+ +
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~-----~ 322 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD-----D 322 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc-----c
Confidence 9999999999866433211 112223468999999999887632 35789999999999999999999964 2
Q ss_pred hHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 991 HVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
...+...++....-.. |..+ ...+..+.+++ .++.+||++|.+..+|.....
T Consensus 323 ~~~~l~~KIvn~pL~f-----P~~p-e~~e~~kDli~------~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 323 FELELFDKIVNDPLEF-----PENP-EINEDLKDLIK------RLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred hHHHHHHHHhcCcccC-----CCcc-cccHHHHHHHH------HHhhcChhheeehhhheecce
Confidence 3334344433222111 1111 11223344443 488889999999998876543
No 52
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.9e-36 Score=339.03 Aligned_cols=243 Identities=24% Similarity=0.327 Sum_probs=199.1
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
+|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 6888999999999999999864 68999999987532 1234568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 82 YVPGGELFSYLRNS---GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred CCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 99999999998764 3488999999999999999999999 9999999999999999999999999999866431
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||... ..............
T Consensus 155 ------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~-------- 215 (291)
T cd05612 155 ------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD-----NPFGIYEKILAGKL-------- 215 (291)
T ss_pred ------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCc--------
Confidence 12356899999999999889999999999999999999999999642 12222233222221
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCC-----HHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPT-----MKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs-----~~~v~~ 1051 (1117)
.++...+..+.++++. |++.||.+||+ +.++++
T Consensus 216 ~~~~~~~~~~~~li~~------~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 216 EFPRHLDLYAKDLIKK------LLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred CCCccCCHHHHHHHHH------HcCCCHHHccCCccCCHHHHhc
Confidence 1223334456666665 99999999995 777665
No 53
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.2e-36 Score=341.33 Aligned_cols=241 Identities=21% Similarity=0.278 Sum_probs=194.9
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNG 857 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 857 (1117)
+.||+|+||.||+|.. .+|+.||+|+++... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999975 468999999997532 223456778999999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccc
Q 001238 858 TLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFS 937 (1117)
Q Consensus 858 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 937 (1117)
+|.+++... +.+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~----~ 150 (323)
T cd05571 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG----A 150 (323)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC----C
Confidence 999988754 3489999999999999999999999 99999999999999999999999999997543211 1
Q ss_pred cCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCC
Q 001238 938 ANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGH 1017 (1117)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1017 (1117)
......||+.|+|||++.+..++.++||||+||++|||++|+.||... ............. ..++..
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~~~~~~--------~~~p~~ 217 (323)
T cd05571 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEE--------IRFPRT 217 (323)
T ss_pred cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcCC--------CCCCCC
Confidence 223467999999999999999999999999999999999999999642 1112222222211 122333
Q ss_pred CchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1018 PDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1018 ~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
.+..+.++++. |++.||++|| ++.++++
T Consensus 218 ~~~~~~~li~~------~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 218 LSPEAKSLLAG------LLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCHHHHHHHHH------HccCCHHHcCCCCCCCHHHHHc
Confidence 44556666655 9999999999 7888865
No 54
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.3e-36 Score=348.30 Aligned_cols=261 Identities=28% Similarity=0.423 Sum_probs=202.0
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCc
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 846 (1117)
.++|++.+.||+|+||.||+|.+ .++..||||+++... ......+.+|+++++.+ +|||||++++++...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 34788999999999999999863 234589999997543 22345688999999999 89999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCC-----------------------------------------------------------
Q 001238 847 KLLFYDYMPNGTLGMLLHDGE----------------------------------------------------------- 867 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 867 (1117)
.++||||+++|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999999885421
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccC
Q 001238 868 --------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSAN 939 (1117)
Q Consensus 868 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 939 (1117)
....+++.++++++.||++||+|||++ +|+||||||+||++++++.+||+|||+++....... ....
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~--~~~~ 271 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN--YVVK 271 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc--eeec
Confidence 012478889999999999999999999 999999999999999999999999999986643211 1122
Q ss_pred CccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCC
Q 001238 940 PQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHP 1018 (1117)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1018 (1117)
....++..|+|||++....++.++|||||||++|||++ |+.||...... ..... ....... +..+...
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-~~~~~----~~~~~~~------~~~~~~~ 340 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-SKFYK----MVKRGYQ------MSRPDFA 340 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-HHHHH----HHHcccC------ccCCCCC
Confidence 23345678999999988899999999999999999997 99999653221 11111 1111111 1112222
Q ss_pred chhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1019 DTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1019 ~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
+..+.+++.. ||+.||++||++.+|+++|+++.
T Consensus 341 ~~~l~~li~~------cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 341 PPEIYSIMKM------CWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CHHHHHHHHH------HcCCChhhCcCHHHHHHHHHHHh
Confidence 3345555544 99999999999999999998864
No 55
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3e-36 Score=348.94 Aligned_cols=260 Identities=27% Similarity=0.394 Sum_probs=202.1
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCc
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 846 (1117)
.++|++.+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||+++++++.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45789999999999999999863 246689999987543 23345788999999999 89999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCCC----------------------------------------------------------
Q 001238 847 KLLFYDYMPNGTLGMLLHDGEC---------------------------------------------------------- 868 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 868 (1117)
.++||||+++|+|.++++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999998864320
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 869 --------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 869 --------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
...+++..+.+++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 269 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN- 269 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc-
Confidence 12478889999999999999999999 999999999999999999999999999987643221
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
........++..|+|||++.+..++.++|||||||++|||++ |..||..... .......+. .... +.
T Consensus 270 -~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-~~~~~~~~~----~~~~------~~ 337 (375)
T cd05104 270 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-DSKFYKMIK----EGYR------ML 337 (375)
T ss_pred -ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-hHHHHHHHH----hCcc------CC
Confidence 112223345678999999999999999999999999999998 8999865322 122222222 1111 01
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
.+...+..+.+++. .|++.||++||++.+|++.|++.
T Consensus 338 ~~~~~~~~l~~li~------~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 338 SPECAPSEMYDIMK------SCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCHHHHHHHH------HHccCChhHCcCHHHHHHHHHhh
Confidence 11222334444444 49999999999999999999863
No 56
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.3e-36 Score=341.72 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=199.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||.||+|+.. +++.||||+++... ......+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999865 58999999997542 223456888999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL---GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 999999999999754 3488999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....... ......+
T Consensus 154 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~-~~~~~~~ 224 (333)
T cd05600 154 ------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP--NETWENLKYWKETL-QRPVYDD 224 (333)
T ss_pred ------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH--HHHHHHHHhccccc-cCCCCCc
Confidence 22345799999999999989999999999999999999999999965311 11111111110000 0000001
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
+. ...+..+.+++.. |+..+|++||++.++++.
T Consensus 225 ~~--~~~s~~~~~li~~------~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 225 PR--FNLSDEAWDLITK------LINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cc--cccCHHHHHHHHH------HhhChhhhcCCHHHHHhC
Confidence 10 1123344444444 999999999999999874
No 57
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=365.03 Aligned_cols=463 Identities=28% Similarity=0.357 Sum_probs=373.6
Q ss_pred EEEEecccccccCcCCccccccccCCeEeccCCCCCCCchhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccC
Q 001238 76 VVGLDLRYVDLLGHVPTNFTSLLSLNRLVLSGTNLTGSIPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNS 155 (1117)
Q Consensus 76 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 155 (1117)
++.++++.+-+....-+.+.+-.+|+.|+|++|++. .+|..+..+.+|+.|+++.|.++ .+|.+.+.+.+|++|.|..
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheecc
Confidence 667777776654432234555666999999999997 89999999999999999999998 8999999999999999999
Q ss_pred CCcCCCCchhccCCcCCcEEeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccC
Q 001238 156 NQLEGAIPIQIGNLSSLTQLFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFL 235 (1117)
Q Consensus 156 N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~l 235 (1117)
|++. .+|.++..+.+|+.|+++.|++. .+|..+..++.++.+..++|.. ...++ ...
T Consensus 101 n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~-~~~lg----~~~---------------- 157 (1081)
T KOG0618|consen 101 NRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEK-IQRLG----QTS---------------- 157 (1081)
T ss_pred chhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchh-hhhhc----ccc----------------
Confidence 9999 99999999999999999999997 7999999999999999999931 11111 111
Q ss_pred CcccccccccceeecccccccccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCC
Q 001238 236 PPTLGLLKRLQTIAIYTALLSGQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCS 315 (1117)
Q Consensus 236 p~~l~~l~~L~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 315 (1117)
.+.+++..+.+.+.++.++..++. .|+|.+|.+. -..+.++.+|+.|....|+++... -.-+
T Consensus 158 ---------ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~----~~g~ 219 (1081)
T KOG0618|consen 158 ---------IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE----ISGP 219 (1081)
T ss_pred ---------chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE----ecCc
Confidence 344555666666677777777776 6889888887 234667788889999999887431 2347
Q ss_pred CCCEEEcCCCcCCCCCccccCCCCCcceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhc
Q 001238 316 QLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVW 395 (1117)
Q Consensus 316 ~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 395 (1117)
+|+.|+.++|.++...+. ..-.+|+++++++|+++ .+|.+++.+.+|+.++..+|+++ .+|..+....+|+.|.+.
T Consensus 220 ~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~ 295 (1081)
T KOG0618|consen 220 SLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAA 295 (1081)
T ss_pred chheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhh
Confidence 889999999999843332 22358999999999999 56699999999999999999997 788888889999999999
Q ss_pred cccccccCCCCCCcccccceeecccccccCCCcccccC-CC-CCCeeeccCccCCCCCCCCcccccccceeccCCCcccc
Q 001238 396 HNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPRGIFQ-LK-KLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTG 473 (1117)
Q Consensus 396 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 473 (1117)
+|.++ .+|.....++.|++|+|..|+|. ..|..+.. +. .|..|+.+.|++.....-.=..++.|+.|++.+|.+++
T Consensus 296 ~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 296 YNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 99999 77888888999999999999998 56665543 33 47889999999985542233346789999999999999
Q ss_pred cCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCCceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCC
Q 001238 474 FIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGS 553 (1117)
Q Consensus 474 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 553 (1117)
...+.+.+.+.|+.|+|++|+|.......+.++..|+.|+||+|+++ .+|.....+..|++|...+|+|..++ .+..
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~fP--e~~~ 450 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSFP--ELAQ 450 (1081)
T ss_pred cchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeech--hhhh
Confidence 88889999999999999999998555556789999999999999999 67899999999999999999988665 6777
Q ss_pred CccccEEeccccccCCCCCcccccccceeEEeccccc
Q 001238 554 LSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDLSSNQ 590 (1117)
Q Consensus 554 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 590 (1117)
+++|+.+|++.|+|+...-..-..-++|++|||++|.
T Consensus 451 l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 451 LPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred cCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 7888888888888774332222222677777777776
No 58
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=9.1e-36 Score=336.96 Aligned_cols=237 Identities=24% Similarity=0.300 Sum_probs=191.5
Q ss_pred eeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 784 IGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
||+|+||.||+|... +++.||+|+++.. .......+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999854 5889999998753 223345678899999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccC
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSAN 939 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 939 (1117)
.+++... +.+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----~~~ 150 (312)
T cd05585 81 FHHLQRE---GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD----DKT 150 (312)
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC----Ccc
Confidence 9998764 3489999999999999999999999 99999999999999999999999999998643221 122
Q ss_pred CccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 940 PQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
....||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+......... ..++...+
T Consensus 151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~~~~~~~~~--------~~~~~~~~ 217 (312)
T cd05585 151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEMYRKILQEP--------LRFPDGFD 217 (312)
T ss_pred ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHHHHHHHcCC--------CCCCCcCC
Confidence 3457999999999999999999999999999999999999999642 2233333333222 12223344
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCCCHHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRPTMKDV 1049 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v 1049 (1117)
..+.+++.. |++.||++||++..+
T Consensus 218 ~~~~~li~~------~L~~dp~~R~~~~~~ 241 (312)
T cd05585 218 RDAKDLLIG------LLSRDPTRRLGYNGA 241 (312)
T ss_pred HHHHHHHHH------HcCCCHHHcCCCCCH
Confidence 455666555 999999999864333
No 59
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-36 Score=333.68 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=210.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCc-eEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT-KLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lv~ 851 (1117)
++|..++++|+|+||.++.++++ ++..||+|++.-... ........|+.++++++|||||.+++.|.+++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46888899999999999998754 578999999875432 233457889999999999999999999999888 89999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
+|++||++.+.+.+.+ ...++++++.+++.|++.|+.|||++ +|+|||||+.||+++.++.+||+|||+|+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998865 35589999999999999999999988 9999999999999999999999999999988754
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
. ....+.+||+.||.||.+.+.+|..|+||||+||++|||++-+++|.+. +....+.+..+...
T Consensus 160 ~----~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-----~m~~Li~ki~~~~~------- 223 (426)
T KOG0589|consen 160 D----SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-----NMSELILKINRGLY------- 223 (426)
T ss_pred h----hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-----chHHHHHHHhhccC-------
Confidence 3 2344678999999999999999999999999999999999999999753 33344444443331
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
..++..+....+.+++- |++.+|+.||++.+++..
T Consensus 224 ~Plp~~ys~el~~lv~~------~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKS------MLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCccccHHHHHHHHH------HhhcCCccCCCHHHHhhC
Confidence 22344555566666655 999999999999999875
No 60
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.2e-35 Score=328.20 Aligned_cols=255 Identities=24% Similarity=0.396 Sum_probs=200.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC----CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP----SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++|++.+.||+|+||.||+|.++ .+..||+|+++.... .....|.+|++++++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888999999999999999642 467899999876532 2345688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++|+|.+++.... +.+++.+++.++.|++.||+|||++ +++||||||+||+++.++.++++|||.+.....
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 85 TEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999999987642 3489999999999999999999999 999999999999999999999999998765432
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.. ........++..|+|||.+....++.++|||||||++||+++ |+.||.... .. ..+... ......
T Consensus 160 ~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~--~~---~~~~~~-~~~~~~--- 227 (266)
T cd05064 160 EA---IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS--GQ---DVIKAV-EDGFRL--- 227 (266)
T ss_pred cc---hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC--HH---HHHHHH-HCCCCC---
Confidence 11 111112345678999999999999999999999999999775 999996431 11 222221 111111
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
..+...+..+.+++. .||+.+|++||++.++.+.|+++
T Consensus 228 ---~~~~~~~~~~~~li~------~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 ---PAPRNCPNLLHQLML------DCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---CCCCCCCHHHHHHHH------HHcCCCchhCCCHHHHHHHHHhh
Confidence 112233344444444 49999999999999999998764
No 61
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-38 Score=307.33 Aligned_cols=251 Identities=23% Similarity=0.300 Sum_probs=198.9
Q ss_pred ccCCCCCCeeeecCCeEEEEE-EcCCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKV-TLPSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~-~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++.|.+.+.||+|.|+.||+. ..++|+.+|+|++... .....+.+.+|+++.+.++|||||++.+.+.+.+..|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 456888899999999999996 4568999999987533 2335678999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC---CCcceeccccccccc
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE---RYESCLADFGLARLV 928 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfGla~~~ 928 (1117)
|+|.|++|..-+-.+ ..+++..+-.+++||++||.|+|.+ +|||||+||+|+++-. ...+|++|||+|..+
T Consensus 90 e~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 999999996544432 2378889999999999999999999 9999999999999953 346899999999988
Q ss_pred cCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.++ .....++|||+|||||+....+|+..+|||+.||++|-++.|.+||.+. +-....+++.+...+...
T Consensus 164 ~~g-----~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~-----~~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 164 NDG-----EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-----DQHRLYEQIKAGAYDYPS 233 (355)
T ss_pred CCc-----cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc-----cHHHHHHHHhccccCCCC
Confidence 732 2345678999999999999999999999999999999999999999642 222333333333333322
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..++ ...+..+.+++. ++..||.+|.|+.|.+.
T Consensus 234 ~~w~----~is~~Ak~Lvrr------ML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 234 PEWD----TVTPEAKSLIRR------MLTVNPKKRITADEALK 266 (355)
T ss_pred cccC----cCCHHHHHHHHH------HhccChhhhccHHHHhC
Confidence 2222 223344454444 77779999999887643
No 62
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.2e-35 Score=335.20 Aligned_cols=241 Identities=21% Similarity=0.281 Sum_probs=193.9
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNG 857 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 857 (1117)
+.||+|+||.||++.. .+|+.||+|+++.. .......+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999975 46899999999753 2223456778999999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccc
Q 001238 858 TLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFS 937 (1117)
Q Consensus 858 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 937 (1117)
+|..++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~----~ 150 (323)
T cd05595 81 ELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG----A 150 (323)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC----C
Confidence 999888754 2488999999999999999999999 99999999999999999999999999987543211 1
Q ss_pred cCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCC
Q 001238 938 ANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGH 1017 (1117)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1017 (1117)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ ..++..
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~~~~~~~~~~~--------~~~p~~ 217 (323)
T cd05595 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILMEE--------IRFPRT 217 (323)
T ss_pred ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCC--------CCCCCC
Confidence 2234579999999999998999999999999999999999999996421 112222222211 112233
Q ss_pred CchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1018 PDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1018 ~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
.+..++++++. |++.||++|| ++.++++
T Consensus 218 ~~~~~~~li~~------~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 218 LSPEAKSLLAG------LLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCHHHHHHHHH------HccCCHHHhCCCCCCCHHHHHc
Confidence 44556666665 9999999998 7888765
No 63
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=9.7e-36 Score=339.67 Aligned_cols=244 Identities=23% Similarity=0.277 Sum_probs=197.6
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC--CcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS--GLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++|++.+.||+|+||.||+|.... +..||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468889999999999999997433 368999998643 222345688899999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999997643 488999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 184 ~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~i~~~~~------ 245 (340)
T PTZ00426 184 R-------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE-----PLLIYQKILEGII------ 245 (340)
T ss_pred C-------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC-----HHHHHHHHhcCCC------
Confidence 1 224579999999999998889999999999999999999999996421 1122222222111
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
.++...+....++++. |++.+|++|+ +++++.+
T Consensus 246 --~~p~~~~~~~~~li~~------~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 246 --YFPKFLDNNCKHLMKK------LLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred --CCCCCCCHHHHHHHHH------HcccCHHHcCCCCCCCHHHHHc
Confidence 1223334455555555 9999999995 7877765
No 64
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.2e-35 Score=335.92 Aligned_cols=242 Identities=22% Similarity=0.284 Sum_probs=194.8
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNG 857 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 857 (1117)
+.||+|+||.||+++. .+|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999975 468999999997542 233456788999999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccc
Q 001238 858 TLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFS 937 (1117)
Q Consensus 858 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 937 (1117)
+|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~----~ 150 (328)
T cd05593 81 ELFFHLSRE---RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA----A 150 (328)
T ss_pred CHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc----c
Confidence 999888654 3488999999999999999999999 99999999999999999999999999987543211 1
Q ss_pred cCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCC
Q 001238 938 ANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGH 1017 (1117)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1017 (1117)
......||+.|+|||++.+..++.++|||||||++|||++|+.||... ............. ..++..
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~-----~~~~~~~~~~~~~--------~~~p~~ 217 (328)
T cd05593 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMED--------IKFPRT 217 (328)
T ss_pred ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC-----CHHHHHHHhccCC--------ccCCCC
Confidence 223457999999999999889999999999999999999999999642 1122222222111 122333
Q ss_pred CchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHHH
Q 001238 1018 PDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAAL 1052 (1117)
Q Consensus 1018 ~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~~ 1052 (1117)
.+....++++. |++.||++|| ++.++++.
T Consensus 218 ~~~~~~~li~~------~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 LSADAKSLLSG------LLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCHHHHHHHHH------HcCCCHHHcCCCCCCCHHHHhcC
Confidence 44455555555 9999999997 88888763
No 65
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=313.75 Aligned_cols=263 Identities=23% Similarity=0.274 Sum_probs=203.2
Q ss_pred CCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCC-cceEEeeeecCC------c
Q 001238 777 SLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRN-IVRLLGWGANRK------T 846 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~------~ 846 (1117)
.|...++||+|+||+||+|+ ..+|+.||+|+++-..+ .......+|+.++++++|+| ||++++++.... .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 45566789999999999997 45789999999986533 23345689999999999999 999999998877 7
Q ss_pred eEEEEEecCCCChhhhhcCCCCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECA-GLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
.++|+||+ .-+|..++...... ..++...+..+++|+++||+|||++ +|+||||||+||+++++|.+||+|||+|
T Consensus 92 l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchH
Confidence 88999999 46899998875432 2367789999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKK 1004 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1117)
+...-. ....+..++|.+|.|||++.+. .|++..||||+||+++||+++++-|.+.. ..+....+.+.-+
T Consensus 168 ra~~ip----~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s-----e~~ql~~If~~lG 238 (323)
T KOG0594|consen 168 RAFSIP----MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS-----EIDQLFRIFRLLG 238 (323)
T ss_pred HHhcCC----cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHHcC
Confidence 976532 2345667899999999988764 79999999999999999999998886532 2444444444444
Q ss_pred CCccccCcccCCCC-----------chhHHHH-----HHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1005 DPVEVLDPKLQGHP-----------DTQIQEM-----LQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1005 ~~~~~~~~~l~~~~-----------~~~~~~~-----l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.+.+..+|.....+ ...+..+ -...++..+|++.+|.+|.+++.++++
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 44443333322111 0111111 133455666999999999999988774
No 66
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.4e-35 Score=340.69 Aligned_cols=203 Identities=24% Similarity=0.332 Sum_probs=174.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||+||+|.. .+++.||||+++... ......+.+|++++++++||||+++++.+.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 3688899999999999999975 468999999997532 223356788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKK---DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 999999999998764 3489999999999999999999999 9999999999999999999999999999765321
Q ss_pred CCCc-------------------------------cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCC
Q 001238 932 SGGS-------------------------------FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKK 980 (1117)
Q Consensus 932 ~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~ 980 (1117)
.... .......+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 1000 001124579999999999999999999999999999999999999
Q ss_pred CCCC
Q 001238 981 PVDA 984 (1117)
Q Consensus 981 P~~~ 984 (1117)
||..
T Consensus 235 Pf~~ 238 (363)
T cd05628 235 PFCS 238 (363)
T ss_pred CCCC
Confidence 9964
No 67
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3e-35 Score=323.10 Aligned_cols=251 Identities=26% Similarity=0.424 Sum_probs=200.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
.+|++.+.||+|+||.||+|.++++..||+|.+... ....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 357788999999999999999888889999988643 3345678999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|+|.++++... +.+++..+..++.|++.||+|||++ +|+||||||+||++++++.+|++|||.++......
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~--- 154 (256)
T cd05114 83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE--- 154 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc---
Confidence 999999987543 3488999999999999999999999 99999999999999999999999999998654321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
........++..|+|||++....++.++||||||+++|||++ |+.||... . ..+.+......... ..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~--~---~~~~~~~i~~~~~~----~~--- 222 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK--S---NYEVVEMISRGFRL----YR--- 222 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC--C---HHHHHHHHHCCCCC----CC---
Confidence 111223345678999999988889999999999999999999 89998642 1 12222222221110 01
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
+...+..+. .++..||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~------~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLASMTVY------EVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCHHHH------HHHHHHccCCcccCcCHHHHHHhh
Confidence 111222333 345559999999999999999876
No 68
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2e-35 Score=343.59 Aligned_cols=257 Identities=21% Similarity=0.270 Sum_probs=195.2
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
.|++++.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 477889999999999999974 568899999997542 2234568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987643 488899999999999999999999 99999999999999999999999999986432110
Q ss_pred CCc-------------------------------------------cccCCccccccccCChhhhccCCCCcCCCeeehh
Q 001238 933 GGS-------------------------------------------FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYG 969 (1117)
Q Consensus 933 ~~~-------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG 969 (1117)
... .......+||+.|+|||++....++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 000 0011235799999999999988999999999999
Q ss_pred hhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHH
Q 001238 970 VVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDV 1049 (1117)
Q Consensus 970 ~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v 1049 (1117)
|++|||++|+.||..... .............. . .+. ....+....+++.. +.|...+|..||++.++
T Consensus 236 ~il~elltG~~Pf~~~~~-----~~~~~~i~~~~~~~-~--~~~-~~~~s~~~~dli~~----ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 236 VILFEMLVGQPPFLAPTP-----TETQLKVINWENTL-H--IPP-QVKLSPEAVDLITK----LCCSAEERLGRNGADDI 302 (381)
T ss_pred hHHHHHHhCCCCCcCCCH-----HHHHHHHHcccccc-C--CCC-CCCCCHHHHHHHHH----HccCcccccCCCCHHHH
Confidence 999999999999965321 11111111111000 0 011 01122334444433 23677778889999999
Q ss_pred HHH
Q 001238 1050 AAL 1052 (1117)
Q Consensus 1050 ~~~ 1052 (1117)
++.
T Consensus 303 l~h 305 (381)
T cd05626 303 KAH 305 (381)
T ss_pred hcC
Confidence 773
No 69
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.5e-35 Score=329.61 Aligned_cols=199 Identities=27% Similarity=0.367 Sum_probs=170.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
++|.+.++||+|+||+||+|.. .+++.||+|+++... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 4688899999999999999975 468899999987542 22345678999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~- 157 (288)
T cd07871 85 LDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT- 157 (288)
T ss_pred CCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-
Confidence 975 8888876542 3478899999999999999999999 99999999999999999999999999997653221
Q ss_pred CccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~ 206 (288)
T cd07871 158 ---KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPG 206 (288)
T ss_pred ---ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 12234568999999998865 5689999999999999999999999965
No 70
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-36 Score=313.35 Aligned_cols=202 Identities=27% Similarity=0.405 Sum_probs=174.9
Q ss_pred hccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeec--CCccchHHHHHHHHHHhccCCCCcceEEeeeec-----CC
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRA--SDKISTGAFSSEIATLSRIRHRNIVRLLGWGAN-----RK 845 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~ 845 (1117)
....|...+.||+|+||.|+.+. ..+|+.||||++.. ......++..+|+++++.++|+||+.+++.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 44566668999999999999986 45789999999873 345556788899999999999999999998765 34
Q ss_pred ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
..|+|+|+| +.+|...++.+. .++.+.+..+++|+++||.|+|+. +|+|||+||+|++++.+...||+|||+|
T Consensus 100 DvYiV~elM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 679999999 679999998753 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhh-ccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYA-NMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
|..... ......+..+.|.+|.|||.+ ...+|+.+.||||.|||+.||++|++-|.+
T Consensus 173 R~~~~~--~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG 230 (359)
T KOG0660|consen 173 RYLDKF--FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPG 230 (359)
T ss_pred eecccc--CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCC
Confidence 987643 222345678899999999976 457899999999999999999999999865
No 71
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.5e-35 Score=333.81 Aligned_cols=241 Identities=25% Similarity=0.371 Sum_probs=193.3
Q ss_pred CeeeecCCeEEEEEEc----CCCcEEEEEEeecCC----ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 782 NIIGQGRSGIVYKVTL----PSGLTVAVKRFRASD----KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+.||+|+||.||+++. .+++.||+|+++... ......+.+|+++++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999874 357899999987531 22334578899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++|+|.+++... +.+.+..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 154 (323)
T cd05584 82 LSGGELFMHLERE---GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG- 154 (323)
T ss_pred CCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-
Confidence 9999999998754 3478889999999999999999999 99999999999999999999999999997543221
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.......||+.|+|||++....++.++|||||||++|||++|+.||... .....+........ .
T Consensus 155 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~-----~~~~~~~~~~~~~~--------~ 218 (323)
T cd05584 155 ---TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE-----NRKKTIDKILKGKL--------N 218 (323)
T ss_pred ---CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCC--------C
Confidence 1223457999999999999888999999999999999999999999642 12222333322221 1
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
++...+..+.++++. |++.+|++|| ++.++.+
T Consensus 219 ~~~~~~~~~~~li~~------~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 219 LPPYLTPEARDLLKK------LLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCCCHHHHHHHHH------HcccCHhHcCCCCCCCHHHHhc
Confidence 222334455555555 9999999999 7777765
No 72
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.3e-35 Score=322.97 Aligned_cols=255 Identities=27% Similarity=0.476 Sum_probs=203.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|++.++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 4688899999999999999998788899999987543 245688999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.++++... ...+++.+++.++.|+++||+|||+. +++||||||+||++++++.++|+|||+++......
T Consensus 85 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 157 (261)
T cd05072 85 KGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE--- 157 (261)
T ss_pred CCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCc---
Confidence 999999987643 23488899999999999999999998 99999999999999999999999999998764321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
........++..|+|||++....++.++|||||||++|||++ |+.||.... .......+ ...... +.
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~----~~~~~~-----~~- 225 (261)
T cd05072 158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVMSAL----QRGYRM-----PR- 225 (261)
T ss_pred eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHHHHH----HcCCCC-----CC-
Confidence 112223346778999999988889999999999999999998 999996421 11222221 111111 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
....+..+.+++ ..|++.+|++||+++++.++|+++
T Consensus 226 ~~~~~~~~~~li------~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 226 MENCPDELYDIM------KTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCCHHHHHHH------HHHccCCcccCcCHHHHHHHHhcC
Confidence 112233444444 459999999999999999999863
No 73
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.6e-35 Score=335.49 Aligned_cols=251 Identities=22% Similarity=0.288 Sum_probs=197.1
Q ss_pred CCCCCCeeeecCCeEEEEEEc----CCCcEEEEEEeecC----CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCce
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL----PSGLTVAVKRFRAS----DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 847 (1117)
+|++.+.||+|+||+||+++. .+++.||+|++... .....+.+.+|+++++.+ +||+|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999874 35889999998743 222345678899999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR---DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 9999999999999988754 2388999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCC
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDP 1006 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1117)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .............
T Consensus 155 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~~~~~~~~~---- 226 (332)
T cd05614 155 FLSEEK---ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-NTQSEVSRRILKC---- 226 (332)
T ss_pred ccccCC---CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-CCHHHHHHHHhcC----
Confidence 543221 122345799999999998764 4789999999999999999999999643221 1112222222221
Q ss_pred ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1007 VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1007 ~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
++.++...+..+.++++. |++.||++|| +++++++
T Consensus 227 ----~~~~~~~~~~~~~~li~~------~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 ----DPPFPSFIGPEAQDLLHK------LLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ----CCCCCCCCCHHHHHHHHH------HcCCCHHHcCCCCCCCHHHHHc
Confidence 122333444556666665 9999999999 6667765
No 74
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.2e-35 Score=335.31 Aligned_cols=198 Identities=29% Similarity=0.425 Sum_probs=174.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
++|++.+.||+|+||.||++... +|..||+|++.... ....+++.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57889999999999999999754 68899999987542 22345789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++|+|.+++.... .+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 85 MDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 99999999997643 3889999999999999999999852 6999999999999999999999999999866432
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 12345789999999999988999999999999999999999999964
No 75
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.6e-35 Score=340.50 Aligned_cols=263 Identities=26% Similarity=0.392 Sum_probs=203.2
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCCc-cchHHHHHHHHHHhccC-CCCcceEEeeeecCC
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIR-HRNIVRLLGWGANRK 845 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 845 (1117)
..++|.++++||+|+||.||+|... .+..||||+++.... ...+.+.+|+++++++. |||||++++++.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3568999999999999999998742 234799999975432 23457899999999996 999999999999999
Q ss_pred ceEEEEEecCCCChhhhhcCCCC---------------------------------------------------------
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGEC--------------------------------------------------------- 868 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 868 (1117)
..|+||||+++|+|.++++....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999988764210
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc
Q 001238 869 ------------------------------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG 912 (1117)
Q Consensus 869 ------------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~ 912 (1117)
...+++.++.+++.|+++||+|||+. +|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 12377888899999999999999999 999999999999999
Q ss_pred CCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChh
Q 001238 913 ERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQH 991 (1117)
Q Consensus 913 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~ 991 (1117)
+++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.....+ ..
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~-~~ 348 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSN--YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD-ST 348 (400)
T ss_pred CCCEEEEEeCCcceecccccc--ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh-HH
Confidence 999999999999987643221 122233457788999999988899999999999999999997 99998643211 11
Q ss_pred HHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 992 VIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
.. ........ +..+...+..+.+++ ..||+.+|++||++.+|.++|+++.+
T Consensus 349 ~~----~~~~~~~~------~~~~~~~~~~l~~li------~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 349 FY----NKIKSGYR------MAKPDHATQEVYDIM------VKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HH----HHHhcCCC------CCCCccCCHHHHHHH------HHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11 11121111 111222233444444 45999999999999999999987643
No 76
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=9.8e-35 Score=337.65 Aligned_cols=203 Identities=23% Similarity=0.279 Sum_probs=172.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||+||++.. .+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999999874 578999999986532 223456888999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999998754 3488999999999999999999999 9999999999999999999999999999643221
Q ss_pred CCCc----------c---------------------------------ccCCccccccccCChhhhccCCCCcCCCeeeh
Q 001238 932 SGGS----------F---------------------------------SANPQFAGSYGYIAPEYANMTKISEKSDVYSY 968 (1117)
Q Consensus 932 ~~~~----------~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~Sl 968 (1117)
.... . ......+||+.|+|||++....++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 0000 0 00012469999999999998999999999999
Q ss_pred hhhHHHHHhCCCCCCC
Q 001238 969 GVVLLEIITGKKPVDA 984 (1117)
Q Consensus 969 G~vl~ell~g~~P~~~ 984 (1117)
||++|||++|+.||..
T Consensus 235 Gvil~elltG~~Pf~~ 250 (377)
T cd05629 235 GAIMFECLIGWPPFCS 250 (377)
T ss_pred chhhhhhhcCCCCCCC
Confidence 9999999999999964
No 77
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.6e-35 Score=333.10 Aligned_cols=244 Identities=22% Similarity=0.325 Sum_probs=192.1
Q ss_pred CCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHH---hccCCCCcceEEeeeecCCceEEE
Q 001238 778 LTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATL---SRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
|++.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++ ++++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56788999999999999975 468999999997532 22345566776655 566899999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++|+|..+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999888653 389999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||... ...+..........
T Consensus 154 ~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~-----~~~~~~~~i~~~~~------ 218 (324)
T cd05589 154 FG----DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD-----DEEEVFDSIVNDEV------ 218 (324)
T ss_pred CC----CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCC------
Confidence 11 1223567999999999999999999999999999999999999999642 11222222222221
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCC-----HHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPT-----MKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs-----~~~v~~ 1051 (1117)
..+...+..+.++++. |++.||++||+ +.++++
T Consensus 219 --~~p~~~~~~~~~li~~------~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 --RYPRFLSREAISIMRR------LLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred --CCCCCCCHHHHHHHHH------HhhcCHhHcCCCCCCCHHHHhh
Confidence 1222334445555554 99999999994 555544
No 78
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.3e-35 Score=330.04 Aligned_cols=200 Identities=23% Similarity=0.353 Sum_probs=172.8
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
++|++.+.||+|+||+||+|+.+ +++.||+|+++... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36889999999999999999864 58899999987542 2234568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|++++.+..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 99998777654432 3488999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 155 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~ 203 (287)
T cd07848 155 N---ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPG 203 (287)
T ss_pred c---ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCC
Confidence 1 122345789999999999988899999999999999999999999975
No 79
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.6e-35 Score=329.42 Aligned_cols=201 Identities=28% Similarity=0.351 Sum_probs=170.4
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
.++|++.+.||+|+||+||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 457999999999999999999864 688999999875432 223467889999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|++ +++.+++.... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 995 57777766432 3488899999999999999999999 99999999999999999999999999997543221
Q ss_pred CCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 158 ----HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred ----ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 12234568999999998864 56889999999999999999999999753
No 80
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.1e-35 Score=330.59 Aligned_cols=260 Identities=23% Similarity=0.347 Sum_probs=201.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCc----EEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGL----TVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
.+|++.+.||+|+||+||+|.+. +++ .||+|+++... ....+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46899999999999999999753 333 48999987542 23456788999999999999999999988764 5789
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
|+||+++|+|.+++.... ..+++..+++++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence 999999999999998653 3488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
..... .......++..|+|||++....++.++|||||||++|||++ |+.||.+.. ..+. ...........
T Consensus 161 ~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~-----~~~~-~~~~~~~~~~~- 231 (316)
T cd05108 161 ADEKE--YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEI-SSILEKGERLP- 231 (316)
T ss_pred CCCcc--eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHH-HHHHhCCCCCC-
Confidence 43211 11122334678999999999999999999999999999998 999986421 1111 12222111110
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEPA 1061 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~ 1061 (1117)
.+...+..+.. ++..||+.+|++||++.++++.+.++.+.+.
T Consensus 232 -----~~~~~~~~~~~------li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 232 -----QPPICTIDVYM------IMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred -----CCCCCCHHHHH------HHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 01122223333 4455999999999999999999988876543
No 81
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.6e-35 Score=338.35 Aligned_cols=255 Identities=24% Similarity=0.287 Sum_probs=201.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999864 68999999997532 233457889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++++|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999765 3489999999999999999999998 9999999999999999999999999999876543
Q ss_pred CC-------------------------CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCC
Q 001238 932 SG-------------------------GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASF 986 (1117)
Q Consensus 932 ~~-------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~ 986 (1117)
.. ..........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 20 00112234579999999999999999999999999999999999999996532
Q ss_pred CCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCC-HHHHHHH
Q 001238 987 PDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPT-MKDVAAL 1052 (1117)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs-~~~v~~~ 1052 (1117)
................ .+.. ...+..+.+++.. |+. +|.+||+ +.++++.
T Consensus 235 -----~~~~~~~i~~~~~~~~---~p~~-~~~~~~~~~li~~------ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 -----LQETYNKIINWKESLR---FPPD-PPVSPEAIDLICR------LLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred -----HHHHHHHHhccCCccc---CCCC-CCCCHHHHHHHHH------Hcc-ChhhcCCCHHHHhcC
Confidence 1222222222111100 0111 1124455555554 887 9999999 9999873
No 82
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.1e-35 Score=333.70 Aligned_cols=241 Identities=21% Similarity=0.274 Sum_probs=193.4
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNG 857 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 857 (1117)
+.||+|+||.||++.. .+|+.||+|+++... ......+..|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999974 568999999997532 223456778999999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 858 TLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHH-DCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 858 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
+|.+++... +.+++.++..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---- 150 (325)
T cd05594 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---- 150 (325)
T ss_pred cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC----
Confidence 999888654 248999999999999999999997 6 99999999999999999999999999987543221
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ ..++.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~~~~~~~i~~~~--------~~~p~ 217 (325)
T cd05594 151 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEE--------IRFPR 217 (325)
T ss_pred cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC-----HHHHHHHHhcCC--------CCCCC
Confidence 12234579999999999998999999999999999999999999996421 112222221111 11223
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
..+..+.++++. |++.||++|+ ++.++++
T Consensus 218 ~~~~~~~~li~~------~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 218 TLSPEAKSLLSG------LLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCHHHHHHHHH------HhhcCHHHhCCCCCCCHHHHhc
Confidence 344455666655 9999999996 8888875
No 83
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.4e-35 Score=339.34 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=196.8
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999854 68999999997532 223456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||+++.....
T Consensus 81 E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKK---DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 999999999998764 3489999999999999999999999 9999999999999999999999999998765322
Q ss_pred CCCcc----------------------------------ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh
Q 001238 932 SGGSF----------------------------------SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT 977 (1117)
Q Consensus 932 ~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~ 977 (1117)
..... ......+||+.|+|||++....++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 11000 00112469999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCC---HHHHHH
Q 001238 978 GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPT---MKDVAA 1051 (1117)
Q Consensus 978 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs---~~~v~~ 1051 (1117)
|+.||.... ..+............. . +. ....+....++++. |+. +|.+|++ +.++++
T Consensus 235 G~~Pf~~~~-----~~~~~~~i~~~~~~~~--~-~~-~~~~s~~~~~li~~------ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 235 GYPPFCSDN-----PQETYRKIINWKETLQ--F-PD-EVPLSPEAKDLIKR------LCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCC-----HHHHHHHHHcCCCccC--C-CC-CCCCCHHHHHHHHH------Hcc-CHhhcCCCCCHHHHhc
Confidence 999996421 1222222222111110 0 11 01223345555554 665 8999997 888866
No 84
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.1e-35 Score=325.62 Aligned_cols=261 Identities=24% Similarity=0.384 Sum_probs=206.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
++|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 4688899999999999999873 2356799999876555556679999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCccee
Q 001238 850 FYDYMPNGTLGMLLHDGE----------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCL 919 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 919 (1117)
||||+++++|.+++.... ....+++.+++.++.|++.||+|||++ +++||||||+||++++++.++|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 999999999999986432 123489999999999999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHH
Q 001238 920 ADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRD 998 (1117)
Q Consensus 920 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~ 998 (1117)
+|||+++....... ........++..|+|||++....++.++|||||||++|||++ |+.||..... ......
T Consensus 162 ~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-----~~~~~~ 234 (288)
T cd05093 162 GDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEVIEC 234 (288)
T ss_pred ccCCccccccCCce--eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHH
Confidence 99999986543211 112223446788999999998899999999999999999998 9999864321 112222
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
..... . +......+..+.++ +..|++.+|.+||++.++.+.|+.+.+.
T Consensus 235 i~~~~-~------~~~~~~~~~~l~~l------i~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ITQGR-V------LQRPRTCPKEVYDL------MLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHcCC-c------CCCCCCCCHHHHHH------HHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 22111 1 01112233344444 4459999999999999999999988754
No 85
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.9e-35 Score=325.47 Aligned_cols=257 Identities=26% Similarity=0.444 Sum_probs=203.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC------CcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS------GLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 848 (1117)
++|++.+.||+|+||.||+|.... ...||+|.++.... ...++|.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 368889999999999999997532 25799999875432 23456899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC
Q 001238 849 LFYDYMPNGTLGMLLHDGEC-------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY 915 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~ 915 (1117)
++|||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999875321 13478899999999999999999999 999999999999999999
Q ss_pred cceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHH
Q 001238 916 ESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQ 994 (1117)
Q Consensus 916 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~ 994 (1117)
.++|+|||+++....... ........+++.|+|||.+....++.++|||||||++|||++ |..||.+... .....
T Consensus 162 ~~~L~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--~~~~~ 237 (283)
T cd05048 162 TVKISDFGLSRDIYSADY--YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--QEVIE 237 (283)
T ss_pred cEEECCCcceeecccccc--ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Confidence 999999999986543211 112234456889999999988899999999999999999998 9999965321 22222
Q ss_pred HHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 995 WVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
.+ ..... +..+...+..+.+++.. ||+.+|++||++++|.+.|+.
T Consensus 238 ~i----~~~~~------~~~~~~~~~~~~~l~~~------c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 238 MI----RSRQL------LPCPEDCPARVYALMIE------CWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH----HcCCc------CCCcccCCHHHHHHHHH------HccCChhhCcCHHHHHHHHhc
Confidence 21 11111 11223334455555554 999999999999999999875
No 86
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.2e-35 Score=333.63 Aligned_cols=238 Identities=26% Similarity=0.320 Sum_probs=191.7
Q ss_pred CeeeecCCeEEEEEEc----CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 782 NIIGQGRSGIVYKVTL----PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
+.||+|+||.||+++. .+|+.||+|+++... ......+..|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999864 368899999997532 1233457789999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|+|.+++... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--- 152 (318)
T cd05582 82 GGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--- 152 (318)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC---
Confidence 99999988654 3489999999999999999999999 99999999999999999999999999998654321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......||+.|+|||++....++.++|||||||++|||++|+.||... .............. .++
T Consensus 153 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~-----~~~~~~~~i~~~~~--------~~p 218 (318)
T cd05582 153 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK-----DRKETMTMILKAKL--------GMP 218 (318)
T ss_pred -CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC-----CHHHHHHHHHcCCC--------CCC
Confidence 1223457899999999999888999999999999999999999999642 11222222222211 122
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKD 1048 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~ 1048 (1117)
...+..+..+++. |++.||++||++.+
T Consensus 219 ~~~~~~~~~li~~------~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 QFLSPEAQSLLRA------LFKRNPANRLGAGP 245 (318)
T ss_pred CCCCHHHHHHHHH------HhhcCHhHcCCCCC
Confidence 3334455666655 99999999999655
No 87
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.8e-35 Score=349.99 Aligned_cols=252 Identities=22% Similarity=0.283 Sum_probs=201.3
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-C-CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-S-GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.|.+.+.||+|+||.||+|... + ++.||+|.+...+......+.+|+++++.++|||||++++++...+..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4788899999999999999643 3 6789999876555544556888999999999999999999999999999999999
Q ss_pred CCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 855 PNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 855 ~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
++|+|.++++.. .....+++.++..++.|++.||+|+|++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999887643 2234588999999999999999999999 999999999999999999999999999987653211
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.......+||++|+|||++....++.++|||||||++|||++|+.||... ...+.+......... .
T Consensus 225 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~-----~~~~~~~~~~~~~~~-------~ 290 (478)
T PTZ00267 225 --LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP-----SQREIMQQVLYGKYD-------P 290 (478)
T ss_pred --cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC-------C
Confidence 12234567999999999999999999999999999999999999999642 122233333222211 1
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+...+..+.+++.. |++.+|++||++.+++.
T Consensus 291 ~~~~~s~~~~~li~~------~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 FPCPVSSGMKALLDP------LLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCccCCHHHHHHHHH------HhccChhhCcCHHHHHh
Confidence 122233345555554 99999999999999864
No 88
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.1e-34 Score=325.16 Aligned_cols=199 Identities=27% Similarity=0.342 Sum_probs=166.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-C-CCcEEEEEEeecCC--ccchHHHHHHHHHHhcc---CCCCcceEEeeee-----c
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-P-SGLTVAVKRFRASD--KISTGAFSSEIATLSRI---RHRNIVRLLGWGA-----N 843 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~-----~ 843 (1117)
++|++.+.||+|+||+||+|+. . +++.||+|+++... ......+.+|+++++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688999999999999999975 2 46889999987542 22234566788877766 6999999999875 2
Q ss_pred CCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 844 RKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 844 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
....++||||++ ++|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 456799999996 688888875432 3388999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+++..... .......||+.|+|||++....++.++|||||||++|||++|++||.+
T Consensus 156 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 211 (290)
T cd07862 156 LARIYSFQ-----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 211 (290)
T ss_pred ceEeccCC-----cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence 99865432 123345789999999999888999999999999999999999999975
No 89
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.8e-35 Score=325.47 Aligned_cols=261 Identities=24% Similarity=0.410 Sum_probs=206.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
++|.+.+.||+|+||.||+|+. .++..||+|.++.......+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 3577889999999999999864 2356799999876655555679999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc
Q 001238 850 FYDYMPNGTLGMLLHDGE-------------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE 916 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~ 916 (1117)
||||+++++|.+++.... ..+.+++..+++++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999986532 123488999999999999999999999 9999999999999999999
Q ss_pred ceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHH
Q 001238 917 SCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQW 995 (1117)
Q Consensus 917 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~ 995 (1117)
++|+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++ |+.||..... ....+
T Consensus 162 ~~l~dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~- 236 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--TEVIE- 236 (291)
T ss_pred EEECCCCcccccCCCce--eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHH-
Confidence 99999999976543211 112233456789999999998999999999999999999999 9999864211 11221
Q ss_pred HHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 996 VRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
.. .... .. ......+..+.+++. .|++.+|++||++.+|+++|+++.+.
T Consensus 237 --~~-~~~~-~~-----~~~~~~~~~~~~li~------~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 237 --CI-TQGR-VL-----ERPRVCPKEVYDIML------GCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred --HH-hCCC-CC-----CCCccCCHHHHHHHH------HHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11 1111 10 111222334444444 49999999999999999999998653
No 90
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.9e-35 Score=321.82 Aligned_cols=256 Identities=29% Similarity=0.464 Sum_probs=207.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
..+|++.++||+|+||.||+|...+++.||+|++..........+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 34688899999999999999998789999999998766555678999999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++.... ...+++.++.+++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+.......
T Consensus 85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 85 EKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred ccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 9999999998753 23489999999999999999999999 99999999999999999999999999998764321
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.......++..|+|||.+....++.++||||||+++|+|++ |+.||.... ...... ...... . +.
T Consensus 159 --~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~~~~~~---~~~~~~-~------~~ 224 (261)
T cd05148 159 --YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--NHEVYD---QITAGY-R------MP 224 (261)
T ss_pred --ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--HHHHHH---HHHhCC-c------CC
Confidence 11123346778999999988899999999999999999998 899996421 112222 221111 1 11
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
.+...+..+.++ +..|++.+|++||+++++++.|+.+
T Consensus 225 ~~~~~~~~~~~~------i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 225 CPAKCPQEIYKI------MLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCCCHHHHHH------HHHHcCCCchhCcCHHHHHHHHhcC
Confidence 122223344444 4459999999999999999999753
No 91
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3e-35 Score=323.30 Aligned_cols=250 Identities=31% Similarity=0.513 Sum_probs=192.7
Q ss_pred CCCeeeecCCeEEEEEEcC-----CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 780 AGNIIGQGRSGIVYKVTLP-----SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 780 ~~~~lg~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+.+.||.|.||.||+|.+. .+..|+||+++.... ...+.|.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3468999999999999865 357899999965432 2367899999999999999999999999988889999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++|+|.+++.... ...+++.++.+|+.|+++||+|||++ +|+||||+++||++++++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~-- 156 (259)
T PF07714_consen 83 CPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK-- 156 (259)
T ss_dssp -TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS--
T ss_pred cccccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc--
Confidence 99999999998862 23489999999999999999999999 9999999999999999999999999999876321
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
..............|+|||.+....++.++||||||+++|||++ |+.||... ...+..... ..... .
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~-~~~~~------~ 224 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKL-KQGQR------L 224 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHH-HTTEE------T
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccc-ccccc------c
Confidence 11123334457789999999999899999999999999999999 78998542 222222222 21111 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
..+...+..+.+++.. ||+.+|++||+++++++.|
T Consensus 225 ~~~~~~~~~~~~li~~------C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 PIPDNCPKDIYSLIQQ------CWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBTTSBHHHHHHHHH------HT-SSGGGS--HHHHHHHH
T ss_pred eeccchhHHHHHHHHH------HcCCChhhCcCHHHHHhcC
Confidence 1223344556666665 9999999999999999875
No 92
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=328.94 Aligned_cols=244 Identities=27% Similarity=0.439 Sum_probs=197.0
Q ss_pred eeeecCCeEEEEEEcCC-CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCChhh
Q 001238 783 IIGQGRSGIVYKVTLPS-GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLGM 861 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 861 (1117)
+||+|.||+||.|+..+ ...+|||.+...+....+-+..|+..-+.++|.|||+++|.+.+.++.-+.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 59999999999998654 56799999987666666778999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc-CCCcceeccccccccccCCCCCcccc
Q 001238 862 LLHDGECAGLL--EWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG-ERYESCLADFGLARLVEDDSGGSFSA 938 (1117)
Q Consensus 862 ~l~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~ 938 (1117)
+++..- |++ .+.+.-.+..||++||.|||++ .|||||||-+|||+. -.|.+||+|||.++.+..- ...
T Consensus 662 LLrskW--GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi----nP~ 732 (1226)
T KOG4279|consen 662 LLRSKW--GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI----NPC 732 (1226)
T ss_pred HHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC----Ccc
Confidence 998753 335 6778888999999999999999 999999999999996 4689999999999987532 234
Q ss_pred CCccccccccCChhhhccC--CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 939 NPQFAGSYGYIAPEYANMT--KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 939 ~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
..++.||..|||||++..+ .|+.++|||||||++.||.||++||-..-.. . ..+++- ..-...|.++.
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp--q-AAMFkV-------GmyKvHP~iPe 802 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP--Q-AAMFKV-------GMYKVHPPIPE 802 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh--h-Hhhhhh-------cceecCCCCcH
Confidence 5678999999999999764 5889999999999999999999999643111 1 111111 11122344444
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
......+. +++.|..+||.+||+++++++
T Consensus 803 elsaeak~------FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 803 ELSAEAKN------FILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHH------HHHHHcCCCcccCccHHHhcc
Confidence 43333333 555699999999999999987
No 93
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.2e-34 Score=329.81 Aligned_cols=242 Identities=20% Similarity=0.305 Sum_probs=189.7
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecC---CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS---DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|.. .+++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999985 46889999999754 222345577899888777 799999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|..++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---- 150 (329)
T cd05618 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---- 150 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC----
Confidence 9999888654 3489999999999999999999999 99999999999999999999999999997543211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCC---ChhHHHHHHHHHhcCCCCccccCcc
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPD---GQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......++........ ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~~ 223 (329)
T cd05618 151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------IR 223 (329)
T ss_pred CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-------CC
Confidence 1223467999999999999999999999999999999999999999632111 1122222322222211 12
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTM 1046 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~ 1046 (1117)
++...+.....+++. |++.||++||++
T Consensus 224 ~p~~~~~~~~~ll~~------~L~~dP~~R~~~ 250 (329)
T cd05618 224 IPRSLSVKAASVLKS------FLNKDPKERLGC 250 (329)
T ss_pred CCCCCCHHHHHHHHH------HhcCCHHHcCCC
Confidence 233334445555554 999999999984
No 94
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.9e-35 Score=324.46 Aligned_cols=256 Identities=25% Similarity=0.408 Sum_probs=202.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 848 (1117)
++|.+.+.||+|+||.||+|... +++.||||+++..... ..+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 46888899999999999999753 3478999998765433 3568999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcc
Q 001238 849 LFYDYMPNGTLGMLLHDGE-----------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYES 917 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~ 917 (1117)
+||||+++++|.+++.... ....+++.++..++.|++.|++|||++ +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999987532 123478899999999999999999999 99999999999999999999
Q ss_pred eeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHH
Q 001238 918 CLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 918 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~ 996 (1117)
+|+|||+++....... ........+++.|+|||++....++.++|||||||++|||++ |+.||.... ......
T Consensus 162 kl~d~g~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--~~~~~~-- 235 (280)
T cd05049 162 KIGDFGMSRDVYTTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--NEEVIE-- 235 (280)
T ss_pred EECCcccceecccCcc--eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHH--
Confidence 9999999976533211 112223356789999999999999999999999999999998 999986421 122222
Q ss_pred HHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 997 RDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
...... . +......+..+.++++. ||+.+|++||++.||++.|+
T Consensus 236 -~~~~~~--~-----~~~~~~~~~~~~~li~~------~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 236 -CITQGR--L-----LQRPRTCPSEVYDIMLG------CWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -HHHcCC--c-----CCCCCCCCHHHHHHHHH------HcCCCcccCCCHHHHHHHhh
Confidence 211111 1 11112333455555555 99999999999999999885
No 95
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=326.78 Aligned_cols=256 Identities=28% Similarity=0.457 Sum_probs=207.9
Q ss_pred CCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
+++..++||-|-||.||.|.|+. .-.||||.++. +....++|..|+.+|+.++|||+|+++|+|..+..+|+|.|||.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 35567899999999999999865 56899999874 55678899999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
.|+|.+|+++.... .++.-..+.+|.||++|++||..+ .+||||+.++|+||+++..+|++|||+++....+ .
T Consensus 347 yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD---T 419 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD---T 419 (1157)
T ss_pred CccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCC---c
Confidence 99999999986543 367778889999999999999999 9999999999999999999999999999987643 2
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
+.+.....-.+.|.|||-+....++.|+|||+|||++||+.| |..||.+. +-..++..+.+.++-+ .-
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi--dlSqVY~LLEkgyRM~---------~P 488 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYGLLEKGYRMD---------GP 488 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc--cHHHHHHHHhcccccc---------CC
Confidence 233333334578999999999999999999999999999999 99998642 1112233332222111 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
.+++ ..+.++++. ||+..|.+||+++|+.+.++.+..
T Consensus 489 eGCP-pkVYeLMra------CW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 489 EGCP-PKVYELMRA------CWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred CCCC-HHHHHHHHH------HhcCCcccCccHHHHHHHHHHHhc
Confidence 3344 345555554 999999999999999999987653
No 96
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=9.9e-35 Score=328.82 Aligned_cols=240 Identities=22% Similarity=0.344 Sum_probs=189.3
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|+. .+++.||+|+++... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999985 458899999997532 22334556677777654 899999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|..++... +.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---- 150 (316)
T cd05592 81 GDLMFHIQSS---GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---- 150 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC----
Confidence 9999988754 3488999999999999999999999 99999999999999999999999999998653221
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+......... +.++.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~--------~~~~~ 217 (316)
T cd05592 151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED-----EDELFDSILNDR--------PHFPR 217 (316)
T ss_pred CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCC--------CCCCC
Confidence 22334579999999999998899999999999999999999999996421 122222222111 22233
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHH-HHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMK-DVA 1050 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~-~v~ 1050 (1117)
..+....++++. |++.+|++||++. ++.
T Consensus 218 ~~~~~~~~ll~~------~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 218 WISKEAKDCLSK------LFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCHHHHHHHHH------HccCCHHHcCCChHHHH
Confidence 344455555555 9999999999875 443
No 97
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=9.3e-35 Score=330.14 Aligned_cols=241 Identities=20% Similarity=0.289 Sum_probs=191.4
Q ss_pred CeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||.||+|+.. +++.||+|+++.. .....+.+..|.++++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999754 5789999998753 222344577888988866 799999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|..++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~---- 150 (321)
T cd05591 81 GDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG---- 150 (321)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC----
Confidence 9999888654 2488999999999999999999999 99999999999999999999999999997643221
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++....++.++||||+||++|||++|+.||.... ............. ..+.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-----~~~~~~~i~~~~~--------~~p~ 217 (321)
T cd05591 151 VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN-----EDDLFESILHDDV--------LYPV 217 (321)
T ss_pred ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCC--------CCCC
Confidence 12334579999999999998999999999999999999999999996421 1222222222221 1122
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCC-------CHHHHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRP-------TMKDVAA 1051 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RP-------s~~~v~~ 1051 (1117)
..+....++++. |++.||++|| ++.++.+
T Consensus 218 ~~~~~~~~ll~~------~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 218 WLSKEAVSILKA------FMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCHHHHHHHHH------HhccCHHHcCCCCCCCCCHHHHhc
Confidence 233445555554 9999999999 6677654
No 98
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.3e-34 Score=329.72 Aligned_cols=247 Identities=19% Similarity=0.295 Sum_probs=193.4
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999975 468899999997542 22345678899999998 799999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---- 150 (329)
T cd05588 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---- 150 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC----
Confidence 9999888654 3489999999999999999999999 99999999999999999999999999987532211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCC---ChhHHHHHHHHHhcCCCCccccCcc
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPD---GQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||+..... ......+..+...... ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 223 (329)
T cd05588 151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-------IR 223 (329)
T ss_pred CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-------CC
Confidence 1223457999999999999999999999999999999999999999642111 1112223333222221 11
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCC------HHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPT------MKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs------~~~v~~ 1051 (1117)
++...+.....+++. |++.||.+||+ +.++++
T Consensus 224 ~p~~~~~~~~~li~~------~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 224 IPRSLSVKASSVLKG------FLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CCCCCCHHHHHHHHH------HhccCHHHcCCCCCCCCHHHHhc
Confidence 233334445555555 99999999997 556643
No 99
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.5e-34 Score=318.92 Aligned_cols=254 Identities=27% Similarity=0.411 Sum_probs=202.5
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
+|.+.+.||+|+||.||+|... .++.||+|++... ....+++.+|++++++++||||+++++++...+..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4777889999999999998754 5889999998754 3345678999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.+++..... ..+++..++.++.|+++||+|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 86 ~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~--- 158 (263)
T cd05052 86 YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--- 158 (263)
T ss_pred CCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccce---
Confidence 9999999876432 3489999999999999999999999 99999999999999999999999999998764321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
........++..|+|||.+.+..++.++|||||||++|||++ |..||... ...+...... ... .+..
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~-----~~~~~~~~~~-~~~------~~~~ 226 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYELLE-KGY------RMER 226 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHH-CCC------CCCC
Confidence 111122334678999999998999999999999999999998 99998642 1122222211 110 1112
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
+...+..+.+++.. |++.+|++||++.+++++|+.+
T Consensus 227 ~~~~~~~~~~li~~------cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 227 PEGCPPKVYELMRA------CWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCHHHHHHHHH------HccCCcccCCCHHHHHHHHHhh
Confidence 22333455555554 9999999999999999999865
No 100
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.9e-35 Score=333.90 Aligned_cols=261 Identities=29% Similarity=0.418 Sum_probs=200.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecC-Cc
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANR-KT 846 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~~ 846 (1117)
++|++.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 4689999999999999999853 235789999987542 22235677899999999 899999999987654 56
Q ss_pred eEEEEEecCCCChhhhhcCCCC----------------------------------------------------------
Q 001238 847 KLLFYDYMPNGTLGMLLHDGEC---------------------------------------------------------- 868 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 868 (1117)
.+++|||+++++|.+++.....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 7899999999999998864221
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCcccccccc
Q 001238 869 AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGY 948 (1117)
Q Consensus 869 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y 948 (1117)
...+++..+.+++.||++||+|||+. +|+||||||+||++++++.++|+|||+++.+..... ........++..|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~--~~~~~~~~~~~~y 241 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKGDARLPLKW 241 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcc--hhhccCCCCCccc
Confidence 12478999999999999999999999 999999999999999999999999999987643211 1122334567789
Q ss_pred CChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHH
Q 001238 949 IAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQ 1027 (1117)
Q Consensus 949 ~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 1027 (1117)
+|||++.+..++.++|||||||++|||++ |+.||...... +.... ....... +..+......+.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-~~~~~----~~~~~~~------~~~~~~~~~~~~---- 306 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-EEFCR----RLKEGTR------MRAPEYATPEIY---- 306 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-HHHHH----HHhccCC------CCCCccCCHHHH----
Confidence 99999999999999999999999999998 99999653221 11111 1111111 011111222233
Q ss_pred HHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1028 ALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1028 ~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
.++..|++.+|++||++.++++.|+++.+
T Consensus 307 --~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 307 --SIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred --HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 35556999999999999999999998765
No 101
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-34 Score=329.33 Aligned_cols=237 Identities=24% Similarity=0.315 Sum_probs=187.1
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHH-HHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIA-TLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|.. .+|+.||+|++.... ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999985 468999999987532 222334445544 56789999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++... +.+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---- 150 (323)
T cd05575 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS---- 150 (323)
T ss_pred CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC----
Confidence 9999988764 3488999999999999999999999 99999999999999999999999999987543211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.......... .+..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~--------~~~~ 217 (323)
T cd05575 151 KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DTAEMYDNILNKPL--------RLKP 217 (323)
T ss_pred CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcCCC--------CCCC
Confidence 1233457999999999999999999999999999999999999999642 22233333322211 1122
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMK 1047 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~ 1047 (1117)
..+....++++. |++.||.+||++.
T Consensus 218 ~~~~~~~~li~~------~l~~~p~~R~~~~ 242 (323)
T cd05575 218 NISVSARHLLEG------LLQKDRTKRLGAK 242 (323)
T ss_pred CCCHHHHHHHHH------HhhcCHHhCCCCC
Confidence 234455555555 9999999999875
No 102
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.4e-35 Score=331.80 Aligned_cols=198 Identities=29% Similarity=0.444 Sum_probs=173.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
++|++.++||+|+||.||++.+. ++..||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 57999999999999999999864 68899999887542 22345789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++|+|.+++... +.+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 85 MDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred CCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 9999999998764 34788999999999999999999742 7999999999999999999999999999765432
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12334689999999999988999999999999999999999999964
No 103
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.4e-35 Score=330.04 Aligned_cols=237 Identities=22% Similarity=0.299 Sum_probs=189.5
Q ss_pred CeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|+.+ +++.||||+++.. .....+.+..|.+++..+ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999854 5889999998753 223345677888888876 699999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---- 150 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---- 150 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC----
Confidence 99999887542 488999999999999999999999 99999999999999999999999999987543211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||... .............. ..+.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~-----~~~~~~~~i~~~~~--------~~~~ 217 (320)
T cd05590 151 KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE-----NEDDLFEAILNDEV--------VYPT 217 (320)
T ss_pred CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHhcCCC--------CCCC
Confidence 1233457999999999999899999999999999999999999999642 12222333222211 1222
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMK 1047 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~ 1047 (1117)
..+....++++. |++.||++||++.
T Consensus 218 ~~~~~~~~li~~------~L~~dP~~R~~~~ 242 (320)
T cd05590 218 WLSQDAVDILKA------FMTKNPTMRLGSL 242 (320)
T ss_pred CCCHHHHHHHHH------HcccCHHHCCCCC
Confidence 334455555555 9999999999983
No 104
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.1e-34 Score=318.44 Aligned_cols=252 Identities=24% Similarity=0.408 Sum_probs=200.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|++.+.||+|+||+||+|++.++..||+|.++... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3578889999999999999988777789999987543 345679999999999999999999999999899999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|+|.+++.... ..+++.++++++.|++.||+|||+. +++|+||||+||++++++.+||+|||.++......
T Consensus 83 ~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~--- 154 (256)
T cd05113 83 NGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE--- 154 (256)
T ss_pred CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc---
Confidence 999999987643 2489999999999999999999999 99999999999999999999999999998664321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
........++..|+|||......++.++||||||+++|||++ |+.||.... .... .......... ..
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~---~~~~~~~~~~-------~~ 222 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--NSET---VEKVSQGLRL-------YR 222 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHHH---HHHHhcCCCC-------CC
Confidence 111222345678999999988889999999999999999998 999986421 1111 1222111111 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
+...+..+.+++. .||+.+|++||++.++++.++
T Consensus 223 ~~~~~~~~~~li~------~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 PHLASEKVYAIMY------SCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCHHHHHHHH------HHcCCCcccCCCHHHHHHhhC
Confidence 1122334444444 499999999999999998763
No 105
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9e-35 Score=331.88 Aligned_cols=252 Identities=21% Similarity=0.286 Sum_probs=198.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|.+.+.||+|+||+||+|+. .+|+.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688899999999999999975 468999999997532 223456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++.... +.+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999997652 3489999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCCccccCCccccccccCChhhhc------cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYAN------MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKD 1005 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1117)
.. .......||+.|+|||++. ...++.++|||||||++|||++|+.||.... .............
T Consensus 156 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~~~- 226 (330)
T cd05601 156 KM---VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT-----SAKTYNNIMNFQR- 226 (330)
T ss_pred Cc---eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC-----HHHHHHHHHcCCC-
Confidence 21 1223347899999999986 4567899999999999999999999996421 1222222222211
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.... +. ....+..+.++++. |++ +|++||++.++++
T Consensus 227 ~~~~--~~-~~~~~~~~~~li~~------ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 227 FLKF--PE-DPKVSSDFLDLIQS------LLC-GQKERLGYEGLCC 262 (330)
T ss_pred ccCC--CC-CCCCCHHHHHHHHH------Hcc-ChhhCCCHHHHhC
Confidence 1100 11 11223345555554 887 9999999999875
No 106
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.5e-34 Score=318.62 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=202.8
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.++|++.+.||+|+||.||+|...+++.||+|.++... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 35688899999999999999987778899999987543 34567899999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.......
T Consensus 84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 9999999997653 23489999999999999999999999 999999999999999999999999999987653211
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
........+..|+|||+.....++.++||||||+++|||++ |+.||.+.. ..... . ........ .
T Consensus 159 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~---~-~~~~~~~~------~ 224 (261)
T cd05068 159 --EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--NAEVL---Q-QVDQGYRM------P 224 (261)
T ss_pred --cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHH---H-HHHcCCCC------C
Confidence 11112233468999999988899999999999999999999 999996421 11111 1 11111111 0
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
.....+..+.+ ++..|++.+|++||++.++.+.|++
T Consensus 225 ~~~~~~~~~~~------li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 225 CPPGCPKELYD------IMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCcCCHHHHH------HHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11122233444 4445999999999999999999975
No 107
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.4e-34 Score=319.98 Aligned_cols=260 Identities=20% Similarity=0.344 Sum_probs=205.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||.||+|.. .+++.||||+++... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688999999999999999985 468999999876432 223456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 852 DYMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
||+++|+|.+++.... ....+++..+..++.|+++||+|||++ +++||||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998886422 123478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.. .......+++.|+|||.+.+..++.++||||||+++|||++|+.||.... .....+... +.....+
T Consensus 159 ~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~---~~~~~~~~~-~~~~~~~---- 226 (267)
T cd08228 159 KT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLFSLCQK-IEQCDYP---- 226 (267)
T ss_pred hh----HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc---ccHHHHHHH-HhcCCCC----
Confidence 21 11223468889999999988889999999999999999999999985422 122222222 1111111
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
+......+..+.+++.. ||+.+|++||++.+|++.+++++
T Consensus 227 -~~~~~~~~~~~~~li~~------cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 227 -PLPTEHYSEKLRELVSM------CIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -CCChhhcCHHHHHHHHH------HCCCCcccCcCHHHHHHHHHHhc
Confidence 11112233445555554 99999999999999999998764
No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.2e-34 Score=323.63 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=198.1
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
+|++.++||+|+||+||++.. .+++.||+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 477889999999999999975 468999999987532 1223457789999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 999999998886542 23489999999999999999999999 99999999999999999999999999998654321
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
......|++.|+|||++....++.++||||+||++|||++|+.||.... .....+.+...+.... .
T Consensus 157 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~-------~ 222 (285)
T cd05605 157 -----TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK--EKVKREEVERRVKEDQ-------E 222 (285)
T ss_pred -----ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc--hhhHHHHHHHHhhhcc-------c
Confidence 1223478999999999998899999999999999999999999997532 1111122222222111 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
.++...+..+.+++.. |++.||++|| ++.++.+
T Consensus 223 ~~~~~~~~~~~~li~~------~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 223 EYSEKFSEAARSICRQ------LLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ccCcccCHHHHHHHHH------HccCCHHHhcCCCCCCHHHHhc
Confidence 1222334455555555 9999999999 7778755
No 109
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.6e-34 Score=328.25 Aligned_cols=237 Identities=25% Similarity=0.305 Sum_probs=184.8
Q ss_pred CeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHH-HHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIA-TLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
++||+|+||.||+|+.. +++.||+|++.... ......+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999864 68899999987532 122334555554 57889999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|...+... ..+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---- 150 (321)
T cd05603 81 GELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE---- 150 (321)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC----
Confidence 9998888653 3378889999999999999999999 99999999999999999999999999987542211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++....++.++|||||||++|||++|+.||... ............. ..++.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~--------~~~~~ 217 (321)
T cd05603 151 ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DVSQMYDNILHKP--------LQLPG 217 (321)
T ss_pred CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-----CHHHHHHHHhcCC--------CCCCC
Confidence 1233457899999999999889999999999999999999999999642 2222222222211 11222
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMK 1047 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~ 1047 (1117)
.....+.+++. .|++.+|.+||++.
T Consensus 218 ~~~~~~~~li~------~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLV------GLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHH------HHccCCHhhcCCCC
Confidence 23334444444 49999999999754
No 110
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.7e-35 Score=334.88 Aligned_cols=248 Identities=23% Similarity=0.374 Sum_probs=191.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
.+|+..++||+|+||+||+|.. .+|+.||||++..... .....+.+|++++++++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 3567778999999999999975 4689999999865432 2345788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++|+|.... ...+..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 9999986532 256778889999999999999999 99999999999999999999999999998764321
Q ss_pred CccccCCccccccccCChhhhcc-----CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-----TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||..... ..............
T Consensus 223 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~----- 292 (353)
T PLN00034 223 ---DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCAICMSQ----- 292 (353)
T ss_pred ---ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhccC-----
Confidence 12234579999999998743 2345689999999999999999999973211 11112122111111
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.+......+..+.++++. ||+.||++||++.|+++.
T Consensus 293 --~~~~~~~~~~~l~~li~~------~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 --PPEAPATASREFRHFISC------CLQREPAKRWSAMQLLQH 328 (353)
T ss_pred --CCCCCCccCHHHHHHHHH------HccCChhhCcCHHHHhcC
Confidence 011222334455555554 999999999999999873
No 111
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=313.18 Aligned_cols=270 Identities=25% Similarity=0.346 Sum_probs=193.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCC-----ceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRK-----TKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~l 849 (1117)
-.|...+++|.|+||.||+|.. .+++.||||+.-...+. =.+|+++|+++.|||||++.-+|.... ...+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 3567789999999999999984 45789999998755432 246999999999999999998875432 2358
Q ss_pred EEEecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC-Ccceecccccccc
Q 001238 850 FYDYMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER-YESCLADFGLARL 927 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfGla~~ 927 (1117)
||||||. +|.++++.. .....++...+.-+++|+.+||+|||+. +|+||||||+|+|+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999975 788777742 1122377778888999999999999998 99999999999999976 8999999999998
Q ss_pred ccCCCCCccccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHH------
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHL------ 1000 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~------ 1000 (1117)
+..+. +......|..|+|||.+. ...|+.+.||||.|||+.||+-|++-|.+... .+.++++++-.-
T Consensus 176 L~~~e-----pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt~e~ 249 (364)
T KOG0658|consen 176 LVKGE-----PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPTRED 249 (364)
T ss_pred eccCC-----CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCCHHH
Confidence 87643 334567899999999775 47899999999999999999999999976322 223333332110
Q ss_pred -hc-CCCCccccCcccCCCCchh-H--HHHHHHHhHhhhccCCCCCCCCCHHHHHH--HHHhhhcC
Q 001238 1001 -KS-KKDPVEVLDPKLQGHPDTQ-I--QEMLQALGISLLCTSNRAEDRPTMKDVAA--LLREIRQE 1059 (1117)
Q Consensus 1001 -~~-~~~~~~~~~~~l~~~~~~~-~--~~~l~~~~i~~~C~~~~p~~RPs~~~v~~--~L~~~~~~ 1059 (1117)
.. .....+...|.+...+-.. . ..-.+.+++...++..+|.+|.++.|+++ .+++++..
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 00 0000111112222221000 0 00012334455599999999999999876 45555543
No 112
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.1e-34 Score=322.56 Aligned_cols=259 Identities=22% Similarity=0.358 Sum_probs=200.0
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCc
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 846 (1117)
.+++|++.+.||+|+||.||+|... .++.||+|++.... .....++.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567999999999999999998642 35679999986432 2234568899999999999999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCccee
Q 001238 847 KLLFYDYMPNGTLGMLLHDGEC-------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCL 919 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 919 (1117)
.++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999865321 12367889999999999999999998 9999999999999999999999
Q ss_pred ccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHH
Q 001238 920 ADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRD 998 (1117)
Q Consensus 920 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~ 998 (1117)
+|||+++....... ........+++.|+|||++....++.++|||||||++|||++ |..||.... .......
T Consensus 161 ~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-----~~~~~~~ 233 (277)
T cd05062 161 GDFGMTRDIYETDY--YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-----NEQVLRF 233 (277)
T ss_pred CCCCCccccCCcce--eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Confidence 99999986543211 111222345788999999998899999999999999999999 788986421 1122222
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
...... +..+...+..+.+++. .|++.+|++||++.++++.+++
T Consensus 234 ~~~~~~-------~~~~~~~~~~~~~li~------~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 234 VMEGGL-------LDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHcCCc-------CCCCCCCCHHHHHHHH------HHcCCChhhCcCHHHHHHHhhC
Confidence 111111 1112222334444444 4999999999999999998763
No 113
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.8e-37 Score=340.07 Aligned_cols=367 Identities=29% Similarity=0.443 Sum_probs=319.7
Q ss_pred EEEEeccccccc-CcCCccccccccCCeEeccCCCCCCCchhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhcc
Q 001238 76 VVGLDLRYVDLL-GHVPTNFTSLLSLNRLVLSGTNLTGSIPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLN 154 (1117)
Q Consensus 76 v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 154 (1117)
|.++|++++++. +.+|.+...++.++.|.|...++. .+|.+++.|.+|++|.+++|++. .+..++..|+.|+.+++.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhh
Confidence 678999999999 579999999999999999999998 89999999999999999999998 788899999999999999
Q ss_pred CCCcC-CCCchhccCCcCCcEEeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCcc-cccccccccccccccccc
Q 001238 155 SNQLE-GAIPIQIGNLSSLTQLFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHE-IGNCTNLVMIGLAETSIS 232 (1117)
Q Consensus 155 ~N~l~-~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~-l~~l~~L~~L~l~~~~~~ 232 (1117)
.|++. .-||..|..|..|++||||+|+++ +.|..+..-+++-+|+|++|++ .++|.. +-+++.|-+|+|++|.+.
T Consensus 87 ~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~I--etIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNI--ETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred ccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcc--ccCCchHHHhhHhHhhhccccchhh
Confidence 99996 358999999999999999999998 6999999999999999999975 578876 468999999999999986
Q ss_pred ccCCcccccccccceeecccccccccCCcCCCCCCCCcEEecCCCccC-CcCCccCCCCCCCcEEEccCCcCcccCCcCC
Q 001238 233 GFLPPTLGLLKRLQTIAIYTALLSGQIPPELGDCTELQYIYLYENALT-GSIPSKLGNLKNLVNLFLWQNNLVGIIPPEL 311 (1117)
Q Consensus 233 ~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~ 311 (1117)
.+|+.+..|..|++|.+++|.+.-.--..+-.+++|+.|.+++.+=+ ..+|.++..|.+|..++|+.|++. ..|+.+
T Consensus 164 -~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecl 241 (1255)
T KOG0444|consen 164 -MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECL 241 (1255)
T ss_pred -hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHH
Confidence 67888999999999999999765433334556788888888886432 368888889999999999999998 788889
Q ss_pred CCCCCCCEEEcCCCcCCCCCccccCCCCCcceEecccccccCcccccccCCCCCcEEEecCcccc-CCCCcccccccchH
Q 001238 312 GNCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQIT-GAIPSEFGNLSNLT 390 (1117)
Q Consensus 312 ~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~ 390 (1117)
.++++|+.|+||+|+|+ .+.-..+...+|++|+||.|+++ .+|..++++++|+.|.+.+|+++ .-+|+.++.+.+|+
T Consensus 242 y~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Le 319 (1255)
T KOG0444|consen 242 YKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLE 319 (1255)
T ss_pred hhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhH
Confidence 99999999999999998 55556677788999999999998 88889999999999999999876 45788889999999
Q ss_pred HHHhccccccccCCCCCCcccccceeecccccccCCCcccccCCCCCCeeeccCccCCCCCCC
Q 001238 391 LLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPP 453 (1117)
Q Consensus 391 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 453 (1117)
.+..++|++. .+|+.++.|..|+.|.|+.|++. .+|+++--++.|+.||+..|.=--.+|.
T Consensus 320 vf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 320 VFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred HHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 9999999988 88899999999999999999987 5888888888999999988865434444
No 114
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.1e-35 Score=347.41 Aligned_cols=257 Identities=23% Similarity=0.335 Sum_probs=202.5
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCC----
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRK---- 845 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 845 (1117)
...++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+..+..++|+||+++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3456899999999999999999974 578999999987542 233456888999999999999999988765432
Q ss_pred ----ceEEEEEecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceec
Q 001238 846 ----TKLLFYDYMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLA 920 (1117)
Q Consensus 846 ----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 920 (1117)
..++||||+++|+|.++++... ....+++..+..++.|++.||+|+|++ +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 3579999999999999887532 234589999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHH
Q 001238 921 DFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHL 1000 (1117)
Q Consensus 921 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~ 1000 (1117)
|||+++........ .......||+.|+|||++....++.++|||||||++|||++|+.||... .....+....
T Consensus 186 DFGls~~~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~~~~~~ 258 (496)
T PTZ00283 186 DFGFSKMYAATVSD--DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEVMHKTL 258 (496)
T ss_pred ecccCeeccccccc--cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHh
Confidence 99999876432111 1223467999999999999999999999999999999999999999642 2233333333
Q ss_pred hcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1001 KSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1001 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
..... .++...+..+.+++.. |++.+|++||++.++++.
T Consensus 259 ~~~~~-------~~~~~~~~~l~~li~~------~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGRYD-------PLPPSISPEMQEIVTA------LLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCCCC-------CCCCCCCHHHHHHHHH------HcccChhhCcCHHHHHhC
Confidence 22211 1223334455555555 999999999999998763
No 115
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.7e-34 Score=333.23 Aligned_cols=201 Identities=25% Similarity=0.309 Sum_probs=173.5
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
..++|++.+.||+|+||.||+++.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+++..|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3467999999999999999999864 5889999998642 22234457889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++...
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999998754 278899999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCccccCCccccccccCChhhhccC----CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMT----KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
... ........||+.|+|||++... .++.++||||+||++|||++|+.||..
T Consensus 194 ~~~---~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 194 ETG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred cCC---ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 321 1122356799999999998754 378899999999999999999999964
No 116
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.6e-34 Score=317.61 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=202.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC----CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP----SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++|++.+.||+|+||+||+|.++ +...||||+++... ......|.+|++++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 46889999999999999999864 24579999987543 23345788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++++|.+++.... +.+++.++.+++.|++.|++|||+. +|+||||||+||++++++.++++|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 99999999999997643 3589999999999999999999998 999999999999999999999999999987752
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.... .......++..|+|||.+....++.++||||||+++|||++ |..||... ..... ..........+
T Consensus 159 ~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~--~~~~~---~~~~~~~~~~~--- 228 (266)
T cd05033 159 SEAT--YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM--SNQDV---IKAVEDGYRLP--- 228 (266)
T ss_pred cccc--eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC--CHHHH---HHHHHcCCCCC---
Confidence 2111 11112345678999999998899999999999999999998 99998542 11122 22211111111
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
.+...+..+.+++. .|++.+|++||++.++++.|+++
T Consensus 229 ----~~~~~~~~l~~li~------~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 ----PPMDCPSALYQLML------DCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ----CCCCCCHHHHHHHH------HHcCCCcccCcCHHHHHHHHHhh
Confidence 11222334444444 49999999999999999999875
No 117
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.2e-35 Score=333.80 Aligned_cols=200 Identities=25% Similarity=0.377 Sum_probs=167.6
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecC-----CceE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANR-----KTKL 848 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~ 848 (1117)
+|++.++||+|+||.||+|.. .+|+.||||++... ......++.+|++++++++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478889999999999999975 46899999998743 222345688999999999999999999987543 2479
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+||||++ ++|.+++... +.+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAN---DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 6888888654 2489999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCccccCCccccccccCChhhhcc--CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANM--TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
....... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 154 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 154 FNDTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred ccccCcc-ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 4322111 12234579999999999865 6789999999999999999999999965
No 118
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.4e-34 Score=334.44 Aligned_cols=253 Identities=23% Similarity=0.277 Sum_probs=197.6
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
.++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 357889999999999999999754 6889999998643 222334578899999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999998754 278888999999999999999999 999999999999999999999999999986643
Q ss_pred CCCCccccCCccccccccCChhhhccC----CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCC
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMT----KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDP 1006 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1117)
.. ........||+.|+|||++... .++.++|||||||++|||++|+.||... ................
T Consensus 195 ~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----~~~~~~~~i~~~~~~~ 266 (370)
T cd05596 195 NG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMDHKNSL 266 (370)
T ss_pred CC---cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC-----CHHHHHHHHHcCCCcC
Confidence 21 1122345799999999988643 4789999999999999999999999642 1222233332221111
Q ss_pred ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCC--CCCHHHHHHH
Q 001238 1007 VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAED--RPTMKDVAAL 1052 (1117)
Q Consensus 1007 ~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~--RPs~~~v~~~ 1052 (1117)
. .+. ....+....++++. |+..+|++ ||++.++++.
T Consensus 267 -~--~~~-~~~~s~~~~~li~~------~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 267 -T--FPD-DIEISKQAKDLICA------FLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -C--CCC-cCCCCHHHHHHHHH------HccChhhccCCCCHHHHhcC
Confidence 0 011 01123445555554 88888987 9999999764
No 119
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.2e-37 Score=339.30 Aligned_cols=365 Identities=29% Similarity=0.450 Sum_probs=218.8
Q ss_pred cccCCeEeccCCCCC-CCchhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCcEE
Q 001238 97 LLSLNRLVLSGTNLT-GSIPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQL 175 (1117)
Q Consensus 97 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L 175 (1117)
|+.++-.|+++|.++ +.+|..+..++++++|-|...++. .+|++++.|.+|++|.+++|++. .+-..+..|+.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 345566788888888 458888888888888888888886 78888888888888888888887 555667777777777
Q ss_pred eccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeecccccc
Q 001238 176 FLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTALL 255 (1117)
Q Consensus 176 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~l 255 (1117)
++..|++.. .-
T Consensus 84 ~~R~N~LKn------------------------sG--------------------------------------------- 94 (1255)
T KOG0444|consen 84 IVRDNNLKN------------------------SG--------------------------------------------- 94 (1255)
T ss_pred hhhcccccc------------------------CC---------------------------------------------
Confidence 777777652 11
Q ss_pred cccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCcccc
Q 001238 256 SGQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTL 335 (1117)
Q Consensus 256 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l 335 (1117)
+|+.+..+..|+.|||++|+++ +.|..+..-+++-.|+|++|+|..+..+.|.+++.|-.||||+|++. .+|.-+
T Consensus 95 ---iP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~ 169 (1255)
T KOG0444|consen 95 ---IPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQI 169 (1255)
T ss_pred ---CCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHH
Confidence 3334444444555555555555 45555555555555555555555333333445555555555555555 333345
Q ss_pred CCCCCcceEecccccccCcccccccCCCCCcEEEecCcccc-CCCCcccccccchHHHHhccccccccCCCCCCcccccc
Q 001238 336 GNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQIT-GAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLE 414 (1117)
Q Consensus 336 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 414 (1117)
..|..|++|+|++|.+.-..-..+-.+++|+.|.+++.+-+ ..+|.++..+.+|..+|+++|.+. .+|+.+-++.+|+
T Consensus 170 RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~Lr 248 (1255)
T KOG0444|consen 170 RRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLR 248 (1255)
T ss_pred HHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhh
Confidence 55555555555555554333333344455555555554422 345555555556666666666655 5555555556666
Q ss_pred eeecccccccCCCcccccCCCCCCeeeccCccCCCCCCCCcccccccceeccCCCccc-ccCCCCcCCCCCCCEEEccCC
Q 001238 415 AVDLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLT-GFIPPEIGNLKNLNFLDLGSN 493 (1117)
Q Consensus 415 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N 493 (1117)
.|+||+|+|+ .+........+|++|+|+.|+++ ..|.+++.++.|+.|.+.+|+++ .-+|..++.+.+|+++..++|
T Consensus 249 rLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN 326 (1255)
T KOG0444|consen 249 RLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANN 326 (1255)
T ss_pred eeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhcc
Confidence 6666666655 34444444555566666666665 45556666666666666666554 234555666666666666666
Q ss_pred cCCCCCCcccccCCCCceEEccCCccccccchhhhcccccccccccCCc
Q 001238 494 RLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNS 542 (1117)
Q Consensus 494 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 542 (1117)
++. ..|..++.+..|+.|.|+.|++- .+|+++.-++.|+.||+..|.
T Consensus 327 ~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 327 KLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred ccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 665 55666666666666666666655 456666666666666666654
No 120
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.5e-34 Score=327.27 Aligned_cols=240 Identities=21% Similarity=0.317 Sum_probs=190.4
Q ss_pred CeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||.||+|+.+ +|+.||+|+++... ......+..|.+++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999864 68899999997532 22344567788887754 899999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++... +.+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 150 (316)
T cd05620 81 GDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD---- 150 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC----
Confidence 9999888754 3488999999999999999999999 99999999999999999999999999987532211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||... . ..+......... +.++.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~--~---~~~~~~~~~~~~--------~~~~~ 217 (316)
T cd05620 151 NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD--D---EDELFESIRVDT--------PHYPR 217 (316)
T ss_pred CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--C---HHHHHHHHHhCC--------CCCCC
Confidence 1233467999999999999999999999999999999999999999642 1 112222221111 22233
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHH-HHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMK-DVA 1050 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~-~v~ 1050 (1117)
..+..+.++++. |++.||++||++. ++.
T Consensus 218 ~~~~~~~~li~~------~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 WITKESKDILEK------LFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCHHHHHHHHH------HccCCHHHcCCChHHHH
Confidence 344455666655 9999999999974 554
No 121
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-34 Score=329.52 Aligned_cols=241 Identities=19% Similarity=0.256 Sum_probs=191.3
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhccCC-CCcceEEeeeecCCceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRH-RNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv~ 851 (1117)
+|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|++++..++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999754 5789999999753 22334567889999999976 46888999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV---GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 999999999988654 3488999999999999999999999 9999999999999999999999999998753221
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.........
T Consensus 155 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~i~~~~-------- 217 (324)
T cd05587 155 G----KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-----EDELFQSIMEHN-------- 217 (324)
T ss_pred C----CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCC--------
Confidence 1 12234579999999999999999999999999999999999999996421 122222222221
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTM 1046 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~ 1046 (1117)
..++...+....++++. |++.+|.+|++.
T Consensus 218 ~~~~~~~~~~~~~li~~------~l~~~P~~R~~~ 246 (324)
T cd05587 218 VSYPKSLSKEAVSICKG------LLTKHPAKRLGC 246 (324)
T ss_pred CCCCCCCCHHHHHHHHH------HhhcCHHHcCCC
Confidence 12223334444555554 999999999975
No 122
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.1e-34 Score=321.53 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=200.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-----CCCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-----PSGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
.+|++.+.||+|+||+||+|.. .+++.||+|.++... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3577889999999999999873 356789999987533 2234678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC
Q 001238 850 FYDYMPNGTLGMLLHDGEC--------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY 915 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~ 915 (1117)
||||+++++|.+++..... ...+++.++..++.|++.||+|||++ +|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999998853211 12478899999999999999999999 999999999999999999
Q ss_pred cceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHH
Q 001238 916 ESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQ 994 (1117)
Q Consensus 916 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~ 994 (1117)
.+||+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++ |..||.+.. .....+
T Consensus 162 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~~ 237 (283)
T cd05090 162 HVKISDLGLSREIYSADY--YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVIE 237 (283)
T ss_pred cEEeccccccccccCCcc--eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHH
Confidence 999999999987643221 112233456778999999988889999999999999999998 999986421 112222
Q ss_pred HHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 995 WVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
.+ ...... ..+...+..+.+++. .|++.+|++||++.+|.+.++.
T Consensus 238 ~~----~~~~~~------~~~~~~~~~~~~li~------~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MV----RKRQLL------PCSEDCPPRMYSLMT------ECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HH----HcCCcC------CCCCCCCHHHHHHHH------HHcccCcccCcCHHHHHHHhhc
Confidence 22 111111 112223334444444 4999999999999999998864
No 123
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1e-34 Score=338.18 Aligned_cols=202 Identities=25% Similarity=0.316 Sum_probs=172.1
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
.|++.++||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 578889999999999999975 468899999987532 2234568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++|+|.+++.+. +.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 99999999998764 3478899999999999999999999 99999999999999999999999999985432100
Q ss_pred CC-------------------------------------------ccccCCccccccccCChhhhccCCCCcCCCeeehh
Q 001238 933 GG-------------------------------------------SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYG 969 (1117)
Q Consensus 933 ~~-------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG 969 (1117)
.. ........+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 00 00011235799999999999999999999999999
Q ss_pred hhHHHHHhCCCCCCC
Q 001238 970 VVLLEIITGKKPVDA 984 (1117)
Q Consensus 970 ~vl~ell~g~~P~~~ 984 (1117)
|++|||++|+.||..
T Consensus 236 vil~elltG~~Pf~~ 250 (382)
T cd05625 236 VILYEMLVGQPPFLA 250 (382)
T ss_pred HHHHHHHhCCCCCCC
Confidence 999999999999965
No 124
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.8e-34 Score=315.17 Aligned_cols=253 Identities=29% Similarity=0.447 Sum_probs=200.6
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|++.++||+|+||.||+|..+++..||+|.++.... ..+.+.+|++++++++|||++++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46888999999999999999988888999999876433 4567999999999999999999999875 456899999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.++++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 84 KGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 9999999876432 3489999999999999999999999 999999999999999999999999999986643211
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......++..|+|||+.....++.++||||||+++|||++ |+.||.... ..+......... . +..
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-----~~~~~~~~~~~~-~------~~~ 224 (260)
T cd05070 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-----NREVLEQVERGY-R------MPC 224 (260)
T ss_pred -ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCC-C------CCC
Confidence 11122345678999999988889999999999999999999 899986421 112222221111 1 111
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
+...+..+.+++. .|+..+|++||+++++.+.|+.
T Consensus 225 ~~~~~~~~~~li~------~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 PQDCPISLHELML------QCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCcCCHHHHHHHH------HHcccCcccCcCHHHHHHHHhc
Confidence 2223334555554 4999999999999999998875
No 125
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=8.6e-35 Score=338.17 Aligned_cols=202 Identities=26% Similarity=0.332 Sum_probs=172.4
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
+|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 588999999999999999975 468999999986432 2234568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++|+|.+++... +.+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRL---GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 99999999998764 3478899999999999999999999 99999999999999999999999999985331100
Q ss_pred CC---------------------------------------ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHH
Q 001238 933 GG---------------------------------------SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLL 973 (1117)
Q Consensus 933 ~~---------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ 973 (1117)
.. .........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00 000112357999999999999999999999999999999
Q ss_pred HHHhCCCCCCC
Q 001238 974 EIITGKKPVDA 984 (1117)
Q Consensus 974 ell~g~~P~~~ 984 (1117)
||++|+.||..
T Consensus 236 ell~G~~Pf~~ 246 (376)
T cd05598 236 EMLVGQPPFLA 246 (376)
T ss_pred ehhhCCCCCCC
Confidence 99999999965
No 126
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.6e-34 Score=328.80 Aligned_cols=240 Identities=24% Similarity=0.285 Sum_probs=186.9
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHH-HHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIA-TLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|+. .+|+.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999975 468999999987531 222344555555 46778999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|..++... +.+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---- 150 (325)
T cd05604 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS---- 150 (325)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC----
Confidence 9999888654 3488999999999999999999999 99999999999999999999999999987543211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.......... .+..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~-----~~~~~~~~~~~~~~--------~~~~ 217 (325)
T cd05604 151 DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR-----DVAEMYDNILHKPL--------VLRP 217 (325)
T ss_pred CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC-----CHHHHHHHHHcCCc--------cCCC
Confidence 1233557999999999999999999999999999999999999999642 12222333222211 1111
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVA 1050 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~ 1050 (1117)
..+....++++. |++.+|.+||++++.+
T Consensus 218 ~~~~~~~~ll~~------ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 218 GASLTAWSILEE------LLEKDRQRRLGAKEDF 245 (325)
T ss_pred CCCHHHHHHHHH------HhccCHHhcCCCCCCH
Confidence 223344444444 9999999999876433
No 127
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=322.38 Aligned_cols=257 Identities=27% Similarity=0.455 Sum_probs=203.5
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC---CC--cEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP---SG--LTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~---~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 848 (1117)
.+..+..+.||+|-||.||+|... .| -.||||.-+.. .....+.|..|+.+|++++|||||+++|+|.+ ...+
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence 345667789999999999999632 33 35899988764 34456789999999999999999999999876 5689
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+|||.++-|.|..+++.++ ..++..+...++.|++.||+|||++ .+|||||..+|||+....-+|++|||++|.+
T Consensus 467 ivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhc
Confidence 9999999999999999865 3488999999999999999999999 9999999999999999999999999999998
Q ss_pred cCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
.++.. +.+. ...-.+.|||||-+..+.++.++|||.|||.+||++. |..||.+....+ +.- ++..+..
T Consensus 542 ed~~y--YkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD--VI~----~iEnGeR-- 610 (974)
T KOG4257|consen 542 EDDAY--YKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD--VIG----HIENGER-- 610 (974)
T ss_pred cccch--hhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc--eEE----EecCCCC--
Confidence 76532 2222 3345678999999999999999999999999999988 999997642221 111 1111111
Q ss_pred cccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1008 EVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1008 ~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
...+..++..+..++.. ||+.+|.+||.+.++.+.|.++.+
T Consensus 611 ----lP~P~nCPp~LYslmsk------cWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 611 ----LPCPPNCPPALYSLMSK------CWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ----CCCCCCCChHHHHHHHH------HhccCcccCCcHHHHHHHHHHHHH
Confidence 11222233334444444 999999999999999998877654
No 128
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.8e-34 Score=322.04 Aligned_cols=266 Identities=25% Similarity=0.364 Sum_probs=198.0
Q ss_pred CCCCCCeeeecCCeEEEEEE-----cCCCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecC--CceE
Q 001238 777 SLTAGNIIGQGRSGIVYKVT-----LPSGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTKL 848 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 848 (1117)
.|++.+.||+|+||+||++. ..+++.||+|.++.... ...+.+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 34888999999999998754 24678999999875432 2356788999999999999999999987654 3578
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+||||+++++|.+++... .+++.++..++.|++.|++|||++ +|+||||||+||++++++.++|+|||+++..
T Consensus 85 lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 999999999999998754 289999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
...... ........++..|+|||.+....++.++||||||+++|||++|+.||......-........... ......+
T Consensus 158 ~~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 235 (283)
T cd05080 158 PEGHEY-YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQM-TVVRLIE 235 (283)
T ss_pred CCcchh-hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccccc-chhhhhh
Confidence 532211 11122234567799999998889999999999999999999999998643211000000000000 0000000
Q ss_pred c----cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1009 V----LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1009 ~----~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
. .....+...+..+.+++. .||+.+|++||+++++++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~li~------~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 236 LLERGMRLPCPKNCPQEVYILMK------NCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHH------HHhccChhhCCCHHHHHHHHHHhh
Confidence 0 001112233344555444 499999999999999999998764
No 129
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.3e-34 Score=351.73 Aligned_cols=265 Identities=24% Similarity=0.322 Sum_probs=201.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.++||+|+||.||+|... +|+.||+|+++... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47889999999999999999754 58999999987532 223457889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCC--------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 852 DYMPNGTLGMLLHDGE--------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
||++||+|.+++.... .....++..+++++.||++||+|||++ +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 112356778899999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCC--------------ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCC
Q 001238 924 LARLVEDDSGG--------------SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDG 989 (1117)
Q Consensus 924 la~~~~~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~ 989 (1117)
+++........ ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-- 236 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-- 236 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch--
Confidence 99876221110 01112235799999999999999999999999999999999999999965211
Q ss_pred hhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCC-CHHHHHHHHHhhhcC
Q 001238 990 QHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRP-TMKDVAALLREIRQE 1059 (1117)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-s~~~v~~~L~~~~~~ 1059 (1117)
.... ..... ..+... .+ ....+..+.+ ++..|++.||++|| +++++.+.|+...+.
T Consensus 237 ~ki~--~~~~i---~~P~~~-~p--~~~iP~~L~~------LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 237 RKIS--YRDVI---LSPIEV-AP--YREIPPFLSQ------IAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhhh--hhhhc---cChhhc-cc--cccCCHHHHH------HHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 1110 01100 011110 00 0112233344 44459999999996 677788888776543
No 130
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.9e-34 Score=321.04 Aligned_cols=246 Identities=22% Similarity=0.258 Sum_probs=191.3
Q ss_pred eeecCCeEEEEEEc-CCCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 784 IGQGRSGIVYKVTL-PSGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
||+|+||+||++.. .+|+.||+|++..... ...+.+..|++++++++||||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999875 4689999999875422 1234577899999999999999999999999999999999999999
Q ss_pred hhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcccc
Q 001238 860 GMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSA 938 (1117)
Q Consensus 860 ~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 938 (1117)
.+++... .....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||+++...... ..
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~----~~ 153 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ----SK 153 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCC----cc
Confidence 8877542 2234589999999999999999999999 99999999999999999999999999998664322 12
Q ss_pred CCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCC
Q 001238 939 NPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHP 1018 (1117)
Q Consensus 939 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1018 (1117)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............. . ..++...
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~---~-----~~~~~~~ 224 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRILND---S-----VTYPDKF 224 (280)
T ss_pred ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc-hhHHHHHHhhccc---C-----CCCcccC
Confidence 23457899999999999999999999999999999999999999642211 1111111111111 0 1122233
Q ss_pred chhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1019 DTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1019 ~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
+..+.+++.. |++.||++|| +++++++
T Consensus 225 ~~~~~~li~~------~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 225 SPASKSFCEA------LLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CHHHHHHHHH------HhcCCHHHhcCCCCCCHHHHhc
Confidence 4455555555 9999999999 5666665
No 131
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.3e-34 Score=325.73 Aligned_cols=241 Identities=22% Similarity=0.310 Sum_probs=189.5
Q ss_pred CeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|... +++.||||+++... ......+..|..+++.. +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999854 57899999997542 22344566788888764 899999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 150 (316)
T cd05619 81 GDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD---- 150 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC----
Confidence 9999998754 2388999999999999999999999 99999999999999999999999999987543211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+......... +.++.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~i~~~~--------~~~~~ 217 (316)
T cd05619 151 AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----EEELFQSIRMDN--------PCYPR 217 (316)
T ss_pred CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC--------CCCCc
Confidence 12234578999999999998899999999999999999999999996421 112222211111 11222
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHH-HHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMK-DVAA 1051 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~-~v~~ 1051 (1117)
..+..+.+++.. |++.+|++||++. ++.+
T Consensus 218 ~~~~~~~~li~~------~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 218 WLTREAKDILVK------LFVREPERRLGVKGDIRQ 247 (316)
T ss_pred cCCHHHHHHHHH------HhccCHhhcCCChHHHHc
Confidence 334445555554 9999999999997 5543
No 132
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.4e-34 Score=327.05 Aligned_cols=241 Identities=19% Similarity=0.256 Sum_probs=190.7
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
+|.+.+.||+|+||+||+|... +++.||||+++... ......+..|.+++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999754 57899999987542 22234566788888777 5899999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV---GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 999999999888654 3488999999999999999999999 9999999999999999999999999999754321
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
. .......||+.|+|||++....++.++|||||||++|||++|+.||.... ............
T Consensus 155 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~-----~~~~~~~i~~~~-------- 217 (323)
T cd05616 155 G----VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIMEHN-------- 217 (323)
T ss_pred C----CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC--------
Confidence 1 12234579999999999999999999999999999999999999996421 122222222221
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTM 1046 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~ 1046 (1117)
..++...+....+++.. |++.+|++|++.
T Consensus 218 ~~~p~~~s~~~~~li~~------~l~~~p~~R~~~ 246 (323)
T cd05616 218 VAYPKSMSKEAVAICKG------LMTKHPGKRLGC 246 (323)
T ss_pred CCCCCcCCHHHHHHHHH------HcccCHHhcCCC
Confidence 11222333444555544 999999999974
No 133
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.1e-34 Score=326.62 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=192.6
Q ss_pred CeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|+.. +++.||||+++.. .....+.+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999754 5789999999753 223345677899998888 699999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 150 (318)
T cd05570 81 GDLMFHIQRS---GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG---- 150 (318)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC----
Confidence 9999888764 2489999999999999999999999 99999999999999999999999999987532211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ ..++.
T Consensus 151 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~i~~~~--------~~~~~ 217 (318)
T cd05570 151 VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQSILEDE--------VRYPR 217 (318)
T ss_pred CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHHHHcCC--------CCCCC
Confidence 12234578999999999999999999999999999999999999996421 122222222211 11222
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCH-----HHHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTM-----KDVAA 1051 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~-----~~v~~ 1051 (1117)
..+..+.++++. |++.||++||++ .++++
T Consensus 218 ~~~~~~~~li~~------~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 218 WLSKEAKSILKS------FLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred cCCHHHHHHHHH------HccCCHHHcCCCCCCCHHHHhc
Confidence 334455555555 999999999998 77755
No 134
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4e-34 Score=319.42 Aligned_cols=263 Identities=27% Similarity=0.393 Sum_probs=199.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-----CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeec--CCceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-----PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGAN--RKTKL 848 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~ 848 (1117)
++|++.+.||+|+||+||++.. .+++.||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4788899999999999999863 3578999999886655556789999999999999999999997654 34678
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+||||+++|+|.+++.... +.+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++..
T Consensus 84 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 9999999999999987542 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCC----------ChhHHHHHHH
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPD----------GQHVIQWVRD 998 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~----------~~~~~~~~~~ 998 (1117)
...... ........++..|+|||+..+..++.++||||||+++|||++|..|+...... .......+..
T Consensus 159 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 159 PQDKEY-YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred cCCCcc-eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 543211 11111223445699999999889999999999999999999988776432110 0000011111
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
....... .......+..+.+++ ..||+.+|++|||+.+|++.|+.+
T Consensus 238 ~~~~~~~------~~~~~~~~~~~~~li------~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 238 LLKNNGR------LPAPPGCPAEIYAIM------KECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHhcCCc------CCCCCCCCHHHHHHH------HHHccCChhhCCCHHHHHHHHHhc
Confidence 1111100 011122233444444 459999999999999999999875
No 135
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5e-34 Score=317.58 Aligned_cols=259 Identities=24% Similarity=0.362 Sum_probs=198.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCc----EEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGL----TVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
++|++.+.||+|+||+||+|.+. +++ .||+|.+.... .....++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46788899999999999999853 344 47778775332 2233567888889999999999999998754 55788
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
++||+++|+|.+++.... +.+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++...
T Consensus 86 i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 999999999999997643 3489999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.... ........++..|+|||++....++.++||||||+++||+++ |+.||.+..+ ....+ .+.......
T Consensus 161 ~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~----~~~~~~~~~- 231 (279)
T cd05111 161 PDDK--KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPD----LLEKGERLA- 231 (279)
T ss_pred CCCc--ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH----HHHCCCcCC-
Confidence 3221 112234557789999999988899999999999999999998 9999965311 11222 222221111
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEP 1060 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~ 1060 (1117)
.+ ...+..... ++..||+.+|++||++.++.+.+..+.+.+
T Consensus 232 --~~---~~~~~~~~~------li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 232 --QP---QICTIDVYM------VMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred --CC---CCCCHHHHH------HHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 11 112222333 444599999999999999999999877644
No 136
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-34 Score=335.81 Aligned_cols=194 Identities=24% Similarity=0.323 Sum_probs=168.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
..+|++.+.||+|+||.||++.. .+++.||+|+.. .+.+.+|++++++++|||||++++++......++|||+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 46799999999999999999974 568999999753 23578899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+. ++|..++... ..+++.+++.++.|+++||+|||++ +||||||||+||+++.++.+||+|||+++.......
T Consensus 165 ~~-~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 165 YK-TDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred CC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 95 6888777654 2388999999999999999999999 999999999999999999999999999975432211
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......||+.|+|||++....++.++||||+||++|||++|+.||..
T Consensus 238 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 238 ---NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred ---cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 122345799999999999988999999999999999999999988743
No 137
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4e-34 Score=314.21 Aligned_cols=250 Identities=28% Similarity=0.448 Sum_probs=198.8
Q ss_pred CCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+|++.+.||+|+||.||+|.++++..+|+|++.... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 478889999999999999988777889999986433 2345788999999999999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
++|.+++.... +.+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--- 155 (256)
T cd05059 84 GCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--- 155 (256)
T ss_pred CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc---
Confidence 99999987643 2489999999999999999999999 999999999999999999999999999986643211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......++..|+|||.+....++.++||||||+++|||++ |+.||..... ... ... ...... ...+
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~---~~~-~~~~~~------~~~~ 223 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEV---VES-VSAGYR------LYRP 223 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHH---HHH-HHcCCc------CCCC
Confidence 11112234568999999998999999999999999999999 8999864211 111 111 111111 1112
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
...+..+.+++. .|++.+|++||++.++++.|
T Consensus 224 ~~~~~~~~~li~------~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 KLAPTEVYTIMY------SCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCHHHHHHHH------HHhcCChhhCcCHHHHHHHh
Confidence 223444555444 49999999999999999876
No 138
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.4e-34 Score=320.09 Aligned_cols=259 Identities=25% Similarity=0.391 Sum_probs=201.3
Q ss_pred CCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
+|++.+.||+|+||.||+|... ....||+|.+..... ...+++.+|+.+++.++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999998742 235789998875432 234578899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCe
Q 001238 850 FYDYMPNGTLGMLLHDGE---------------------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHN 908 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~N 908 (1117)
||||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 999999999999876421 113478999999999999999999998 99999999999
Q ss_pred EEEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCC
Q 001238 909 ILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFP 987 (1117)
Q Consensus 909 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~ 987 (1117)
|++++++.+||+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++ |+.||.+..
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~- 234 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDS--YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA- 234 (290)
T ss_pred EEEcCCCcEEeccccccccccCccc--hhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC-
Confidence 9999999999999999986543221 112223345778999999988889999999999999999998 999996421
Q ss_pred CChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 988 DGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
...+.+. ...... ...+...+..+.++ +..|++.+|++||+++++++.|+++..
T Consensus 235 -~~~~~~~----~~~~~~------~~~~~~~~~~~~~~------i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 235 -PERLFNL----LKTGYR------MERPENCSEEMYNL------MLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HHHHHHH----HhCCCC------CCCCCCCCHHHHHH------HHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1122222 211111 11122233344444 445999999999999999999998764
No 139
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3e-34 Score=317.40 Aligned_cols=260 Identities=20% Similarity=0.347 Sum_probs=205.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||.||+|.. .+++.||||.+...+ ....+++.+|+++++.++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3678889999999999999984 578999999886532 223457889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 852 DYMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
||+++++|.+++.... ....+++.++++++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999886422 234589999999999999999999999 999999999999999999999999999886643
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.. .......++..|+|||++.+..++.++||||||+++|||++|..||..... ..............
T Consensus 159 ~~----~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~------ 225 (267)
T cd08229 159 KT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQCDY------ 225 (267)
T ss_pred CC----cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc---hHHHHhhhhhcCCC------
Confidence 21 112234688999999999988899999999999999999999999964221 12222222111110
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
.+......+..+..++.. |++.+|++|||+.+|.++++++.
T Consensus 226 ~~~~~~~~~~~~~~li~~------~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 226 PPLPSDHYSEELRQLVNM------CINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCCcccccHHHHHHHHH------hcCCCcccCCCHHHHHHHHhhhc
Confidence 011112233455555554 99999999999999999998763
No 140
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.8e-34 Score=318.76 Aligned_cols=256 Identities=25% Similarity=0.415 Sum_probs=201.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
++|...++||+|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4677889999999999999863 2466899999876655556789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCC------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcc
Q 001238 850 FYDYMPNGTLGMLLHDGEC------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYES 917 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~ 917 (1117)
||||+++++|.+++..... ...+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999876431 12478999999999999999999999 99999999999999999999
Q ss_pred eeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHH
Q 001238 918 CLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 918 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~ 996 (1117)
||+|||+++...... .........+++.|+|||.+....++.++|||||||++|||++ |++||..... . ..+
T Consensus 162 kL~dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~---~~~ 234 (280)
T cd05092 162 KIGDFGMSRDIYSTD--YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--T---EAI 234 (280)
T ss_pred EECCCCceeEcCCCc--eeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--H---HHH
Confidence 999999997654321 1111223345788999999998999999999999999999998 9999854211 1 112
Q ss_pred HHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 997 RDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
........ . ..+...+..+.+++.. ||+.||++||++.+|.+.|+
T Consensus 235 ~~~~~~~~-~------~~~~~~~~~~~~li~~------cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 ECITQGRE-L------ERPRTCPPEVYAIMQG------CWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHcCcc-C------CCCCCCCHHHHHHHHH------HccCChhhCCCHHHHHHHHh
Confidence 22211111 0 1112233445555555 99999999999999999885
No 141
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.4e-34 Score=321.10 Aligned_cols=256 Identities=24% Similarity=0.325 Sum_probs=199.5
Q ss_pred CCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
+|.+.+.||+|+||.||+|... .++.||+|+++..... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4667788999999999999753 3578999999754322 23568899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc
Q 001238 850 FYDYMPNGTLGMLLHDGE-------------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE 916 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~ 916 (1117)
++||+++++|.+++.... ....+++..+.+++.|++.||+|+|++ +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999885321 123478889999999999999999999 9999999999999999999
Q ss_pred ceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHH
Q 001238 917 SCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQW 995 (1117)
Q Consensus 917 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~ 995 (1117)
+||+|||+++....... ........+++.|+|||++....++.++||||||+++|||++ |..||.+. ...++
T Consensus 163 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-----~~~~~ 235 (283)
T cd05091 163 VKISDLGLFREVYAADY--YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY-----SNQDV 235 (283)
T ss_pred eEecccccccccccchh--eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-----CHHHH
Confidence 99999999986643211 112233456789999999988889999999999999999998 88888642 11222
Q ss_pred HHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 996 VRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
.......... ..+...+..+..++. .|++.+|++||++++|++.|+.
T Consensus 236 ~~~i~~~~~~-------~~~~~~~~~~~~li~------~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 IEMIRNRQVL-------PCPDDCPAWVYTLML------ECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHcCCcC-------CCCCCCCHHHHHHHH------HHhCCCcccCCCHHHHHHHhhC
Confidence 3222222111 112333444555444 4999999999999999998864
No 142
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.1e-34 Score=326.46 Aligned_cols=240 Identities=24% Similarity=0.293 Sum_probs=186.6
Q ss_pred CeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHH-HHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEI-ATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|... +++.||+|++.... ......+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999754 57889999987532 11223344444 456788999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++... +.+.+..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~---- 150 (325)
T cd05602 81 GELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---- 150 (325)
T ss_pred CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC----
Confidence 9999988764 2377888899999999999999999 99999999999999999999999999997543221
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+.......... .+..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~~--------~~~~ 217 (325)
T cd05602 151 GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----NTAEMYDNILNKPL--------QLKP 217 (325)
T ss_pred CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC-----CHHHHHHHHHhCCc--------CCCC
Confidence 1233457999999999999999999999999999999999999999642 11222222222211 1122
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVA 1050 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~ 1050 (1117)
..+....++++. |++.+|.+||++.+.+
T Consensus 218 ~~~~~~~~li~~------~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 218 NITNSARHLLEG------LLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCHHHHHHHHH------HcccCHHHCCCCCCCH
Confidence 233455565555 9999999999876443
No 143
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.7e-34 Score=313.22 Aligned_cols=253 Identities=28% Similarity=0.468 Sum_probs=202.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|++.++||+|+||.||+|..++++.||+|.+.... ...+++.+|++++++++||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 4688899999999999999998889999999987543 34568999999999999999999999864 467899999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||++.......
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 156 (260)
T cd05067 84 NGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNE--- 156 (260)
T ss_pred CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCC---
Confidence 999999887643 23489999999999999999999998 99999999999999999999999999997765321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
........++..|+|||++....++.++||||||+++||+++ |+.||.... .......+ ...... ..
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~----~~~~~~------~~ 224 (260)
T cd05067 157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVIQNL----ERGYRM------PR 224 (260)
T ss_pred cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHH----HcCCCC------CC
Confidence 112223345778999999998899999999999999999999 999996431 12222221 111111 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
+...+..+.+++.. |++.+|++||+++++.+.|+.
T Consensus 225 ~~~~~~~~~~li~~------~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 PDNCPEELYELMRL------CWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCHHHHHHHHH------HccCChhhCCCHHHHHHHhhc
Confidence 22233345555554 999999999999999999875
No 144
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.4e-34 Score=321.75 Aligned_cols=263 Identities=26% Similarity=0.417 Sum_probs=198.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC---------------CcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS---------------GLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLG 839 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~ 839 (1117)
++|++.+.||+|+||.||++.... ...||+|+++... ....+.|.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578899999999999999986532 2358999987542 223456899999999999999999999
Q ss_pred eeecCCceEEEEEecCCCChhhhhcCCCC---------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEE
Q 001238 840 WGANRKTKLLFYDYMPNGTLGMLLHDGEC---------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNIL 910 (1117)
Q Consensus 840 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nil 910 (1117)
++...+..++||||+++++|.+++..... ...+++..+++++.|+++|++|||+. +++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 99999999999999999999999865321 12368899999999999999999999 9999999999999
Q ss_pred EcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh--CCCCCCCCCCC
Q 001238 911 LGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT--GKKPVDASFPD 988 (1117)
Q Consensus 911 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~--g~~P~~~~~~~ 988 (1117)
+++++.+||+|||+++...... .........++..|+|||+...+.++.++|||||||++|||++ |..||... .
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~--~ 237 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGD--YYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL--S 237 (295)
T ss_pred EcCCCcEEecccccccccccCc--ceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc--C
Confidence 9999999999999998654321 1112223345778999999988899999999999999999998 66677542 1
Q ss_pred ChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 989 GQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
.................... .......+..+.+ ++..|++.+|++||++.+|++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~------li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 238 DEQVIENTGEFFRNQGRQIY---LSQTPLCPSPVFK------LMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred hHHHHHHHHHhhhhcccccc---CCCCCCCCHHHHH------HHHHHcCCCchhCcCHHHHHHHHh
Confidence 12222222222211111000 0111112233444 444599999999999999999886
No 145
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5e-34 Score=320.59 Aligned_cols=264 Identities=27% Similarity=0.422 Sum_probs=198.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-----------------CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-----------------SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRL 837 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l 837 (1117)
++|++.++||+|+||.||++... ++..||+|+++... ....+.+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999998532 24469999987543 2334678999999999999999999
Q ss_pred EeeeecCCceEEEEEecCCCChhhhhcCCCC--------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeE
Q 001238 838 LGWGANRKTKLLFYDYMPNGTLGMLLHDGEC--------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNI 909 (1117)
Q Consensus 838 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Ni 909 (1117)
++++...+..++||||+++|+|.+++..... ...+++.++.+++.|++.|++|||+. +|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 9999999999999999999999999876321 12377889999999999999999999 999999999999
Q ss_pred EEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh--CCCCCCCCCC
Q 001238 910 LLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT--GKKPVDASFP 987 (1117)
Q Consensus 910 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~--g~~P~~~~~~ 987 (1117)
+++.++.++|+|||+++....... ........++..|+|||......++.++|||||||++|||++ |..||....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~- 238 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS- 238 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc--eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC-
Confidence 999999999999999986543211 111223345678999999888889999999999999999998 778885421
Q ss_pred CChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 988 DGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
.................. ...+. +...+..+.+ ++..||+.+|++||++.+|.+.|++
T Consensus 239 -~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~------li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 239 -DEQVIENTGEFFRDQGRQ--VYLPK-PALCPDSLYK------LMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -hHHHHHHHHHHHhhcccc--ccCCC-CCCCCHHHHH------HHHHHcCCCcccCCCHHHHHHHHhC
Confidence 112222121111111000 01111 1122234444 4445999999999999999998863
No 146
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.8e-34 Score=332.86 Aligned_cols=262 Identities=27% Similarity=0.391 Sum_probs=203.3
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCCc-cchHHHHHHHHHHhccC-CCCcceEEeeeecCC
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIR-HRNIVRLLGWGANRK 845 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 845 (1117)
..++|.+.++||+|+||.||+|.+. .++.||+|+++.... ...+.+.+|++++.++. |||||++++++...+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3456888999999999999999743 346899999975432 22346889999999997 999999999999999
Q ss_pred ceEEEEEecCCCChhhhhcCCCC---------------------------------------------------------
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGEC--------------------------------------------------------- 868 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 868 (1117)
..++||||+++|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999865321
Q ss_pred --------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEE
Q 001238 869 --------------------------------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNIL 910 (1117)
Q Consensus 869 --------------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nil 910 (1117)
...+++..+.+++.|++.||+|||+. +|+||||||+||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEE
Confidence 12367788899999999999999998 9999999999999
Q ss_pred EcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCC
Q 001238 911 LGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDG 989 (1117)
Q Consensus 911 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~ 989 (1117)
+++++.+|++|||+++....... ........+++.|+|||.+....++.++|||||||++|||++ |+.||.....
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~-- 347 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSN--YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM-- 347 (401)
T ss_pred EeCCCEEEEEecCcceecccccc--cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc--
Confidence 99999999999999986543211 112223457889999999988889999999999999999998 8999864311
Q ss_pred hhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 990 QHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
.+.....+..... +..+...+..+.+++.. ||..+|++||++++|++.|+++.
T Consensus 348 ---~~~~~~~~~~~~~------~~~p~~~~~~l~~li~~------cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 ---NEQFYNAIKRGYR------MAKPAHASDEIYEIMQK------CWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ---hHHHHHHHHcCCC------CCCCCCCCHHHHHHHHH------HcCCChhHCcCHHHHHHHHHHHh
Confidence 1111122222111 11122233455555555 99999999999999999998763
No 147
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=7.4e-34 Score=314.18 Aligned_cols=260 Identities=22% Similarity=0.357 Sum_probs=206.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||.||+|... +|+.||+|.++.. +....+++.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999865 7899999988643 2233567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 852 DYMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
||+++|+|.+++.... ....+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++++|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999886532 234488999999999999999999999 999999999999999999999999999886543
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.. .......+++.|+|||.+.+..++.++|||||||++|+|++|+.||.... .............. .
T Consensus 159 ~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~--~---- 225 (267)
T cd08224 159 KT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEKCD--Y---- 225 (267)
T ss_pred CC----cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhcCC--C----
Confidence 21 11233468889999999988889999999999999999999999985422 22222222211111 0
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
.+......+..+.+++.. |+..+|++||++.+|+++++++.
T Consensus 226 ~~~~~~~~~~~~~~~i~~------cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 226 PPLPADHYSEELRDLVSR------CINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCChhhcCHHHHHHHHH------HcCCCcccCCCHHHHHHHHHHhc
Confidence 011111233345555544 99999999999999999998764
No 148
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.1e-34 Score=314.40 Aligned_cols=254 Identities=28% Similarity=0.426 Sum_probs=199.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|++.++||+|+||.||+|.+.++..||+|+++... ...+++.+|++++++++||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 4689999999999999999987777789999987533 24567899999999999999999999874 456799999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|+|.+++.... ...+++..+..++.|+++||+|+|+. +|+||||||+||++++++.++|+|||.++.......
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-- 157 (262)
T cd05071 84 KGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 157 (262)
T ss_pred CCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc--
Confidence 999999997643 23478999999999999999999999 999999999999999999999999999986643221
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......++..|+|||+.....++.++||||||+++|||++ |+.||..... . +......... .. ..
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--~---~~~~~~~~~~-~~------~~ 224 (262)
T cd05071 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--R---EVLDQVERGY-RM------PC 224 (262)
T ss_pred -ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--H---HHHHHHhcCC-CC------CC
Confidence 11223346778999999988899999999999999999999 8888864311 1 1112111111 00 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
....+..+.+ ++..|++.+|++||++.++.+.|+..
T Consensus 225 ~~~~~~~l~~------li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 225 PPECPESLHD------LMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ccccCHHHHH------HHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1222333444 44559999999999999999999864
No 149
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6e-34 Score=319.60 Aligned_cols=261 Identities=26% Similarity=0.353 Sum_probs=201.9
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCC
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRK 845 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 845 (1117)
..++|++.+.||+|+||.||++... ....||+|++.... .....++.+|+++++++ +||||+++++++...+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 3457888999999999999999753 23689999987542 22345688999999999 7999999999999999
Q ss_pred ceEEEEEecCCCChhhhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDG-------------ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG 912 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~ 912 (1117)
..+++|||+++|+|..+++.. ...+.+++..+++++.|++.||+|||+. +|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence 999999999999999998643 1234588999999999999999999998 999999999999999
Q ss_pred CCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChh
Q 001238 913 ERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQH 991 (1117)
Q Consensus 913 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~ 991 (1117)
+++.+||+|||+++....... ........++..|+|||+.....++.++|||||||++|||++ |..||....
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~----- 239 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDY--YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP----- 239 (293)
T ss_pred CCCeEEeCccccccccccccc--eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC-----
Confidence 999999999999987653211 111222335678999999988899999999999999999998 999986421
Q ss_pred HHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 992 VIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
..+.. ......... ..+...+..+.+ ++..|++.+|++||++.++++.|+++.
T Consensus 240 ~~~~~-~~~~~~~~~------~~~~~~~~~~~~------li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 240 VEELF-KLLKEGYRM------EKPQNCTQELYH------LMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHH-HHHHcCCcC------CCCCCCCHHHHH------HHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111 111111111 111222233444 444599999999999999999998764
No 150
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.2e-34 Score=320.01 Aligned_cols=264 Identities=28% Similarity=0.439 Sum_probs=201.1
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcCC-----------------CcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcce
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLPS-----------------GLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVR 836 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~ 836 (1117)
..+|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578999999999999999987432 3468999987543 234567889999999999999999
Q ss_pred EEeeeecCCceEEEEEecCCCChhhhhcCCCC--------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCe
Q 001238 837 LLGWGANRKTKLLFYDYMPNGTLGMLLHDGEC--------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHN 908 (1117)
Q Consensus 837 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~N 908 (1117)
+++++...+..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999999999999999999999999876431 12489999999999999999999999 99999999999
Q ss_pred EEEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh--CCCCCCCCC
Q 001238 909 ILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT--GKKPVDASF 986 (1117)
Q Consensus 909 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~--g~~P~~~~~ 986 (1117)
|+++.++.++++|||+++...... .........+++.|+|||++....++.++|||||||++|||++ |..||...
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~- 237 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSD--YYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL- 237 (296)
T ss_pred eeecCCCceEEccccceeecccCc--ceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc-
Confidence 999999999999999998654321 1122234456789999999988889999999999999999998 67787542
Q ss_pred CCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 987 PDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
........+....+........ + .+...+..+.+ ++..|++.+|++||++.+|++.|+
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~l~~------li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 238 -TDQQVIENAGHFFRDDGRQIYL--P-RPPNCPKDIYE------LMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -ChHHHHHHHHhccccccccccC--C-CccCCCHHHHH------HHHHHhccChhcCCCHHHHHHHhc
Confidence 1222222222221111111110 1 11122233344 455599999999999999999875
No 151
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.6e-34 Score=314.78 Aligned_cols=256 Identities=26% Similarity=0.389 Sum_probs=197.0
Q ss_pred CCCCCeeeecCCeEEEEEEcCC----CcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCc-----
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPS----GLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT----- 846 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 846 (1117)
|++.+.||+|+||.||+|.... +..||+|+++... ....+.+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678999999999999997532 4689999987542 2234578999999999999999999998766554
Q ss_pred -eEEEEEecCCCChhhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccc
Q 001238 847 -KLLFYDYMPNGTLGMLLHDGE---CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADF 922 (1117)
Q Consensus 847 -~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 922 (1117)
.++||||+++|+|..++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 789999999999998885432 123589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHh
Q 001238 923 GLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLK 1001 (1117)
Q Consensus 923 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 1001 (1117)
|+++........ .......++..|+|||.+....++.++||||||+++|||++ |..||.... .. +.......
T Consensus 158 g~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--~~---~~~~~~~~ 230 (273)
T cd05035 158 GLSKKIYSGDYY--RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--NH---EIYDYLRH 230 (273)
T ss_pred cceeeccccccc--cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HH---HHHHHHHc
Confidence 999876533211 11222345678999999988889999999999999999999 899986421 11 22222111
Q ss_pred cCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1002 SKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1002 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
.. . +..+...+..+.+++ ..|++.||++||++.++++.|+++
T Consensus 231 ~~-~------~~~~~~~~~~~~~li------~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GN-R------LKQPEDCLDELYDLM------YSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC-C------CCCCcCCCHHHHHHH------HHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 1 111222333444444 449999999999999999999875
No 152
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-35 Score=324.35 Aligned_cols=254 Identities=26% Similarity=0.440 Sum_probs=204.1
Q ss_pred CCCCCCeeeecCCeEEEEEEcC--CCc--EEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP--SGL--TVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
..+..++||+|.||+|++|.|. +|+ .||||.++..... ..+.|.+|+.+|.+|+|||++++||...+ ....+||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 4556688999999999999874 344 6899999876544 56789999999999999999999998877 6778999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|.++.|+|.+.++. ...+.+-......++.|||.|+.||.++ ++||||+..+|+++-....+||+|||+.|.+...
T Consensus 190 ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999998 3445688889999999999999999999 9999999999999999999999999999988765
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.+. +...........|+|||.++...++.++|||+|||++|||++ |+.||.+- .-.++++.. +.+...
T Consensus 266 ed~-Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-----~g~qIL~~i-D~~erL---- 334 (1039)
T KOG0199|consen 266 EDM-YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-----RGIQILKNI-DAGERL---- 334 (1039)
T ss_pred Ccc-eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-----CHHHHHHhc-cccccC----
Confidence 433 333344456778999999999999999999999999999999 89999652 222222222 111111
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
++ +..+++.+..+++. ||..+|++||++..|.+.+-
T Consensus 335 -pR-Pk~csedIY~imk~------cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 335 -PR-PKYCSEDIYQIMKN------CWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred -CC-CCCChHHHHHHHHH------hccCCccccccHHHHHHhHH
Confidence 11 22334455555554 99999999999999986543
No 153
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.3e-34 Score=330.20 Aligned_cols=254 Identities=21% Similarity=0.281 Sum_probs=195.3
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
..++|++.+.||+|+||.||+++.+ +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 4578999999999999999999864 5889999998642 22233457889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 121 v~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 121 VMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 99999999999998754 278889999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCccccCCccccccccCChhhhccC----CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCC
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMT----KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKD 1005 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1117)
... ........||+.|+|||++... .++.++|||||||++|||++|+.||... ...............
T Consensus 194 ~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~ 265 (371)
T cd05622 194 KEG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMNHKNS 265 (371)
T ss_pred cCC---cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCc
Confidence 321 1122356799999999998653 3789999999999999999999999642 222223333222111
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCC--CCCHHHHHHH
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAED--RPTMKDVAAL 1052 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~--RPs~~~v~~~ 1052 (1117)
... +. ....+.....++.. |+..++.+ ||++.++.+.
T Consensus 266 -~~~--~~-~~~~s~~~~~li~~------~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 266 -LTF--PD-DNDISKEAKNLICA------FLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred -ccC--CC-cCCCCHHHHHHHHH------HcCChhhhcCCCCHHHHhcC
Confidence 111 11 11233344554444 77643333 6788888764
No 154
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-34 Score=307.61 Aligned_cols=255 Identities=22% Similarity=0.277 Sum_probs=199.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|.-|+||+++..+ +..+|+|++.+.. .....+.+.|-+||+.+.||.++.+|+.++.++..|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 457788899999999999998654 5899999997642 333456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|||+||+|..+.+++. .+.+++..++-++.+|+-||+|||.. |||+|||||+||||.++|++-|+||.++......
T Consensus 157 eyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999988865 45599999999999999999999999 9999999999999999999999999987543210
Q ss_pred C-------------------------------CCc---------------------cccCCccccccccCChhhhccCCC
Q 001238 932 S-------------------------------GGS---------------------FSANPQFAGSYGYIAPEYANMTKI 959 (1117)
Q Consensus 932 ~-------------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~ 959 (1117)
. ... ......++||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 000 011235789999999999999999
Q ss_pred CcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCC
Q 001238 960 SEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNR 1039 (1117)
Q Consensus 960 ~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~ 1039 (1117)
+.++|.|+|||++|||+.|+.||.+... . +.+..++.+....++. + ......+++++. -+.+|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~-~----~Tl~NIv~~~l~Fp~~--~----~vs~~akDLIr~------LLvKd 375 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNN-K----ETLRNIVGQPLKFPEE--P----EVSSAAKDLIRK------LLVKD 375 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCc-h----hhHHHHhcCCCcCCCC--C----cchhHHHHHHHH------HhccC
Confidence 9999999999999999999999976322 2 2233333333222111 1 112334454444 67789
Q ss_pred CCCCCC----HHHHHH
Q 001238 1040 AEDRPT----MKDVAA 1051 (1117)
Q Consensus 1040 p~~RPs----~~~v~~ 1051 (1117)
|.+|-. +.||-+
T Consensus 376 P~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKR 391 (459)
T ss_pred hhhhhccccchHHhhc
Confidence 999987 666644
No 155
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=323.06 Aligned_cols=251 Identities=23% Similarity=0.292 Sum_probs=206.4
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCcc---chHHHHHHHHHHhccC-CCCcceEEeeeecCCceE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDKI---STGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 848 (1117)
....|.+.+.||+|.||.||++..+. |+.+|+|++.+.... ....+.+|+++|+++. |||||.+++++.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 45678899999999999999998654 999999999765432 3458899999999998 999999999999999999
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC----Ccceeccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER----YESCLADFGL 924 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~----~~~kl~DfGl 924 (1117)
+|||++.||.|.+.+... . +++..+..++.|++.|+.|||+. ||+|||+||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~---~-~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---H-YSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc---c-CCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999998776 2 89999999999999999999998 99999999999999643 4799999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKK 1004 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1117)
+...... ......+||+.|+|||++....|+..+||||+||++|.|++|..||.+.... ...........
T Consensus 186 a~~~~~~-----~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~-----~~~~~i~~~~~ 255 (382)
T KOG0032|consen 186 AKFIKPG-----ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF-----EIFLAILRGDF 255 (382)
T ss_pred ceEccCC-----ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh-----HHHHHHHcCCC
Confidence 9987651 2445679999999999999999999999999999999999999999753222 11223333332
Q ss_pred CCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1005 DPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1005 ~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+.... ...........+++. ++..||.+|+++.++++
T Consensus 256 ~f~~~----~w~~is~~akd~i~~------ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 DFTSE----PWDDISESAKDFIRK------LLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCC----CccccCHHHHHHHHH------hcccCcccCCCHHHHhc
Confidence 22222 222223445555554 88999999999999988
No 156
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.8e-34 Score=324.22 Aligned_cols=243 Identities=19% Similarity=0.284 Sum_probs=190.5
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||+||+|+. .+++.||+|+++... ....+.+.+|+.++.++ +||+|+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999975 467899999997542 22345678899999888 699999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|..++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---- 150 (327)
T cd05617 81 GDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---- 150 (327)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC----
Confidence 9999888654 2489999999999999999999999 99999999999999999999999999997532211
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCC-ChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPD-GQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......++........ ..++
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~p 223 (327)
T cd05617 151 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP-------IRIP 223 (327)
T ss_pred CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC-------CCCC
Confidence 1223457999999999999999999999999999999999999999643221 1112222222222211 1122
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMK 1047 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~ 1047 (1117)
...+....++++. |++.||++|+++.
T Consensus 224 ~~~~~~~~~li~~------~L~~dP~~R~~~~ 249 (327)
T cd05617 224 RFLSVKASHVLKG------FLNKDPKERLGCQ 249 (327)
T ss_pred CCCCHHHHHHHHH------HhccCHHHcCCCC
Confidence 2333445555554 9999999999853
No 157
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.2e-34 Score=319.92 Aligned_cols=259 Identities=27% Similarity=0.432 Sum_probs=200.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC-C--cEEEEEEeecC-CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS-G--LTVAVKRFRAS-DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 850 (1117)
++|++.+.||+|+||.||+|..++ + ..+|+|.++.. .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468889999999999999997543 3 35788888743 223345788999999999 799999999999999999999
Q ss_pred EEecCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcc
Q 001238 851 YDYMPNGTLGMLLHDGE-------------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYES 917 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~ 917 (1117)
|||+++++|.+++.... ..+.+++..+++++.|++.|++|||++ +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 99999999999986532 113488999999999999999999998 99999999999999999999
Q ss_pred eeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHH
Q 001238 918 CLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 918 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~ 996 (1117)
||+|||++...... ........+..|+|||++....++.++|||||||++|||++ |+.||.... .....
T Consensus 159 kl~dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-----~~~~~ 228 (297)
T cd05089 159 KIADFGLSRGEEVY-----VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-----CAELY 228 (297)
T ss_pred EECCcCCCccccce-----eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHH
Confidence 99999998643211 11111223567999999988889999999999999999997 999996431 11222
Q ss_pred HHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 001238 997 RDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEP 1060 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~ 1060 (1117)
....... .+..+...+..+.+++.. |++.+|.+||+++++++.|+.+....
T Consensus 229 ~~~~~~~-------~~~~~~~~~~~~~~li~~------~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 229 EKLPQGY-------RMEKPRNCDDEVYELMRQ------CWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HHHhcCC-------CCCCCCCCCHHHHHHHHH------HcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 2221111 111122233445555554 99999999999999999998887543
No 158
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.4e-34 Score=320.74 Aligned_cols=255 Identities=24% Similarity=0.370 Sum_probs=203.9
Q ss_pred hHHHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceE
Q 001238 770 SIGDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 770 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 848 (1117)
.+++...+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+++++.++||||+++++++......+
T Consensus 14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~ 93 (296)
T cd06654 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93 (296)
T ss_pred ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 3455667899999999999999999974 568999999998765555678899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+||||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++..
T Consensus 94 lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 94 VVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred EeecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 999999999999998653 378899999999999999999999 9999999999999999999999999998865
Q ss_pred cCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.... .......+++.|+|||.+....++.++|||||||++|||++|+.||....+. ..............
T Consensus 167 ~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~- 236 (296)
T cd06654 167 TPEQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----RALYLIATNGTPEL- 236 (296)
T ss_pred cccc----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-----HhHHHHhcCCCCCC-
Confidence 4321 1123446889999999998888999999999999999999999999643211 11111111111100
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+...+..+.+++ ..|+..+|++||++.++++
T Consensus 237 ----~~~~~~~~~l~~li------~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 237 ----QNPEKLSAIFRDFL------NRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ----CCccccCHHHHHHH------HHHCcCCcccCcCHHHHhh
Confidence 01112223344444 4499999999999999987
No 159
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.7e-34 Score=323.82 Aligned_cols=262 Identities=26% Similarity=0.355 Sum_probs=202.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC--------CCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP--------SGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRK 845 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 845 (1117)
.+|++.+.||+|+||.||+|... .+..||+|.++... ....+++.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 36889999999999999998632 12468999887532 22346789999999999 7999999999999999
Q ss_pred ceEEEEEecCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGE-------------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG 912 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~ 912 (1117)
..+++|||+++|+|.+++.... ....+++.++.+++.|+++||+|||++ +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 9999999999999999987532 123478899999999999999999999 999999999999999
Q ss_pred CCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChh
Q 001238 913 ERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQH 991 (1117)
Q Consensus 913 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~ 991 (1117)
+++.+||+|||+++....... ........++..|+|||++....++.++||||||+++|||++ |..||... .
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~ 241 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDY--YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-----P 241 (334)
T ss_pred CCCcEEECCcccceecccccc--cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC-----C
Confidence 999999999999986643211 111222334568999999998999999999999999999998 88998642 1
Q ss_pred HHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 001238 992 VIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEP 1060 (1117)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~ 1060 (1117)
..+......... . +..+......+..++ ..|++.+|++||++.++++.|+++....
T Consensus 242 ~~~~~~~~~~~~-~------~~~~~~~~~~l~~li------~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 242 VEELFKLLKEGH-R------MDKPANCTHELYMIM------RECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHHHcCC-C------CCCCCCCCHHHHHHH------HHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 222222221111 1 011122233344444 4499999999999999999999887543
No 160
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.3e-34 Score=317.60 Aligned_cols=245 Identities=22% Similarity=0.279 Sum_probs=190.9
Q ss_pred eeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 784 IGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
||+|+||+||+++. .+|+.||+|++.... ......+..|++++++++||||+++++++....+.++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999975 468999999986432 11233456799999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccC
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSAN 939 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 939 (1117)
.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-----~~ 151 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-----TI 151 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-----ee
Confidence 988865432 2388999999999999999999999 99999999999999999999999999998664321 12
Q ss_pred CccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 940 PQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
....|+..|+|||++....++.++||||+||++|||++|+.||..... ................ . ......+
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~------~-~~~~~~~ 223 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE-KVAKEELKRRTLEDEV------K-FEHQNFT 223 (277)
T ss_pred eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc-hhhHHHHHHHhhcccc------c-cccccCC
Confidence 234689999999999988899999999999999999999999964221 1112222222221110 0 0011234
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
....+++.. |++.||++||+++|+++
T Consensus 224 ~~~~~li~~------~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 224 EESKDICRL------FLAKKPEDRLGSREKND 249 (277)
T ss_pred HHHHHHHHH------HhccCHhhCCCCccchh
Confidence 455555555 99999999999977654
No 161
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.7e-34 Score=320.15 Aligned_cols=258 Identities=27% Similarity=0.405 Sum_probs=202.3
Q ss_pred cCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCce
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 847 (1117)
++|.+.+.||+|+||.||++.. ..+..||+|+++... ....+.+.+|+++++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 4688999999999999999863 235589999987543 22345789999999999 799999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++|+|.++++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.++++|||+++.
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999999976432 3389999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCC
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDP 1006 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1117)
...... ........++..|+|||.+....++.++||||+||++|||++ |..||..... ...... .......
T Consensus 191 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-~~~~~~----~~~~~~~- 262 (302)
T cd05055 191 IMNDSN--YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-DSKFYK----LIKEGYR- 262 (302)
T ss_pred ccCCCc--eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-hHHHHH----HHHcCCc-
Confidence 643221 112223456788999999998899999999999999999998 9999865321 111111 1111111
Q ss_pred ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1007 VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1007 ~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
+..+...+..+.++++ .|++.+|++||++.++++.|+++
T Consensus 263 -----~~~~~~~~~~~~~li~------~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 -----MAQPEHAPAEIYDIMK------TCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----CCCCCCCCHHHHHHHH------HHcCCCchhCcCHHHHHHHHHhh
Confidence 0111222334445444 49999999999999999999864
No 162
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.6e-33 Score=321.11 Aligned_cols=257 Identities=23% Similarity=0.310 Sum_probs=195.6
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||+||+++. .+++.||+|++... .....+.+.+|+.+++.++|+||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 3688899999999999999985 46899999998742 2223456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999997532 3488999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccCCccccccccCChhhhcc-----CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANM-----TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDP 1006 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1117)
.. .......||+.|+|||++.. ..++.++||||+||++|||++|+.||... ...+............
T Consensus 156 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~-----~~~~~~~~i~~~~~~~ 227 (331)
T cd05597 156 GT---VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKEHF 227 (331)
T ss_pred CC---ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC-----CHHHHHHHHHcCCCcc
Confidence 21 12223469999999999863 45788999999999999999999999642 2222222222211110
Q ss_pred ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1007 VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1007 ~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
. +.+. ....+...+.+++. +.|...++..||++.++++.
T Consensus 228 -~-~~~~-~~~~~~~~~~li~~----ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 228 -Q-FPPD-VTDVSEEAKDLIRR----LICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -c-CCCc-cCCCCHHHHHHHHH----HccCcccccCCCCHHHHhcC
Confidence 0 1111 11233445555543 12555555568899888774
No 163
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=305.31 Aligned_cols=247 Identities=22% Similarity=0.357 Sum_probs=202.1
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
-|.+.++||+|+||.||++.+ .+|..||||++... .+.+++..|+.+|++++.|++|++||.+.....+++|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 356678999999999999864 57999999998654 346789999999999999999999999888899999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
.|+..++++.+. .++.+.++..+.+..++||+|||.. .-+|||||+.|||+..+|.+|++|||.|..+.+.
T Consensus 112 AGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT---- 182 (502)
T KOG0574|consen 112 AGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT---- 182 (502)
T ss_pred CCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh----
Confidence 999999998654 4599999999999999999999998 8899999999999999999999999999887653
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCC-CCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKK-DPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 1014 (1117)
...+.+..||+-|||||++..-.|..++||||+|++..||..|++||.+..+. +..+.... .++....
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM--------RAIFMIPT~PPPTF~K--- 251 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM--------RAIFMIPTKPPPTFKK--- 251 (502)
T ss_pred HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc--------ceeEeccCCCCCCCCC---
Confidence 34566789999999999999999999999999999999999999999754331 11111111 1111111
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+..++....++++. |+-..|++|-|+-++.+
T Consensus 252 PE~WS~~F~DFi~~------CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 252 PEEWSSEFNDFIRS------CLIKKPEERKTALRLCE 282 (502)
T ss_pred hHhhhhHHHHHHHH------HhcCCHHHHHHHHHHhh
Confidence 12233344455554 99999999998877754
No 164
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.8e-34 Score=312.18 Aligned_cols=248 Identities=25% Similarity=0.357 Sum_probs=193.0
Q ss_pred CeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 782 NIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999754 68999999876432 23345789999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccC
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSAN 939 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 939 (1117)
.+++.... ..+++.+++.++.|+++||+|||++ +|+||||||+||+++.++.+|++|||+++....... ....
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~ 153 (252)
T cd05084 81 LTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY--ASTG 153 (252)
T ss_pred HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccc--cccC
Confidence 99987542 3488999999999999999999999 999999999999999999999999999976532110 0111
Q ss_pred CccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCC
Q 001238 940 PQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHP 1018 (1117)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1018 (1117)
.....+..|+|||.+....++.++||||||+++|||++ |..||..... .. .......... ...+...
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--~~----~~~~~~~~~~------~~~~~~~ 221 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--QQ----TREAIEQGVR------LPCPELC 221 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--HH----HHHHHHcCCC------CCCcccC
Confidence 11223567999999998899999999999999999998 8888864211 11 1111111111 1112222
Q ss_pred chhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1019 DTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1019 ~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
+..+.++++ .|++.+|++||++.++.++|+
T Consensus 222 ~~~~~~li~------~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLME------RCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHH------HHcCCChhhCcCHHHHHHHHh
Confidence 334444544 499999999999999999885
No 165
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.9e-34 Score=314.53 Aligned_cols=256 Identities=25% Similarity=0.415 Sum_probs=194.3
Q ss_pred CCCCCeeeecCCeEEEEEEcCC-Cc--EEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecC------Cc
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPS-GL--TVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANR------KT 846 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~ 846 (1117)
|.++++||+|+||.||+|...+ +. .||+|.++.. .....+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999998644 32 6999988654 233356788999999999999999999976432 24
Q ss_pred eEEEEEecCCCChhhhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDG---ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
.++||||+++|+|.+++... .....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999887432 1223488999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhc
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKS 1002 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~ 1002 (1117)
+++....... ........+++.|+|||+.....++.++||||||+++|||++ |+.||... ... +... ....
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~---~~~~-~~~~ 229 (272)
T cd05075 158 LSKKIYNGDY--YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV--ENS---EIYD-YLRQ 229 (272)
T ss_pred cccccCcccc--eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC--CHH---HHHH-HHHc
Confidence 9987643221 111223346778999999998999999999999999999999 88998642 111 1112 1222
Q ss_pred CCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1003 KKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1003 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
.... .........+.+++. .||+.+|++||++.++++.|+++
T Consensus 230 ~~~~------~~~~~~~~~~~~li~------~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GNRL------KQPPDCLDGLYSLMS------SCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC------CCCCCCCHHHHHHHH------HHcCCCcccCcCHHHHHHHHHhh
Confidence 1111 111223334444444 49999999999999999999864
No 166
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.3e-34 Score=316.08 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=197.8
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+|+.++++++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4789999999999999999985 568899999997655445567889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.++++.. +.+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||+++......
T Consensus 89 ~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 89 GGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 999999988754 3488999999999999999999999 99999999999999999999999999998664321
Q ss_pred ccccCCccccccccCChhhhc---cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 935 SFSANPQFAGSYGYIAPEYAN---MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.||....+... ..........+...
T Consensus 161 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~-- 231 (267)
T cd06646 161 --AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-----LFLMSKSNFQPPKL-- 231 (267)
T ss_pred --cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-----heeeecCCCCCCCC--
Confidence 1223456889999999874 34578899999999999999999999854221100 00000000000000
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
......+..+.++++ .|++.+|++||+++++++.
T Consensus 232 -~~~~~~~~~~~~li~------~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 232 -KDKTKWSSTFHNFVK------ISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred -ccccccCHHHHHHHH------HHhhCChhhCcCHHHHhcC
Confidence 001122334445444 4999999999999999864
No 167
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.3e-34 Score=311.87 Aligned_cols=247 Identities=26% Similarity=0.398 Sum_probs=193.5
Q ss_pred eeeecCCeEEEEEEc---CCCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCC
Q 001238 783 IIGQGRSGIVYKVTL---PSGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNG 857 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 857 (1117)
.||+|+||.||+|.+ +++..||+|+++.... ...+++.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999864 3578999999875432 23457889999999999999999999875 45678999999999
Q ss_pred ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccc
Q 001238 858 TLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFS 937 (1117)
Q Consensus 858 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 937 (1117)
+|.+++... +.+++..+.+++.|++.|++|+|++ +|+||||||+||++++++.+||+|||+++........ ..
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~-~~ 153 (257)
T cd05116 81 PLNKFLQKN---KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY-YK 153 (257)
T ss_pred cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCe-ee
Confidence 999998754 2488999999999999999999999 9999999999999999999999999999876543211 11
Q ss_pred cCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 938 ANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
......++..|+|||.+....++.++||||||+++|||++ |+.||.... .......+ ..... +..+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~i----~~~~~------~~~~~ 221 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--GNEVTQMI----ESGER------MECPQ 221 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHH----HCCCC------CCCCC
Confidence 1222344678999999988889999999999999999998 999996421 12222222 11111 11223
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
..+..+.++++. ||+.+|++||++++|++.|+.
T Consensus 222 ~~~~~l~~li~~------~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 222 RCPPEMYDLMKL------CWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCHHHHHHHHH------HhccCchhCcCHHHHHHHHhc
Confidence 334455555555 999999999999999999875
No 168
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7e-34 Score=320.71 Aligned_cols=262 Identities=26% Similarity=0.365 Sum_probs=204.0
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc--------CCCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecC
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL--------PSGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANR 844 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 844 (1117)
..+|++.+.||+|+||.||+|+. .++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 34688899999999999999863 134579999987532 23346789999999999 899999999999999
Q ss_pred CceEEEEEecCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEE
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGEC-------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILL 911 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill 911 (1117)
+..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||++ +|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 999999999999999999876421 12478889999999999999999999 99999999999999
Q ss_pred cCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCCh
Q 001238 912 GERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQ 990 (1117)
Q Consensus 912 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~ 990 (1117)
++++.+||+|||+++........ .......+++.|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~----- 243 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI----- 243 (304)
T ss_pred cCCCcEEECCCccceeccccccc--ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-----
Confidence 99999999999999876432211 11223346678999999988889999999999999999998 78888542
Q ss_pred hHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 991 HVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
...+.... ....... ..+...+..+..++.. ||+.+|++||++.++++.|+++...
T Consensus 244 ~~~~~~~~-~~~~~~~------~~~~~~~~~~~~li~~------cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 PVEELFKL-LKEGHRM------DKPANCTNELYMMMRD------CWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CHHHHHHH-HHcCCcC------CCCCCCCHHHHHHHHH------HcccChhhCCCHHHHHHHHHHHHHh
Confidence 12222222 2221111 1112233445555554 9999999999999999999987654
No 169
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.1e-33 Score=310.69 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=197.6
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeee-cCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGA-NRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lv~e~~ 854 (1117)
++|++.+.||+|+||.||++.. .|..||+|.++... ..+.+.+|++++++++|+|++++++++. ..+..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 4688889999999999999976 47889999986432 3567899999999999999999999754 456789999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.++++.... ..+++..+.+++.|++.||+|||++ +|+||||||+||++++++.+|++|||+++......
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 83 AKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999999876432 3488999999999999999999999 99999999999999999999999999988654321
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
....++..|+|||++....++.++||||||+++|||++ |+.||... ...+......... . +.
T Consensus 157 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~-~------~~ 219 (256)
T cd05082 157 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGY-K------MD 219 (256)
T ss_pred -----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCC-C------CC
Confidence 12244678999999998899999999999999999998 99998642 1222222211111 1 11
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
.....+..+.+++.. |++.+|++||++.++++.|+++
T Consensus 220 ~~~~~~~~~~~li~~------~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 220 APDGCPPVVYDVMKQ------CWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCCCCHHHHHHHHH------HhcCChhhCcCHHHHHHHHhcC
Confidence 222333445555544 9999999999999999998753
No 170
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.8e-34 Score=338.49 Aligned_cols=197 Identities=24% Similarity=0.340 Sum_probs=161.8
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecC--------C
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANR--------K 845 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~ 845 (1117)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 46799999999999999999975 468899999886432 2346799999999999999999876432 2
Q ss_pred ceEEEEEecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC-cceecccc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY-ESCLADFG 923 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfG 923 (1117)
..++||||+++ ++.+++... .....+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccc
Confidence 35689999975 666655431 2234589999999999999999999999 999999999999999665 79999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+|+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+
T Consensus 217 la~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 273 (440)
T PTZ00036 217 SAKNLLAGQ-----RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG 273 (440)
T ss_pred cchhccCCC-----CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 998764321 2234578999999998865 4689999999999999999999999965
No 171
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.9e-34 Score=316.85 Aligned_cols=261 Identities=21% Similarity=0.316 Sum_probs=203.6
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcCC-----CcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeec-CCce
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLPS-----GLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGAN-RKTK 847 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~ 847 (1117)
.++|++.+.||+|+||.||+|.+.+ +..||+|+++... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4578889999999999999998655 6889999887542 2334568899999999999999999998766 4678
Q ss_pred EEEEEecCCCChhhhhcCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECA-----GLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADF 922 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 922 (1117)
++++||+++|+|.+++...... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+|++||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998764322 3589999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHh
Q 001238 923 GLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLK 1001 (1117)
Q Consensus 923 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 1001 (1117)
|+++.+...... .......++..|+|||++....++.++||||||+++||+++ |+.||.... ..++.. ...
T Consensus 162 g~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~-~~~ 233 (280)
T cd05043 162 ALSRDLFPMDYH--CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID-----PFEMAA-YLK 233 (280)
T ss_pred CCcccccCCceE--EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC-----HHHHHH-HHH
Confidence 999866432211 11123346778999999988889999999999999999999 999996421 112221 122
Q ss_pred cCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1002 SKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1002 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
...... .....+..+.+++. .||+.+|++||++.++++.|+.+.+
T Consensus 234 ~~~~~~------~~~~~~~~~~~li~------~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 234 DGYRLA------QPINCPDELFAVMA------CCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred cCCCCC------CCCcCCHHHHHHHH------HHcCCChhhCCCHHHHHHHHHHHHh
Confidence 211111 11122334444444 4999999999999999999998764
No 172
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-35 Score=329.86 Aligned_cols=256 Identities=26% Similarity=0.422 Sum_probs=202.1
Q ss_pred CCCCCeeeecCCeEEEEEEc-CCC----cEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 778 LTAGNIIGQGRSGIVYKVTL-PSG----LTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.+..++||+|+||+||+|.| +.| -+||||++... .....+++.+|+.+|.+++|||++|++++|.... ..+|.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 45568899999999999864 344 46899988654 3445678999999999999999999999998766 78999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
+||+.|+|.++++.++ +.+-....+.|..|||+||.|||++ ++|||||..+||||..-..+|+.|||+++....+
T Consensus 777 q~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 9999999999999864 4478889999999999999999999 9999999999999999999999999999988765
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.... ........+.|||-|.+....|+.++|||||||++||++| |..||++.. .+.+.+.++....
T Consensus 852 ~~ey--~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~------~~eI~dlle~geR----- 918 (1177)
T KOG1025|consen 852 EKEY--SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP------AEEIPDLLEKGER----- 918 (1177)
T ss_pred cccc--cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC------HHHhhHHHhcccc-----
Confidence 4322 1122234578999999999999999999999999999999 999997632 2223333333321
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
++..+.-. +.+..++.+||..|++.||+++++.+.+.++.+.
T Consensus 919 ---LsqPpiCt----iDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 919 ---LSQPPICT----IDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ---CCCCCCcc----HHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 11111111 1122244559999999999999999998877554
No 173
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7e-34 Score=322.92 Aligned_cols=241 Identities=19% Similarity=0.255 Sum_probs=190.1
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 851 (1117)
+|...+.||+|+||+||+|.. .+|+.||+|+++... ....+.+..|.++++.+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 366778999999999999975 468999999987532 223456778899988885 578889999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++... +.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV---GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 999999999988754 3489999999999999999999999 9999999999999999999999999999754322
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .............
T Consensus 155 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~i~~~~~------- 218 (323)
T cd05615 155 G----VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-----EDELFQSIMEHNV------- 218 (323)
T ss_pred C----ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC-------
Confidence 1 12234569999999999998999999999999999999999999996531 1222222222211
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTM 1046 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~ 1046 (1117)
.++...+....+++. .|++.+|.+|++.
T Consensus 219 -~~p~~~~~~~~~li~------~~l~~~p~~R~~~ 246 (323)
T cd05615 219 -SYPKSLSKEAVSICK------GLMTKHPSKRLGC 246 (323)
T ss_pred -CCCccCCHHHHHHHH------HHcccCHhhCCCC
Confidence 112223334444444 4999999999974
No 174
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.3e-33 Score=310.89 Aligned_cols=253 Identities=27% Similarity=0.468 Sum_probs=199.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|.+.+.||+|+||.||+|....+..||+|++.... ...+.+.+|++++++++|||++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 3578889999999999999988777789999886543 33567899999999999999999999875 456899999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|+|.++++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++.......
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05069 84 KGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc--
Confidence 999999997643 23478999999999999999999998 999999999999999999999999999987643211
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......++..|+|||......++.++||||||+++|||++ |+.||.... ......++ ...... ..
T Consensus 158 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~----~~~~~~------~~ 224 (260)
T cd05069 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVLEQV----ERGYRM------PC 224 (260)
T ss_pred -cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHH----HcCCCC------CC
Confidence 12223346778999999988899999999999999999999 999986421 11111211 111111 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
+...+..+.++++. |++.+|++||++++|.+.|++
T Consensus 225 ~~~~~~~~~~li~~------~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQGCPESLHELMKL------CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CcccCHHHHHHHHH------HccCCcccCcCHHHHHHHHhc
Confidence 12233345555544 999999999999999999875
No 175
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8e-34 Score=345.87 Aligned_cols=254 Identities=22% Similarity=0.345 Sum_probs=194.0
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeec--CCceEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGAN--RKTKLL 849 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~l 849 (1117)
.++|++.+.||+|+||+||+|... ++..||+|++... .......|..|+.++++++|||||++++++.+ ....|+
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 457999999999999999999754 5778999998753 22334678899999999999999999998754 356899
Q ss_pred EEEecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCC----CceeeeccccCeEEEcC-----------
Q 001238 850 FYDYMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCV----PAILHRDVKSHNILLGE----------- 913 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~ivHrDlkp~Nill~~----------- 913 (1117)
||||+++|+|.+++.... ..+.+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 999999999999987532 22458999999999999999999998521 25999999999999964
Q ss_pred ------CCcceeccccccccccCCCCCccccCCccccccccCChhhhcc--CCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 914 ------RYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM--TKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 914 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
.+.+||+|||+++...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s-----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIES-----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccCCCCceEEccCCccccccccc-----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 2358999999998664321 2234579999999998854 45889999999999999999999999642
Q ss_pred CCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 986 FPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
......+.. +...... .. ...+..+..++.. ||+.+|++||++.++++
T Consensus 247 ----~~~~qli~~-lk~~p~l------pi-~~~S~eL~dLI~~------~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 ----NNFSQLISE-LKRGPDL------PI-KGKSKELNILIKN------LLNLSAKERPSALQCLG 294 (1021)
T ss_pred ----CcHHHHHHH-HhcCCCC------Cc-CCCCHHHHHHHHH------HhcCChhHCcCHHHHhc
Confidence 122222222 2222111 01 1123345555554 99999999999999985
No 176
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.1e-33 Score=316.60 Aligned_cols=260 Identities=22% Similarity=0.347 Sum_probs=200.5
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCce
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 847 (1117)
.++|++.++||+|+||.||+|..+ .+..||+|.+..... ....++.+|+.++++++||||+++++++.+.+..
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 457899999999999999998643 245899998864432 2234678899999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceec
Q 001238 848 LLFYDYMPNGTLGMLLHDGEC-------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLA 920 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 920 (1117)
++||||+++|+|.+++..... ....++..+.+++.|++.||+|||++ +|+||||||+||++++++.++++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 999999999999999975321 12356788899999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHH
Q 001238 921 DFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDH 999 (1117)
Q Consensus 921 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~ 999 (1117)
|||+++....... ........++..|+|||.+....++.++|||||||++|||++ |+.||.... ..+.....
T Consensus 162 Dfg~~~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~-----~~~~~~~~ 234 (288)
T cd05061 162 DFGMTRDIYETDY--YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-----NEQVLKFV 234 (288)
T ss_pred cCCcccccccccc--ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH
Confidence 9999986543211 112223345678999999998899999999999999999999 788986421 11222222
Q ss_pred HhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1000 LKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1000 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
..... +..+...+..+.+++. .|++.+|++||++.++++.+++..
T Consensus 235 ~~~~~-------~~~~~~~~~~~~~li~------~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 235 MDGGY-------LDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HcCCC-------CCCCCCCCHHHHHHHH------HHcCCChhHCcCHHHHHHHHHhhc
Confidence 21111 1111222334555554 499999999999999999988753
No 177
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=317.06 Aligned_cols=243 Identities=27% Similarity=0.372 Sum_probs=194.6
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCcc---chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKI---STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
.|.-.+.||.|+||.||-|+. .+.+.||||++.-..++ .+..+..|++.+++++|||+|.+.|+|-.+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 455567799999999999974 46789999999755433 35578899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|| -|+-.|++.-.+ .++.+.++..|..+.+.||+|||++ +.||||||+.|||+++.|.||++|||.|....
T Consensus 107 YC-lGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~--- 177 (948)
T KOG0577|consen 107 YC-LGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMA--- 177 (948)
T ss_pred HH-hccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcC---
Confidence 99 467777765443 3488899999999999999999999 99999999999999999999999999997654
Q ss_pred CCccccCCccccccccCChhhhc---cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYAN---MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
+...++|||.|||||++. .+.|+-|+||||+|++..|+...++|+-.. ..+ ..+-.+.+...
T Consensus 178 -----PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM----NAM-SALYHIAQNes----- 242 (948)
T KOG0577|consen 178 -----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM----NAM-SALYHIAQNES----- 242 (948)
T ss_pred -----chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc----hHH-HHHHHHHhcCC-----
Confidence 344689999999999874 578999999999999999999999997432 111 11111112221
Q ss_pred cCccc-CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1010 LDPKL-QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1010 ~~~~l-~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
|.+ .+.++..+..++.. |++.-|.+|||..+++.
T Consensus 243 --PtLqs~eWS~~F~~Fvd~------CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 243 --PTLQSNEWSDYFRNFVDS------CLQKIPQERPTSEELLK 277 (948)
T ss_pred --CCCCCchhHHHHHHHHHH------HHhhCcccCCcHHHHhh
Confidence 112 34555566666665 99999999999887644
No 178
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.2e-34 Score=321.03 Aligned_cols=261 Identities=26% Similarity=0.362 Sum_probs=201.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC--------CCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP--------SGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRK 845 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 845 (1117)
++|.+.+.||+|+||.||+|... ++..||+|.++... .....++.+|+++++++ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46899999999999999998642 23579999987542 22345688899999999 7999999999999999
Q ss_pred ceEEEEEecCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGEC-------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG 912 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~ 912 (1117)
..++||||+++|+|.+++..... ...+++.++++++.|++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 99999999999999999976421 12488999999999999999999998 999999999999999
Q ss_pred CCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChh
Q 001238 913 ERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQH 991 (1117)
Q Consensus 913 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~ 991 (1117)
+++.+||+|||.++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||... .
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-----~ 247 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDY--YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----P 247 (307)
T ss_pred CCCcEEECCCcccccccccch--hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-----C
Confidence 999999999999976543211 111112234578999999988889999999999999999998 88888542 1
Q ss_pred HHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 992 VIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
..+... ....... ...+...+..+..++. .|++.+|++||++.+|++.|+++...
T Consensus 248 ~~~~~~-~~~~~~~------~~~~~~~~~~~~~li~------~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 VEELFK-LLKEGHR------MDKPSNCTNELYMMMR------DCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHH-HHHcCCC------CCCCCcCCHHHHHHHH------HHcccChhhCcCHHHHHHHHHHHHHH
Confidence 112221 1221111 1112222334444444 49999999999999999999988654
No 179
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.7e-33 Score=309.31 Aligned_cols=249 Identities=23% Similarity=0.388 Sum_probs=192.2
Q ss_pred eeeecCCeEEEEEEcC---CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCC
Q 001238 783 IIGQGRSGIVYKVTLP---SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGT 858 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 858 (1117)
.||+|+||.||+|.+. .+..||+|++..... ...+.+.+|++++++++||||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999998653 356799999875432 23456899999999999999999999875 457899999999999
Q ss_pred hhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcccc
Q 001238 859 LGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSA 938 (1117)
Q Consensus 859 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 938 (1117)
|.+++.... ..+++.++.+++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++........ ...
T Consensus 81 L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~ 154 (257)
T cd05115 81 LNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY-YKA 154 (257)
T ss_pred HHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccc-eec
Confidence 999987542 3489999999999999999999999 9999999999999999999999999999865433211 111
Q ss_pred CCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCC
Q 001238 939 NPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGH 1017 (1117)
Q Consensus 939 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1017 (1117)
.....++..|+|||++....++.++||||||+++||+++ |+.||.... .. ...... ..... +..+..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~---~~~~~~-~~~~~------~~~~~~ 222 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--GP---EVMSFI-EQGKR------LDCPAE 222 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--HH---HHHHHH-HCCCC------CCCCCC
Confidence 222234678999999988889999999999999999996 999996431 11 222221 11111 111222
Q ss_pred CchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1018 PDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1018 ~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
.+..+.+++.. ||..+|++||++.+|.+.|+.+
T Consensus 223 ~~~~l~~li~~------c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYALMKD------CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHHHHHH------HcCCChhhCcCHHHHHHHHhhh
Confidence 23344554444 9999999999999999998764
No 180
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.2e-33 Score=310.38 Aligned_cols=249 Identities=27% Similarity=0.398 Sum_probs=200.7
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||+|... +++.||+|.+... .....+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3677889999999999999754 6899999998643 233456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++.... ...+++..+++++.|++.||.|||+. +|+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~- 155 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT- 155 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc-
Confidence 99999999997642 23588999999999999999999998 99999999999999999999999999998765422
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.......|++.|+|||+.....++.++||||||+++|||++|+.||.... ............. +.
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-------~~ 220 (256)
T cd08529 156 ---NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN-----QGALILKIIRGVF-------PP 220 (256)
T ss_pred ---chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCC-------CC
Confidence 12233468899999999998899999999999999999999999996431 1122222222111 11
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+....+..+.++++. |++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~------~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 221 VSQMYSQQLAQLIDQ------CLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CccccCHHHHHHHHH------HccCCcccCcCHHHHhh
Confidence 222333445555554 99999999999999976
No 181
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.8e-33 Score=314.14 Aligned_cols=263 Identities=23% Similarity=0.379 Sum_probs=200.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-----CCCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecC--Cce
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-----PSGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 847 (1117)
+.|++.+.||+|+||.||.++. .+++.||+|.++... ....+++.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4578899999999999999863 357899999987543 33346789999999999999999999988775 567
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccc
Confidence 89999999999999986542 2489999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCC---------CChhHHHHHHH
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFP---------DGQHVIQWVRD 998 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~---------~~~~~~~~~~~ 998 (1117)
....... ........++..|+|||++.+..++.++||||||+++|||++++.|+..... .+.........
T Consensus 159 ~~~~~~~-~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 159 IETDKEY-YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred cccCccc-eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 6543211 1122345577789999999888899999999999999999998876532110 01111111111
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
....... .......+..+.+++. .|++.+|++||++.++++.++++
T Consensus 238 ~~~~~~~------~~~~~~~~~~~~~li~------~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGKR------LPRPPNCPEEVYQLMR------KCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCcc------CCCCCCCCHHHHHHHH------HHccCCcccCcCHHHHHHHHHhh
Confidence 1111111 0111223334455444 49999999999999999999875
No 182
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.5e-33 Score=314.70 Aligned_cols=250 Identities=20% Similarity=0.270 Sum_probs=194.8
Q ss_pred CCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 778 LTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
|+..+.||+|+||+||+|.. .+++.||+|++.... ......+.+|++++++++|++|+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66678899999999999875 468999999986542 12234577899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999988865432 3489999999999999999999999 99999999999999999999999999997653221
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
......|+..|+|||++.+..++.++|+||||+++|||++|+.||..... ......+........ ..
T Consensus 157 ----~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~--~~~~~~~~~~~~~~~-------~~ 223 (285)
T cd05632 157 ----SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE--KVKREEVDRRVLETE-------EV 223 (285)
T ss_pred ----cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhhhccc-------cc
Confidence 12244789999999999888999999999999999999999999964211 111111211111110 11
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCC-----HHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPT-----MKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs-----~~~v~~ 1051 (1117)
+....+..+.+++. .|++.+|++||+ +.++++
T Consensus 224 ~~~~~~~~~~~li~------~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 224 YSAKFSEEAKSICK------MLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cCccCCHHHHHHHH------HHccCCHhHcCCCcccChHHHHc
Confidence 22223334444444 499999999999 566655
No 183
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=9.2e-34 Score=315.23 Aligned_cols=257 Identities=26% Similarity=0.374 Sum_probs=198.4
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCce
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 847 (1117)
+++|++.+.||+|+||.||+|.+. .+..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 457889999999999999999764 35689999886443 22345688999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCCC----CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC---cceec
Q 001238 848 LLFYDYMPNGTLGMLLHDGEC----AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY---ESCLA 920 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~---~~kl~ 920 (1117)
++||||+++++|.+++..... ...+++..+.+++.||+.|++|||++ +++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 999999999999999876431 12489999999999999999999999 999999999999998754 58999
Q ss_pred cccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHH
Q 001238 921 DFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDH 999 (1117)
Q Consensus 921 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~ 999 (1117)
|||+++....... .........+..|+|||++.+..++.++|||||||++|||++ |+.||..... ... +..
T Consensus 162 dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--~~~---~~~- 233 (277)
T cd05036 162 DFGMARDIYRASY--YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--QEV---MEF- 233 (277)
T ss_pred cCccccccCCccc--eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHH---HHH-
Confidence 9999987632211 111122234568999999998899999999999999999997 9999964211 122 211
Q ss_pred HhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1000 LKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1000 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
....... ..+...+..+.+++. .|++.+|++||++.+|++.|+
T Consensus 234 ~~~~~~~------~~~~~~~~~~~~~i~------~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTGGGRL------DPPKGCPGPVYRIMT------DCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHcCCcC------CCCCCCCHHHHHHHH------HHcCCCcccCcCHHHHHHHhh
Confidence 1111111 112223334444444 499999999999999999875
No 184
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.1e-33 Score=313.06 Aligned_cols=252 Identities=26% Similarity=0.368 Sum_probs=188.5
Q ss_pred eeeecCCeEEEEEEcCC---CcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCC
Q 001238 783 IIGQGRSGIVYKVTLPS---GLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGT 858 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 858 (1117)
.||+|+||+||+|...+ ...||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999996433 3578888776432 2234568889999999999999999999999999999999999999
Q ss_pred hhhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 859 LGMLLHDGEC--AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 859 L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|.+++..... ....++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++...... ..
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~--~~ 156 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED--YY 156 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccch--he
Confidence 9999876432 22356788899999999999999999 99999999999999999999999999987543321 11
Q ss_pred ccCCccccccccCChhhhcc-------CCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 937 SANPQFAGSYGYIAPEYANM-------TKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.......++..|+|||+... ..++.++|||||||++|||++ |..||..... .+......... ...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~--~~~ 229 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-----EQVLKQVVREQ--DIK 229 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHhhcc--Ccc
Confidence 12233456778999998753 356789999999999999999 7888864211 11122222211 112
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
...+.+....+..+.+++.. || .||++||++++|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~------~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 230 LPKPQLDLKYSDRWYEVMQF------CW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCCCcccccCCHHHHHHHHH------Hh-cCcccccCHHHHHHHh
Confidence 22233333444445555544 88 4999999999999886
No 185
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1e-33 Score=314.91 Aligned_cols=256 Identities=24% Similarity=0.392 Sum_probs=201.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 848 (1117)
++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+++++.++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 46888999999999999998753 24689999986543 223456889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecc
Q 001238 849 LFYDYMPNGTLGMLLHDGEC-------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLAD 921 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~D 921 (1117)
+||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECC
Confidence 99999999999999865321 23478899999999999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHH
Q 001238 922 FGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHL 1000 (1117)
Q Consensus 922 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 1000 (1117)
||+++....... ........++..|+|||.+....++.++|||||||++||+++ |+.||... ........+
T Consensus 163 fg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~~~~---- 234 (277)
T cd05032 163 FGMTRDIYETDY--YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL--SNEEVLKFV---- 234 (277)
T ss_pred cccchhhccCcc--cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC--CHHHHHHHH----
Confidence 999986643221 112233456789999999988889999999999999999998 99998642 112222222
Q ss_pred hcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1001 KSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1001 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
..... +..+...+..+.+++.. |++.+|++||++.++++.|+
T Consensus 235 ~~~~~------~~~~~~~~~~~~~li~~------~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 IDGGH------LDLPENCPDKLLELMRM------CWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred hcCCC------CCCCCCCCHHHHHHHHH------HcCCChhhCCCHHHHHHHhc
Confidence 11111 11222334445555544 99999999999999999875
No 186
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-33 Score=312.66 Aligned_cols=254 Identities=25% Similarity=0.364 Sum_probs=190.3
Q ss_pred CeeeecCCeEEEEEEcCC---CcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCC
Q 001238 782 NIIGQGRSGIVYKVTLPS---GLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNG 857 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 857 (1117)
+.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999997543 46799998875432 23357888999999999999999999999999999999999999
Q ss_pred ChhhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 858 TLGMLLHDGEC--AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 858 sL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|.+++..... ....++..+..++.|+++|++|||+. +++||||||+||+++.++.+|++|||+++...... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~--~ 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED--Y 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcc--e
Confidence 99999875321 22367788889999999999999999 99999999999999999999999999997543221 1
Q ss_pred cccCCccccccccCChhhhccC-------CCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 936 FSANPQFAGSYGYIAPEYANMT-------KISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
........++..|+|||++... .++.++||||||+++|||++ |+.||..... ...... .... ...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~~---~~~~--~~~ 228 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD--EQVLTY---TVRE--QQL 228 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh--HHHHHH---Hhhc--ccC
Confidence 1222344678899999988642 35789999999999999996 9999964321 111111 1111 111
Q ss_pred cccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1008 EVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1008 ~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
....+.+.......+..+++. || .+|++||++++|++.|+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~------c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKLPLSDRWYEVMQF------CW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCCCCChHHHHHHHH------Hh-cCcccCCCHHHHHHHhc
Confidence 122233333333444555554 88 58999999999998764
No 187
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.3e-33 Score=317.98 Aligned_cols=259 Identities=29% Similarity=0.441 Sum_probs=198.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCc--EEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGL--TVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 850 (1117)
++|++.+.||+|+||.||+|.+. ++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46888899999999999999854 454 46777766432 23345788999999999 899999999999999999999
Q ss_pred EEecCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcc
Q 001238 851 YDYMPNGTLGMLLHDGEC-------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYES 917 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~ 917 (1117)
|||+++|+|.++++.... ...+++.+++.++.|++.|++|||++ +|+||||||+||++++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999875321 23478999999999999999999999 99999999999999999999
Q ss_pred eeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHH
Q 001238 918 CLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 918 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~ 996 (1117)
||+|||+++..... .......++..|+|||++....++.++|||||||++|||++ |..||..... .+..
T Consensus 164 kl~dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~ 233 (303)
T cd05088 164 KIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELY 233 (303)
T ss_pred EeCccccCcccchh-----hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-----HHHH
Confidence 99999998643211 11112234678999999988889999999999999999998 9999964211 1111
Q ss_pred HHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 001238 997 RDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEP 1060 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~ 1060 (1117)
.. ...... ...+...+..+.++ +..|++.+|++||++.++++.++++....
T Consensus 234 ~~-~~~~~~------~~~~~~~~~~~~~l------i~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 234 EK-LPQGYR------LEKPLNCDDEVYDL------MRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred HH-HhcCCc------CCCCCCCCHHHHHH------HHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11 111100 11111222334444 44599999999999999999998875543
No 188
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.7e-33 Score=310.14 Aligned_cols=255 Identities=30% Similarity=0.492 Sum_probs=203.7
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.++|++.++||+|+||.||+|..++++.||||.+.... ...+++.+|++++++++||||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 35788999999999999999988788899999987543 34578999999999999999999999999889999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++.... ...+++.++..++.|++.|++|||++ +++||||||+||++++++.++++|||.++......
T Consensus 84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (261)
T cd05034 84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-- 157 (261)
T ss_pred CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchh--
Confidence 9999999997653 23489999999999999999999999 99999999999999999999999999998764311
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
........++..|+|||.+.+..++.++||||+|+++||+++ |+.||.+.. .. ............ .
T Consensus 158 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~---~~~~~~~~~~~~-------~ 224 (261)
T cd05034 158 -YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--NR---EVLEQVERGYRM-------P 224 (261)
T ss_pred -hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HH---HHHHHHHcCCCC-------C
Confidence 111222335678999999998899999999999999999998 999996421 11 222222211110 0
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
.+...+..+.+++. .|++.+|++||+++++.+.|+.
T Consensus 225 ~~~~~~~~~~~~i~------~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 225 RPPNCPEELYDLML------QCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCHHHHHHHH------HHcccCcccCCCHHHHHHHHhc
Confidence 11112334444444 4999999999999999998875
No 189
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.4e-33 Score=312.16 Aligned_cols=257 Identities=28% Similarity=0.472 Sum_probs=199.8
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CC---cEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SG---LTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++|+..+.||+|+||.||+|..+ ++ ..||+|+++... ....+.+..|++++++++||||+++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46778899999999999999864 23 379999987542 33356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++++|.+++.... +.+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 85 TEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 99999999999987643 4489999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
..... ........+..|+|||++....++.++|||||||++|||++ |+.||.... .. ............
T Consensus 160 ~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--~~---~~~~~i~~~~~~---- 229 (268)
T cd05063 160 DPEGT-YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--NH---EVMKAINDGFRL---- 229 (268)
T ss_pred ccccc-eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--HH---HHHHHHhcCCCC----
Confidence 22111 11112233567999999998899999999999999999998 999996421 11 222222111111
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
+. ....+..+.+ ++..|++.+|++||++.+|++.|+++
T Consensus 230 --~~-~~~~~~~~~~------li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 --PA-PMDCPSAVYQ------LMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --CC-CCCCCHHHHH------HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11 1112223333 44559999999999999999999875
No 190
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.5e-33 Score=313.88 Aligned_cols=259 Identities=24% Similarity=0.373 Sum_probs=200.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCc----EEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGL----TVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
++|++.++||+|+||+||+|.+ .+|+ .||+|+++... ......+.+|+.+++.+.||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 4688889999999999999974 3444 58999987543 2334578899999999999999999998875 45789
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
+|||+++|+|.+++.... +.+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++...
T Consensus 86 ~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 999999999999987643 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
..... .......+++.|+|||......++.++|||||||++|||++ |..||+... ......++. ......
T Consensus 161 ~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~----~~~~~~- 231 (279)
T cd05109 161 IDETE--YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--AREIPDLLE----KGERLP- 231 (279)
T ss_pred cccce--eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH----CCCcCC-
Confidence 32211 11122345678999999988899999999999999999998 999986421 112222222 211110
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEP 1060 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~ 1060 (1117)
.+...+..+.+ ++..||+.||++||++.++++.++++...+
T Consensus 232 -----~~~~~~~~~~~------li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 232 -----QPPICTIDVYM------IMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -----CCccCCHHHHH------HHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11122233444 444599999999999999999998887654
No 191
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.6e-33 Score=311.61 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=200.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC----CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP----SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
.+|++.+.||+|+||.||+|... .+..||+|.++... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888999999999999999753 23479999886542 22345789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++++|.+++.... +.+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999997643 3489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
..... .......++..|+|||++....++.++||||||+++||+++ |+.||..... ......+ . .....
T Consensus 159 ~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~~~~~~---~-~~~~~--- 228 (267)
T cd05066 159 DPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QDVIKAI---E-EGYRL--- 228 (267)
T ss_pred cccee-eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HHHHHHH---h-CCCcC---
Confidence 32111 11122234568999999998899999999999999999887 9999964211 1122211 1 11111
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
......+..+.+++. .|++.+|++||++.++++.|+++
T Consensus 229 ---~~~~~~~~~~~~li~------~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 ---PAPMDCPAALHQLML------DCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ---CCCCCCCHHHHHHHH------HHcccCchhCCCHHHHHHHHHhh
Confidence 111222334444444 49999999999999999999864
No 192
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.5e-33 Score=309.90 Aligned_cols=250 Identities=25% Similarity=0.407 Sum_probs=197.2
Q ss_pred CeeeecCCeEEEEEEcCC--C--cEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLPS--G--LTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||.||+|.+.+ + ..||||.+..... ...+++.+|++++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999997543 3 3699999986654 456689999999999999999999999888 888999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
++|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++........ .
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~ 154 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH-Y 154 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc-e
Confidence 999999977542 4589999999999999999999999 9999999999999999999999999999877543221 1
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......++..|+|||++....++.++||||||+++|||++ |+.||... ...+............ ..+
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-----~~~~~~~~~~~~~~~~------~~~ 223 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL-----SGSQILKKIDKEGERL------ERP 223 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhcCCcC------CCC
Confidence 12223457889999999998999999999999999999998 99999642 1112222222111100 111
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
...+..+.+++. .|++.+|++||++.++++.|.
T Consensus 224 ~~~~~~~~~li~------~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACPQDIYNVML------QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCCHHHHHHHH------HHCCCCcccCCCHHHHHHHhc
Confidence 222334455444 499999999999999999874
No 193
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-34 Score=290.20 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=199.2
Q ss_pred hccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCc----cc----hHHHHHHHHHHhcc-CCCCcceEEeeeec
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDK----IS----TGAFSSEIATLSRI-RHRNIVRLLGWGAN 843 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~----~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 843 (1117)
..+.|...+.+|.|..++|.+.. .++|..+|+|++..... .. .++-.+|+.+++++ .||+|+.+.++++.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 34567888999999999998864 55788999999864311 11 13346799999998 79999999999999
Q ss_pred CCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 844 RKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 844 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
+...++|+|.|+.|.|.|++.... .+++...++|++|+.+|++|||.. .|||||+||+|||+|++.++||+|||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccc
Confidence 999999999999999999998753 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhcc------CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHH
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANM------TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVR 997 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~ 997 (1117)
.|+.+..+. .....+|||+|+|||.+.. ..|+..+|+||+||++|.++.|.+||-- ..-.-+++
T Consensus 169 Fa~~l~~Ge-----kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH-----RkQmlMLR 238 (411)
T KOG0599|consen 169 FACQLEPGE-----KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH-----RKQMLMLR 238 (411)
T ss_pred eeeccCCch-----hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH-----HHHHHHHH
Confidence 999887542 3346799999999998754 4688899999999999999999999942 11112223
Q ss_pred HHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 998 DHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 998 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.++.++..... |. ....+.....++.. |++.||.+|-|++|.++
T Consensus 239 ~ImeGkyqF~s---pe-Wadis~~~KdLIsr------lLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 239 MIMEGKYQFRS---PE-WADISATVKDLISR------LLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHhcccccCC---cc-hhhccccHHHHHHH------HHeeCchhcccHHHHhc
Confidence 33333322211 11 11223344555554 99999999999999987
No 194
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.8e-34 Score=324.99 Aligned_cols=261 Identities=26% Similarity=0.380 Sum_probs=198.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEc------CCCcEEEEEEeecCCc-cchHHHHHHHHHHhcc-CCCCcceEEeeeecC-Cc
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL------PSGLTVAVKRFRASDK-ISTGAFSSEIATLSRI-RHRNIVRLLGWGANR-KT 846 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~~ 846 (1117)
++|++.+.||+|+||+||+|.+ .+++.||||+++.... .....+.+|++++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4799999999999999999863 3578999999975432 2345688899999999 689999999987654 45
Q ss_pred eEEEEEecCCCChhhhhcCCCC----------------------------------------------------------
Q 001238 847 KLLFYDYMPNGTLGMLLHDGEC---------------------------------------------------------- 868 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 868 (1117)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999998864210
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCcc
Q 001238 869 ------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQF 942 (1117)
Q Consensus 869 ------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 942 (1117)
...+++.++.+++.|+++||+|||++ +|+||||||+||++++++.+||+|||+++....... .......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~ 241 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKGDA 241 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcc--hhhcCCC
Confidence 12367888999999999999999999 999999999999999999999999999987543211 1112233
Q ss_pred ccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchh
Q 001238 943 AGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQ 1021 (1117)
Q Consensus 943 ~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1021 (1117)
.++..|+|||.+....++.++||||||+++|||++ |..||...... .. ........... ..+...+..
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~----~~~~~~~~~~~------~~~~~~~~~ 310 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EE----FCRRLKEGTRM------RAPDYTTPE 310 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HH----HHHHHhccCCC------CCCCCCCHH
Confidence 45678999999988899999999999999999997 99998643211 11 11112111110 111112222
Q ss_pred HHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1022 IQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1022 ~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
+. .++..||+.+|++||++.+|++.|+.+.+
T Consensus 311 ~~------~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 311 MY------QTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HH------HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22 34556999999999999999999998765
No 195
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1e-33 Score=315.09 Aligned_cols=247 Identities=24% Similarity=0.372 Sum_probs=194.4
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+|++.++||+|+||.||+|.. .+++.||+|++.... .....++.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577889999999999999974 568899999987542 223456889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--- 148 (279)
T cd06619 82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--- 148 (279)
T ss_pred CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence 999996542 267888999999999999999999 9999999999999999999999999999865432
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChh--HHHHHHHHHhcCCCCccccCc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQH--VIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
......||..|+|||++.+..++.++||||||+++|||++|+.||......... ............ . +
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~-----~ 218 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED--P-----P 218 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC--C-----C
Confidence 223457899999999999889999999999999999999999999653222111 111111111111 1 1
Q ss_pred cc-CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1013 KL-QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1013 ~l-~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.+ ....+..+.++ +..|++.+|++||+++++++.
T Consensus 219 ~~~~~~~~~~~~~l------i~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 219 VLPVGQFSEKFVHF------ITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCcCCHHHHHH------HHHHhhCChhhCCCHHHHhcC
Confidence 11 11122334444 445999999999999999774
No 196
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.7e-33 Score=309.08 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=199.2
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+|++.+.||+|+||.||++... +++.||+|.++.. .....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999754 6889999998643 2334567889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+|+||||+||++++++.++++|||.++......
T Consensus 81 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 154 (255)
T cd08219 81 DGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-- 154 (255)
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc--
Confidence 9999999886533 23478999999999999999999999 99999999999999999999999999997664321
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......|++.|+|||++....++.++||||||+++|+|++|+.||... ............... .+
T Consensus 155 --~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~-------~~ 220 (255)
T cd08219 155 --AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKNLILKVCQGSYK-------PL 220 (255)
T ss_pred --cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-----CHHHHHHHHhcCCCC-------CC
Confidence 1123456889999999999888999999999999999999999999642 112222222111111 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
+...+..+.++++ .||+.+|++||++.+++..
T Consensus 221 ~~~~~~~~~~li~------~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIK------QMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHH------HHHhCCcccCCCHHHHhhc
Confidence 2223334444444 4999999999999999763
No 197
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.9e-33 Score=311.40 Aligned_cols=257 Identities=25% Similarity=0.444 Sum_probs=198.8
Q ss_pred CCCCCCeeeecCCeEEEEEEcCC-C---cEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPS-G---LTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.|++.+.||+|+||.||+|.... + ..||||+++.. .....++|..|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 47788999999999999997542 3 36999998754 2334567999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++++|.+++.... +.+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||+++.....
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 85 EFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999987643 3489999999999999999999999 9999999999999999999999999999866432
Q ss_pred CCCc-cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 932 SGGS-FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 932 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.... .........+..|+|||++....++.++|||||||++|||++ |..||.... ......++. .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~~~i~----~~~~~--- 230 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVINAIE----QDYRL--- 230 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHHHHHH----cCCcC---
Confidence 2111 011111112457999999998999999999999999999886 999996421 122222221 11110
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
..+...+..+.+++. .||+.+|++||++.++++.|+++
T Consensus 231 ---~~~~~~~~~~~~li~------~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 ---PPPMDCPTALHQLML------DCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---CCcccCCHHHHHHHH------HHcCCChhhCcCHHHHHHHHHhh
Confidence 011122334444444 49999999999999999998764
No 198
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.2e-33 Score=309.17 Aligned_cols=250 Identities=29% Similarity=0.420 Sum_probs=200.1
Q ss_pred CeeeecCCeEEEEEEcCC----CcEEEEEEeecCCccc-hHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLPS----GLTVAVKRFRASDKIS-TGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||.||+|.... +..||+|++....... .+.+.+|++.++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998643 7899999997654332 67889999999999999999999999999999999999999
Q ss_pred CChhhhhcCCCC------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 857 GTLGMLLHDGEC------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 857 gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
++|.+++..... ...+++.++.+++.|+++|++|||++ +|+||||||+||++++++.++|+|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999987521 24589999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
... ........++..|+|||.+....++.++||||+|+++|||++ |+.||... .. .+....... ...
T Consensus 158 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~---~~~~~~~~~-~~~---- 225 (262)
T cd00192 158 DDY--YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--SN---EEVLEYLRK-GYR---- 225 (262)
T ss_pred ccc--cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--CH---HHHHHHHHc-CCC----
Confidence 321 122334567889999999988889999999999999999999 69999753 11 122222211 111
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
...+...+..+.+++.. |++.+|++||++.++++.|+
T Consensus 226 --~~~~~~~~~~~~~li~~------~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 --LPKPEYCPDELYELMLS------CWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --CCCCccCChHHHHHHHH------HccCCcccCcCHHHHHHhhC
Confidence 11122223445555554 99999999999999998763
No 199
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.2e-33 Score=318.96 Aligned_cols=257 Identities=23% Similarity=0.293 Sum_probs=194.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.++||+|+||+||+++.+ +++.||+|++.+. .......+..|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999854 5788999998642 2223345888999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999997632 3488999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDP 1006 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1117)
.. .......||+.|+|||++. ...++.++|||||||++|||++|+.||... ...+............
T Consensus 156 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~ 227 (332)
T cd05623 156 GT---VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKERF 227 (332)
T ss_pred Cc---ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC-----CHHHHHHHHhCCCccc
Confidence 11 1223457999999999886 346889999999999999999999999642 2223333332221111
Q ss_pred ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1007 VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1007 ~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
. + +......+....++++. +.|...++..|+++.++++.
T Consensus 228 -~-~-p~~~~~~s~~~~~li~~----ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 -Q-F-PAQVTDVSEDAKDLIRR----LICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -c-C-CCccccCCHHHHHHHHH----HccChhhhcCCCCHHHHhCC
Confidence 0 1 11111223445555544 12444455557899888765
No 200
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2e-33 Score=309.80 Aligned_cols=254 Identities=27% Similarity=0.378 Sum_probs=191.1
Q ss_pred CeeeecCCeEEEEEEcC----CCcEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeee-cCCceEEEEEecC
Q 001238 782 NIIGQGRSGIVYKVTLP----SGLTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGA-NRKTKLLFYDYMP 855 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lv~e~~~ 855 (1117)
+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999743 2457999988543 2233567889999999999999999999765 4556789999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|+|.+++.... ...++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 999999987643 2367788899999999999999998 99999999999999999999999999998654321111
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhC-CCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITG-KKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
........++..|+|||.+....++.++||||||+++|||++| .+||... .............. + ..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-----~~~~~~~~~~~~~~-~------~~ 223 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----DSFDITVYLLQGRR-L------LQ 223 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHhcCCC-C------CC
Confidence 1112233567789999999888999999999999999999995 5566431 12222222222111 1 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
+...+..+.+ ++..||+.+|++||++.++++.++++..
T Consensus 224 ~~~~~~~~~~------li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 224 PEYCPDPLYE------VMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCcCCHHHHH------HHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 1122233444 4445999999999999999999988753
No 201
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.1e-34 Score=327.37 Aligned_cols=202 Identities=24% Similarity=0.333 Sum_probs=173.7
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
+|++.+.||+|+||+||+|.. .+++.||+|+++... ......+.+|++++..++||+|+++++++.+.+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 578889999999999999975 468999999997532 2334568889999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 82 FLPGGDMMTLLMKK---DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred CCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 99999999998754 3488999999999999999999999 99999999999999999999999999987553211
Q ss_pred CCc-------------------------------cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCC
Q 001238 933 GGS-------------------------------FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKP 981 (1117)
Q Consensus 933 ~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P 981 (1117)
... .......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 000 0011235799999999999999999999999999999999999999
Q ss_pred CCC
Q 001238 982 VDA 984 (1117)
Q Consensus 982 ~~~ 984 (1117)
|..
T Consensus 236 f~~ 238 (360)
T cd05627 236 FCS 238 (360)
T ss_pred CCC
Confidence 964
No 202
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.6e-33 Score=315.20 Aligned_cols=258 Identities=28% Similarity=0.404 Sum_probs=199.9
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCce
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 847 (1117)
.++|++.+.||+|+||.||+|... ++..||+|++.... ....+++.+|++++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 356889999999999999999753 46789999987543 22345788999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCe
Q 001238 848 LLFYDYMPNGTLGMLLHDGE-------------------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHN 908 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~N 908 (1117)
++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 99999999999999986431 112378889999999999999999999 99999999999
Q ss_pred EEEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCC
Q 001238 909 ILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFP 987 (1117)
Q Consensus 909 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~ 987 (1117)
|++++++.++|+|||+++....... .........+..|+|||.+....++.++|||||||++|||++ |..||.+.
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~-- 236 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY--YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM-- 236 (288)
T ss_pred eEecCCCceEECccccceecccCcc--ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--
Confidence 9999999999999999876543211 111222345678999999988899999999999999999998 88888532
Q ss_pred CChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 988 DGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
...+......... .. ..+...+..+.++ +.+|++.+|++||++.|+++.|++
T Consensus 237 ---~~~~~~~~~~~~~-~~------~~~~~~~~~l~~l------i~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 ---AHEEVIYYVRDGN-VL------SCPDNCPLELYNL------MRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ---CHHHHHHHHhcCC-CC------CCCCCCCHHHHHH------HHHHcccCcccCCCHHHHHHHhhC
Confidence 1122222222111 10 1112223344444 445999999999999999998863
No 203
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.9e-33 Score=319.03 Aligned_cols=201 Identities=26% Similarity=0.292 Sum_probs=172.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||+||+++.. +++.||+|++... .......+.+|+.++..++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999854 6889999998642 2223445788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999997632 3488999999999999999999999 9999999999999999999999999999866432
Q ss_pred CCCccccCCccccccccCChhhhcc-----CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANM-----TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.. .......||++|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 156 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 156 GT---VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred Cc---eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 21 12233579999999999875 4678999999999999999999999964
No 204
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.4e-33 Score=314.84 Aligned_cols=250 Identities=21% Similarity=0.270 Sum_probs=196.6
Q ss_pred CCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCcc---chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 778 LTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKI---STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
|+..+.||+|+||+||++.. .+++.||+|.+...... ..+.+.+|+.++++++|++|+++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 66778999999999999875 46899999998754221 234577899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred cCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999998865432 2388999999999999999999998 99999999999999999999999999997654221
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
......||..|+|||++.+..++.++||||+|+++|||++|+.||....... ............ ...
T Consensus 157 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~~~~~~~~~-------~~~ 223 (285)
T cd05630 157 ----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVKEV-------QEE 223 (285)
T ss_pred ----cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHHHHhhhhhh-------hhh
Confidence 1123478999999999998999999999999999999999999997532211 111111111111 011
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCC-----HHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPT-----MKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs-----~~~v~~ 1051 (1117)
.....+....++++. |++.||++||+ +.++++
T Consensus 224 ~~~~~~~~~~~li~~------~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 224 YSEKFSPDARSLCKM------LLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred cCccCCHHHHHHHHH------HhhcCHHHccCCCCCchHHHHc
Confidence 222334455555555 99999999999 788876
No 205
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.1e-33 Score=319.70 Aligned_cols=199 Identities=25% Similarity=0.369 Sum_probs=169.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
++|.+.+.||+|+||+||+|+.+ +++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888999999999999999754 67899999987543 22334678899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++ ++.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 158 (309)
T cd07872 86 LDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT- 158 (309)
T ss_pred CCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence 975 7877776542 3478899999999999999999999 99999999999999999999999999997653321
Q ss_pred CccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 159 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~ 207 (309)
T cd07872 159 ---KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPG 207 (309)
T ss_pred ---cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 12223467899999998764 5688999999999999999999999965
No 206
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.1e-33 Score=306.03 Aligned_cols=247 Identities=27% Similarity=0.396 Sum_probs=194.3
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCChh
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLG 860 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 860 (1117)
++||+|+||.||+|...+++.||+|+++.... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988889999999875432 22346889999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCC
Q 001238 861 MLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANP 940 (1117)
Q Consensus 861 ~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 940 (1117)
+++.... ..+++.++..++.|++.||.|+|++ +++||||||+||+++.++.+|++|||+++...... .....
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---~~~~~ 152 (250)
T cd05085 81 SFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI---YSSSG 152 (250)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccc---cccCC
Confidence 9887543 3478999999999999999999998 99999999999999999999999999997543221 11112
Q ss_pred ccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 941 QFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 941 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
...++..|+|||++....++.++||||||+++||+++ |..||.... ....... ...... ...+...+
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~-----~~~~~~~-~~~~~~------~~~~~~~~ 220 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT-----NQQAREQ-VEKGYR------MSCPQKCP 220 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH-HHcCCC------CCCCCCCC
Confidence 2344678999999998899999999999999999998 999996421 1111111 111111 11112223
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
..+.++ +..|++.+|++||++.++.+.|.
T Consensus 221 ~~~~~l------i~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKV------MQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHH------HHHHcccCcccCCCHHHHHHHhc
Confidence 344444 44599999999999999998874
No 207
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.6e-33 Score=309.10 Aligned_cols=253 Identities=26% Similarity=0.394 Sum_probs=200.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc-----cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK-----ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
++|.+.+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999999975 4689999999864321 123468889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
||||+++++|.+++... +.+++..+.+++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY---GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 99999999999988754 3378899999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.... .........++..|+|||++.+..++.++||||+|+++|||++|+.||.... . ...+........
T Consensus 156 ~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~-~~~~~~~~~~~~----- 224 (263)
T cd06625 156 TICS-SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE----A-MAAIFKIATQPT----- 224 (263)
T ss_pred cccc-ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc----h-HHHHHHHhccCC-----
Confidence 3211 1111134567889999999998889999999999999999999999996421 1 111111111111
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.+.++...+..+.++++. |+..+|++||++.++++.
T Consensus 225 -~~~~~~~~~~~~~~li~~------~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 -NPQLPSHVSPDARNFLRR------TFVENAKKRPSAEELLRH 260 (263)
T ss_pred -CCCCCccCCHHHHHHHHH------HhhcCcccCCCHHHHhhC
Confidence 122333344456666555 999999999999999763
No 208
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.5e-33 Score=307.91 Aligned_cols=249 Identities=28% Similarity=0.424 Sum_probs=201.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|++.+.||+|+||.||+|.. .|+.||+|.++.... ..+++.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 4688899999999999999987 478999999976543 46789999999999999999999999998899999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.++......
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 84 KGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 9999999876532 2489999999999999999999999 99999999999999999999999999998763221
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.....+..|+|||++....++.++||||||+++|||++ |+.||.... ... +......... +..
T Consensus 157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~----~~~~~~~~~~------~~~ 220 (256)
T cd05039 157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKD----VVPHVEKGYR------MEA 220 (256)
T ss_pred ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--HHH----HHHHHhcCCC------CCC
Confidence 12234668999999988889999999999999999997 999986421 111 2222222111 111
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
+...+..+.+++. .|+..+|++||++.+++++|+.
T Consensus 221 ~~~~~~~~~~li~------~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 221 PEGCPPEVYKVMK------DCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ccCCCHHHHHHHH------HHhccChhhCcCHHHHHHHHhc
Confidence 1222334444444 4999999999999999999875
No 209
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-33 Score=325.53 Aligned_cols=197 Identities=25% Similarity=0.348 Sum_probs=167.2
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCC-----
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRK----- 845 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 845 (1117)
..++|++.+.||+|+||.||++.. .+|+.||+|++... ......++.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 456899999999999999999975 46899999998653 2233456789999999999999999999886543
Q ss_pred -ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccc
Q 001238 846 -TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 846 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
..|+||||+++ ++...+.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 46999999975 55555543 278889999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 170 a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~ 224 (359)
T cd07876 170 ARTACTN-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 224 (359)
T ss_pred ccccccC-----ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 9765322 122345789999999999999999999999999999999999999975
No 210
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.5e-33 Score=306.58 Aligned_cols=253 Identities=27% Similarity=0.453 Sum_probs=200.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|++.+.||+|+||.||+|...++..||+|.++... ...+.+.+|++++++++|+||+++++++.+ ...+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 5788999999999999999987778889999887542 345678999999999999999999998877 77899999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.+++.... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+........
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 157 (260)
T cd05073 84 KGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-- 157 (260)
T ss_pred CCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc--
Confidence 999999997643 23478899999999999999999998 999999999999999999999999999986643211
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......++..|+|||++....++.++|||||||++|++++ |+.||... ........+ ...... ..
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~----~~~~~~------~~ 224 (260)
T cd05073 158 -TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRAL----ERGYRM------PR 224 (260)
T ss_pred -ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC--CHHHHHHHH----hCCCCC------CC
Confidence 12223345678999999998889999999999999999999 99999642 111222221 111110 01
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
....+..+.++ +..|++.+|++||++.++.++|+.
T Consensus 225 ~~~~~~~~~~~------i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 225 PENCPEELYNI------MMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cccCCHHHHHH------HHHHcccCcccCcCHHHHHHHHhc
Confidence 12222334444 445999999999999999999875
No 211
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=321.23 Aligned_cols=251 Identities=24% Similarity=0.344 Sum_probs=207.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+.|.++..||.|+||.||+|..++ +...|-|++........+.|.-|++++..+.||+||++++.|..++.+++..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 356677789999999999997654 5566788888777777788999999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
.||-.+.++-.-. ..+.+.++..+++|++.||.|||++ .|||||+|+.|||++-+|.++|+|||.+.....
T Consensus 112 ~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~---- 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS---- 182 (1187)
T ss_pred CCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh----
Confidence 9999998877653 3499999999999999999999999 999999999999999999999999999865432
Q ss_pred ccccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.......+.|||.|||||+.. +.+|+.++||||||+++.||..+.+|... ......+.++.+.. ++..
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe-----lnpMRVllKiaKSe--PPTL 255 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE-----LNPMRVLLKIAKSE--PPTL 255 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc-----cchHHHHHHHhhcC--CCcc
Confidence 223456789999999999764 57899999999999999999999999753 23444455554443 3333
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+- +..+...+.++++. |+..+|+.||+++++++
T Consensus 256 lq---PS~Ws~~F~DfLk~------cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 256 LQ---PSHWSRSFSDFLKR------CLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cC---cchhhhHHHHHHHH------HHhcCCccCCCHHHHhh
Confidence 32 33455567777776 99999999999998865
No 212
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.8e-33 Score=307.75 Aligned_cols=251 Identities=29% Similarity=0.475 Sum_probs=199.8
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccc---------hHHHHHHHHHHhccCCCCcceEEeeeecCCc
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKIS---------TGAFSSEIATLSRIRHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 846 (1117)
+|.+.+.||+|+||.||+|.. .+++.||+|.+....... .+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477889999999999999975 458899999886543221 2468889999999999999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLAR 926 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 926 (1117)
.++||||+++++|.+++... +.+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 99999999999999999764 3478899999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCC--ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCC
Q 001238 927 LVEDDSGG--SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKK 1004 (1117)
Q Consensus 927 ~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1117)
........ .........|+..|+|||.+....++.++||||+|+++|||++|+.||.... . ...+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~-~~~~~~~~~--- 226 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT----Q-LQAIFKIGE--- 226 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc----H-HHHHHHHhc---
Confidence 76532111 1112223568899999999998889999999999999999999999996421 1 111111111
Q ss_pred CCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1005 DPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1005 ~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
...+.++...+..+..+++. |++.+|++||++.++++
T Consensus 227 ----~~~~~~~~~~~~~~~~li~~------~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 ----NASPEIPSNISSEAIDFLEK------TFEIDHNKRPTAAELLK 263 (267)
T ss_pred ----cCCCcCCcccCHHHHHHHHH------HccCCchhCcCHHHHhh
Confidence 11122333444556666665 99999999999999876
No 213
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2e-33 Score=317.35 Aligned_cols=197 Identities=30% Similarity=0.436 Sum_probs=172.1
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+|++.+.||+|+||.||++... ++..||+|.+..... ....++.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 6888999999999999999754 688899998875422 23456889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.++++.. +.+++..+..++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 153 (308)
T cd06615 82 DGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 153 (308)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence 999999999764 34889999999999999999999732 8999999999999999999999999998765332
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
......++..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 12345789999999999888899999999999999999999999864
No 214
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2e-33 Score=309.60 Aligned_cols=239 Identities=22% Similarity=0.357 Sum_probs=185.1
Q ss_pred CeeeecCCeEEEEEEcCC-------------CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceE
Q 001238 782 NIIGQGRSGIVYKVTLPS-------------GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 848 (1117)
+.||+|+||.||+|.+.. ...||+|.+..........|.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999997432 2358999887655545567889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc-------ceecc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE-------SCLAD 921 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~-------~kl~D 921 (1117)
+||||+++|+|..++.... +.+++..+.+++.||++|++|||++ +|+||||||+||+++.++. ++++|
T Consensus 81 lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 9999999999998887542 3489999999999999999999999 9999999999999987654 89999
Q ss_pred ccccccccCCCCCccccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHH-hCCCCCCCCCCCChhHHHHHHHH
Q 001238 922 FGLARLVEDDSGGSFSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEII-TGKKPVDASFPDGQHVIQWVRDH 999 (1117)
Q Consensus 922 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell-~g~~P~~~~~~~~~~~~~~~~~~ 999 (1117)
||++..... .....++..|+|||++. ...++.++|||||||++|||+ .|+.||..... .+ ....
T Consensus 156 ~g~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~-~~~~ 221 (262)
T cd05077 156 PGIPITVLS--------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-----AE-KERF 221 (262)
T ss_pred CCCCccccC--------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-----hH-HHHH
Confidence 999875532 12345788999999886 567899999999999999998 58888754211 11 1111
Q ss_pred HhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1000 LKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1000 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
..... . ........+.. ++..||+.||++||++.++++.+
T Consensus 222 ~~~~~---~-----~~~~~~~~~~~------li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 YEGQC---M-----LVTPSCKELAD------LMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HhcCc---c-----CCCCChHHHHH------HHHHHcCCChhhCcCHHHHHHhc
Confidence 11110 0 01111223344 44459999999999999998865
No 215
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-33 Score=315.97 Aligned_cols=261 Identities=25% Similarity=0.363 Sum_probs=200.8
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC--------CCcEEEEEEeecCC-ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP--------SGLTVAVKRFRASD-KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRK 845 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 845 (1117)
.+|.+.++||+|+||.||+|... .+..||+|+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46888999999999999998631 24579999987542 22345688999999999 6999999999999999
Q ss_pred ceEEEEEecCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGEC-------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG 912 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~ 912 (1117)
..++||||+++|+|.+++..... ...+++.++.+++.|++.||+|||++ +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 99999999999999999865321 23488999999999999999999998 999999999999999
Q ss_pred CCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChh
Q 001238 913 ERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQH 991 (1117)
Q Consensus 913 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~ 991 (1117)
+++.+||+|||+++........ .......++..|+|||++....++.++||||||+++|||++ |..||.... ...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~--~~~ 244 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYY--KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP--VEE 244 (314)
T ss_pred CCCcEEEccccccccccccccc--cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC--HHH
Confidence 9999999999999866432111 11112234567999999988899999999999999999999 899986421 111
Q ss_pred HHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 992 VIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
....+ ..... ...+...+..+.+++ ..|++.+|++||++.++++.|+++...
T Consensus 245 ~~~~~----~~~~~------~~~~~~~~~~l~~li------~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 245 LFKLL----REGHR------MDKPSNCTHELYMLM------RECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHHH----HcCCC------CCCCCCCCHHHHHHH------HHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 22211 11111 011222223344444 459999999999999999999988653
No 216
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-34 Score=308.59 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=200.5
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
.+..-|.+.+.||+|.|++|-.|++- +|+.||||++.+. +......+.+|++.|+.++|||||++|.+.......|+
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL 94 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL 94 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence 34456888899999999999998743 7999999999765 34445678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc-CCCcceeccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG-ERYESCLADFGLARLV 928 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~-~~~~~kl~DfGla~~~ 928 (1117)
|.|.-++|+|.+|+..++. .+.++.+.+++.||+.|+.|+|.. .+||||+||+||.+- +-|-+|+.|||++-.+
T Consensus 95 iLELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EEEecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 9999999999999987653 289999999999999999999999 899999999999875 4589999999999877
Q ss_pred cCCCCCccccCCccccccccCChhhhccCCCC-cCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMTKIS-EKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
.++ ...++.+|+..|-|||++.+..|+ +++||||+|||+|-+++|++||+..... +-..++.+ =+..
T Consensus 170 ~PG-----~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS--ETLTmImD---CKYt-- 237 (864)
T KOG4717|consen 170 QPG-----KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS--ETLTMIMD---CKYT-- 237 (864)
T ss_pred CCc-----chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch--hhhhhhhc---cccc--
Confidence 653 245677999999999999999887 7899999999999999999999764221 11222211 1111
Q ss_pred cccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1008 EVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1008 ~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
++.....+.+.++.. |+..||.+|.+.++|+.
T Consensus 238 ------vPshvS~eCrdLI~s------MLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 238 ------VPSHVSKECRDLIQS------MLVRDPKKRASLEEIVS 269 (864)
T ss_pred ------CchhhhHHHHHHHHH------HHhcCchhhccHHHHhc
Confidence 122222333443333 66679999999888754
No 217
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-33 Score=312.12 Aligned_cols=252 Identities=23% Similarity=0.337 Sum_probs=197.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
++|++.+.||+|+||.||+|.. .+++.||+|+++.........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4678888999999999999975 468899999998665445567889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++... +.+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 89 ~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 89 GGGSLQDIYHVT---GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 999999988654 3489999999999999999999999 99999999999999999999999999987654321
Q ss_pred ccccCCccccccccCChhhhc---cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 935 SFSANPQFAGSYGYIAPEYAN---MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
.......|+..|+|||++. ...++.++||||+||++|||++|+.||....+. ..+.........+... .
T Consensus 161 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~-~ 232 (267)
T cd06645 161 --AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-----RALFLMTKSNFQPPKL-K 232 (267)
T ss_pred --cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-----hhHHhhhccCCCCCcc-c
Confidence 2233457899999999874 456889999999999999999999998542211 1111111111111110 0
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
. ....+..+.+++. .|++.+|++||+++++++
T Consensus 233 -~-~~~~~~~~~~li~------~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 -D-KMKWSNSFHHFVK------MALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -c-cCCCCHHHHHHHH------HHccCCchhCcCHHHHhc
Confidence 0 0112233444444 499999999999999875
No 218
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.1e-33 Score=325.91 Aligned_cols=199 Identities=26% Similarity=0.352 Sum_probs=168.3
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCC-----ceE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRK-----TKL 848 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 848 (1117)
+|++.+.||+|+||+||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999985 47899999998643 2233457889999999999999999999988776 789
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+||||+. ++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 5777777543 3489999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
..... .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 154 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 154 EPDES---KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred ccCcc---ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 43211 12234468899999999876 45789999999999999999999999753
No 219
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-33 Score=315.21 Aligned_cols=253 Identities=22% Similarity=0.385 Sum_probs=202.8
Q ss_pred HHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 772 GDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 772 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++...+|++.+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+++++.++||||+++++++...+..++|
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 15 GDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred CCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 33445789999999999999999874 57899999999766555567889999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++++|..++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 95 MEYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999999988653 389999999999999999999999 999999999999999999999999999886543
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
... ......++..|+|||.+....++.++|||||||++|+|++|+.||....+ ...............
T Consensus 168 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-----~~~~~~~~~~~~~~~--- 235 (296)
T cd06655 168 EQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----LRALYLIATNGTPEL--- 235 (296)
T ss_pred ccc----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcCCccc---
Confidence 221 12334688999999999888899999999999999999999999965321 111111111111110
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+...+..+.++++. ||..+|++||++.++++
T Consensus 236 --~~~~~~~~~~~~li~~------~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 236 --QNPEKLSPIFRDFLNR------CLEMDVEKRGSAKELLQ 268 (296)
T ss_pred --CCcccCCHHHHHHHHH------HhhcChhhCCCHHHHhh
Confidence 0112223344555444 99999999999999986
No 220
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-34 Score=311.08 Aligned_cols=253 Identities=23% Similarity=0.370 Sum_probs=196.0
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEee--cCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFR--ASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 850 (1117)
..+.|++.++||+||.+.||++...+.+.||+|++. ..+....+-|..|+..|.++ .|.+||++++|-..++..|+|
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 456799999999999999999998888889988764 34556677899999999999 599999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||- ..+|..+++..... ...| .++.+..||+.|+.++|.+ ||||.||||.|+|+-. |.+||+|||+|..+..
T Consensus 439 mE~G-d~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred eecc-cccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 9985 56899999876432 1334 7788999999999999999 9999999999999864 7999999999998865
Q ss_pred CCCCccccCCccccccccCChhhhccCC-----------CCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHH
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTK-----------ISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDH 999 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~ 999 (1117)
+.. .......+||+.||+||.+.... +++++||||+|||+|+|+.|+.||.. ....+.+.
T Consensus 512 DTT--sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~-------~~n~~aKl 582 (677)
T KOG0596|consen 512 DTT--SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ-------IINQIAKL 582 (677)
T ss_pred ccc--ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH-------HHHHHHHH
Confidence 432 23445679999999999886432 56899999999999999999999953 12111111
Q ss_pred HhcCCCC-ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1000 LKSKKDP-VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1000 ~~~~~~~-~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
. ...++ .+.--|.++... .+.++++. |++.||.+||+..++++
T Consensus 583 ~-aI~~P~~~Iefp~~~~~~--~li~~mK~------CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 583 H-AITDPNHEIEFPDIPEND--ELIDVMKC------CLARDPKKRWSIPELLQ 626 (677)
T ss_pred H-hhcCCCccccccCCCCch--HHHHHHHH------HHhcCcccCCCcHHHhc
Confidence 1 11112 111112222222 24444444 99999999999999977
No 221
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.4e-33 Score=309.15 Aligned_cols=255 Identities=24% Similarity=0.397 Sum_probs=196.6
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
+++.+.....||+|+||.||+|.. .+++.||+|.+........+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 345555667899999999999974 4678899999876655556789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-CCcceeccccccccccCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-RYESCLADFGLARLVEDD 931 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfGla~~~~~~ 931 (1117)
|+++++|.+++.........++..+..++.|+++|++|||++ +|+||||||+||+++. ++.++|+|||.+......
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 999999999987642211127888899999999999999999 9999999999999986 679999999999765432
Q ss_pred CCCccccCCccccccccCChhhhccC--CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMT--KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
. .......+++.|+|||++... .++.++||||||+++|||++|+.||..... .....+......
T Consensus 163 ~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~--~~~~~~~~~~~~-------- 228 (268)
T cd06624 163 N----PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE--PQAAMFKVGMFK-------- 228 (268)
T ss_pred C----CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC--hhhhHhhhhhhc--------
Confidence 1 122234588999999998654 378899999999999999999999964211 111111111001
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+.++...+..+..+++ .|++.+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~li~------~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 229 IHPEIPESLSAEAKNFIL------RCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cCCCCCcccCHHHHHHHH------HHcCCCchhCCCHHHHHh
Confidence 112223333444555554 499999999999999876
No 222
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.2e-33 Score=311.92 Aligned_cols=198 Identities=30% Similarity=0.360 Sum_probs=165.1
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhcc---CCCCcceEEeeeec-----CC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRI---RHRNIVRLLGWGAN-----RK 845 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~-----~~ 845 (1117)
+|++.+.||+|+||+||+|... +++.||+|.++.... .....+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999754 689999999875322 2233566788877766 69999999998764 24
Q ss_pred ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
..++||||+++ +|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcc
Confidence 57899999974 88888876432 3389999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+...... ......||..|+|||++.+..++.++||||+||++|||++|++||..
T Consensus 156 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~ 209 (288)
T cd07863 156 RIYSCQM-----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 209 (288)
T ss_pred ccccCcc-----cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCC
Confidence 8764321 22345689999999999888999999999999999999999999964
No 223
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.1e-33 Score=308.79 Aligned_cols=257 Identities=26% Similarity=0.419 Sum_probs=200.8
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC----CcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS----GLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++|++.+.||+|+||.||+|...+ ...||||...... ....+.+.+|++++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 458888999999999999997533 3479999887554 3345678999999999999999999998875 567899
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 85 MELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 99999999999997643 2489999999999999999999998 999999999999999999999999999986643
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.. ........++..|+|||.+....++.++||||||+++||+++ |..||..... ......+ ......
T Consensus 160 ~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~----~~~~~~--- 227 (270)
T cd05056 160 ES---YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRI----ENGERL--- 227 (270)
T ss_pred cc---ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH----HcCCcC---
Confidence 21 111122334568999999988889999999999999999996 9999965321 1111111 111111
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQE 1059 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~ 1059 (1117)
..+...+..+.+++. .|+..+|++||++.++++.|+++..+
T Consensus 228 ---~~~~~~~~~~~~li~------~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 ---PMPPNCPPTLYSLMT------KCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ---CCCCCCCHHHHHHHH------HHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 112233345555554 49999999999999999999988764
No 224
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.9e-33 Score=324.23 Aligned_cols=197 Identities=23% Similarity=0.293 Sum_probs=167.3
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecC------
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANR------ 844 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 844 (1117)
..++|++.+.||+|+||.||++.. ..++.||||++.... .....++.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457899999999999999999975 468899999987532 22345678899999999999999999987643
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
...++||||+++ ++...+.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcc
Confidence 346999999975 56665543 278899999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 166 ~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 166 ARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred cccCCCc-----cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9865432 122345789999999999988999999999999999999999999965
No 225
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.4e-33 Score=313.04 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=195.8
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecC------
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANR------ 844 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~------ 844 (1117)
+++..|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+++++++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 3566788889999999999999975 468899999987543 3456788999999998 699999999988653
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
...++||||+++++|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||++++++.++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCC
Confidence 45789999999999999987643 23488999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHH
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDH 999 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~ 999 (1117)
++...... .......|+..|+|||++. ...++.++|||||||++|||++|+.||..... ..... ..
T Consensus 158 ~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~----~~~~~-~~ 228 (272)
T cd06637 158 SAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP----MRALF-LI 228 (272)
T ss_pred ceeccccc----ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH----HHHHH-HH
Confidence 98654321 1234467899999999885 34688899999999999999999999964211 11111 11
Q ss_pred HhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1000 LKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1000 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
... ..... .....+..+.+++. .|+..+|.+||++.++++
T Consensus 229 -~~~-~~~~~----~~~~~~~~~~~li~------~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 229 -PRN-PAPRL----KSKKWSKKFQSFIE------SCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -hcC-CCCCC----CCCCcCHHHHHHHH------HHcCCChhhCCCHHHHhh
Confidence 111 01111 11122334455444 499999999999999875
No 226
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.7e-33 Score=311.30 Aligned_cols=249 Identities=23% Similarity=0.314 Sum_probs=196.3
Q ss_pred CCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 567788999999999999854 5788999998765555566788999999999999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
++|..++.... +.+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++.......
T Consensus 87 ~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 87 GAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 99998876532 3489999999999999999999999 99999999999999999999999999997654321
Q ss_pred ccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 937 SANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
.......++..|+|||++. ...++.++|||||||++|||++|++||.... ..+.+......... ...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~~~~~~~~~~--~~~- 229 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSEPP--TLA- 229 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC-----HHHHHHHHhhcCCC--CCC-
Confidence 1223456899999999873 4557889999999999999999999986421 11222222211111 111
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+...+..+.++++. ||+.+|++||++.++++
T Consensus 230 --~~~~~~~~~~~li~~------~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 230 --QPSRWSSEFKDFLKK------CLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --CccccCHHHHHHHHH------HccCChhhCcCHHHHhc
Confidence 112233455555554 99999999999998865
No 227
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-33 Score=316.17 Aligned_cols=253 Identities=24% Similarity=0.376 Sum_probs=202.8
Q ss_pred HHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 772 GDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 772 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++...+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 45567899999999999999999974 57899999999866555567788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++++|.+++... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred ecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 9999999999998653 378899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.. .......+++.|+|||...+..++.++|||||||++|+|++|+.||....+.. ......... .+ .
T Consensus 168 ~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~-----~~~~~~~~~-~~-~-- 234 (297)
T cd06656 168 EQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-----ALYLIATNG-TP-E-- 234 (297)
T ss_pred Cc----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-----heeeeccCC-CC-C--
Confidence 21 11234468899999999998889999999999999999999999996432211 000001111 00 0
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
...+...+..+.+++. .|++.+|++||++.++++
T Consensus 235 -~~~~~~~~~~~~~li~------~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 235 -LQNPERLSAVFRDFLN------RCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred -CCCccccCHHHHHHHH------HHccCChhhCcCHHHHhc
Confidence 0011222334444444 499999999999999987
No 228
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.4e-33 Score=324.51 Aligned_cols=197 Identities=23% Similarity=0.307 Sum_probs=167.4
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecC------
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANR------ 844 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 844 (1117)
..++|++.+.||+|+||.||++.. ..++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 356899999999999999999975 46889999998753 223345678899999999999999999987543
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
...|+||||+++ ++.+.+.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 356999999965 66666643 278899999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 173 a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 173 ARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred ccccCCC-----CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 9865432 122345789999999999999999999999999999999999999965
No 229
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.7e-33 Score=308.68 Aligned_cols=252 Identities=22% Similarity=0.324 Sum_probs=189.4
Q ss_pred eeeecCCeEEEEEEcCCC---cEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCC
Q 001238 783 IIGQGRSGIVYKVTLPSG---LTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGT 858 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 858 (1117)
.||+|+||+||+|...++ ..+++|.++... ....+.+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999875433 346677665432 2345678999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccc
Q 001238 859 LGMLLHDGEC-AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFS 937 (1117)
Q Consensus 859 L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 937 (1117)
|.++++.... ....++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++....... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~--~~~ 156 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED--YIE 156 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcch--hhh
Confidence 9999876422 23366778889999999999999998 99999999999999999999999999986432211 111
Q ss_pred cCCccccccccCChhhhcc-------CCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 938 ANPQFAGSYGYIAPEYANM-------TKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
......++..|+|||++.. ..++.++||||||+++|||++ |..||... ...+.+....... ....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~-----~~~~~~~~~~~~~--~~~~ 229 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL-----SDREVLNHVIKDQ--QVKL 229 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhhc--cccc
Confidence 2234568899999998743 345789999999999999997 57787532 1122222222222 2223
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
.++.+....+..+.++++. || .+|++||++++|++.|
T Consensus 230 ~~~~~~~~~~~~~~~l~~~------c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 230 FKPQLELPYSERWYEVLQF------CW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCCccCCCCcHHHHHHHHH------Hh-hCcccCCCHHHHHHHh
Confidence 3455554455555565555 88 5799999999998876
No 230
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.1e-33 Score=307.93 Aligned_cols=253 Identities=25% Similarity=0.396 Sum_probs=199.6
Q ss_pred CCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCc------cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDK------ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
+|++.+.||+|+||+||+|...+++.||+|.++.... ...+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4788899999999999999887899999998864321 1234688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++++|.+++.+. +.+++..+..++.|++.|++|||+. +|+|+||||+||++++++.++|+|||+++....
T Consensus 81 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 9999999999999764 2378999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCC--ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 931 DSGG--SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 931 ~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.... .........|+..|+|||++.+..++.++||||||+++|||++|+.||.... ..... ....... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~-~~~~~~~-~--- 225 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD----RLAAM-FYIGAHR-G--- 225 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC----hHHHH-HHhhhcc-C---
Confidence 1111 1112234568999999999998889999999999999999999999996421 11111 1111110 0
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+.++...+..+..+++. |++.+|++||++.++++
T Consensus 226 -~~~~~~~~~~~~~~~~i~~------~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 226 -LMPRLPDSFSAAAIDFVTS------CLTRDQHERPSALQLLR 261 (265)
T ss_pred -CCCCCCCCCCHHHHHHHHH------HhcCCcccCCCHHHHhc
Confidence 1122333344455555555 99999999999999875
No 231
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-33 Score=327.93 Aligned_cols=197 Identities=25% Similarity=0.330 Sum_probs=169.6
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC---CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP---SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
..+|.+.+.||+|+||.||++... .++.||+|.+... ..+.+|++++++++|||||++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999998642 4678999987643 24568999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+. ++|.+++... +.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.++|+|||+++.....
T Consensus 166 e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 166 PKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred hhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9995 6788877432 3489999999999999999999999 9999999999999999999999999999866542
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
.. ........||+.|+|||++....++.++|||||||++|||++|+.||.+.
T Consensus 239 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 290 (392)
T PHA03207 239 PD--TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK 290 (392)
T ss_pred cc--cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 21 11223467999999999999999999999999999999999999999653
No 232
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.6e-33 Score=311.96 Aligned_cols=200 Identities=26% Similarity=0.336 Sum_probs=170.4
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999854 68999999986532 22345788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
++ ++|.+++........+++..+..++.|+++||+|||++ +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 68888887644445689999999999999999999999 99999999999999999999999999997654321
Q ss_pred CccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......+++.|+|||++.+ ..++.++||||||+++|||++|+.||..
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~ 204 (285)
T cd07861 156 ---RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHG 204 (285)
T ss_pred ---ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12223457889999998765 4578899999999999999999999975
No 233
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6e-33 Score=307.45 Aligned_cols=250 Identities=29% Similarity=0.461 Sum_probs=191.7
Q ss_pred CeeeecCCeEEEEEEcCC-Cc--EEEEEEeecC-CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLPS-GL--TVAVKRFRAS-DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||.||+|..++ +. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998643 43 5788888743 233445788999999999 799999999999999999999999999
Q ss_pred CChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 857 GTLGMLLHDGEC-------------AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 857 gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
|+|.+++..... ...+++.++.+++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999875321 12478999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhc
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKS 1002 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~ 1002 (1117)
+++..... ........+..|+|||++....++.++||||||+++|||++ |+.||.... ....... ...
T Consensus 158 l~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~~~~~~-~~~ 226 (270)
T cd05047 158 LSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEK-LPQ 226 (270)
T ss_pred Cccccchh-----hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC-----HHHHHHH-HhC
Confidence 98633211 11112234567999999988899999999999999999997 999996421 1111111 111
Q ss_pred CCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1003 KKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1003 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
... ...+...+..+.+++ ..|++.+|.+||++.++++.|+++.
T Consensus 227 ~~~------~~~~~~~~~~~~~li------~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 GYR------LEKPLNCDDEVYDLM------RQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCC------CCCCCcCCHHHHHHH------HHHcccChhhCCCHHHHHHHHHHhh
Confidence 100 111122233444444 4599999999999999999998764
No 234
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=6.5e-33 Score=304.77 Aligned_cols=250 Identities=30% Similarity=0.434 Sum_probs=194.2
Q ss_pred CeeeecCCeEEEEEEcC--C--CcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTLP--S--GLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
++||+|+||.||+|... + +..||+|.+..... ...+++.+|+++++++.||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999998642 2 36899999875533 24567889999999999999999999876 4567999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++........ .
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~-~ 152 (257)
T cd05060 80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY-Y 152 (257)
T ss_pred CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc-c
Confidence 99999997653 488999999999999999999999 9999999999999999999999999999876543211 1
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......++..|+|||......++.++||||||+++|||++ |+.||... .......++. ..... ..+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~--~~~~~~~~~~----~~~~~------~~~ 220 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEM--KGAEVIAMLE----SGERL------PRP 220 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHH----cCCcC------CCC
Confidence 11222234568999999998899999999999999999998 99999643 2222323222 11110 111
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
...+..+.+ ++..|+..+|++||++.++.+.|+++.
T Consensus 221 ~~~~~~l~~------li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 221 EECPQEIYS------IMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCHHHHH------HHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 222334444 444599999999999999999998763
No 235
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.2e-33 Score=317.38 Aligned_cols=197 Identities=25% Similarity=0.370 Sum_probs=160.6
Q ss_pred CCeeeecCCeEEEEEEcC---CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeec--CCceEEEEEecC
Q 001238 781 GNIIGQGRSGIVYKVTLP---SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGAN--RKTKLLFYDYMP 855 (1117)
Q Consensus 781 ~~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~~ 855 (1117)
+++||+|+||+||+|+.. +++.||+|++.... ....+.+|++++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999854 46789999987543 23457889999999999999999998754 456789999985
Q ss_pred CCChhhhhcCCC------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEE----cCCCcceecccccc
Q 001238 856 NGTLGMLLHDGE------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILL----GERYESCLADFGLA 925 (1117)
Q Consensus 856 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill----~~~~~~kl~DfGla 925 (1117)
++|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 57777765321 122488999999999999999999999 99999999999999 45678999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+....... .........||+.|+|||++.+ ..++.++||||+||++|||++|++||..
T Consensus 160 ~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLK-PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCc-cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 87643221 1122345678999999998876 4689999999999999999999999964
No 236
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.1e-33 Score=305.48 Aligned_cols=250 Identities=28% Similarity=0.473 Sum_probs=198.6
Q ss_pred CCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+|++.+.||+|+||.||+|.+.+++.+|+|+++... ...++|.+|++++++++|||++++++++......++||||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 577789999999999999988778899999887543 3456799999999999999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
++|.+++.... +.++++.+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++...... .
T Consensus 84 ~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---~ 155 (256)
T cd05112 84 GCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ---Y 155 (256)
T ss_pred CcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc---c
Confidence 99999987643 3478999999999999999999999 99999999999999999999999999998654321 1
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......++.+|+|||...+..++.++||||||+++|||++ |+.||.... ............ ....+
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~----~~~~~--- 223 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----NSEVVETINAGF----RLYKP--- 223 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHhCCC----CCCCC---
Confidence 11222345678999999998899999999999999999998 999986421 112222211111 00111
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
...+..+.+ ++.+|++.+|++||++.++++.+
T Consensus 224 ~~~~~~~~~------l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 RLASQSVYE------LMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCHHHHH------HHHHHcccChhhCCCHHHHHHhh
Confidence 112233334 45559999999999999999876
No 237
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=292.67 Aligned_cols=248 Identities=21% Similarity=0.287 Sum_probs=200.3
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccch---HHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKIST---GAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
.++|...++||+|.||.|-.++. .+|+.||+|++++...... ..-..|-++++..+||.+..+.-.|+..+..|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 46788999999999999999874 4699999999987643333 3345699999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+.||.|.-++.+.+ .++++.++.+-..|+.||.|||++ +||+||+|.+|.++|.+|++||+|||+++.-..
T Consensus 247 MeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999998887753 388888889999999999999999 999999999999999999999999999986543
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.. ....+++|||.|+|||++....|+.++|.|.+|||+|||++|+.||... +...+.+.+.. .+
T Consensus 321 ~g----~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~--dh~kLFeLIl~---ed------- 384 (516)
T KOG0690|consen 321 YG----DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK--DHEKLFELILM---ED------- 384 (516)
T ss_pred cc----ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc--chhHHHHHHHh---hh-------
Confidence 22 3456789999999999999999999999999999999999999999642 22333333221 11
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
-.++.........++.- .+..||.+|- ++.||.+
T Consensus 385 -~kFPr~ls~eAktLLsG------LL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 385 -LKFPRTLSPEAKTLLSG------LLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred -ccCCccCCHHHHHHHHH------HhhcChHhhcCCCchhHHHHHh
Confidence 12233334445555544 5677999994 5666654
No 238
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.3e-33 Score=312.44 Aligned_cols=252 Identities=25% Similarity=0.399 Sum_probs=198.3
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+|++.+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5788899999999999999864 6899999988754 2233467889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|..++........+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 156 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--- 156 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence 99999998876433345899999999999999999999632 8999999999999999999999999999765322
Q ss_pred ccccCCccccccccCChhhhccC------CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMT------KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
......+++.|+|||.+.+. .++.++|||||||++|||++|+.||.... .......+....... +
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~--~-- 227 (286)
T cd06622 157 ---LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET--YANIFAQLSAIVDGD--P-- 227 (286)
T ss_pred ---ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc--hhhHHHHHHHHhhcC--C--
Confidence 12234678899999988544 35889999999999999999999996421 112222222222111 1
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+.++...+..+.+++.. |++.+|++||++.++++
T Consensus 228 ---~~~~~~~~~~~~~li~~------~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 228 ---PTLPSGYSDDAQDFVAK------CLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ---CCCCcccCHHHHHHHHH------HcccCcccCCCHHHHhc
Confidence 12222344455555554 99999999999999987
No 239
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.5e-34 Score=312.34 Aligned_cols=252 Identities=30% Similarity=0.466 Sum_probs=196.4
Q ss_pred CCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchH--HHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTG--AFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
|++++.||+|+||+||+++.. +++.||+|++......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 566789999999999999865 4678999999876543332 2345999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++... +.+++.++..++.|+++||+|||+. +|+||||||+||++++++.++|+|||.+.....
T Consensus 81 ~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~---- 150 (260)
T PF00069_consen 81 PGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE---- 150 (260)
T ss_dssp TTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS----
T ss_pred cccccccccccc---ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc----
Confidence 999999999822 3489999999999999999999999 999999999999999999999999999976421
Q ss_pred ccccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 935 SFSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.........++..|+|||++. ...++.++||||+|+++|+|++|..||... ........+.......... . ..
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~-~---~~ 224 (260)
T PF00069_consen 151 NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES--NSDDQLEIIEKILKRPLPS-S---SQ 224 (260)
T ss_dssp TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS--SHHHHHHHHHHHHHTHHHH-H---TT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc--cchhhhhhhhhcccccccc-c---cc
Confidence 112344567899999999998 888999999999999999999999999753 1122222222222111000 0 00
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
........+.++++ .|++.||++||++.++++
T Consensus 225 ~~~~~~~~l~~li~------~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 225 QSREKSEELRDLIK------KMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SHTTSHHHHHHHHH------HHSSSSGGGSTTHHHHHT
T ss_pred ccchhHHHHHHHHH------HHccCChhHCcCHHHHhc
Confidence 00011134444444 499999999999999875
No 240
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-33 Score=328.18 Aligned_cols=193 Identities=22% Similarity=0.290 Sum_probs=166.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.+|.+.+.||+|+||.||++.+. .++.||||... ...+.+|++++++++|||||++++++...+..++|||++
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence 46999999999999999999864 57899999643 234678999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
. ++|.+++.... ..+++.+++.++.|+++||+|||++ +||||||||+|||++.++.+||+|||+++.......
T Consensus 243 ~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~- 315 (461)
T PHA03211 243 R-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS- 315 (461)
T ss_pred C-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc-
Confidence 5 68888776532 3489999999999999999999999 999999999999999999999999999987643211
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCC
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPV 982 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~ 982 (1117)
........||+.|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 316 -~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 316 -TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred -cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 11223457999999999999999999999999999999999988765
No 241
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.9e-33 Score=306.41 Aligned_cols=259 Identities=25% Similarity=0.393 Sum_probs=203.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
++|++.+.||.|+||+||+|... ++..||+|++.... ....+.+.+|+++++.++|+||+++++.+...+..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36889999999999999999854 67899999986532 22456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++......+.+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999997654334589999999999999999999999 999999999999999999999999999987765432
Q ss_pred CccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
..........|+..|+|||++... .++.++|||||||++|||++|+.||...... ....+....... ....
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~---~~~~ 229 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-----KVLMLTLQNDPP---SLET 229 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-----hhHHHHhcCCCC---CcCC
Confidence 221223445789999999998776 7899999999999999999999999653221 112222222111 1111
Q ss_pred cc-CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KL-QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l-~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.. ....+..+.+++. .|++.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~li~------~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 230 GADYKKYSKSFRKMIS------LCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ccccccccHHHHHHHH------HHcCCChhhCcCHHHHhh
Confidence 10 1122334445544 499999999999999876
No 242
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.2e-33 Score=310.44 Aligned_cols=263 Identities=25% Similarity=0.393 Sum_probs=202.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-----CCcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeec--CCce
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-----SGLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGAN--RKTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 847 (1117)
+.|++.+.||+|+||.||+|.+. +++.||||+++..... ..+.|.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 46778899999999999999743 4689999999765442 45679999999999999999999999877 5578
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 99999999999999997653 2489999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCCh---------hHHHHHHH
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQ---------HVIQWVRD 998 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~---------~~~~~~~~ 998 (1117)
....... ........++..|+|||......++.++||||||+++|||++|+.|+........ .....+..
T Consensus 159 ~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 159 LPEDKDY-YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred cccCCcc-eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 6532211 1112223456679999999888999999999999999999999999864322110 01111112
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
........ ..+...+..+. .++..|++.+|++||++.+|+++|+.+
T Consensus 238 ~~~~~~~~------~~~~~~~~~~~------~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 LLKEGERL------PRPPSCPDEVY------DLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHcCCcC------CCCccCCHHHH------HHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 22211110 00111222333 345569999999999999999999876
No 243
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.6e-33 Score=312.15 Aligned_cols=251 Identities=25% Similarity=0.355 Sum_probs=200.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
++|++.+.||+|+||.||+|.. .++..||+|+++.......+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 4688889999999999999986 468899999998765555677899999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++.... ..+++..+.+++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (280)
T cd06611 85 DGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-- 157 (280)
T ss_pred CCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc--
Confidence 9999999987643 3489999999999999999999999 99999999999999999999999999987654321
Q ss_pred ccccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.......+++.|+|||.+. ...++.++||||||+++|||++|+.||.... ....+........ + ..
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-~-~~ 228 (280)
T cd06611 158 --QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN-----PMRVLLKILKSEP-P-TL 228 (280)
T ss_pred --cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC-----HHHHHHHHhcCCC-C-Cc
Confidence 1223456899999999874 3456789999999999999999999996421 1122222221111 0 00
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+...+..+.+++.. |++.+|++||++.++++
T Consensus 229 ---~~~~~~~~~~~~li~~------~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 229 ---DQPSKWSSSFNDFLKS------CLVKDPDDRPTAAELLK 261 (280)
T ss_pred ---CCcccCCHHHHHHHHH------HhccChhhCcCHHHHhc
Confidence 0112233455555554 99999999999999976
No 244
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-33 Score=313.51 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=200.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
++|++.+.||+|+||+||++... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46788899999999999999754 68899999887543 23356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++... +.+++..+..++.+++.|+.|||+.. +++||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~-- 157 (284)
T cd06620 85 MDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS-- 157 (284)
T ss_pred CCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh--
Confidence 9999999988764 34899999999999999999999732 8999999999999999999999999998754321
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCC------hhHHHHHHHHHhcCCCCc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDG------QHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~------~~~~~~~~~~~~~~~~~~ 1007 (1117)
......|+..|+|||++....++.++|||||||++|||++|+.||......+ ......+........
T Consensus 158 ----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 230 (284)
T cd06620 158 ----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP--- 230 (284)
T ss_pred ----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC---
Confidence 1224578999999999988899999999999999999999999997543211 112223333222111
Q ss_pred cccCcccCC-CCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1008 EVLDPKLQG-HPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1008 ~~~~~~l~~-~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
+.+.. ..+..+.+++. .|++.||++||++.|++++..
T Consensus 231 ----~~~~~~~~~~~~~~li~------~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 231 ----PRLPSSDFPEDLRDFVD------ACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred ----CCCCchhcCHHHHHHHH------HHhcCCcccCcCHHHHhcCcc
Confidence 11111 12233444444 499999999999999998643
No 245
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.6e-33 Score=319.73 Aligned_cols=240 Identities=25% Similarity=0.272 Sum_probs=183.6
Q ss_pred eeecCCeEEEEEEcC-CCcEEEEEEeecCCc---cchHHHHHHHHHHhcc---CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 784 IGQGRSGIVYKVTLP-SGLTVAVKRFRASDK---ISTGAFSSEIATLSRI---RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
||+|+||+||+|+.. +++.||||++..... .....+..|..++... +||||+++++++.+.+..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999754 689999999864321 1223345566666655 699999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.+++... +.+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---- 150 (330)
T cd05586 81 GELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN---- 150 (330)
T ss_pred ChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC----
Confidence 9999888754 3489999999999999999999999 99999999999999999999999999997643221
Q ss_pred ccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 937 SANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||... ...+............. .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~~-------~ 218 (330)
T cd05586 151 KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-----DTQQMYRNIAFGKVRFP-------K 218 (330)
T ss_pred CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-----CHHHHHHHHHcCCCCCC-------C
Confidence 123346799999999988654 5899999999999999999999999642 12222222222211110 1
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCC----HHHHHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPT----MKDVAA 1051 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs----~~~v~~ 1051 (1117)
...+....++++. |++.+|.+||+ +.++++
T Consensus 219 ~~~~~~~~~li~~------~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 NVLSDEGRQFVKG------LLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ccCCHHHHHHHHH------HcCCCHHHCCCCCCCHHHHhc
Confidence 1223445555555 99999999984 555544
No 246
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.5e-33 Score=308.13 Aligned_cols=255 Identities=26% Similarity=0.422 Sum_probs=199.5
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc------cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK------ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
+|+..+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999974 5789999999874321 124568899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC-cceeccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY-ESCLADFGLARLV 928 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfGla~~~ 928 (1117)
||||+++++|.+++... +.+++..+..++.|++.||+|||++ +++||||||+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 99999999999998754 3488999999999999999999999 999999999999998776 5899999999876
Q ss_pred cCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
...............++..|+|||.+....++.++||||+|+++|+|++|+.||...... .....+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~----- 227 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASAT----- 227 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhccC-----
Confidence 543221112223456889999999998888999999999999999999999999643211 1112221111111
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+..+...+..+.+++.. |+..+|++||++.+++.
T Consensus 228 -~~~~~~~~~~~~~~~~i~~------~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 228 -TAPSIPEHLSPGLRDVTLR------CLELQPEDRPPSRELLK 263 (268)
T ss_pred -CCCCCchhhCHHHHHHHHH------HcCCCcccCcCHHHHhc
Confidence 1122233333445555544 99999999999999875
No 247
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.6e-33 Score=311.46 Aligned_cols=251 Identities=24% Similarity=0.320 Sum_probs=197.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+.|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56889999999999999999864 58899999998766555677899999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|..++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 92 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-- 164 (292)
T cd06644 92 PGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-- 164 (292)
T ss_pred CCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc--
Confidence 9999988876533 3489999999999999999999999 99999999999999999999999999987543221
Q ss_pred ccccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.......+++.|+|||++. ...++.++|||||||++|||++|+.||.... ....+....... .+ ..
T Consensus 165 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~-~~-~~ 235 (292)
T cd06644 165 --QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSE-PP-TL 235 (292)
T ss_pred --cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc-----HHHHHHHHhcCC-Cc-cC
Confidence 1223456888999999874 3457889999999999999999999986421 112222222111 11 10
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+...+..+.++++ .|++.+|++||++.++++
T Consensus 236 ---~~~~~~~~~~~~li~------~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 ---SQPSKWSMEFRDFLK------TALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---CCCcccCHHHHHHHH------HHhcCCcccCcCHHHHhc
Confidence 011122233444444 499999999999999876
No 248
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8.9e-33 Score=307.69 Aligned_cols=259 Identities=25% Similarity=0.371 Sum_probs=200.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCc----EEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGL----TVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
.+|++.+.||+|+||+||+|..+ +|+ .||+|....... ....++.+|++++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46788899999999999999753 233 689998875432 234578899999999999999999999887 78899
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
||||+++|+|.+++.... +.+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 86 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 999999999999987643 3489999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
..... .......++..|+|||.+....++.++||||||+++||+++ |+.||.... ..+.... +......
T Consensus 161 ~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~-~~~~~~~-- 230 (279)
T cd05057 161 VDEKE--YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-----AVEIPDL-LEKGERL-- 230 (279)
T ss_pred Ccccc--eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH-HhCCCCC--
Confidence 32211 11112234678999999988899999999999999999998 999996531 1122222 1111110
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEP 1060 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~ 1060 (1117)
..+...+..+..++ ..||..+|.+||++.++++.++++.+.+
T Consensus 231 ----~~~~~~~~~~~~~~------~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 231 ----PQPPICTIDVYMVL------VKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred ----CCCCCCCHHHHHHH------HHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 11111222344444 4499999999999999999999886543
No 249
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.2e-33 Score=320.98 Aligned_cols=198 Identities=24% Similarity=0.342 Sum_probs=168.4
Q ss_pred HHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecC----
Q 001238 772 GDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANR---- 844 (1117)
Q Consensus 772 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---- 844 (1117)
....++|++.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 34567899999999999999999974 568899999987532 22345677899999999999999999987543
Q ss_pred --CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccc
Q 001238 845 --KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADF 922 (1117)
Q Consensus 845 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 922 (1117)
...|++||++ +++|.+++... .+++..+..++.|+++||+|||++ +|+||||||+||++++++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3468999988 78998887643 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 923 GLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 923 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 163 g~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 163 GLARQADDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred ccceecCCC-------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999865431 234578999999999876 5789999999999999999999999964
No 250
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.4e-33 Score=303.35 Aligned_cols=250 Identities=24% Similarity=0.338 Sum_probs=200.8
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|+..+.||+|+||.||.++. .+++.||+|.+.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999874 468899999886542 33456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++.... ...+++.++..++.|+++|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999997653 23489999999999999999999998 999999999999999999999999999987643221
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
......+++.|+|||...+..++.++||||||+++|||++|+.||... ...+.+.........+
T Consensus 157 ----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~~~~~------- 220 (256)
T cd08221 157 ----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT-----NPLNLVVKIVQGNYTP------- 220 (256)
T ss_pred ----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCC-------
Confidence 223456899999999998888899999999999999999999999642 2223333322221111
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.....+..+.+++. .|++.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~~i~------~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 VVSVYSSELISLVH------SLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CccccCHHHHHHHH------HHcccCcccCCCHHHHhhC
Confidence 11222334444444 4999999999999999874
No 251
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.9e-33 Score=310.35 Aligned_cols=238 Identities=23% Similarity=0.350 Sum_probs=183.2
Q ss_pred eeeecCCeEEEEEEcC-------------------------CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceE
Q 001238 783 IIGQGRSGIVYKVTLP-------------------------SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRL 837 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 837 (1117)
.||+|+||.||+|.+. ....||+|++.........+|.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5999999999998631 123589998875544344578889999999999999999
Q ss_pred EeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC--
Q 001238 838 LGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY-- 915 (1117)
Q Consensus 838 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-- 915 (1117)
++++.+....++||||+++|+|..++.... +.+++..+.+++.|+++||+|||++ +|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcc
Confidence 999999999999999999999999886532 3488999999999999999999999 999999999999998643
Q ss_pred -----cceeccccccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHH-hCCCCCCCCCCC
Q 001238 916 -----ESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEII-TGKKPVDASFPD 988 (1117)
Q Consensus 916 -----~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell-~g~~P~~~~~~~ 988 (1117)
.+|++|||.+...... ....++..|+|||.+.. ..++.++||||||+++|||+ +|+.||....+
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~- 227 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR--------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP- 227 (274)
T ss_pred cCccceeeecCCccccccccc--------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh-
Confidence 3799999998654321 12357788999998865 56899999999999999995 69999865322
Q ss_pred ChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 989 GQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
...... ...... .+......+.+ ++..||+.+|++||++.+|++.|
T Consensus 228 -~~~~~~----~~~~~~--------~~~~~~~~~~~------li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 -SEKERF----YEKKHR--------LPEPSCKELAT------LISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred -HHHHHH----HHhccC--------CCCCCChHHHH------HHHHHcccChhhCcCHHHHHHhh
Confidence 111111 111111 11111123333 44459999999999999999876
No 252
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.3e-34 Score=317.86 Aligned_cols=245 Identities=24% Similarity=0.402 Sum_probs=197.4
Q ss_pred CCCCeeeecCCeEEEEEEc-CCCcEEEEEEeec----CCccchHHHHHHHHHHhccCCCCcceEEeeeecCCc--eEEEE
Q 001238 779 TAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRA----SDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT--KLLFY 851 (1117)
Q Consensus 779 ~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--~~lv~ 851 (1117)
+..++||+|+|-+||+|.+ .+|..||--.++. ......++|..|+.+|+.|+|||||++|+++.+... ..+|.
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 5567899999999999964 4577887433321 133345789999999999999999999999988766 56889
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-CCcceeccccccccccC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-RYESCLADFGLARLVED 930 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfGla~~~~~ 930 (1117)
|.+..|+|..|+++.+ .........|++||++||.|||++ .|+|+|||||.+||+|++ .|.+||+|.|+|.....
T Consensus 123 EL~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ecccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999998764 378889999999999999999997 679999999999999986 58999999999987754
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
. ......|||.|||||... ..|...+||||||+.++||+|+.+||.. =....++.++...+.+ |.
T Consensus 199 s------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE----C~n~AQIYKKV~SGiK-P~--- 263 (632)
T KOG0584|consen 199 S------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE----CTNPAQIYKKVTSGIK-PA--- 263 (632)
T ss_pred c------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh----hCCHHHHHHHHHcCCC-HH---
Confidence 2 223478999999999887 8999999999999999999999999964 2334555555544432 21
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+..-.+..+++++.. |+.. .++||++.|++.
T Consensus 264 --sl~kV~dPevr~fIek------Cl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 264 --ALSKVKDPEVREFIEK------CLAT-KSERLSAKELLK 295 (632)
T ss_pred --HhhccCCHHHHHHHHH------HhcC-chhccCHHHHhh
Confidence 1222334567777766 9998 999999999987
No 253
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.9e-33 Score=307.46 Aligned_cols=256 Identities=21% Similarity=0.362 Sum_probs=200.6
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC------CCcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP------SGLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 848 (1117)
.+|++.+.||+|+||+||+|+.+ +.+.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888899999999999999853 3467999988654332 3467999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhcCCCCC------CCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECA------GLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADF 922 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 922 (1117)
+||||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998765421 1489999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHh
Q 001238 923 GLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLK 1001 (1117)
Q Consensus 923 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 1001 (1117)
|+++...... ........++..|+|||.+....++.++||||||+++|||++ |..||.... .... +... .
T Consensus 162 ~~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~--~~~~---~~~~-~ 232 (275)
T cd05046 162 SLSKDVYNSE---YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS--DEEV---LNRL-Q 232 (275)
T ss_pred ccccccCccc---ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc--hHHH---HHHH-H
Confidence 9987543221 122334466788999999988889999999999999999999 888985421 1111 1111 1
Q ss_pred cCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1002 SKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1002 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
..... .......+..+.+++.. |++.+|++||++.++++.|.
T Consensus 233 ~~~~~-----~~~~~~~~~~l~~~i~~------~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 AGKLE-----LPVPEGCPSRLYKLMTR------CWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cCCcC-----CCCCCCCCHHHHHHHHH------HcCCCcccCCCHHHHHHHhc
Confidence 11100 01122333455555554 99999999999999999875
No 254
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=348.45 Aligned_cols=262 Identities=27% Similarity=0.409 Sum_probs=207.4
Q ss_pred chhhHHHhccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeec
Q 001238 767 LDLSIGDATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGAN 843 (1117)
Q Consensus 767 ~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 843 (1117)
+...+...+-+|..+..||.|.||.||.|. ..+|+-.|+|-++..+ ....+...+|..++..+.|||+|+++|+-.+
T Consensus 1226 la~~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH 1305 (1509)
T KOG4645|consen 1226 LASSLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH 1305 (1509)
T ss_pred HHHHhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec
Confidence 333455567788889999999999999986 5579999999876542 3334567899999999999999999999999
Q ss_pred CCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 844 RKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 844 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
++..++.||||++|+|.+.+...+ ..++.....+..|++.|++|||++ |||||||||+||+++.+|.+|++|||
T Consensus 1306 Rekv~IFMEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1306 REKVYIFMEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred HHHHHHHHHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeeccc
Confidence 999999999999999999998753 366777788999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccC---CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHH
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMT---KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHL 1000 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~ 1000 (1117)
.|..+...............||+.|||||++.+. ....++||||+|||+.||+||++||.....+ ...+-...
T Consensus 1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne----~aIMy~V~ 1455 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE----WAIMYHVA 1455 (1509)
T ss_pred ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch----hHHHhHHh
Confidence 9998865432223344567899999999999754 3567999999999999999999999643221 11111111
Q ss_pred hcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1001 KSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1001 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
... .|.++......-..+++. |+..||+.|.++.|+++
T Consensus 1456 ~gh-------~Pq~P~~ls~~g~dFle~------Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1456 AGH-------KPQIPERLSSEGRDFLEH------CLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ccC-------CCCCchhhhHhHHHHHHH------HHhcCchhhhHHHHHHH
Confidence 111 133444445555666666 99999999988876655
No 255
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.5e-33 Score=313.82 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=197.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+.|.....||+|+||.||++.. .++..||||++........+.+.+|+.+++.++||||+++++.+...+..++||||+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 3445557799999999999975 468899999987655445667889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++... .+++.++..++.|++.|++|||++ +|+||||||+||++++++.++|+|||++.......
T Consensus 102 ~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-- 172 (292)
T cd06658 102 EGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-- 172 (292)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--
Confidence 999999988643 378999999999999999999999 99999999999999999999999999987654321
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......|+..|+|||......++.++||||||+++|||++|+.||..... ...+........ .... .
T Consensus 173 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~~--~~~~---~ 240 (292)
T cd06658 173 --PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP-----LQAMRRIRDNLP--PRVK---D 240 (292)
T ss_pred --ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcCC--Cccc---c
Confidence 122345689999999999888999999999999999999999999964211 111111111110 0000 0
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
....+..+..++.. |+..+|.+||++.++++.
T Consensus 241 ~~~~~~~~~~li~~------~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 SHKVSSVLRGFLDL------MLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccCHHHHHHHHH------HccCChhHCcCHHHHhhC
Confidence 11223345555555 999999999999999873
No 256
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.3e-33 Score=311.64 Aligned_cols=259 Identities=27% Similarity=0.406 Sum_probs=198.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCc----EEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGL----TVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
.+|+..+.||+|+||.||+|.+. +|+ .||+|.+..... ....++.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46788899999999999999753 343 578898865432 2234688999999999999999999988754 4679
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
++||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccccc
Confidence 999999999999987643 3478999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
..... .......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ...... .........
T Consensus 161 ~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~----~~~~~~~~~- 231 (303)
T cd05110 161 GDEKE--YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPD----LLEKGERLP- 231 (303)
T ss_pred Ccccc--cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHH----HHHCCCCCC-
Confidence 32211 11223345778999999998899999999999999999997 999986421 112222 222221111
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEP 1060 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~ 1060 (1117)
.+...+..+.+ ++..||..+|++||+++++++.++++...+
T Consensus 232 -----~~~~~~~~~~~------li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 232 -----QPPICTIDVYM------VMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred -----CCCCCCHHHHH------HHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 11112223333 444599999999999999999999876543
No 257
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.2e-33 Score=305.32 Aligned_cols=249 Identities=24% Similarity=0.365 Sum_probs=199.3
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
++|++.+.||+|+||.||+|...+ ++.||+|.+..... .+++.+|++++++++||||+++++++.+....+++|||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578889999999999999998654 78999999875433 678999999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++.... ..+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~-- 153 (256)
T cd06612 81 GAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM-- 153 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc--
Confidence 9999999986533 3489999999999999999999999 99999999999999999999999999998765422
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......++..|+|||++.+..++.++||||||+++|||++|+.||....+. .......... . ... ..
T Consensus 154 --~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~--~-~~~--~~ 221 (256)
T cd06612 154 --AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM-----RAIFMIPNKP--P-PTL--SD 221 (256)
T ss_pred --cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh-----hhhhhhccCC--C-CCC--Cc
Confidence 1223445788999999999889999999999999999999999999643221 1111100000 0 000 01
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
....+..+.+++. .|++.+|++||++.++++
T Consensus 222 ~~~~~~~~~~~i~------~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 222 PEKWSPEFNDFVK------KCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhhcCHHHHHHHH------HHHhcChhhCcCHHHHhc
Confidence 1122234444444 499999999999999876
No 258
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9e-33 Score=303.11 Aligned_cols=247 Identities=29% Similarity=0.446 Sum_probs=195.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
++|++.+.||+|+||.||++.. +++.||+|+++... ..+.+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 3588899999999999999875 67889999986542 346789999999999999999999988654 5799999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---- 153 (254)
T cd05083 82 KGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---- 153 (254)
T ss_pred CCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence 9999999876432 3478999999999999999999998 9999999999999999999999999999764321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
......+..|+|||.+....++.++||||||+++|||++ |+.||.... ..+.... ...... . ..
T Consensus 154 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~-~~~~~~-~-----~~ 218 (254)
T cd05083 154 ---VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----LKEVKEC-VEKGYR-M-----EP 218 (254)
T ss_pred ---CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHH-HhCCCC-C-----CC
Confidence 112234568999999988899999999999999999998 999986421 1122221 111111 0 11
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
....+..+.+++. .|++.+|++||+++++++.+++
T Consensus 219 ~~~~~~~~~~li~------~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 PEGCPADVYVLMT------SCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCcCCHHHHHHHH------HHcCCChhhCcCHHHHHHHHcc
Confidence 1222334444444 4999999999999999998753
No 259
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.2e-32 Score=304.33 Aligned_cols=251 Identities=27% Similarity=0.399 Sum_probs=194.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc-----cchHHHHHHHHHHhccCCCCcceEEeeeecC--Cce
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK-----ISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 847 (1117)
.+|+..+.||+|+||.||+|.. .+++.||+|++..... .....+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999975 4588999998864321 1234688899999999999999999987653 567
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
+++|||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999987542 378899999999999999999998 999999999999999999999999999976
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
....... ........++..|+|||++....++.++||||+||++|||++|+.||.... ....+.......
T Consensus 156 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~-----~~~~~~~~~~~~---- 225 (266)
T cd06651 156 LQTICMS-GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE-----AMAAIFKIATQP---- 225 (266)
T ss_pred ccccccc-CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc-----hHHHHHHHhcCC----
Confidence 5321111 111223468899999999998889999999999999999999999996421 112222111111
Q ss_pred cccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1008 EVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1008 ~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+.++...+..++.++ .||..+|++||++++|++
T Consensus 226 --~~~~~~~~~~~~~~~li-------~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 --TNPQLPSHISEHARDFL-------GCIFVEARHRPSAEELLR 260 (266)
T ss_pred --CCCCCchhcCHHHHHHH-------HHhcCChhhCcCHHHHhc
Confidence 12333333334444444 388899999999999975
No 260
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8.5e-33 Score=307.01 Aligned_cols=246 Identities=28% Similarity=0.426 Sum_probs=200.1
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+|++.+.||.|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5788899999999999999754 68899999987543 334467889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++... .+++..+..++.|++.|++|||++ +++||||+|+||++++++.++++|||+++......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 82 GGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 999999998764 489999999999999999999999 99999999999999999999999999998775432
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......+++.|+|||++.+..++.++||||||+++|||++|+.||....+ ........... . +.+
T Consensus 153 --~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~--~-----~~~ 218 (274)
T cd06609 153 --SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFLIPKNN--P-----PSL 218 (274)
T ss_pred --cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHHhhhcC--C-----CCC
Confidence 123345688899999999988899999999999999999999999964321 11111111111 1 111
Q ss_pred CCC-CchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1015 QGH-PDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1015 ~~~-~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
... .+..+.+++.. |+..+|++||+++++++
T Consensus 219 ~~~~~~~~~~~~l~~------~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 219 EGNKFSKPFKDFVSL------CLNKDPKERPSAKELLK 250 (274)
T ss_pred cccccCHHHHHHHHH------HhhCChhhCcCHHHHhh
Confidence 111 33445555554 99999999999999977
No 261
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.8e-33 Score=311.43 Aligned_cols=247 Identities=28% Similarity=0.394 Sum_probs=196.9
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 355667899999999999975 457899999987442 333457899999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++... .+++..+..++.|+++|++|||++ +++|+||+|+||++++++.++++|||+++......
T Consensus 85 ~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06642 85 GGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence 999999988643 388999999999999999999998 99999999999999999999999999998664321
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......++..|+|||++.+..++.++||||||+++|||++|+.||....+. ..... .... ..+.+
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~-~~~~------~~~~~ 221 (277)
T cd06642 156 --IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-----RVLFL-IPKN------SPPTL 221 (277)
T ss_pred --hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-----hHHhh-hhcC------CCCCC
Confidence 1222346888999999999889999999999999999999999998643221 11111 1111 11222
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
....+..+.+++. .|++.+|++||++.++++.
T Consensus 222 ~~~~~~~~~~li~------~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 EGQYSKPFKEFVE------ACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHH------HHccCCcccCcCHHHHHHh
Confidence 2333334455544 4999999999999999873
No 262
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.5e-33 Score=311.40 Aligned_cols=199 Identities=27% Similarity=0.366 Sum_probs=169.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
++|++.+.||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888999999999999999754 68899999987543 22344678899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
++ ++|..++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||+++......
T Consensus 86 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 158 (301)
T cd07873 86 LD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT- 158 (301)
T ss_pred cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-
Confidence 97 58888876542 3478999999999999999999999 99999999999999999999999999997653321
Q ss_pred CccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......+++.|+|||++.+ ..++.++|||||||++|||++|++||..
T Consensus 159 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~ 207 (301)
T cd07873 159 ---KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPG 207 (301)
T ss_pred ---CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11223457899999998765 4578899999999999999999999965
No 263
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-32 Score=302.83 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=197.5
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecC-CceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANR-KTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~e 852 (1117)
+|++.+.||+|+||.||++..+ +++.||+|++.... ....+.+.+|++++++++|||++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999754 57899999986532 23345688999999999999999999887644 45789999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999987643 23489999999999999999999999 99999999999999999999999999998764321
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
.......+++.|+|||+.....++.++||||+|+++|||++|+.||... .............. +
T Consensus 157 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~-----~~~~~~~~~~~~~~-------~ 220 (257)
T cd08223 157 ----DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK-----DMNSLVYRIIEGKL-------P 220 (257)
T ss_pred ----CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhcCC-------C
Confidence 1223456889999999999999999999999999999999999998642 11222222222111 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+...+..+.+++.. |++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~li~~------~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 PMPKDYSPELGELIAT------MLSKRPEKRPSVKSILR 253 (257)
T ss_pred CCccccCHHHHHHHHH------HhccCcccCCCHHHHhc
Confidence 1222334455555554 99999999999999876
No 264
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.1e-32 Score=302.69 Aligned_cols=249 Identities=24% Similarity=0.351 Sum_probs=200.0
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||++.. .+|+.||+|++... .....+++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478889999999999999874 46899999998743 223345789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++..... ..+++.++.+++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~- 155 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV- 155 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-
Confidence 999999998875432 2378999999999999999999998 99999999999999999999999999998664321
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.......|++.|+|||+..+..++.++|||||||++|+|++|+.||... .....+........ +.
T Consensus 156 ---~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~~~-------~~ 220 (256)
T cd08218 156 ---ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKIIRGSY-------PP 220 (256)
T ss_pred ---hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHhcCCC-------CC
Confidence 1122346888999999999888999999999999999999999998632 22233333322221 11
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+...+..+..+++. |++.+|++||++.+|++
T Consensus 221 ~~~~~~~~~~~li~~------~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 221 VSSHYSYDLRNLVSQ------LFKRNPRDRPSVNSILE 252 (256)
T ss_pred CcccCCHHHHHHHHH------HhhCChhhCcCHHHHhh
Confidence 222333445555554 99999999999999986
No 265
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.9e-33 Score=307.28 Aligned_cols=251 Identities=29% Similarity=0.437 Sum_probs=202.8
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+|+..+.||+|+||.||++..+ +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777889999999999999865 68999999987653 334567889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHH-DCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
++++|.+++.... ..+++..+.+++.|+++|++|+|+ . +++||||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~- 155 (265)
T cd06605 82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL- 155 (265)
T ss_pred CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH-
Confidence 9999999997653 348899999999999999999999 7 99999999999999999999999999987654321
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
.....++..|+|||...+..++.++||||||+++|+|++|+.||...........+.+........ +.
T Consensus 156 -----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~ 223 (265)
T cd06605 156 -----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP-------PR 223 (265)
T ss_pred -----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC-------CC
Confidence 112578899999999998899999999999999999999999996543222334444443332221 11
Q ss_pred cCCC-CchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1014 LQGH-PDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1014 l~~~-~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
++.. .+..+.+++.. |+..+|++||++.+++.
T Consensus 224 ~~~~~~~~~~~~li~~------~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 224 LPSGKFSPDFQDFVNL------CLIKDPRERPSYKELLE 256 (265)
T ss_pred CChhhcCHHHHHHHHH------HcCCCchhCcCHHHHhh
Confidence 1111 33445555554 99999999999999976
No 266
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-33 Score=322.78 Aligned_cols=192 Identities=26% Similarity=0.352 Sum_probs=164.2
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
...+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++...+..++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3467999999999999999999864 5788999975432 34569999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+. ++|.+++.... ..+++..+.+++.||+.||+|||++ +||||||||+||+++.++.+||+|||+++.....
T Consensus 138 ~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 210 (357)
T PHA03209 138 HYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA- 210 (357)
T ss_pred ccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC-
Confidence 995 57877776532 3489999999999999999999999 9999999999999999999999999999754321
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCC
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPV 982 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~ 982 (1117)
.......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 ----PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ----cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223457899999999999899999999999999999999865554
No 267
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.3e-33 Score=305.29 Aligned_cols=253 Identities=26% Similarity=0.345 Sum_probs=199.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
++|++.+.||+|+||.||+|... +++.+|+|++........+.+.+|++++++++||||+++++++.+.+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 56888899999999999999754 57899999998765556678999999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++.... ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||.+.......
T Consensus 83 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 155 (262)
T cd06613 83 GGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-- 155 (262)
T ss_pred CCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh--
Confidence 9999999887642 3488999999999999999999999 99999999999999999999999999997654321
Q ss_pred ccccCCccccccccCChhhhccC---CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 935 SFSANPQFAGSYGYIAPEYANMT---KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
.......++..|+|||.+... .++.++||||||+++|||++|+.||....+ .................
T Consensus 156 --~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~-- 226 (262)
T cd06613 156 --AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP-----MRALFLISKSNFPPPKL-- 226 (262)
T ss_pred --hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhccCCCccc--
Confidence 122345688899999998776 889999999999999999999999964321 11111111111011000
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
......+..+.+ ++.+|+..+|.+||++.+|+.
T Consensus 227 -~~~~~~~~~~~~------li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 -KDKEKWSPVFHD------FIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -cchhhhhHHHHH------HHHHHcCCChhhCCCHHHHhc
Confidence 001111223334 445599999999999999875
No 268
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.9e-33 Score=316.99 Aligned_cols=201 Identities=21% Similarity=0.238 Sum_probs=165.7
Q ss_pred CCCeeeec--CCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 780 AGNIIGQG--RSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 780 ~~~~lg~G--~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+.++||+| +|++||++.. .+|+.||+|++.... ....+.+++|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 7889999874 578999999987542 223356788999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++|+|.+++..... ..+++..+.+++.|++.||+|||++ +|+||||||+||+++.++.++++|||.+.........
T Consensus 82 ~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 99999999875432 2388999999999999999999999 9999999999999999999999999876543321110
Q ss_pred c---cccCCccccccccCChhhhcc--CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 935 S---FSANPQFAGSYGYIAPEYANM--TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 935 ~---~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
. ........++..|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 0 001122356788999999875 4689999999999999999999999964
No 269
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=319.04 Aligned_cols=200 Identities=30% Similarity=0.441 Sum_probs=174.4
Q ss_pred CCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeecC------CceE
Q 001238 777 SLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGANR------KTKL 848 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~ 848 (1117)
.|...+.||+||||.||+|+ ..+|+.||||.++.. .....++..+|++++++++|||||++++.-.+. +...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 35566889999999999998 567999999999764 233456788999999999999999999975543 3568
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc--CCC--cceeccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG--ERY--ESCLADFGL 924 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~--~~~--~~kl~DfGl 924 (1117)
+|||||.+|+|..++.+.+....+++.+.+.+..+++.||.|||++ +||||||||.||++- ++| ..||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999999876666699999999999999999999998 999999999999983 333 468999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
|+.+.++. ....++||..|.+||... .+.|+..+|.|||||++||.+||..||..
T Consensus 171 Arel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 171 ARELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred cccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 99987643 566789999999999988 58899999999999999999999999964
No 270
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.9e-33 Score=314.53 Aligned_cols=195 Identities=27% Similarity=0.351 Sum_probs=170.9
Q ss_pred CCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccC-CC-----CcceEEeeeecCCceEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIR-HR-----NIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~~~l 849 (1117)
+|.+.+.||+|+||.|-++. .++++.||||+++.... -..+-..|+.+|..++ |. |+|+++++|...++.|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 78899999999999999985 56799999999986533 3445667999999996 43 89999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC--Ccceecccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER--YESCLADFGLARL 927 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~--~~~kl~DfGla~~ 927 (1117)
|+|.+ .-+|.++++.+.-.+ ++...++.++.||+.||.+||+. +|||+||||+|||+.+- ..+||+|||.|..
T Consensus 266 VfELL-~~NLYellK~n~f~G-lsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRG-LSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 99999 569999999876555 99999999999999999999999 99999999999999753 4789999999998
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.... .. +.+-+..|+|||++.+.+|+.+.||||||||+.||++|.+-|.+
T Consensus 341 ~~q~------vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 341 ESQR------VY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred cCCc------ce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 7542 11 45667889999999999999999999999999999999887765
No 271
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.1e-32 Score=308.15 Aligned_cols=259 Identities=24% Similarity=0.331 Sum_probs=197.2
Q ss_pred hHHHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeee-----
Q 001238 770 SIGDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGA----- 842 (1117)
Q Consensus 770 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~----- 842 (1117)
++.++.++|++.+.||+|+||.||+|.. .+++.||+|++..... ...++.+|+.+++++ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 4556788999999999999999999975 4588999998865322 245688999999999 6999999999874
Q ss_pred cCCceEEEEEecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecc
Q 001238 843 NRKTKLLFYDYMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLAD 921 (1117)
Q Consensus 843 ~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~D 921 (1117)
..+..++||||+++++|.+++... .....+++..+..++.|+++|+.|||+. +|+||||||+||++++++.++++|
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~d 167 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVD 167 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEcc
Confidence 345689999999999999887642 2234588999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCccccCCccccccccCChhhhcc-----CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHH
Q 001238 922 FGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-----TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 922 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~ 996 (1117)
||+++...... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||..... ...+
T Consensus 168 fg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~-----~~~~ 238 (286)
T cd06638 168 FGVSAQLTSTR----LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP-----MRAL 238 (286)
T ss_pred CCceeecccCC----CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch-----hHHH
Confidence 99998764321 12233468999999998753 4578899999999999999999999864211 1111
Q ss_pred HHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 997 RDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
...... ......+ +...+..+..++. .|++.+|++||++.++++.
T Consensus 239 ~~~~~~--~~~~~~~---~~~~~~~~~~li~------~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 239 FKIPRN--PPPTLHQ---PELWSNEFNDFIR------KCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hhcccc--CCCcccC---CCCcCHHHHHHHH------HHccCCcccCCCHHHHhhc
Confidence 111111 1111111 1112233444444 4999999999999999874
No 272
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.4e-32 Score=307.26 Aligned_cols=199 Identities=26% Similarity=0.394 Sum_probs=171.3
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
++|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999865 58999999986542 2233567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|++++++..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 99999988877543 2389999999999999999999998 99999999999999999999999999998765422
Q ss_pred CCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||.+
T Consensus 155 ~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~ 203 (286)
T cd07847 155 D----DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPG 203 (286)
T ss_pred c----cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 1 1223457889999998865 5578999999999999999999999975
No 273
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=302.13 Aligned_cols=246 Identities=21% Similarity=0.267 Sum_probs=197.7
Q ss_pred ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
.+.|+.-++||+||||.||-+. ..+|+.||.|++.+. .+........|-+++.++..+.||.+--+|...+.+|+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 3567778899999999999976 457999999988543 222333456799999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
+..|.||+|.-++......+ +++..++-+|.+|+.||++||.. +||+||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~~g-F~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPG-FDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCCCC-CchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999998876544 99999999999999999999999 999999999999999999999999999998865
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
.. .....+||.+|||||++....|+...|.||+||++|||+.|+.||... .... -.+.+.+.....
T Consensus 340 g~-----~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~-KeKv-k~eEvdrr~~~~------- 405 (591)
T KOG0986|consen 340 GK-----PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR-KEKV-KREEVDRRTLED------- 405 (591)
T ss_pred CC-----ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh-hhhh-hHHHHHHHHhcc-------
Confidence 43 233458999999999999999999999999999999999999999642 1111 111222222211
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCC
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRP 1044 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP 1044 (1117)
...++..+++..+.+.+. -++.||++|-
T Consensus 406 ~~ey~~kFS~eakslc~~------LL~Kdp~~RL 433 (591)
T KOG0986|consen 406 PEEYSDKFSEEAKSLCEG------LLTKDPEKRL 433 (591)
T ss_pred hhhcccccCHHHHHHHHH------HHccCHHHhc
Confidence 123445556666666665 6677888885
No 274
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.1e-32 Score=299.58 Aligned_cols=248 Identities=27% Similarity=0.400 Sum_probs=194.7
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCChh
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLG 860 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 860 (1117)
++||+|+||.||++...+++.||+|+++..... ..+.+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999998766999999998765433 4567899999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCC
Q 001238 861 MLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANP 940 (1117)
Q Consensus 861 ~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 940 (1117)
+++.... ..+++..+..++.+++.|++|||++ +++||||||+||+++.++.++|+|||+++....... .....
T Consensus 81 ~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~ 153 (251)
T cd05041 81 TFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY--TVSDG 153 (251)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcc--eeccc
Confidence 9986542 2478999999999999999999999 999999999999999999999999999986542111 11111
Q ss_pred ccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 941 QFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 941 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
...++..|+|||.+.+..++.++||||||+++|||++ |..||..... ...... ....... ..+...+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--~~~~~~----~~~~~~~------~~~~~~~ 221 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQTRER----IESGYRM------PAPQLCP 221 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--HHHHHH----HhcCCCC------CCCccCC
Confidence 2234677999999988899999999999999999999 8888864211 111111 1111100 1112223
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
..+.+++. .|+..+|++||++.++++.|+
T Consensus 222 ~~~~~li~------~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLML------QCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHH------HHhccChhhCcCHHHHHHHhh
Confidence 34444444 499999999999999999885
No 275
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.1e-32 Score=300.78 Aligned_cols=247 Identities=30% Similarity=0.422 Sum_probs=198.2
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-----ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-----KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
+|+..+.||+|+||+||+|... +++.||+|.+.... +...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999865 78999999986543 22345788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++++|.+++... +.+++..+..++.|+++|++|||+. +|+|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999998764 2378999999999999999999999 999999999999999999999999999887543
Q ss_pred CCCCccccCCccccccccCChhhhccCC-CCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTK-ISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||.... ............ ..
T Consensus 155 ~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~-~~--- 220 (258)
T cd06632 155 FS-----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE-----GVAAVFKIGRSK-EL--- 220 (258)
T ss_pred cc-----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc-----HHHHHHHHHhcc-cC---
Confidence 22 223456889999999987766 8999999999999999999999996432 111111111101 11
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+.++...+..+.++++. |++.+|++||++.+++.
T Consensus 221 --~~~~~~~~~~~~~li~~------~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 --PPIPDHLSDEAKDFILK------CLQRDPSLRPTAAELLE 254 (258)
T ss_pred --CCcCCCcCHHHHHHHHH------HhhcCcccCcCHHHHhc
Confidence 12223334455555554 99999999999999875
No 276
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.2e-32 Score=312.94 Aligned_cols=197 Identities=25% Similarity=0.374 Sum_probs=159.9
Q ss_pred CCeeeecCCeEEEEEEcC---CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeec--CCceEEEEEecC
Q 001238 781 GNIIGQGRSGIVYKVTLP---SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGAN--RKTKLLFYDYMP 855 (1117)
Q Consensus 781 ~~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~~ 855 (1117)
+.+||+|+||+||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. ....++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 467999999999999854 45789999987543 23467899999999999999999998753 456789999986
Q ss_pred CCChhhhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEE----cCCCcceecccccc
Q 001238 856 NGTLGMLLHDG------ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILL----GERYESCLADFGLA 925 (1117)
Q Consensus 856 ~gsL~~~l~~~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill----~~~~~~kl~DfGla 925 (1117)
+ +|.+++... .....+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 676665421 1123488999999999999999999999 99999999999999 46679999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+....... .........||+.|+|||++.+ ..++.++|||||||++|||++|++||..
T Consensus 160 ~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLK-PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCcc-cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 87654321 1122345678999999998876 4588999999999999999999999964
No 277
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.3e-32 Score=303.25 Aligned_cols=254 Identities=29% Similarity=0.473 Sum_probs=195.9
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCcc----------chHHHHHHHHHHhccCCCCcceEEeeeecCC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKI----------STGAFSSEIATLSRIRHRNIVRLLGWGANRK 845 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 845 (1117)
+|.+.+.||+|+||.||+|.. .+|+.||+|.++..... ..+.+.+|++++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 477889999999999999974 46899999988642110 1235788999999999999999999999999
Q ss_pred ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
..++||||+++++|.+++... +.+++..+..++.|++.|+.|||++ +++||||||+||+++.++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999998765 3488999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhccCC--CCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANMTK--ISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSK 1003 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 1003 (1117)
+....... ........|+..|+|||.+.... ++.++||||||+++||+++|+.||... ... ..........
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~----~~~-~~~~~~~~~~ 228 (272)
T cd06629 156 KKSDDIYD--NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE----EAI-AAMFKLGNKR 228 (272)
T ss_pred cccccccc--ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc----chH-HHHHHhhccc
Confidence 76543211 11223456889999999987654 789999999999999999999998532 111 1111111111
Q ss_pred CCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1004 KDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1004 ~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
....+.+......+..+.+++.. |++.+|++||++.+|++
T Consensus 229 --~~~~~~~~~~~~~~~~~~~li~~------~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 229 --SAPPIPPDVSMNLSPVALDFLNA------CFTINPDNRPTARELLQ 268 (272)
T ss_pred --cCCcCCccccccCCHHHHHHHHH------HhcCChhhCCCHHHHhh
Confidence 11111122222233445555554 99999999999999876
No 278
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.7e-32 Score=303.79 Aligned_cols=254 Identities=25% Similarity=0.421 Sum_probs=197.2
Q ss_pred CCCCCCeeeecCCeEEEEEEcCC--CcEEEEEEeecCC----------ccchHHHHHHHHHHhc-cCCCCcceEEeeeec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPS--GLTVAVKRFRASD----------KISTGAFSSEIATLSR-IRHRNIVRLLGWGAN 843 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~ 843 (1117)
+|++.+.||+|+||.||+|.... ++.||+|.+.... .....++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999998654 6889999885321 1223456778888765 799999999999999
Q ss_pred CCceEEEEEecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccc
Q 001238 844 RKTKLLFYDYMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADF 922 (1117)
Q Consensus 844 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 922 (1117)
.+..++||||+++++|.+++... .....+++..+++++.|++.|+.|||+.. +++||||||+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999887542 12235889999999999999999999631 8999999999999999999999999
Q ss_pred cccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhc
Q 001238 923 GLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKS 1002 (1117)
Q Consensus 923 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~ 1002 (1117)
|.+....... ......|+..|+|||......++.++||||||+++|||++|+.||... ............
T Consensus 159 g~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-----~~~~~~~~~~~~ 228 (269)
T cd08528 159 GLAKQKQPES-----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST-----NMLSLATKIVEA 228 (269)
T ss_pred cceeeccccc-----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc-----CHHHHHHHHhhc
Confidence 9998754321 223456889999999999888999999999999999999999998642 122222222221
Q ss_pred CCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1003 KKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1003 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
... +......+..+.++++ +|++.+|++||++.|+.++++
T Consensus 229 ~~~------~~~~~~~~~~l~~li~------~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 VYE------PLPEGMYSEDVTDVIT------SCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCC------cCCcccCCHHHHHHHH------HHCCCCCccCCCHHHHHHHhc
Confidence 111 1111122334555554 499999999999999999875
No 279
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.8e-32 Score=299.84 Aligned_cols=251 Identities=30% Similarity=0.453 Sum_probs=197.7
Q ss_pred CCCCCeeeecCCeEEEEEEcCC-----CcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPS-----GLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
+++.+.||+|+||.||++...+ +..||+|+++..... ..+.+..|+++++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 4567899999999999998643 488999999755432 4668999999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++++|.+++....... +++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++.....
T Consensus 81 e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKE-LSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 9999999999997653221 89999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
... ......+++.|+|||.+....++.++||||+|+++|||++ |+.||... . ............ ..
T Consensus 157 ~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--~---~~~~~~~~~~~~-~~---- 223 (258)
T smart00219 157 DYY---KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--S---NEEVLEYLKKGY-RL---- 223 (258)
T ss_pred ccc---ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--C---HHHHHHHHhcCC-CC----
Confidence 211 1112237789999999988889999999999999999998 88888641 1 122222222111 11
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
..+...+..+.+++. .|+..+|++||++.++++.|
T Consensus 224 --~~~~~~~~~~~~~i~------~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 --PKPENCPPEIYKLML------QCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --CCCCcCCHHHHHHHH------HHCcCChhhCcCHHHHHhhC
Confidence 111223334444444 49999999999999998754
No 280
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1e-32 Score=306.81 Aligned_cols=247 Identities=25% Similarity=0.375 Sum_probs=197.6
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 5677789999999999999754 58899999987543 334567889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++|+|.+++... .+++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06640 85 GGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence 999999988653 378899999999999999999999 99999999999999999999999999997664321
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......++..|+|||++.+..++.++|||||||++|||++|+.||....+. ...... ... . .+.+
T Consensus 156 --~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~-~~~-~-----~~~~ 221 (277)
T cd06640 156 --IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLI-PKN-N-----PPTL 221 (277)
T ss_pred --cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhh-hcC-C-----CCCC
Confidence 1223346788999999998888999999999999999999999999643211 111111 111 0 1122
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
....+..+.+++ ..|++.+|++||++.++++.
T Consensus 222 ~~~~~~~~~~li------~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 222 TGEFSKPFKEFI------DACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred chhhhHHHHHHH------HHHcccCcccCcCHHHHHhC
Confidence 222333444444 45999999999999999764
No 281
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.2e-32 Score=301.92 Aligned_cols=252 Identities=29% Similarity=0.462 Sum_probs=198.7
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCcc--chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKI--STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||+|.. .+++.||+|.++..... ..+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 478889999999999999975 46899999998765442 456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++... +.+++..+..++.|+++|++|||+. +|+||||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHG---RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 9999999998764 2378899999999999999999999 999999999999999999999999999987654322
Q ss_pred CccccCCccccccccCChhhhccCC---CCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTK---ISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
..........+++.|+|||++.... ++.++||||||+++||+++|+.||..... ....... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~----~~~~~~~-~~~~~------ 223 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN----EFQIMFH-VGAGH------ 223 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc----hHHHHHH-HhcCC------
Confidence 1111122356789999999988766 88999999999999999999999964321 1111111 11111
Q ss_pred CcccCCCC--chhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGHP--DTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~--~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+.++... +..+.++++ .|++.+|++||++.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~li~------~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 KPPIPDSLQLSPEGKDFLD------RCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCCcccccCHHHHHHHH------HHccCCcccCCCHHHHhc
Confidence 11112211 334445444 499999999999999864
No 282
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.3e-32 Score=301.94 Aligned_cols=251 Identities=26% Similarity=0.377 Sum_probs=192.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc-----cchHHHHHHHHHHhccCCCCcceEEeeeecC--Cce
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK-----ISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 847 (1117)
.+|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999975 4589999998864321 1234688899999999999999999988764 457
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++++|.+++... +.+++..+.+++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 8999999999999998754 2378889999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
...... .........++..|+|||++....++.++||||||+++|||++|+.||... .....+.......
T Consensus 156 ~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~-----~~~~~~~~~~~~~---- 225 (265)
T cd06652 156 LQTICL-SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF-----EAMAAIFKIATQP---- 225 (265)
T ss_pred cccccc-cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc-----chHHHHHHHhcCC----
Confidence 532111 111223456889999999998888999999999999999999999999642 1111122211111
Q ss_pred cccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1008 EVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1008 ~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+..+...+..+..++.. |+. +|++||+++++++
T Consensus 226 --~~~~~~~~~~~~~~~~i~~------~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 --TNPVLPPHVSDHCRDFLKR------IFV-EAKLRPSADELLR 260 (265)
T ss_pred --CCCCCchhhCHHHHHHHHH------Hhc-ChhhCCCHHHHhc
Confidence 0122222233344444444 664 8999999999875
No 283
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.9e-32 Score=310.89 Aligned_cols=255 Identities=24% Similarity=0.303 Sum_probs=198.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCcc---chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKI---STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||+||+|... +++.||+|.+...... ..+.+..|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999764 5899999999765322 3456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++++|.+++.... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987543 24589999999999999999999999 9999999999999999999999999998765332
Q ss_pred CCCc-------------------------cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCC
Q 001238 932 SGGS-------------------------FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASF 986 (1117)
Q Consensus 932 ~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~ 986 (1117)
.... ........||..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1100 001123468999999999998889999999999999999999999996432
Q ss_pred CCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCC----HHHHHH
Q 001238 987 PDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPT----MKDVAA 1051 (1117)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs----~~~v~~ 1051 (1117)
. .............. +. ....+..+.++++. |++.+|++||+ +.++++
T Consensus 237 ~-----~~~~~~~~~~~~~~-----~~-~~~~~~~~~~li~~------~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 R-----DETFSNILKKEVTF-----PG-SPPVSSSARDLIRK------LLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred h-----HHHHHHHhcCCccC-----CC-ccccCHHHHHHHHH------HccCCHhHCCCchhhHHHHHc
Confidence 1 11112222111110 00 01133455565555 99999999999 555544
No 284
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=282.41 Aligned_cols=249 Identities=25% Similarity=0.413 Sum_probs=198.1
Q ss_pred CCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC-CccchHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEEEEec
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS-DKISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.+....||.|..|.||+++.+ +|...|||.+.+. .+.+.+++...+.++.+-. .|+||+.+|||......++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 445567999999999999754 5889999998765 4555677888888877664 899999999999999999999998
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
. .-.+.++++.. +++++..+-++...+.+||.||-+++ +|+|||+||+|||+|+.|.+|+||||++..+.+.
T Consensus 174 s-~C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS--- 245 (391)
T KOG0983|consen 174 S-TCAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS--- 245 (391)
T ss_pred H-HHHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc---
Confidence 4 34566666543 34888888999999999999999875 9999999999999999999999999999877653
Q ss_pred ccccCCccccccccCChhhhc---cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 935 SFSANPQFAGSYGYIAPEYAN---MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
.+.+..+|-+.|||||.+. ...|+-++||||||++++|++||+.||..- ....+.+...+...+ ..++
T Consensus 246 --kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c----~tdFe~ltkvln~eP---P~L~ 316 (391)
T KOG0983|consen 246 --KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC----KTDFEVLTKVLNEEP---PLLP 316 (391)
T ss_pred --cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC----CccHHHHHHHHhcCC---CCCC
Confidence 3445668999999999885 457899999999999999999999999652 223344444444332 2222
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+... ++...+++++. |+..|+.+||.+.++++
T Consensus 317 ~~~g--FSp~F~~fv~~------CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 317 GHMG--FSPDFQSFVKD------CLTKDHRKRPKYNKLLE 348 (391)
T ss_pred cccC--cCHHHHHHHHH------HhhcCcccCcchHHHhc
Confidence 2222 55567777766 99999999999999876
No 285
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6.7e-33 Score=330.82 Aligned_cols=197 Identities=20% Similarity=0.236 Sum_probs=163.5
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCC------CCcceEEeeeecC-
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRH------RNIVRLLGWGANR- 844 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~~~~~~~- 844 (1117)
..+++|++.++||+|+||+||+|.. ..++.||||+++.... ....+..|+++++.++| .+++++++++...
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 4467899999999999999999975 4588999999975322 23456678888877755 4588899988764
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCceeeeccccCeEEEcCCC--------
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHH-DCVPAILHRDVKSHNILLGERY-------- 915 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivHrDlkp~Nill~~~~-------- 915 (1117)
.+.|+|||++ +++|.+++... +.+++..+..++.||+.||+|||+ . +||||||||+|||++.++
T Consensus 205 ~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 205 GHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred ceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccccc
Confidence 5688999988 77888877654 348999999999999999999997 5 899999999999998765
Q ss_pred --------cceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 916 --------ESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 916 --------~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.+||+|||.+..... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||+.
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~~-------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDERH-------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred cccCCCCceEEECCCCccccCcc-------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 489999998864321 23356899999999999999999999999999999999999999975
No 286
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-32 Score=309.06 Aligned_cols=248 Identities=22% Similarity=0.361 Sum_probs=197.0
Q ss_pred CCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 778 LTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
|.....||+|+||.||+|.. .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 33445799999999999975 46899999998765555566788999999999999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
++|..++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 103 ~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---- 171 (297)
T cd06659 103 GALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---- 171 (297)
T ss_pred CCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc----
Confidence 9999887653 388999999999999999999999 99999999999999999999999999987654321
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||.... . ...+... ....... .....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--~---~~~~~~~-~~~~~~~----~~~~~ 241 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--P---VQAMKRL-RDSPPPK----LKNAH 241 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--H---HHHHHHH-hccCCCC----ccccC
Confidence 12234578999999999998899999999999999999999999996421 1 1111111 1111110 01111
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
..+..+.++++. |++.+|++||++.++++.
T Consensus 242 ~~~~~l~~~i~~------~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 242 KISPVLRDFLER------MLTREPQERATAQELLDH 271 (297)
T ss_pred CCCHHHHHHHHH------HhcCCcccCcCHHHHhhC
Confidence 223345555554 999999999999999884
No 287
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.7e-32 Score=303.76 Aligned_cols=250 Identities=29% Similarity=0.447 Sum_probs=192.8
Q ss_pred CeeeecCCeEEEEEEcCC-------CcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 782 NIIGQGRSGIVYKVTLPS-------GLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+.||+|+||.||+|+..+ ++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999997542 2579999886542 23456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC-----cceeccccc
Q 001238 854 MPNGTLGMLLHDGE----CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY-----ESCLADFGL 924 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-----~~kl~DfGl 924 (1117)
+++++|.+++.... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999987532 123478899999999999999999998 999999999999999877 899999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSK 1003 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~ 1003 (1117)
++....... ........++..|+|||++....++.++||||||+++|||++ |+.||... ........ ....
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~--~~~~~~~~----~~~~ 229 (269)
T cd05044 158 ARDIYKSDY--YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL--NNQEVLQH----VTAG 229 (269)
T ss_pred ccccccccc--cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCccc--CHHHHHHH----HhcC
Confidence 986543211 112223345788999999999999999999999999999998 99998642 11111111 1111
Q ss_pred CCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1004 KDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1004 ~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
... ......+..+.+++. .|+..+|++||+++++.+.|+
T Consensus 230 ~~~------~~~~~~~~~~~~li~------~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 GRL------QKPENCPDKIYQLMT------NCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred Ccc------CCcccchHHHHHHHH------HHcCCCcccCCCHHHHHHHHh
Confidence 100 111222334444444 599999999999999999885
No 288
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.8e-33 Score=306.79 Aligned_cols=239 Identities=21% Similarity=0.338 Sum_probs=185.8
Q ss_pred CeeeecCCeEEEEEEcCC--------CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 782 NIIGQGRSGIVYKVTLPS--------GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+.||+|+||.||+|.... ...||+|.+........+++.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999997532 235888888655444556788999999999999999999999998999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc--------ceecccccc
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE--------SCLADFGLA 925 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~--------~kl~DfGla 925 (1117)
+++|+|.++++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++. ++++|||++
T Consensus 81 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 81 VKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred CCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 99999999997653 2488999999999999999999999 9999999999999988765 589999988
Q ss_pred ccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCC-CCCCCCCCCChhHHHHHHHHHhcC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGK-KPVDASFPDGQHVIQWVRDHLKSK 1003 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~-~P~~~~~~~~~~~~~~~~~~~~~~ 1003 (1117)
..... .....++..|+|||++.+ ..++.++||||||+++|||++|. .||.... . ..... .....
T Consensus 156 ~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~---~--~~~~~-~~~~~ 221 (258)
T cd05078 156 ITVLP--------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD---S--QKKLQ-FYEDR 221 (258)
T ss_pred cccCC--------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc---H--HHHHH-HHHcc
Confidence 65432 223467889999999876 45789999999999999999985 5554311 1 11111 11111
Q ss_pred CCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1004 KDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1004 ~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
..++......+.+++. .|++.+|++||+++++++.|
T Consensus 222 --------~~~~~~~~~~~~~li~------~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 222 --------HQLPAPKWTELANLIN------QCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred --------ccCCCCCcHHHHHHHH------HHhccChhhCCCHHHHHHhc
Confidence 1112222234444444 49999999999999999876
No 289
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.4e-32 Score=302.03 Aligned_cols=256 Identities=24% Similarity=0.396 Sum_probs=193.8
Q ss_pred CCCCCeeeecCCeEEEEEEcC----CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCC------
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP----SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRK------ 845 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 845 (1117)
|++.+.||+|+||.||+|.+. +++.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999743 46899999987542 233557889999999999999999999876532
Q ss_pred ceEEEEEecCCCChhhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGE---CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADF 922 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 922 (1117)
..++++||+++|+|.+++.... ....+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2378899999999988775321 112478899999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHh
Q 001238 923 GLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLK 1001 (1117)
Q Consensus 923 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~ 1001 (1117)
|.++....... ........+++.|++||......++.++||||||+++|||++ |+.||.... ......++ .
T Consensus 158 g~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~--~~~~~~~~---~- 229 (273)
T cd05074 158 GLSKKIYSGDY--YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--NSEIYNYL---I- 229 (273)
T ss_pred cccccccCCcc--eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC--HHHHHHHH---H-
Confidence 99986643211 112223345678999999998889999999999999999999 889986421 11121111 1
Q ss_pred cCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhh
Q 001238 1002 SKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREI 1056 (1117)
Q Consensus 1002 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~ 1056 (1117)
..... .........+.+ ++..|++.+|++||++.++++.|+++
T Consensus 230 ~~~~~------~~~~~~~~~~~~------l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 KGNRL------KQPPDCLEDVYE------LMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCcC------CCCCCCCHHHHH------HHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 011112223333 44559999999999999999999875
No 290
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.4e-32 Score=305.91 Aligned_cols=244 Identities=24% Similarity=0.304 Sum_probs=198.3
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999754 68999999987532 223456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++++|.+++... +.+++..+..++.|++.||+|||+. +|+||||+|+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999999998764 3488999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
.....+++.|+|||.+.....+.++||||||+++|+|++|+.||.... ............
T Consensus 155 -------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~-------- 214 (290)
T cd05580 155 -------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEKILEGK-------- 214 (290)
T ss_pred -------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCC--------
Confidence 234468999999999988888999999999999999999999996422 111122222111
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
..++...+..+.++++. |+..+|.+|| +++++.+
T Consensus 215 ~~~~~~~~~~l~~li~~------~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 215 VRFPSFFSPDAKDLIRN------LLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ccCCccCCHHHHHHHHH------HccCCHHHccCcccCCHHHHHc
Confidence 12223334566666665 9999999999 5666643
No 291
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.4e-32 Score=302.38 Aligned_cols=237 Identities=22% Similarity=0.343 Sum_probs=185.1
Q ss_pred CeeeecCCeEEEEEEcCCC-----------cEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 782 NIIGQGRSGIVYKVTLPSG-----------LTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~-----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
+.||+|+||.||+|...+. ..||+|++...... ...+.+|+.++++++||||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 4699999999999986542 25788887654433 6788999999999999999999999888 778999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC-------cceecccc
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY-------ESCLADFG 923 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-------~~kl~DfG 923 (1117)
|||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+|++|||
T Consensus 79 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 999999999999976432 488999999999999999999998 999999999999999887 79999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccC--CCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHH
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMT--KISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHL 1000 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~ 1000 (1117)
+++.... .....++..|+|||++... .++.++||||||+++|||++ |..||..... . .+.....
T Consensus 154 ~a~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--~---~~~~~~~ 220 (259)
T cd05037 154 IPITVLS--------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--S---EKERFYQ 220 (259)
T ss_pred ccccccc--------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--h---hHHHHHh
Confidence 9986543 1223567789999998876 78999999999999999999 5777754321 1 1111111
Q ss_pred hcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1001 KSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1001 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
... . .+......+.+ ++..|+..+|++||++.++++.|
T Consensus 221 ~~~--~-------~~~~~~~~~~~------li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 DQH--R-------LPMPDCAELAN------LINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred cCC--C-------CCCCCchHHHH------HHHHHhccChhhCCCHHHHHHhc
Confidence 110 0 01111123333 44459999999999999999876
No 292
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.2e-32 Score=306.54 Aligned_cols=199 Identities=29% Similarity=0.388 Sum_probs=168.8
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
++|++.+.||+|+||.||+|..+ +++.||||.+...... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999864 6899999998754322 234567899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++ +|.+++.... +.+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~- 157 (291)
T cd07844 85 LDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS- 157 (291)
T ss_pred CCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC-
Confidence 975 8988887543 3488999999999999999999999 99999999999999999999999999987543211
Q ss_pred CccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......++..|+|||++.+ ..++.++||||+|+++|||++|+.||..
T Consensus 158 ---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 206 (291)
T cd07844 158 ---KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPG 206 (291)
T ss_pred ---ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11122346889999998865 5588999999999999999999999964
No 293
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.5e-32 Score=308.19 Aligned_cols=257 Identities=19% Similarity=0.247 Sum_probs=198.9
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
+|++.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6888899999999999999754 57899999987543 2234567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++++|.+++... +.+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||+++......
T Consensus 82 ~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 82 YVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred cCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 99999999999764 3488999999999999999999999 99999999999999999999999999987421110
Q ss_pred CC-----------ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHh
Q 001238 933 GG-----------SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLK 1001 (1117)
Q Consensus 933 ~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 1001 (1117)
.. .........++..|+|||.+....++.++||||||+++|||++|+.||.+. ...+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~-----~~~~~~~~~~~ 230 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-----TPEELFGQVIS 230 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHh
Confidence 00 001112346788999999998888999999999999999999999999642 11222222222
Q ss_pred cCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1002 SKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1002 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
.... .+......+..+.++++. |++.+|++||++.++.+.++.
T Consensus 231 ~~~~-----~~~~~~~~~~~~~~li~~------~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 231 DDIE-----WPEGDEALPADAQDLISR------LLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred cccC-----CCCccccCCHHHHHHHHH------HhccChhhccCccCHHHHHhC
Confidence 1111 111112233445555555 999999999997666666654
No 294
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.9e-32 Score=298.38 Aligned_cols=248 Identities=23% Similarity=0.365 Sum_probs=197.5
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|+..+.||+|+||.||++.. .+++.||+|++.... ......+.+|++++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477889999999999999875 468899999987542 23356788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC-CcceeccccccccccCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER-YESCLADFGLARLVEDDS 932 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfGla~~~~~~~ 932 (1117)
+++++|.+++.... ...+++..+.+++.|+++|++|||++ +|+||||||+||+++++ +.+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999997643 23488999999999999999999999 99999999999999865 457999999998765321
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
......++..|+|||.+....++.++||||||+++|+|++|+.||.... ....+........ .
T Consensus 157 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~-------~ 219 (256)
T cd08220 157 -----KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN-----LPALVLKIMSGTF-------A 219 (256)
T ss_pred -----cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc-----hHHHHHHHHhcCC-------C
Confidence 1223468899999999998889999999999999999999999996421 1122222222111 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.++...+..+.+++.. ||+.+|++||++.++++
T Consensus 220 ~~~~~~~~~l~~li~~------~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 PISDRYSPDLRQLILS------MLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCCCCcCHHHHHHHHH------HccCChhhCCCHHHHhh
Confidence 1122233445555554 99999999999999976
No 295
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.5e-32 Score=298.64 Aligned_cols=251 Identities=26% Similarity=0.428 Sum_probs=204.0
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+|.+.+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++.+++++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 5788899999999999999865 589999999876543 34567999999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHH-DCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+........
T Consensus 82 ~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 82 DGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 999999999764 348999999999999999999999 8 999999999999999999999999999987643221
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
......++..|+|||.+....++.++||||||+++|||++|+.||..... ....+......... .+.
T Consensus 156 ----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~-------~~~ 222 (264)
T cd06623 156 ----QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDGP-------PPS 222 (264)
T ss_pred ----cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcCC-------CCC
Confidence 12245688999999999988999999999999999999999999965322 12222222222111 111
Q ss_pred cCCC-CchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1014 LQGH-PDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1014 l~~~-~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.... .+..+.++++. |++.+|++||++.++++.
T Consensus 223 ~~~~~~~~~l~~li~~------~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 223 LPAEEFSPEFRDFISA------CLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCcccCCHHHHHHHHH------HccCChhhCCCHHHHHhC
Confidence 2222 34456666665 999999999999999873
No 296
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.4e-32 Score=307.03 Aligned_cols=197 Identities=27% Similarity=0.370 Sum_probs=166.2
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999854 68999999987532 22235678899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
++ ++|.+++.... +.+++..++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 153 (284)
T cd07839 81 CD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV- 153 (284)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-
Confidence 97 57777765432 3489999999999999999999999 99999999999999999999999999998654321
Q ss_pred CccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVD 983 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~ 983 (1117)
.......++..|+|||++.+. .++.++|||||||++|||++|+.|+.
T Consensus 154 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~ 201 (284)
T cd07839 154 ---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 201 (284)
T ss_pred ---CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 112234678899999988664 47899999999999999999999864
No 297
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.7e-32 Score=303.97 Aligned_cols=259 Identities=25% Similarity=0.318 Sum_probs=196.3
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecC--CceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 852 (1117)
+|...+.||.|++|.||+|.. .+++.||+|.+..... ....++.+|++++++++||||+++++++.+. +..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 577788999999999999986 4588999999875432 3456789999999999999999999988654 46799999
Q ss_pred ecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 853 YMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 999999998875421 234478899999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
. .....++..|+|||.+....++.++||||+|+++|||++|+.||...........+......... .+....+
T Consensus 159 ~------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 231 (287)
T cd06621 159 L------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP-NPELKDE 231 (287)
T ss_pred c------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC-chhhccC
Confidence 1 12345788999999999899999999999999999999999999754221112222222211111 1100000
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+......+..+.+ ++..|++.+|++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~------li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 PGNGIKWSEEFKD------FIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCCchHHHHHH------HHHHHcCCCcccCCCHHHHHh
Confidence 1101112233344 445599999999999999987
No 298
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.1e-32 Score=305.26 Aligned_cols=254 Identities=23% Similarity=0.359 Sum_probs=195.7
Q ss_pred HHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeec------
Q 001238 772 GDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGAN------ 843 (1117)
Q Consensus 772 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~------ 843 (1117)
......|++.+.||+|+||.||+|.. .+++.||+|++.... ....++..|+.+++++ +||||+++++++..
T Consensus 12 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 12 RDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred cChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 34557889999999999999999975 468899999986543 2345788899999998 69999999998853
Q ss_pred CCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 844 RKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 844 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
.+..+++|||+++|+|.+++..... ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.++|+|||
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg 166 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFG 166 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCc
Confidence 4567999999999999999876432 3478888999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHH
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRD 998 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~ 998 (1117)
++....... .......|++.|+|||.+. ...++.++|||||||++|||++|+.||....+. ..+..
T Consensus 167 ~~~~~~~~~----~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~-----~~~~~ 237 (282)
T cd06636 167 VSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM-----RALFL 237 (282)
T ss_pred chhhhhccc----cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH-----hhhhh
Confidence 987653221 1223456899999999875 356888999999999999999999999642211 11111
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.... ..... .....+..+.++++. ||+.+|++||++.++++
T Consensus 238 ~~~~--~~~~~----~~~~~~~~~~~li~~------cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 IPRN--PPPKL----KSKKWSKKFIDFIEG------CLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HhhC--CCCCC----cccccCHHHHHHHHH------HhCCChhhCcCHHHHhc
Confidence 1111 11110 112233445555554 99999999999999865
No 299
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.3e-32 Score=305.10 Aligned_cols=202 Identities=27% Similarity=0.317 Sum_probs=168.6
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++.+|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+++++.++|+||+++++++...+..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 456899999999999999999974 4688999999875432 22346788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+. +++.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9996 66766655432 3377888999999999999999999 9999999999999999999999999999764332
Q ss_pred CCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
.. ......+++.|+|||++.+ ..++.++||||||+++|||++|+.||+..
T Consensus 157 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 157 SQ----TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred CC----CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 11 1223457899999998865 45788999999999999999999999753
No 300
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.1e-32 Score=306.59 Aligned_cols=254 Identities=24% Similarity=0.382 Sum_probs=201.3
Q ss_pred HHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 772 GDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 772 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
++..++|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|+.++++++||||+++++++...+..++|
T Consensus 15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred cCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 34456899999999999999999974 46889999998765555566789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
+||+++++|.+++... .+++..+..++.|++.|+.|||++ +++||||||+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred EecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999998753 278899999999999999999999 999999999999999999999999999876543
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
... ......+++.|+|||.+....++.++||||||+++||+++|+.||...... ..+....... .+. .
T Consensus 168 ~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~-----~~~~~~~~~~-~~~--~ 235 (293)
T cd06647 168 EQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----RALYLIATNG-TPE--L 235 (293)
T ss_pred ccc----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh-----hheeehhcCC-CCC--C
Confidence 221 223346889999999998888999999999999999999999999653211 1111111111 000 0
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
......+..+.++++ .||+.+|++||++.+++..
T Consensus 236 --~~~~~~~~~l~~li~------~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 236 --QNPEKLSAIFRDFLN------RCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --CCccccCHHHHHHHH------HHccCChhhCcCHHHHhcC
Confidence 001112233444444 4999999999999999874
No 301
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.9e-32 Score=303.73 Aligned_cols=258 Identities=26% Similarity=0.355 Sum_probs=196.7
Q ss_pred hHHHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecC---
Q 001238 770 SIGDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANR--- 844 (1117)
Q Consensus 770 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~--- 844 (1117)
++++++++|.+.+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+.+++++ +|||++++++++...
T Consensus 16 ~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 16 SLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred cCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 4556788999999999999999999975 4688999999865422 345788899999999 899999999988653
Q ss_pred --CceEEEEEecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecc
Q 001238 845 --KTKLLFYDYMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLAD 921 (1117)
Q Consensus 845 --~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~D 921 (1117)
+..++||||+++++|.++++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~d 171 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVD 171 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEee
Confidence 35799999999999999886421 223589999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCccccCCccccccccCChhhhccC-----CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHH
Q 001238 922 FGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMT-----KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 922 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~ 996 (1117)
||+++....... ......|+..|+|||.+... .++.++|||||||++|||++|+.||..... ...+
T Consensus 172 fg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~-----~~~~ 242 (291)
T cd06639 172 FGVSAQLTSTRL----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP-----VKTL 242 (291)
T ss_pred cccchhcccccc----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH-----HHHH
Confidence 999986543211 12234688999999987543 368899999999999999999999964211 1111
Q ss_pred HHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 997 RDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
....+.. .....+ +......+.+ ++..|++.+|++||++.++++
T Consensus 243 ~~~~~~~--~~~~~~---~~~~~~~l~~------li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 243 FKIPRNP--PPTLLH---PEKWCRSFNH------FISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHhcCC--CCCCCc---ccccCHHHHH------HHHHHhhcChhhCcCHHHHhc
Confidence 1111111 111111 1112223333 445599999999999999976
No 302
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.6e-32 Score=304.04 Aligned_cols=199 Identities=27% Similarity=0.369 Sum_probs=171.8
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 478889999999999999985 468999999987653 23346789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+ +++|.+++.... ..+++.+++.++.|+++||+|||+. +++|+||||+||+++.++.++++|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999987543 3489999999999999999999999 999999999999999999999999999987654321
Q ss_pred CccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......++..|+|||++.. ..++.++||||+|+++|||++|++||..
T Consensus 155 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 203 (286)
T cd07832 155 ---RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG 203 (286)
T ss_pred ---CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCC
Confidence 12234568999999998764 4468999999999999999999888854
No 303
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.5e-32 Score=299.86 Aligned_cols=247 Identities=27% Similarity=0.399 Sum_probs=198.1
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
-|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 467788999999999999974 468899999886432 233457889999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++++|||++.......
T Consensus 85 ~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 85 GGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 999999998653 388999999999999999999998 99999999999999999999999999987664321
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
.......++..|+|||.+....++.++|||||||++|+|++|..||.... ............ .+.+
T Consensus 156 --~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~-------~~~~ 221 (277)
T cd06641 156 --IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH-----PMKVLFLIPKNN-------PPTL 221 (277)
T ss_pred --hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc-----hHHHHHHHhcCC-------CCCC
Confidence 12233468889999999988888999999999999999999999996421 111111111111 1122
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
....+..+.+++.. |++.+|++||++.++++.
T Consensus 222 ~~~~~~~~~~~i~~------~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 EGNYSKPLKEFVEA------CLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHH------HccCChhhCcCHHHHHhC
Confidence 33334445555544 999999999999999884
No 304
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.6e-32 Score=306.97 Aligned_cols=199 Identities=26% Similarity=0.416 Sum_probs=170.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
++|++.+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36788899999999999999865 589999998865322 234568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|++++++..+.... ..+++.++..++.|+++|++|||+. +|+||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 99999998876543 2389999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......++..|+|||+..+ ..++.++||||||+++|||++|++||..
T Consensus 155 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 155 ----EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred ----cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 12233567899999998865 4578899999999999999999999864
No 305
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.3e-32 Score=304.15 Aligned_cols=260 Identities=17% Similarity=0.255 Sum_probs=182.8
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcCC----CcEEEEEEeecCCccch-H----------HHHHHHHHHhccCCCCcceEEe
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLPS----GLTVAVKRFRASDKIST-G----------AFSSEIATLSRIRHRNIVRLLG 839 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~-~----------~~~~E~~~l~~l~H~niv~l~~ 839 (1117)
.++|.+.++||+|+||+||+|.+.+ +..+|+|+......... + ....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999998644 45667775433221111 0 1122334456678999999999
Q ss_pred eeecCC----ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC
Q 001238 840 WGANRK----TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY 915 (1117)
Q Consensus 840 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~ 915 (1117)
++.... ..++++|++. .++.+.+.... ..++..+..++.|+++||+|||++ +|+||||||+||+++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 765543 3467788764 35666655432 256788899999999999999999 999999999999999999
Q ss_pred cceeccccccccccCCCCCc---cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhH
Q 001238 916 ESCLADFGLARLVEDDSGGS---FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHV 992 (1117)
Q Consensus 916 ~~kl~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~ 992 (1117)
.++|+|||+|+......... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~ 242 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NL 242 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HH
Confidence 99999999998764322111 112233579999999999999999999999999999999999999997642222 21
Q ss_pred HHHHH-HHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 993 IQWVR-DHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 993 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
..... +........ .. ..+ ..+..+.++++. |+..+|++||++.++.+.+
T Consensus 243 ~~~~~~~~~~~~~~~-~~---~~~-~~~~~~~~~~~~------~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 243 IHAAKCDFIKRLHEG-KI---KIK-NANKFIYDFIEC------VTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhHHHHHHHhhhh-hh---ccC-CCCHHHHHHHHH------HHhCCCCCCCCHHHHHHhh
Confidence 11111 111111000 00 111 123455566665 9999999999999999876
No 306
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.1e-32 Score=304.27 Aligned_cols=199 Identities=26% Similarity=0.375 Sum_probs=168.4
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999754 68999999886542 22335788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+. ++|..++..... ..+++..+..++.|+++|++|||+. +++||||+|+||+++.++.+|++|||+++......
T Consensus 81 ~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~- 154 (284)
T cd07860 81 LH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 154 (284)
T ss_pred cc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-
Confidence 96 688888865432 3489999999999999999999999 99999999999999999999999999987654321
Q ss_pred CccccCCccccccccCChhhhccCC-CCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTK-ISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......++..|+|||+..+.. ++.++||||||+++|||++|+.||..
T Consensus 155 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~ 203 (284)
T cd07860 155 ---RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 203 (284)
T ss_pred ---cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1122335688999999876544 68899999999999999999999964
No 307
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.4e-32 Score=300.21 Aligned_cols=248 Identities=22% Similarity=0.346 Sum_probs=197.6
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
.|...+.||+|++|.||++.. .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 344557899999999999975 4688999999876554455678899999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.+++... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.++++|||.+.......
T Consensus 100 ~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--- 169 (285)
T cd06648 100 GGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--- 169 (285)
T ss_pred CCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC---
Confidence 99999998762 388999999999999999999999 99999999999999999999999999987654321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.......|++.|+|||...+..++.++||||||+++|||++|+.||... ............. ..... ..
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~-----~~~~~~~~~~~~~--~~~~~---~~ 238 (285)
T cd06648 170 -PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE-----PPLQAMKRIRDNL--PPKLK---NL 238 (285)
T ss_pred -cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC-----CHHHHHHHHHhcC--CCCCc---cc
Confidence 1222356899999999998888999999999999999999999998642 1122222222111 11100 01
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
...+..+.++++. |++.+|++||++.++++
T Consensus 239 ~~~~~~l~~li~~------~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 239 HKVSPRLRSFLDR------MLVRDPAQRATAAELLN 268 (285)
T ss_pred ccCCHHHHHHHHH------HcccChhhCcCHHHHcc
Confidence 1123345555555 99999999999999986
No 308
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=6.3e-32 Score=303.98 Aligned_cols=198 Identities=27% Similarity=0.362 Sum_probs=169.3
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCcc-----chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKI-----STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
+|++.+.||+|+||.||+|.. .+|+.||||+++..... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999985 46899999999765322 234567899999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+ +|+|.+++.... ..+++..+.+++.|+++||+|||++ +|+||||||+||+++.++.++|+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 999999997653 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
... ......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||..
T Consensus 155 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~ 205 (298)
T cd07841 155 PNR----KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPG 205 (298)
T ss_pred CCc----cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccC
Confidence 221 1223356788999998854 4678999999999999999999888764
No 309
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.9e-32 Score=300.92 Aligned_cols=255 Identities=25% Similarity=0.390 Sum_probs=197.0
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecCC-----
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRK----- 845 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~----- 845 (1117)
..+++|++.+.||+|+||.||+|..+ +++.||+|++..... ..+++.+|+++++++ +||||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 34678999999999999999999864 578999999876543 456799999999999 6999999999986644
Q ss_pred -ceEEEEEecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 846 -TKLLFYDYMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 846 -~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
..++||||+++++|.+++.... ....+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 4799999999999999886532 234589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhcc-----CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHH
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-----TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRD 998 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~ 998 (1117)
.+....... .......|+..|+|||++.. ..++.++||||||+++|||++|+.||..... ......
T Consensus 159 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~ 229 (275)
T cd06608 159 VSAQLDSTL----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-----MRALFK 229 (275)
T ss_pred cceecccch----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-----HHHHHH
Confidence 997654321 12234568999999998753 3567899999999999999999999964211 111111
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..... ...... .......+.++++ +|+..||++||++.++++
T Consensus 230 ~~~~~--~~~~~~---~~~~~~~~~~li~------~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 230 IPRNP--PPTLKS---PENWSKKFNDFIS------ECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hhccC--CCCCCc---hhhcCHHHHHHHH------HHhhcChhhCcCHHHHhc
Confidence 11111 111110 1112334445444 499999999999999976
No 310
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.6e-32 Score=300.36 Aligned_cols=246 Identities=25% Similarity=0.407 Sum_probs=195.9
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC-CccchHHHHHHHHHHhccC---CCCcceEEeeeecCCceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS-DKISTGAFSSEIATLSRIR---HRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.|++.+.||+|+||.||+|.+ .+++.||+|.++.. .....+++.+|++++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999985 57899999998754 3334567889999999996 999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++++|.+++... .+++..+..++.|+++|+.|||+. +|+||||+|+||++++++.++++|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999999998653 488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
. .......|+..|+|||.+.. ..++.++||||||+++|+|++|+.||.... ........ ... .
T Consensus 155 ~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-----~~~~~~~~-~~~-~----- 218 (277)
T cd06917 155 S----SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD-----AFRAMMLI-PKS-K----- 218 (277)
T ss_pred c----cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC-----hhhhhhcc-ccC-C-----
Confidence 2 12234468899999998865 456899999999999999999999996421 11111111 111 0
Q ss_pred CcccCCC-CchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGH-PDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~-~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+.+... .+..+.+++. .|++.+|++||++.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~i~------~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 219 PPRLEDNGYSKLLREFVA------ACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCCCcccCCHHHHHHHH------HHcCCCcccCcCHHHHhh
Confidence 1112221 3334455444 499999999999999977
No 311
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-32 Score=307.27 Aligned_cols=200 Identities=27% Similarity=0.378 Sum_probs=177.8
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
....|.+...||+|.|++|..|++ .++..||||.+.+.. ......+.+|+++|+.+.|||||+++.+.......|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 345788899999999999999974 469999999997653 33334588999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+.+|.+.+++.... ...+..+..++.|+.+|++|+|++ .|||||||++||+++.+..+||+|||++.++..
T Consensus 134 ~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999998763 366688899999999999999999 999999999999999999999999999998864
Q ss_pred CCCCccccCCccccccccCChhhhccCCC-CcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKI-SEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
. ....+++|++.|.|||++.+.+| ++.+|+||+|+++|.|+.|..||++
T Consensus 208 ~-----~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG 257 (596)
T KOG0586|consen 208 G-----LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG 257 (596)
T ss_pred c-----ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC
Confidence 3 24457799999999999998777 4899999999999999999999975
No 312
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.5e-32 Score=302.06 Aligned_cols=251 Identities=25% Similarity=0.384 Sum_probs=190.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC-ccchHHHHHHHHH-HhccCCCCcceEEeeeecCCceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD-KISTGAFSSEIAT-LSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
++|++.+.||+|+||.||+|... +|+.||+|+++... .....++..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888899999999999999754 69999999987542 2223455566665 566789999999999999999999999
Q ss_pred ecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 853 YMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|++ |+|.+++... .....+++..+..++.|++.||+|||+++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 996 6787777542 22345899999999999999999999853 7999999999999999999999999999865432
Q ss_pred CCCccccCCccccccccCChhhhcc----CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANM----TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
. ......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||..... ..+.+....... .
T Consensus 158 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~--~- 225 (283)
T cd06617 158 V-----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT----PFQQLKQVVEEP--S- 225 (283)
T ss_pred c-----ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc----CHHHHHHHHhcC--C-
Confidence 1 2233468899999998754 4568899999999999999999999963211 112222222111 1
Q ss_pred cccCcccC-CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1008 EVLDPKLQ-GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1008 ~~~~~~l~-~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+.++ ...+..+.+++.. |+..+|++||++.++++
T Consensus 226 ----~~~~~~~~~~~l~~li~~------~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 ----PQLPAEKFSPEFQDFVNK------CLKKNYKERPNYPELLQ 260 (283)
T ss_pred ----CCCCccccCHHHHHHHHH------HccCChhhCcCHHHHhc
Confidence 1111 1223345555554 99999999999999977
No 313
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.1e-32 Score=298.66 Aligned_cols=247 Identities=23% Similarity=0.269 Sum_probs=198.0
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
+|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999865 589999999975432 335678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++++|.+++... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999998764 3488999999999999999999999 99999999999999999999999999998764321
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
......|+..|+|||.+....++.++|+||+|+++|+|++|+.||...... ....+....... . +
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~---~----~ 219 (258)
T cd05578 155 -----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQETA---D----V 219 (258)
T ss_pred -----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhccc---c----c
Confidence 223456888999999998888999999999999999999999999753221 122222222211 1 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCH--HHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTM--KDVA 1050 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~--~~v~ 1050 (1117)
..+...+....+++.. |++.+|++||++ +|+.
T Consensus 220 ~~~~~~~~~~~~~i~~------~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 220 LYPATWSTEAIDAINK------LLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cCcccCcHHHHHHHHH------HccCChhHcCCccHHHHh
Confidence 1122233445555554 999999999999 5543
No 314
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.98 E-value=7.4e-32 Score=297.65 Aligned_cols=251 Identities=25% Similarity=0.394 Sum_probs=197.4
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeec--CCceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGAN--RKTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ 851 (1117)
+|++.+.||.|+||.||+|.. .+++.||+|++.... ....+++..|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999974 468899999987542 2334568889999999999999999997754 34578999
Q ss_pred EecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHh-----ccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 852 DYMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLH-----HDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
||+++++|.+++... .....+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+|++|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999998653 22345899999999999999999999 66 9999999999999999999999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKD 1005 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1117)
........ ......+++.|+|||.+....++.++||||||+++|+|++|+.||.... . ...... .....
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~---~~~~~~-~~~~~- 226 (265)
T cd08217 158 KILGHDSS----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--Q---LQLASK-IKEGK- 226 (265)
T ss_pred ccccCCcc----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--H---HHHHHH-HhcCC-
Confidence 87654321 1223468999999999998889999999999999999999999997531 1 122221 11111
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.+.++...+..+..++.. |++.+|++||++.+|++.
T Consensus 227 -----~~~~~~~~~~~~~~l~~~------~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 -----FRRIPYRYSSELNEVIKS------MLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----CCCCccccCHHHHHHHHH------HccCCcccCCCHHHHhhC
Confidence 112233334455555554 999999999999999863
No 315
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.98 E-value=9.2e-32 Score=300.70 Aligned_cols=254 Identities=25% Similarity=0.382 Sum_probs=203.2
Q ss_pred HHhccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 772 GDATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 772 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
.+.++.|+..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++|+||+++++++...+..++|
T Consensus 15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 345677888899999999999999865 688999999986544 456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
+||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+|+||+|+||+++.++.++|+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 94 MEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 99999999999998753 2489999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....+ ........... .....
T Consensus 169 ~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-----~~~~~~~~~~~--~~~~~ 237 (286)
T cd06614 169 EKS----KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-----LRALFLITTKG--IPPLK 237 (286)
T ss_pred chh----hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcC--CCCCc
Confidence 211 22234578899999999888899999999999999999999999864211 11111111111 11100
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
. ....+..+.++++. |++.+|.+||++.++++
T Consensus 238 ~---~~~~~~~l~~li~~------~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 238 N---PEKWSPEFKDFLNK------CLVKDPEKRPSAEELLQ 269 (286)
T ss_pred c---hhhCCHHHHHHHHH------HhccChhhCcCHHHHhh
Confidence 0 11123345555554 99999999999999976
No 316
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.98 E-value=7.6e-32 Score=306.12 Aligned_cols=204 Identities=25% Similarity=0.345 Sum_probs=168.9
Q ss_pred CCCCCCeeeecCCeEEEEEEcC---CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecC--CceE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP---SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTKL 848 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 848 (1117)
+|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778889999999999999864 47899999998632 33345678899999999999999999999888 7899
Q ss_pred EEEEecCCCChhhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC----CCcceeccc
Q 001238 849 LFYDYMPNGTLGMLLHDGE--CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE----RYESCLADF 922 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~----~~~~kl~Df 922 (1117)
+||||+++ ++.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 5666554322 123588999999999999999999999 9999999999999999 999999999
Q ss_pred cccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 923 GLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 923 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
|+++........ ........++..|+|||++.+ ..++.++||||||+++|||++|++||...
T Consensus 157 g~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 157 GLARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred ccccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 999876443211 122334578899999998765 45789999999999999999999999754
No 317
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.98 E-value=7.6e-32 Score=296.27 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=198.0
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999754 58899999986542 23445788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc-ceeccccccccccCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE-SCLADFGLARLVEDDS 932 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~-~kl~DfGla~~~~~~~ 932 (1117)
+++++|.+++..... ..+++..+..++.|+++|++|||+. +++|+||||+||++++++. +|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999999876432 2478999999999999999999999 9999999999999998864 6999999998764322
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
. ......|++.|+|||+.....++.++||||||+++|||++|+.||... ...+++........ +
T Consensus 157 ~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~-------~ 220 (257)
T cd08225 157 E----LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-----NLHQLVLKICQGYF-------A 220 (257)
T ss_pred c----cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHhcccC-------C
Confidence 1 112346889999999998888999999999999999999999998642 22233333222111 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
......+..+.+++.. |+..+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~~i~~------~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 221 PISPNFSRDLRSLISQ------LFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCCCCHHHHHHHHH------HhccChhhCcCHHHHhh
Confidence 1122233345555554 99999999999999976
No 318
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.98 E-value=7.7e-32 Score=301.02 Aligned_cols=201 Identities=27% Similarity=0.398 Sum_probs=170.9
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc-cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
+|++.+.||+|++|.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778899999999999999864 688999999876532 23456788999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++ +|.+++........+++..+.+++.|+++||+|||+. +++||||||+||++++++.++++|||+++......
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 85 8888876654334589999999999999999999999 99999999999999999999999999997654321
Q ss_pred ccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 935 SFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
.......++..|++||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 155 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 204 (284)
T cd07836 155 --NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGT 204 (284)
T ss_pred --cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 12223457889999998765 45788999999999999999999999753
No 319
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.98 E-value=5.3e-32 Score=302.97 Aligned_cols=199 Identities=27% Similarity=0.411 Sum_probs=172.1
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||+|..+ +++.||+|+++.. .....+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6888899999999999999865 5889999998753 233356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
++++.+..+.... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 82 VERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9987777665443 2388999999999999999999999 999999999999999999999999999987654321
Q ss_pred CccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......++..|+|||++... .++.++||||||+++|||++|+.||..
T Consensus 156 ---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 156 ---SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred ---ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 122345678999999999877 889999999999999999999999964
No 320
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=7.7e-32 Score=308.15 Aligned_cols=202 Identities=23% Similarity=0.321 Sum_probs=169.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeec----CCceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGAN----RKTKL 848 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~ 848 (1117)
++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 6789999999999999999975 468999999987542 2334567889999999999999999987753 34679
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+||||+. |+|.+++... +.+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 85 lv~e~~~-~~l~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 85 VVMDLME-SDLHHIIHSD---QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEehhh-hhHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 9999995 6888888654 3389999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
...............++..|+|||.+.. ..++.++||||||+++|||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~ 214 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPG 214 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCC
Confidence 5432222122234578999999998765 5688999999999999999999999965
No 321
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.98 E-value=1.5e-31 Score=297.36 Aligned_cols=242 Identities=23% Similarity=0.271 Sum_probs=184.8
Q ss_pred eeeecCCeEEEEEEc-CCCcEEEEEEeecCCc---cchHHHHHHHHHHhc---cCCCCcceEEeeeecCCceEEEEEecC
Q 001238 783 IIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK---ISTGAFSSEIATLSR---IRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
.||+|+||.||++.. .+++.||+|.+..... .....+.+|..+++. .+||+|+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999975 4689999998865421 112234455444433 479999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++|||++......
T Consensus 81 ~~~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---- 150 (279)
T cd05633 81 GGDLHYHLSQH---GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---- 150 (279)
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecccc----
Confidence 99999988754 3489999999999999999999999 9999999999999999999999999999765322
Q ss_pred cccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
......||..|+|||.+. +..++.++||||+||++|||++|+.||......... .+...... ....+
T Consensus 151 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~~-------~~~~~ 218 (279)
T cd05633 151 --KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTLT-------VNVEL 218 (279)
T ss_pred --CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH---HHHHHhhc-------CCcCC
Confidence 112346899999999886 456889999999999999999999999753222211 11111110 11223
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAAL 1052 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~~ 1052 (1117)
+...+..+..+++. |++.+|++|| +++++++.
T Consensus 219 ~~~~~~~~~~li~~------~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 219 PDSFSPELKSLLEG------LLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccccCHHHHHHHHH------HhcCCHHHhcCCCCCCHHHHHhC
Confidence 33344455565555 9999999999 58888763
No 322
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.98 E-value=6.9e-32 Score=308.80 Aligned_cols=201 Identities=25% Similarity=0.397 Sum_probs=167.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC-ccchHHHHHHHHHHhccCCCCcceEEeeeecC-----Cce
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD-KISTGAFSSEIATLSRIRHRNIVRLLGWGANR-----KTK 847 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 847 (1117)
+++|++.++||+|+||.||+|.. .+|+.||+|++.... .....++.+|++++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46799999999999999999974 568999999986432 22345678899999999999999999876544 357
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||++ +++.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence 99999996 4777777543 389999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
...... .........||..|+|||.+.. ..++.++||||+||++|||++|+.||.+
T Consensus 156 ~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 156 ADPEHD-HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred cccccc-ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 643221 1112234578999999998654 5688999999999999999999999964
No 323
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=2e-31 Score=301.81 Aligned_cols=209 Identities=25% Similarity=0.297 Sum_probs=169.9
Q ss_pred hHHHhccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCc
Q 001238 770 SIGDATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 770 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 846 (1117)
.+....++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++...+.
T Consensus 6 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 85 (310)
T cd07865 6 PFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT 85 (310)
T ss_pred cccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccc
Confidence 34455567999999999999999999754 689999999865422 223356789999999999999999998866543
Q ss_pred --------eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcce
Q 001238 847 --------KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESC 918 (1117)
Q Consensus 847 --------~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~k 918 (1117)
.++||||+. +++.+.+.... ..+++.++..++.|+++||+|||++ +++||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~k 159 (310)
T cd07865 86 PYNRYKGSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILK 159 (310)
T ss_pred cccCCCceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEE
Confidence 499999996 47777776532 3489999999999999999999999 999999999999999999999
Q ss_pred eccccccccccCCCCCccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 919 LADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 919 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
|+|||++..................++..|+|||.+.+. .++.++||||||+++|||++|+.||..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~ 226 (310)
T cd07865 160 LADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQG 226 (310)
T ss_pred ECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999987654322211222345678899999987654 478899999999999999999999965
No 324
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.98 E-value=3.1e-31 Score=290.17 Aligned_cols=249 Identities=27% Similarity=0.409 Sum_probs=200.8
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
.|+..+.||+|++|.||++... +++.||+|++........+.+.+|++++++++||+++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3677899999999999999864 688999999986654456789999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.+++.... +.+++..+..++.|+++|++|||+. +++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 999999987653 3489999999999999999999998 999999999999999999999999999987654321
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
.....++..|+|||.+....++.++||||||+++|+|++|+.||.... ........... ....... .
T Consensus 154 ---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~--~~~~~~~---~ 220 (253)
T cd05122 154 ---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP-----PMKALFKIATN--GPPGLRN---P 220 (253)
T ss_pred ---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHHhc--CCCCcCc---c
Confidence 334578899999999988889999999999999999999999996421 11111111111 1111111 1
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
...+..+.+++.. |++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~i~~------~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 221 EKWSDEFKDFLKK------CLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cccCHHHHHHHHH------HccCChhhCCCHHHHhc
Confidence 1113345555554 99999999999999875
No 325
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=1.6e-31 Score=299.94 Aligned_cols=199 Identities=26% Similarity=0.325 Sum_probs=168.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCcc--chHHHHHHHHHHhccCCCCcceEEeeeecC--CceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKI--STGAFSSEIATLSRIRHRNIVRLLGWGANR--KTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 850 (1117)
++|++.+.||+|+||.||+|... +++.||+|.++..... ....+.+|++++++++||||+++++++... +..|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999865 5889999999754322 233567899999999999999999998877 889999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||++ ++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.++|+|||+++....
T Consensus 85 ~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 48988887643 2489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.. .......+++.|+|||.+.+. .++.++||||+|+++|||++|+.||..
T Consensus 159 ~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~ 209 (293)
T cd07843 159 PL----KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPG 209 (293)
T ss_pred Cc----cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 31 122334578899999988654 468999999999999999999999965
No 326
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.98 E-value=1e-31 Score=300.76 Aligned_cols=254 Identities=27% Similarity=0.380 Sum_probs=190.5
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC-ccchHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD-KISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|...+.||+|+||.||++.. .+++.||+|++.... ......+.+|+.++.++. ||||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 455667899999999999875 468999999987543 234557889999999996 99999999999999999999999
Q ss_pred cCCCChhhhh---cCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 854 MPNGTLGMLL---HDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 854 ~~~gsL~~~l---~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
++. ++.++. ... ....+++..+.+++.|++.||+|||+.. +|+||||||+||+++.++.++|+|||+++....
T Consensus 85 ~~~-~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MDI-SLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred ccC-CHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 864 554433 221 1244899999999999999999999742 899999999999999999999999999976543
Q ss_pred CCCCccccCCccccccccCChhhhccC---CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMT---KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
.. ......|+..|+|||++... .++.++|||||||++|||++|+.||.... ...+.+........ +
T Consensus 161 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~-~- 229 (288)
T cd06616 161 SI-----AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGDP-P- 229 (288)
T ss_pred CC-----ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCCC-C-
Confidence 21 12234688999999998765 68999999999999999999999996421 22222222222111 1
Q ss_pred cccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1008 EVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1008 ~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.+.+......+..+.++++ .|++.+|++||++.+|++.
T Consensus 230 -~~~~~~~~~~~~~l~~li~------~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 -ILSNSEEREFSPSFVNFIN------LCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -cCCCcCCCccCHHHHHHHH------HHccCChhhCcCHHHHhcC
Confidence 1111111223334445444 4999999999999999773
No 327
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=7.6e-33 Score=327.91 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=189.0
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeeec---------
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGAN--------- 843 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 843 (1117)
..+|+..+.||+||||.||+++.+ ||+.||||++... .......+.+|+..+++++|||||+++..+.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 346778899999999999999854 8999999999754 33344568899999999999999999832100
Q ss_pred ----------------------------------------------C---------------------------------
Q 001238 844 ----------------------------------------------R--------------------------------- 844 (1117)
Q Consensus 844 ----------------------------------------------~--------------------------------- 844 (1117)
.
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0
Q ss_pred -------------------------------CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 001238 845 -------------------------------KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHH 893 (1117)
Q Consensus 845 -------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~ 893 (1117)
...|+-||||+..++.++++++.... .....++++++|++||+|+|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHh
Confidence 11367799999999999988764321 467889999999999999999
Q ss_pred cCCCceeeeccccCeEEEcCCCcceecccccccccc--------------CCCCCccccCCccccccccCChhhhccC--
Q 001238 894 DCVPAILHRDVKSHNILLGERYESCLADFGLARLVE--------------DDSGGSFSANPQFAGSYGYIAPEYANMT-- 957 (1117)
Q Consensus 894 ~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~--------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~-- 957 (1117)
+ |||||||||.||++|++..+||+|||+|.... ...+......+..+||.-|+|||++.+.
T Consensus 716 ~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 Q---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred C---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 9 99999999999999999999999999998722 0111222345678999999999998765
Q ss_pred -CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhcc
Q 001238 958 -KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCT 1036 (1117)
Q Consensus 958 -~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~ 1036 (1117)
.|+.|+|+||+|||++||+. ||.. ..+....+.. ++... ++...+-...++....+++.+++
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~y---PF~T----sMERa~iL~~-LR~g~---------iP~~~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLY---PFGT----SMERASILTN-LRKGS---------IPEPADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhc---cCCc----hHHHHHHHHh-cccCC---------CCCCcccccccchHHHHHHHHHh
Confidence 49999999999999999986 4642 1122222222 22211 11111111223334445666799
Q ss_pred CCCCCCCCCHHHHHH
Q 001238 1037 SNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1037 ~~~p~~RPs~~~v~~ 1051 (1117)
+.||.+|||+.|++.
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999865
No 328
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=1.5e-31 Score=299.31 Aligned_cols=244 Identities=22% Similarity=0.365 Sum_probs=194.0
Q ss_pred CCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 781 GNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 781 ~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
..+||+|+||.||++.. .+++.||||++..........+.+|+.+++.++|+||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 36799999999999975 47899999998655444556789999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccC
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSAN 939 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 939 (1117)
.+++... .+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||++....... ...
T Consensus 105 ~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~----~~~ 173 (292)
T cd06657 105 TDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----PRR 173 (292)
T ss_pred HHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc----ccc
Confidence 9987643 378999999999999999999999 99999999999999999999999999987654321 122
Q ss_pred CccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 940 PQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
....|++.|+|||.+....++.++||||+|+++|||++|+.||... ........+... ..... +.. ...+
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~--~~~~~~~~~~~~---~~~~~----~~~-~~~~ 243 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDN---LPPKL----KNL-HKVS 243 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhh---CCccc----CCc-ccCC
Confidence 3356889999999998888999999999999999999999998642 111122222111 11000 011 1123
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+..++.. |++.+|.+||++.++++
T Consensus 244 ~~l~~li~~------~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 244 PSLKGFLDR------LLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHH------HHhCCcccCcCHHHHhc
Confidence 345555554 99999999999999887
No 329
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=2.3e-31 Score=300.64 Aligned_cols=248 Identities=26% Similarity=0.350 Sum_probs=192.0
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCcc---chHHHHHHHHHHhccCCCCcceEEeeeecCCceEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKI---STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 849 (1117)
..+.|...+.||+|+||+||+|... +++.||+|++...... ..+++.+|+++++.++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 4456888999999999999999754 6899999998644322 23468899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
||||++ |++.+++.... ..+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++|+|||++....
T Consensus 93 v~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 93 VMEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred EHHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 999997 56666665432 3489999999999999999999998 99999999999999999999999999987653
Q ss_pred CCCCCccccCCccccccccCChhhhc---cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCC
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYAN---MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDP 1006 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1117)
.. ....+++.|+|||++. ...++.++||||||+++|||++|+.||.... ............ .
T Consensus 167 ~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~-----~~~~~~~~~~~~--~ 231 (307)
T cd06607 167 PA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQND--S 231 (307)
T ss_pred CC--------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc-----HHHHHHHHhcCC--C
Confidence 21 2346788999999874 4568899999999999999999999986421 111111111111 1
Q ss_pred ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1007 VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1007 ~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
... . ...++..+..+++ .||+.+|++||++.+++..
T Consensus 232 ~~~-~---~~~~~~~~~~li~------~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 232 PTL-S---SNDWSDYFRNFVD------SCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCC-C---chhhCHHHHHHHH------HHhcCChhhCcCHHHHhcC
Confidence 110 0 1112333444444 5999999999999999874
No 330
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=4e-31 Score=291.80 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=195.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC-----CccchHHHHHHHHHHhccCCCCcceEEeeeecC--Cce
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS-----DKISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 847 (1117)
.+|++.+.||+|+||.||+|.. .+++.||+|++... .......+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 3688899999999999999975 46899999987532 122345788999999999999999999988664 457
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++++|.+++... +.+++..+.+++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 8999999999999998754 2378899999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
........ .......++..|+|||++.+..++.++|||||||++|||++|+.||... .....+.+.....
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~---- 225 (264)
T cd06653 156 IQTICMSG-TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY-----EAMAAIFKIATQP---- 225 (264)
T ss_pred cccccccC-ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc-----CHHHHHHHHHcCC----
Confidence 54211111 1123456899999999998888999999999999999999999999642 1112222222111
Q ss_pred cccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1008 EVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1008 ~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..+.++......++++++. |+. +|..||++.+++.
T Consensus 226 --~~~~~p~~~~~~~~~~i~~------~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 --TKPMLPDGVSDACRDFLKQ------IFV-EEKRRPTAEFLLR 260 (264)
T ss_pred --CCCCCCcccCHHHHHHHHH------Hhc-CcccCccHHHHhc
Confidence 1123344444556666665 888 5799999997764
No 331
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=2.7e-31 Score=298.42 Aligned_cols=201 Identities=24% Similarity=0.286 Sum_probs=166.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc--cchHHHHHHHHHHhccC-CCCcceEEeeeecCCc-----
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK--ISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKT----- 846 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~----- 846 (1117)
++|++.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|++++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3688889999999999999985 4689999998865422 22356888999999995 6999999998877665
Q ss_pred eEEEEEecCCCChhhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-CCcceecccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGEC--AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-RYESCLADFG 923 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfG 923 (1117)
.|+||||+++ ++.+++..... ...+++..++.++.||++||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 78887764321 23589999999999999999999999 9999999999999998 8899999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||..
T Consensus 157 ~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 214 (295)
T cd07837 157 LGRAFSIPV----KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPG 214 (295)
T ss_pred cceecCCCc----cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCC
Confidence 998654321 11223356889999998754 5678999999999999999999999964
No 332
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=2.2e-32 Score=278.64 Aligned_cols=273 Identities=22% Similarity=0.273 Sum_probs=206.8
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC---C--CcEEEEEEeecCCccc--hHHHHHHHHHHhccCCCCcceEEeeeec-CCc
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP---S--GLTVAVKRFRASDKIS--TGAFSSEIATLSRIRHRNIVRLLGWGAN-RKT 846 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~---~--~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 846 (1117)
...|+....||+|.||.||+|..+ + ...+|||+++...+.+ .....+|+..++.++||||+.+..++.+ +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 346888899999999999999532 2 2379999998653321 2356789999999999999999998877 778
Q ss_pred eEEEEEecCCCChhhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC----Ccceec
Q 001238 847 KLLFYDYMPNGTLGMLLHDGE--CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER----YESCLA 920 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~----~~~kl~ 920 (1117)
.++++||.+. +|..+++.++ ....++...+..|+.||+.|+.|||++ =|+|||+||.||||..+ |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence 8999999975 7777775432 234688999999999999999999999 79999999999999877 899999
Q ss_pred cccccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCC----ChhHHHH
Q 001238 921 DFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDASFPD----GQHVIQW 995 (1117)
Q Consensus 921 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~----~~~~~~~ 995 (1117)
|||++|.+...- .........+.|.+|.|||.+.+ ..|+++.||||.|||+.||++-++-|.+.... ...-...
T Consensus 179 DlGlaR~~~~pl-kpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 179 DLGLARLFNNPL-KPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred cccHHHHhhccc-cccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 999999886532 22334556789999999997765 67999999999999999999999988653221 1233445
Q ss_pred HHHHHhcCCCCccccCcccCCCCch--hHHHHH---------------------HHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 996 VRDHLKSKKDPVEVLDPKLQGHPDT--QIQEML---------------------QALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~l---------------------~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
+.+++..-+.+.+..+|.+..-++. .+..+. ..+.+...++..||.+|-|+.+.++.
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 5555555555555555555443321 111111 13345556889999999999988764
No 333
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=2.8e-31 Score=300.31 Aligned_cols=200 Identities=30% Similarity=0.373 Sum_probs=167.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCcc--chHHHHHHHHHHhccCCCCcceEEeeeecC--CceEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKI--STGAFSSEIATLSRIRHRNIVRLLGWGANR--KTKLL 849 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 849 (1117)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++..... ....+.+|++++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 45789999999999999999985 46899999998754321 223467899999999999999999988655 46799
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
||||++ ++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 86 v~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999996 47888776542 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
... .......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||..
T Consensus 160 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~ 211 (309)
T cd07845 160 LPA----KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPG 211 (309)
T ss_pred Ccc----CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 322 11223346788999998865 5678999999999999999999999964
No 334
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=3.3e-31 Score=292.72 Aligned_cols=247 Identities=20% Similarity=0.282 Sum_probs=189.8
Q ss_pred HHHhccCCCCCCee--eecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCc
Q 001238 771 IGDATRSLTAGNII--GQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 771 ~~~~~~~~~~~~~l--g~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 846 (1117)
.....+.|++.+.+ |+|+||.||++.. .+++.+|+|++....... .|+.....+ +||||+++++++...+.
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~ 83 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKG 83 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCe
Confidence 34445677777776 9999999999874 468899999987542211 122222222 69999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC-cceecccccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY-ESCLADFGLA 925 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfGla 925 (1117)
.++||||+++++|.+++.... .+++.++..++.|+++|++|||+. +++||||||+||+++.++ .++++|||++
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 999999999999999997653 489999999999999999999999 999999999999999998 9999999998
Q ss_pred ccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKD 1005 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1117)
+..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||............+.... ...
T Consensus 158 ~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~-- 226 (267)
T PHA03390 158 KIIGTP--------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK-- 226 (267)
T ss_pred eecCCC--------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc--
Confidence 765422 123588999999999988999999999999999999999999975433222222222211 111
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCC-HHHHHH
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPT-MKDVAA 1051 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs-~~~v~~ 1051 (1117)
.......+....+++.. |++.+|.+||+ ++++++
T Consensus 227 ------~~~~~~~~~~~~~li~~------~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 227 ------LPFIKNVSKNANDFVQS------MLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ------CCcccccCHHHHHHHHH------HhccChhhCCchHHHHhc
Confidence 01112344455666655 99999999995 588764
No 335
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-33 Score=281.85 Aligned_cols=252 Identities=27% Similarity=0.319 Sum_probs=194.1
Q ss_pred CCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCc-cchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCC
Q 001238 780 AGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDK-ISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 780 ~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
-...||.|+||+|+|.. .+.|+..|||+++.... .+++++..|.++..+- ..||||+++|++..++..|+.||.|+
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 34569999999999975 56799999999987643 5667888899875554 78999999999999999999999994
Q ss_pred CChhhhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 857 GTLGMLLHDG--ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 857 gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
.+++.+-+.- .....+++.-.-.|....+.||+||-+.. .|||||+||+|||++..|.+||||||++..+.+.
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S--- 221 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS--- 221 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH---
Confidence 5666544321 11234888888889999999999998775 8999999999999999999999999999877542
Q ss_pred ccccCCccccccccCChhhhc--cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 935 SFSANPQFAGSYGYIAPEYAN--MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
.+.+.-+|-..|||||.+. +..|+-++||||+|+++||++||+.||+. ...+.+.+.....+.+ +....+
T Consensus 222 --iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~----w~svfeql~~Vv~gdp--p~l~~~ 293 (361)
T KOG1006|consen 222 --IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK----WDSVFEQLCQVVIGDP--PILLFD 293 (361)
T ss_pred --HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch----HHHHHHHHHHHHcCCC--CeecCc
Confidence 3445557889999999885 34589999999999999999999999964 4556777777665542 211111
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.-.-.+...... .+..|+-.|-.+||.+.++.+
T Consensus 294 ~~~~~~s~~~~~------fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 294 KECVHYSFSMVR------FINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ccccccCHHHHH------HHHHHhhcccccCcchhhhhc
Confidence 111122222333 344599999999999999866
No 336
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=1.8e-31 Score=297.84 Aligned_cols=198 Identities=26% Similarity=0.357 Sum_probs=167.8
Q ss_pred CCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 778 LTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
|++.+.||+|++|.||+|.. .+|+.||+|++.... ....+.+.+|++++++++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56788999999999999975 479999999987543 222356888999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
+ ++|.+++..... ..+++..+..++.|+++||+|||++ +++||||+|+||+++.++.++|+|||+++......
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-- 153 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-- 153 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--
Confidence 5 689988876432 3489999999999999999999998 99999999999999999999999999997654221
Q ss_pred ccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 935 SFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||..
T Consensus 154 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 202 (283)
T cd07835 154 --RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPG 202 (283)
T ss_pred --cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 112233568899999987654 578899999999999999999999964
No 337
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=2.4e-31 Score=306.42 Aligned_cols=197 Identities=24% Similarity=0.332 Sum_probs=167.9
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecC------
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANR------ 844 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 844 (1117)
..++|++.+.||+|+||.||+|.. .+|+.||+|++... .....+++.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 456899999999999999999975 47899999998643 223345677899999999999999999987643
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
...|+||||++ ++|.+.+... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 35699999996 5787777542 78889999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||..
T Consensus 165 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 165 ARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred ceeCCCCC-----CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 98754321 12334688999999999999999999999999999999999999964
No 338
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=4.9e-31 Score=289.20 Aligned_cols=247 Identities=28% Similarity=0.434 Sum_probs=200.1
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|++|.||++... +++.||+|.+..... ...+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999754 678999999976543 3456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+++++|.+++... +.+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999998764 3489999999999999999999999 999999999999999999999999999987754322
Q ss_pred CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcc
Q 001238 934 GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPK 1013 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1117)
......++..|+|||......++.++||||+|+++|+|++|+.||.... .. .......... .+.
T Consensus 155 ----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~-~~~~~~~~~~-------~~~ 218 (254)
T cd06627 155 ----DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----PM-AALFRIVQDD-------HPP 218 (254)
T ss_pred ----cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HH-HHHHHHhccC-------CCC
Confidence 1234568899999999988888999999999999999999999986421 11 1111111111 112
Q ss_pred cCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1014 LQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1014 l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
++...+..+.+++.. |+..+|++||++.+++.
T Consensus 219 ~~~~~~~~~~~~i~~------~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 219 LPEGISPELKDFLMQ------CFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCHHHHHHHHH------HHhCChhhCcCHHHHhc
Confidence 223334455555554 99999999999999874
No 339
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=5.7e-31 Score=289.41 Aligned_cols=251 Identities=29% Similarity=0.439 Sum_probs=201.9
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecC--CceEEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTKLLFY 851 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 851 (1117)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++.+... +..++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999865 689999999876542 3456789999999999999999999999888 8899999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++++|.+++.... .+++.++..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999987653 489999999999999999999998 9999999999999999999999999999877543
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
... .......++..|+|||......++.++||||||+++|+|++|+.||.... .....+....... . .
T Consensus 155 ~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~-~-----~ 222 (260)
T cd06606 155 ETG--EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKIGSSG-E-----P 222 (260)
T ss_pred ccc--ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhccccC-C-----C
Confidence 211 11234568899999999988889999999999999999999999997532 1111111111100 1 1
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+.++...+..+.+++.. |++.+|++||++.++++
T Consensus 223 ~~~~~~~~~~l~~~i~~------~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 223 PEIPEHLSEEAKDFLRK------CLRRDPKKRPTADELLQ 256 (260)
T ss_pred cCCCcccCHHHHHHHHH------hCcCChhhCCCHHHHhh
Confidence 22233334455555554 99999999999999975
No 340
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=3.4e-31 Score=292.03 Aligned_cols=242 Identities=25% Similarity=0.336 Sum_probs=193.0
Q ss_pred eeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 784 IGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999864 48899999987542 22346789999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccC
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSAN 939 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 939 (1117)
.+++.... .+++..+..++.|++.||+|+|+. +++|+||||+||+++.++.++|+|||+++...... ..
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-----~~ 149 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-----KT 149 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----cc
Confidence 99997642 388999999999999999999998 99999999999999999999999999998765421 12
Q ss_pred CccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 940 PQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
....++..|+|||.+....++.++|+||+|+++|||++|+.||..... ............... ...+...+
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~ 220 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE---DPMEIYNDILKGNGK------LEFPNYID 220 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC---CHHHHHHHHhccCCC------CCCCcccC
Confidence 234688999999999888899999999999999999999999965322 122333332221111 11222223
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCCC-----HHHHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRPT-----MKDVAA 1051 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RPs-----~~~v~~ 1051 (1117)
..+.+++.. |++.+|++||+ ++|+++
T Consensus 221 ~~~~~~i~~------~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 221 KAAKDLIKQ------LLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHH------HccCChhhCcCCcccCHHHHhc
Confidence 455555555 99999999999 566554
No 341
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=3.7e-31 Score=294.27 Aligned_cols=244 Identities=21% Similarity=0.258 Sum_probs=190.6
Q ss_pred eeecCCeEEEEEEc-CCCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 784 IGQGRSGIVYKVTL-PSGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
||+|+||+||++.. .+|+.||+|++.... ......+..|++++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999874 468999999986532 22234567899999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccC
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSAN 939 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 939 (1117)
.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.++..... ...
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-----~~~ 151 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-----KKI 151 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-----Ccc
Confidence 999876542 3489999999999999999999999 9999999999999999999999999998765431 112
Q ss_pred CccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 940 PQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
....++..|+|||++.+..++.++||||+|+++|+|++|+.||...... .. ...+...... .....+...+
T Consensus 152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~-~~~~~~~~~~-------~~~~~~~~~~ 222 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VE-KEELKRRTLE-------MAVEYPDKFS 222 (277)
T ss_pred ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-cc-HHHHHhcccc-------ccccCCccCC
Confidence 2346788999999998888999999999999999999999999653221 11 1111111111 0112233344
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
..+.++++. |++.+|++|| ++.++++
T Consensus 223 ~~~~~li~~------~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 223 PEAKDLCEA------LLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHHHH------HccCChhHccCCCcccHHHHHh
Confidence 566666665 9999999999 5665654
No 342
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=4.8e-31 Score=296.16 Aligned_cols=200 Identities=26% Similarity=0.326 Sum_probs=166.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
++|++.+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999864 688999999865322 233568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-CCcceeccccccccccCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-RYESCLADFGLARLVEDD 931 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfGla~~~~~~ 931 (1117)
|++ +++.+++..... ...++..+..++.||+.||+|||++ +++||||||+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 577777654332 2367888899999999999999999 9999999999999985 557899999999765432
Q ss_pred CCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
. .......+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||..
T Consensus 157 ~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 157 V----RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred c----cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 1 11223467889999998865 4578999999999999999999999964
No 343
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=4.2e-31 Score=296.01 Aligned_cols=251 Identities=23% Similarity=0.294 Sum_probs=194.6
Q ss_pred CCCCCCeeeecCCeEEEEEEc----CCCcEEEEEEeecCC----ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCce
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL----PSGLTVAVKRFRASD----KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 847 (1117)
+|++.+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 377889999999999999875 368999999987532 22345688899999999 599999999999998999
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 9999999999999998764 2378899999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCCccccCCccccccccCChhhhcc--CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCC
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANM--TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKD 1005 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1117)
...... .......|+..|+|||.+.. ..++.++||||||+++|+|++|+.||..... ...............
T Consensus 155 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~~-- 228 (290)
T cd05613 155 FHEDEV---ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSE-- 228 (290)
T ss_pred cccccc---cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhccC--
Confidence 543211 12224568899999998865 3467899999999999999999999964211 122223222222221
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
+..+...+..+.++++. |++.+|++|| ++.++..
T Consensus 229 ------~~~~~~~~~~~~~ll~~------~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 ------PPYPQEMSALAKDIIQR------LLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ------CCCCccCCHHHHHHHHH------HhcCCHHHhcCCCCCCHHHHHc
Confidence 11222334455666655 9999999997 5566544
No 344
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-32 Score=278.87 Aligned_cols=198 Identities=24% Similarity=0.366 Sum_probs=170.2
Q ss_pred CeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 782 NIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
+.||+|+||.|--+. ..+|.+||||++.+.......++-+|++++... .|+||+++++||+++...|+|||-|.||.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 679999999998864 678999999999888777788899999999999 599999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC---cceeccccccccccCCCC---
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY---ESCLADFGLARLVEDDSG--- 933 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~---~~kl~DfGla~~~~~~~~--- 933 (1117)
...++.+.. +.+.++.++.++|+.||+|||.+ ||.|||+||+|||-.+.. .+|||||.++.-......
T Consensus 164 LshI~~~~~---F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 164 LSHIQKRKH---FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred HHHHHHhhh---ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 999987643 89999999999999999999999 999999999999986543 579999988754432211
Q ss_pred CccccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 934 GSFSANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
.......+.+|+..|||||+.. ...|+.+.|.||+|||+|-|++|.+||.+.
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 1222334678999999999763 356899999999999999999999999763
No 345
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=2.3e-31 Score=293.65 Aligned_cols=248 Identities=24% Similarity=0.310 Sum_probs=193.8
Q ss_pred eeecCCeEEEEEEcC-CCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 784 IGQGRSGIVYKVTLP-SGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
||+|+||.||++... +|+.||+|++..... ...+.+.+|++++++++||||+++++.+...+..|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999865 489999999875433 3445788999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc----
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS---- 935 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~---- 935 (1117)
.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||++..........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99997643 489999999999999999999999 99999999999999999999999999987654321100
Q ss_pred cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccC
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQ 1015 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1015 (1117)
........++..|+|||......++.++||||||+++||+++|+.||.... ................. .
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~-----~- 223 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----PEEIFQNILNGKIEWPE-----D- 223 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCcCCCc-----c-
Confidence 112234567889999999988889999999999999999999999996432 12222222221111110 0
Q ss_pred CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHH
Q 001238 1016 GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLR 1054 (1117)
Q Consensus 1016 ~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~ 1054 (1117)
...+..+..+++. |++.+|++||++.++.+.++
T Consensus 224 ~~~~~~~~~~i~~------~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 224 VEVSDEAIDLISK------LLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ccCCHHHHHHHHH------HhcCCHhhcCCCccHHHHhc
Confidence 0123345555554 99999999999966666554
No 346
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=2.8e-31 Score=301.16 Aligned_cols=201 Identities=21% Similarity=0.210 Sum_probs=165.0
Q ss_pred CCCCeeeecCCeEEEEEEcCCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 779 TAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 779 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
.+++.+|.|+++.||++.. +++.||||++... .....+.+.+|++++++++||||+++++++.+.+..+++|||+++
T Consensus 5 ~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 3445556666666666555 7899999998754 333456799999999999999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC--
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG-- 934 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~-- 934 (1117)
|++.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+|++|||.+.........
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 84 GSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999999986532 2388999999999999999999999 9999999999999999999999999998765432111
Q ss_pred -ccccCCccccccccCChhhhcc--CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 935 -SFSANPQFAGSYGYIAPEYANM--TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 935 -~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.........++..|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~ 212 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKD 212 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 0111233457889999999865 4588999999999999999999999964
No 347
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=7.1e-31 Score=297.85 Aligned_cols=251 Identities=26% Similarity=0.352 Sum_probs=193.5
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
+.|...+.||+|+||.||+|+. .++..||+|++..... .....+.+|++++++++|||++++++++.+++..++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 3477788999999999999985 4688999999875422 22346888999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+++ ++.+.+.... ..+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 105 e~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~- 177 (317)
T cd06635 105 EYCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP- 177 (317)
T ss_pred eCCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC-
Confidence 99975 7777665432 3489999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCccccCCccccccccCChhhhc---cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYAN---MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.....+++.|+|||++. .+.++.++|||||||++|||++|+.||... ................
T Consensus 178 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~-----~~~~~~~~~~~~~~~~-- 243 (317)
T cd06635 178 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALYHIAQNESPT-- 243 (317)
T ss_pred -------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHhccCCC--
Confidence 12346888999999873 456889999999999999999999998642 1111111222111110
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
......+..+.+++. .|++.+|.+||++.++++......
T Consensus 244 ----~~~~~~~~~l~~li~------~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 244 ----LQSNEWSDYFRNFVD------SCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ----CCCccccHHHHHHHH------HHccCCcccCcCHHHHHhChhhhc
Confidence 011122334444444 599999999999999998655443
No 348
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=7.1e-31 Score=296.08 Aligned_cols=202 Identities=32% Similarity=0.400 Sum_probs=168.0
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCC-----
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRK----- 845 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 845 (1117)
..++|++.+.||+|+||.||+|..+ +|+.||+|+++... ......+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567999999999999999999864 58899999987543 223356788999999999999999999887654
Q ss_pred -----ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceec
Q 001238 846 -----TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLA 920 (1117)
Q Consensus 846 -----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 920 (1117)
..++||||+++ ++...+.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeC
Confidence 78999999986 6666665432 3489999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 921 DFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 921 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
|||++........ .......++..|+|||.+.. ..++.++|||||||++|||++|++||..
T Consensus 159 dfg~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~ 220 (302)
T cd07864 159 DFGLARLYNSEES---RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA 220 (302)
T ss_pred cccccccccCCcc---cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999987654321 11223356788999998764 4578999999999999999999999964
No 349
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=321.01 Aligned_cols=218 Identities=25% Similarity=0.295 Sum_probs=187.6
Q ss_pred HHHhccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeec---CCccchHHHHHHHHHHhccCCCCcceEEeeeecCCc
Q 001238 771 IGDATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRA---SDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 771 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 846 (1117)
+.....+|.+.++||+|+||.|..++++ +++.||+|++.+ -...+...|..|-.+|..-..+=||+++-.|.++.+
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~ 149 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY 149 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence 3344578999999999999999999864 588999999876 234456679999999999889999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLAR 926 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 926 (1117)
+|+|||||+||+|-.++.... .++++.++.++..|+-||+-+|+. |+|||||||+|||+|..|++||+|||.+-
T Consensus 150 LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred eEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHH
Confidence 999999999999999998764 489999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCccccCCccccccccCChhhhcc-----CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHh
Q 001238 927 LVEDDSGGSFSANPQFAGSYGYIAPEYANM-----TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLK 1001 (1117)
Q Consensus 927 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 1001 (1117)
....++ .......+|||-|.+||+++. +.|++.+|.||+||++|||+.|..||.. +.+++...+++.
T Consensus 224 km~~dG---~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-----dslveTY~KIm~ 295 (1317)
T KOG0612|consen 224 KMDADG---TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-----DSLVETYGKIMN 295 (1317)
T ss_pred hcCCCC---cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-----HHHHHHHHHHhc
Confidence 776432 234556799999999998853 6789999999999999999999999964 355555555554
Q ss_pred c
Q 001238 1002 S 1002 (1117)
Q Consensus 1002 ~ 1002 (1117)
.
T Consensus 296 h 296 (1317)
T KOG0612|consen 296 H 296 (1317)
T ss_pred h
Confidence 3
No 350
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=8e-31 Score=291.53 Aligned_cols=241 Identities=22% Similarity=0.269 Sum_probs=184.5
Q ss_pred eeeecCCeEEEEEEc-CCCcEEEEEEeecCCcc---chHHHHHHHHH---HhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 783 IIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKI---STGAFSSEIAT---LSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~---l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
.||+|+||.||+|.. .+++.||+|.+...... ....+..|..+ ++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999975 45889999998754211 11223444443 444579999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+|+|.+++... +.+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||+++.....
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---- 150 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---- 150 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----
Confidence 99999988653 3489999999999999999999998 9999999999999999999999999999765322
Q ss_pred cccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCccc
Q 001238 936 FSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKL 1014 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1014 (1117)
......|+..|+|||.+..+ .++.++||||+|+++|||++|+.||......... ..... ... ..+.+
T Consensus 151 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~~~~~-~~~-------~~~~~ 218 (278)
T cd05606 151 --KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRM-TLT-------MAVEL 218 (278)
T ss_pred --CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--HHHHH-hhc-------cCCCC
Confidence 12234689999999998744 6899999999999999999999999753222111 11111 111 11222
Q ss_pred CCCCchhHHHHHHHHhHhhhccCCCCCCCC-----CHHHHHH
Q 001238 1015 QGHPDTQIQEMLQALGISLLCTSNRAEDRP-----TMKDVAA 1051 (1117)
Q Consensus 1015 ~~~~~~~~~~~l~~~~i~~~C~~~~p~~RP-----s~~~v~~ 1051 (1117)
+...+..+.++++. |+..+|++|| ++.++++
T Consensus 219 ~~~~s~~~~~li~~------~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 PDSFSPELRSLLEG------LLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCcCCHHHHHHHHH------HhhcCHHhccCCCCCCHHHHHh
Confidence 33334455666655 9999999999 8888875
No 351
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=251.65 Aligned_cols=223 Identities=26% Similarity=0.337 Sum_probs=180.2
Q ss_pred CCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
.|...++||+|.||+||+|+ +.+++.||+|+++-.+ +.......+|+-+++.++|.|||++++....+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 35556789999999999998 4568899999987543 33345678999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
|. .+|..+.... .+.++.+.+..++.|+++|+.|+|++ .+.|||+||+|.++..+|+.|++|||+++.++-.
T Consensus 83 cd-qdlkkyfdsl--ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip-- 154 (292)
T KOG0662|consen 83 CD-QDLKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-- 154 (292)
T ss_pred hh-HHHHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc--
Confidence 94 5788877654 35589999999999999999999999 9999999999999999999999999999987542
Q ss_pred CccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 934 GSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
.......+.|.+|.+|+++.+ +-|++..|+||.||++.|+.. |++-|.+ .++....+++.+.-..+.+.-+
T Consensus 155 --vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg-----~dvddqlkrif~~lg~p~ed~w 227 (292)
T KOG0662|consen 155 --VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-----NDVDDQLKRIFRLLGTPTEDQW 227 (292)
T ss_pred --eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC-----CcHHHHHHHHHHHhCCCccccC
Confidence 233445578999999998765 558899999999999999998 5555543 3445555555554444544444
Q ss_pred ccc
Q 001238 1012 PKL 1014 (1117)
Q Consensus 1012 ~~l 1014 (1117)
|.+
T Consensus 228 ps~ 230 (292)
T KOG0662|consen 228 PSM 230 (292)
T ss_pred Ccc
Confidence 443
No 352
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=9.6e-31 Score=287.45 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=202.4
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||++... +++.||+|++..... ...+.+.+|++++++++|||++++++.+...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999854 688999999976533 4556788999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 854 MPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
+++++|.+++.... ....+++.++..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999987642 124589999999999999999999999 99999999999999999999999999998765432
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
.......|++.|+|||......++.++||||+|+++|+|++|+.||.... ............. +
T Consensus 158 ----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-------~ 221 (258)
T cd08215 158 ----DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQY-------P 221 (258)
T ss_pred ----ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCCC-------C
Confidence 12234568899999999988889999999999999999999999996421 2222222222211 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.++...+..+.++++. |+..+|++||++.++++
T Consensus 222 ~~~~~~~~~~~~~i~~------~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 PIPSQYSSELRNLVSS------LLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCCHHHHHHHHH------HcCCChhhCcCHHHHhc
Confidence 2222334455555554 99999999999999876
No 353
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=4.2e-31 Score=295.67 Aligned_cols=255 Identities=22% Similarity=0.276 Sum_probs=197.5
Q ss_pred CCCCCCeeeecCCeEEEEEEc----CCCcEEEEEEeecCC----ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCce
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL----PSGLTVAVKRFRASD----KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 847 (1117)
+|++.+.||+|+||.||++.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++.+...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999863 357889999987432 22345688899999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999999988653 2478899999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCC--CCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCC
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTK--ISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKD 1005 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1117)
...... .......|+..|+|||...+.. .+.++||||||+++|||++|+.||..... ........+......
T Consensus 155 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~-- 228 (288)
T cd05583 155 FLAEEE---ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKSK-- 228 (288)
T ss_pred cccccc---cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHccC--
Confidence 543221 1122346889999999987654 78899999999999999999999953211 111222222222221
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
+..+...+..+.+++.. |++.+|++||++.++.+.++.
T Consensus 229 ------~~~~~~~~~~l~~li~~------~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 ------PPFPKTMSAEARDFIQK------LLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ------CCCCcccCHHHHHHHHH------HhcCCHhhccCcchHHHHhcC
Confidence 11222233445555554 999999999999988877654
No 354
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-32 Score=285.57 Aligned_cols=258 Identities=27% Similarity=0.390 Sum_probs=193.7
Q ss_pred cCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCc--c-----chHHHHHHHHHHhccCCCCcceEEeeeec-CCc
Q 001238 776 RSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDK--I-----STGAFSSEIATLSRIRHRNIVRLLGWGAN-RKT 846 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~--~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 846 (1117)
++|-..+.||+|||+.||+|. ....+.||||+-..... . -.+...+|.++-+.+.||.||++|+|+.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 567788899999999999986 55678999998653311 1 11235689999999999999999999864 567
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC---CCcceecccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE---RYESCLADFG 923 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfG 923 (1117)
+|-|.|||+|.+|+-+++.++ .+++.+++.|+.||+.||.||.+. .|+|||-|+||.|||+-. -|.+||+|||
T Consensus 543 FCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 889999999999999998764 489999999999999999999986 569999999999999953 4789999999
Q ss_pred ccccccCCCCC---ccccCCccccccccCChhhhccC----CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHH
Q 001238 924 LARLVEDDSGG---SFSANPQFAGSYGYIAPEYANMT----KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWV 996 (1117)
Q Consensus 924 la~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~ 996 (1117)
+++...++... ........+||.+|++||++--+ +.+.|+||||.|||+|+.+.|+.||... ..-..++
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn----qsQQdIL 694 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN----QSQQDIL 694 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc----hhHHHHH
Confidence 99988765443 22344578999999999977543 5688999999999999999999999632 1111111
Q ss_pred HHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHH
Q 001238 997 RDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVA 1050 (1117)
Q Consensus 997 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~ 1050 (1117)
....-.. ..++--|. ........+.+++. |+++.-++|.+..++.
T Consensus 695 qeNTIlk--AtEVqFP~-KPvVsseAkaFIRR------CLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 695 QENTILK--ATEVQFPP-KPVVSSEAKAFIRR------CLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhhchhc--ceeccCCC-CCccCHHHHHHHHH------HHHhhhhhhhhHHHHc
Confidence 1110000 01111011 11223345555555 9999999998776664
No 355
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=5.8e-31 Score=294.37 Aligned_cols=198 Identities=31% Similarity=0.396 Sum_probs=168.6
Q ss_pred CCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecC--CceEEEEE
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANR--KTKLLFYD 852 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 852 (1117)
|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999865 58899999998653 33345688999999999999999999999888 78999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|+++ +|.+++.... ..+++..++.++.|+++|++|||+. +++|+||||+||++++++.++++|||++.......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9975 8888876542 3489999999999999999999999 99999999999999999999999999998765432
Q ss_pred CCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..
T Consensus 155 ~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~ 204 (287)
T cd07840 155 S---ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQG 204 (287)
T ss_pred c---ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 1 12233457889999997654 4578999999999999999999999965
No 356
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=6e-31 Score=289.73 Aligned_cols=243 Identities=23% Similarity=0.284 Sum_probs=186.1
Q ss_pred CeeeecCCeEEEEEEc-CCCcEEEEEEeecCCcc---chHHHHHHHHHH-hccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKI---STGAFSSEIATL-SRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+|+||.||+|.. .+|+.||+|+++..... ....+..|..++ ...+|||++++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5699999999999975 46899999998754321 122344555544 445899999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
++|.+++... +.+++..+.+++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+++....
T Consensus 82 ~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 82 GDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 9999999764 2488999999999999999999999 999999999999999999999999999876432
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
.....++..|+|||...+..++.++||||+|+++|||++|..||.... ................ +....
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~----~~~~~ 218 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-----PDAVFDNILSRRINWP----EEVKE 218 (260)
T ss_pred --cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcccCCC----Ccccc
Confidence 223468889999999988888999999999999999999999996421 1122222221111111 11122
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
..+..+.++++. |++.+|++||++.++.+.+
T Consensus 219 ~~~~~~~~~i~~------~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 219 FCSPEAVDLINR------LLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred cCCHHHHHHHHH------HccCCHHHccCCCcHHHHH
Confidence 233455555554 9999999999876665544
No 357
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=5.6e-31 Score=301.51 Aligned_cols=203 Identities=29% Similarity=0.395 Sum_probs=168.2
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC--CccchHHHHHHHHHHhcc-CCCCcceEEeeeecC--Cce
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS--DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANR--KTK 847 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~--~~~ 847 (1117)
..++|++.+.||+|+||.||+|... +|+.||+|++... .......+.+|+++++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467889999999999999999854 6889999988542 222345677899999999 999999999987654 357
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||++ ++|..++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 5898888653 378999999999999999999998 999999999999999999999999999987
Q ss_pred ccCCCCC-ccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 928 VEDDSGG-SFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 928 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
....... .........||..|+|||.+.. ..++.++||||||+++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~ 215 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPG 215 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCC
Confidence 6543211 0112234568999999997754 5678999999999999999999999964
No 358
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.9e-31 Score=319.13 Aligned_cols=201 Identities=19% Similarity=0.259 Sum_probs=158.8
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC--CCcEEEEE------------------EeecCCccchHHHHHHHHHHhccCCCC
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP--SGLTVAVK------------------RFRASDKISTGAFSSEIATLSRIRHRN 833 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~H~n 833 (1117)
...+|++.+.||+|+||+||++..+ .+..+++| .++ ........+.+|++++++++|||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 4568999999999999999997642 22222222 111 11122346889999999999999
Q ss_pred cceEEeeeecCCceEEEEEecCCCChhhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEE
Q 001238 834 IVRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGEC--AGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILL 911 (1117)
Q Consensus 834 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill 911 (1117)
||++++++...+..|+|+|++. +++..++..... .......++..++.|++.||+|||++ +||||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 9999999999999999999985 466666543211 12234567788999999999999999 99999999999999
Q ss_pred cCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCC
Q 001238 912 GERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPV 982 (1117)
Q Consensus 912 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~ 982 (1117)
+.++.+||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|..++
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKERE---AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred CCCCCEEEEeCCCceecCcccc---cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999987653211 1223457999999999999999999999999999999999987644
No 359
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=6e-31 Score=293.65 Aligned_cols=197 Identities=27% Similarity=0.371 Sum_probs=169.3
Q ss_pred CCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCcc--chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKI--STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
|++.+.||+|++|.||+|... +++.+|+|++...... ....+.+|++++++++||||+++++++...+..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999864 6889999998754322 3467888999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
++ ++.+++.... ..+++.++..++.|+++||+|||+. +|+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-- 152 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-- 152 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--
Confidence 75 8877776542 3489999999999999999999999 99999999999999999999999999998765432
Q ss_pred ccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 935 SFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......++..|+|||.+... .++.++||||+|+++|+|++|+.||..
T Consensus 153 --~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 201 (283)
T cd05118 153 --RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPG 201 (283)
T ss_pred --ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 122234678899999988766 789999999999999999999999964
No 360
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=1.1e-30 Score=291.35 Aligned_cols=195 Identities=26% Similarity=0.300 Sum_probs=162.3
Q ss_pred CCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc-cchHHHHHHHHHHhccC-CCCcceEEeeeecC--CceEEEEE
Q 001238 778 LTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK-ISTGAFSSEIATLSRIR-HRNIVRLLGWGANR--KTKLLFYD 852 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~~~lv~e 852 (1117)
|++.+.||+|+||.||+|.. .+++.||+|+++.... .......+|+.+++++. |||++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56778999999999999974 4688999999875422 22233457899999885 99999999999887 88999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
|++ |++.+.+.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 997 57777776532 3489999999999999999999999 9999999999999999 999999999998764321
Q ss_pred CCccccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 933 GGSFSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
......++..|+|||+.. ...++.++||||+||++|||++|..||..
T Consensus 154 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~ 201 (282)
T cd07831 154 -----PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG 201 (282)
T ss_pred -----CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCC
Confidence 122346789999999764 45678899999999999999999999965
No 361
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-31 Score=319.57 Aligned_cols=260 Identities=27% Similarity=0.414 Sum_probs=202.3
Q ss_pred CCCCCCeeeecCCeEEEEEEcC----C----CcEEEEEEeecC-CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCc
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP----S----GLTVAVKRFRAS-DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKT 846 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~----~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 846 (1117)
+..+.+.+|+|.||.||+|... . ...||||.++.. ...+.+.+..|+++|+.+ +||||+.++|+|...+.
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~ 376 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP 376 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence 4466679999999999998631 1 457999998754 334567899999999999 59999999999999999
Q ss_pred eEEEEEecCCCChhhhhcCCC------CC-------CCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC
Q 001238 847 KLLFYDYMPNGTLGMLLHDGE------CA-------GLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE 913 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~------~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~ 913 (1117)
.++|+||++.|+|.++++..+ .. ..+...+...++.|||.|++||++. ++||||+.++|||+++
T Consensus 377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITK 453 (609)
T ss_pred eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecC
Confidence 999999999999999998765 00 1378889999999999999999999 9999999999999999
Q ss_pred CCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhH
Q 001238 914 RYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHV 992 (1117)
Q Consensus 914 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~ 992 (1117)
+..+||+|||+|+................ -...|||||.+....|+.++|||||||++||+++ |..||.+. +....+
T Consensus 454 ~~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~-~~~~~l 531 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI-PPTEEL 531 (609)
T ss_pred CCEEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC-CcHHHH
Confidence 99999999999997654332211111111 3456999999999999999999999999999999 99999651 212233
Q ss_pred HHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 993 IQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
.++ ++.+... ..+......+..+++ .||+.+|++||++.++++.++...
T Consensus 532 ~~~----l~~G~r~------~~P~~c~~eiY~iM~------~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 532 LEF----LKEGNRM------EQPEHCSDEIYDLMK------SCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHH----HhcCCCC------CCCCCCCHHHHHHHH------HHhCCCcccCCCHHHHHHHHHHHH
Confidence 333 3332211 112222334444444 499999999999999999998854
No 362
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=9.8e-31 Score=293.87 Aligned_cols=253 Identities=24% Similarity=0.387 Sum_probs=191.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCc-cchHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDK-ISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.++|++.+.||+|+||.||+|.+.+ ++.||||+++.... .....+..|++++.+.. ||||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3568889999999999999998754 89999999975432 23445667887777764 999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||++ +++.++..... +.+++..+.+++.|+++|++|||+.. +|+||||+|+||++++++.+||+|||++......
T Consensus 94 e~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9985 46777665532 35899999999999999999999731 8999999999999999999999999999765432
Q ss_pred CCCccccCCccccccccCChhhhccCC----CCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTK----ISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPV 1007 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1117)
. ......++..|+|||.+.... ++.++||||||+++|||++|+.||.... ...+.............
T Consensus 169 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~ 239 (296)
T cd06618 169 K-----AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK----TEFEVLTKILQEEPPSL 239 (296)
T ss_pred C-----cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch----hHHHHHHHHhcCCCCCC
Confidence 1 112335788999999987543 7899999999999999999999996421 11222222222221110
Q ss_pred cccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1008 EVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1008 ~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
. .....+..+.+++. .|++.+|++||++.++++.
T Consensus 240 ~-----~~~~~~~~l~~li~------~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 240 P-----PNEGFSPDFCSFVD------LCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred C-----CCCCCCHHHHHHHH------HHccCChhhCCCHHHHhcC
Confidence 0 01122334444444 4999999999999999874
No 363
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=6.7e-31 Score=288.51 Aligned_cols=248 Identities=24% Similarity=0.334 Sum_probs=197.5
Q ss_pred CCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+|++.+.||+|+||.||++.. .+++.+|+|++.... ......+.+|++++++++||||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477889999999999999864 468899999987542 23345678899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 854 MPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
+++++|.+++.+.. ....+++..++.++.|+++||+|||+. +++||||+|+||++++++.+|++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999886632 123488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
......+++.|+|||...+..++.++|+||+|+++|||++|+.||.... ..+......... . +
T Consensus 157 -----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~--~-----~ 219 (256)
T cd08530 157 -----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-----MQDLRYKVQRGK--Y-----P 219 (256)
T ss_pred -----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCC--C-----C
Confidence 1122457889999999998899999999999999999999999996421 111111111111 1 1
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+....+..+..++. .|++.+|++||++.++++
T Consensus 220 ~~~~~~~~~~~~li~------~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 PIPPIYSQDLQNFIR------SMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCchhhCHHHHHHHH------HHcCCCcccCCCHHHHhc
Confidence 112223334444444 499999999999999876
No 364
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=6e-31 Score=301.08 Aligned_cols=199 Identities=24% Similarity=0.373 Sum_probs=167.3
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecC-----Cc
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANR-----KT 846 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 846 (1117)
.++|.+.+.||+|+||+||+|.. .+++.||||+++.. ......++.+|+++++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45789999999999999999974 46899999998753 223345677899999999999999999987644 34
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLAR 926 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 926 (1117)
.++||||+. ++|.+++... +.+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999995 6888888654 3489999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 927 LVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 927 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
...... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||..
T Consensus 157 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 211 (337)
T cd07858 157 TTSEKG----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPG 211 (337)
T ss_pred ccCCCc----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCC
Confidence 764321 11233467889999998764 5688999999999999999999999964
No 365
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=9.1e-31 Score=298.49 Aligned_cols=199 Identities=22% Similarity=0.286 Sum_probs=162.2
Q ss_pred Ceeeec--CCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCC
Q 001238 782 NIIGQG--RSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 782 ~~lg~G--~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+.||+| +||+||++.+ .+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 9999999985 479999999987542 22346788999999999999999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc-
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS- 935 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~- 935 (1117)
+++.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999998765332 388999999999999999999998 99999999999999999999999998654332211110
Q ss_pred --cccCCccccccccCChhhhcc--CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 936 --FSANPQFAGSYGYIAPEYANM--TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 936 --~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
........++..|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQD 212 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 001111235667999999876 3478999999999999999999999965
No 366
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=1.9e-30 Score=290.28 Aligned_cols=197 Identities=28% Similarity=0.348 Sum_probs=165.7
Q ss_pred CCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCcc--chHHHHHHHHHHhcc---CCCCcceEEeeeecCCc-----
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKI--STGAFSSEIATLSRI---RHRNIVRLLGWGANRKT----- 846 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~----- 846 (1117)
|++.+.||+|+||.||+|+.. +++.||+|+++..... ....+.+|+++++++ .||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999875 4899999999754221 234566788877666 59999999999988776
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLAR 926 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 926 (1117)
.+++|||+++ +|.+++..... ..+++..++.++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcce
Confidence 8999999974 78888866432 2489999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 927 LVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 927 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
...... ......++..|+|||++.+..++.++||||||+++|||++|++||..
T Consensus 156 ~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~ 208 (287)
T cd07838 156 IYSFEM-----ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRG 208 (287)
T ss_pred eccCCc-----ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccC
Confidence 764321 11233578899999999988999999999999999999999999865
No 367
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=5.5e-31 Score=301.92 Aligned_cols=201 Identities=24% Similarity=0.353 Sum_probs=165.9
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecC---------
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANR--------- 844 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------- 844 (1117)
..+|++.+.||+|+||.||+|.. .+|+.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 36789999999999999999975 46899999999776655567788999999999999999999866543
Q ss_pred -----CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-CCcce
Q 001238 845 -----KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-RYESC 918 (1117)
Q Consensus 845 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~k 918 (1117)
...++||||++ ++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence 35789999997 5888877543 388999999999999999999999 9999999999999984 55789
Q ss_pred eccccccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 919 LADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 919 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
++|||+++......... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||..
T Consensus 156 l~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~ 221 (342)
T cd07854 156 IGDFGLARIVDPHYSHK-GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAG 221 (342)
T ss_pred ECCcccceecCCccccc-cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999997654321111 11123357889999997654 5678899999999999999999999964
No 368
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=9.6e-31 Score=300.14 Aligned_cols=200 Identities=26% Similarity=0.373 Sum_probs=169.0
Q ss_pred hHHHhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecC--
Q 001238 770 SIGDATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANR-- 844 (1117)
Q Consensus 770 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-- 844 (1117)
++...+++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~ 90 (345)
T cd07877 11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 90 (345)
T ss_pred HHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccc
Confidence 4566788999999999999999999974 578999999987532 22345678899999999999999999987543
Q ss_pred ----CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceec
Q 001238 845 ----KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLA 920 (1117)
Q Consensus 845 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 920 (1117)
...+++++++ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+
T Consensus 91 ~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~ 162 (345)
T cd07877 91 LEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 162 (345)
T ss_pred ccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEe
Confidence 3467888876 78998887653 388999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 921 DFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 921 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
|||+++.... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||..
T Consensus 163 dfg~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 163 DFGLARHTDD-------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cccccccccc-------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999976432 1233467899999998765 5688999999999999999999999964
No 369
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.4e-30 Score=298.54 Aligned_cols=200 Identities=26% Similarity=0.382 Sum_probs=168.8
Q ss_pred hHHHhccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCC-
Q 001238 770 SIGDATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRK- 845 (1117)
Q Consensus 770 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~- 845 (1117)
.+....++|++.+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 9 TIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred hhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 344456789999999999999999997 4578999999986432 222356789999999999999999999887553
Q ss_pred -----ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceec
Q 001238 846 -----TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLA 920 (1117)
Q Consensus 846 -----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 920 (1117)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 358999998 77998887643 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 921 DFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 921 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
|||++...... .....+++.|+|||.+.. ..++.++||||+|+++|++++|+.||..
T Consensus 161 dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 161 DFGLARQTDSE-------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred ecccccccccC-------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999865421 123467889999998865 4588999999999999999999999964
No 370
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=8.3e-31 Score=299.41 Aligned_cols=200 Identities=27% Similarity=0.365 Sum_probs=171.5
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCC-----ceE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRK-----TKL 848 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 848 (1117)
+|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999864 48999999987643 334567899999999999999999999987775 789
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+||||++ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 57888887543 589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
...... ........++..|+|||++.+. .++.++||||+|+++|+|++|+.||..
T Consensus 154 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~ 209 (330)
T cd07834 154 DPDEDE-KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPG 209 (330)
T ss_pred cccccc-cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCC
Confidence 543211 1122345678999999999877 789999999999999999999999965
No 371
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=9.2e-31 Score=291.58 Aligned_cols=251 Identities=23% Similarity=0.350 Sum_probs=199.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 850 (1117)
++|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999754 68999999986532 223456888999999998 99999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999997642 489999999999999999999999 999999999999999999999999999986654
Q ss_pred CCCC----------------ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHH
Q 001238 931 DSGG----------------SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQ 994 (1117)
Q Consensus 931 ~~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~ 994 (1117)
.... .........++..|+|||......++.++||||+|+++|++++|+.||.... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~ 229 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN-----EYL 229 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc-----HHH
Confidence 3211 0122334567899999999988889999999999999999999999997431 111
Q ss_pred HHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCH----HHHHH
Q 001238 995 WVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTM----KDVAA 1051 (1117)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~----~~v~~ 1051 (1117)
......... ..++...+..+.++++. |++.+|++||++ .++++
T Consensus 230 ~~~~~~~~~--------~~~~~~~~~~~~~li~~------~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 TFQKILKLE--------YSFPPNFPPDAKDLIEK------LLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHhcC--------CCCCCccCHHHHHHHHH------HhcCCHhhCCCcccCHHHHhc
Confidence 122222111 11222233445555554 999999999999 66653
No 372
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=2.4e-30 Score=292.24 Aligned_cols=247 Identities=26% Similarity=0.350 Sum_probs=190.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC---ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD---KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
+.|+..+.||+|+||.||+|... +++.||+|.+.... .....++.+|+++++.++|+|++++++++...+..++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777788999999999999854 57899999986432 223346788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
||+. |++.+.+.... ..+++.++..++.|++.|+.|||+. +++||||||+||+++.++.++++|||++.....
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~- 167 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 167 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC-
Confidence 9996 57777665432 3478999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCccccCCccccccccCChhhhc---cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYAN---MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.....+++.|+|||.+. ...++.++|||||||++|||++|+.||.... ............. ..
T Consensus 168 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~--~~ 233 (308)
T cd06634 168 -------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNES--PA 233 (308)
T ss_pred -------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc-----HHHHHHHHhhcCC--CC
Confidence 12346888999999874 3567889999999999999999999985421 1111111111111 00
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
......+..+.++++. ||+.+|++||++.+++..-
T Consensus 234 ----~~~~~~~~~~~~li~~------cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 234 ----LQSGHWSEYFRNFVDS------CLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred ----cCcccccHHHHHHHHH------HhhCCcccCCCHHHHhhCc
Confidence 0112233345555554 9999999999999998753
No 373
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=287.62 Aligned_cols=194 Identities=26% Similarity=0.413 Sum_probs=171.2
Q ss_pred CCeeeecCCeEEEEEE-cCCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCC
Q 001238 781 GNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNG 857 (1117)
Q Consensus 781 ~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 857 (1117)
.++||.|-||+||-|+ .++|+.||||++.+.. .....++++|++++++++||.||.+-..|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 5789999999999997 4679999999997642 233467999999999999999999999999999999999999777
Q ss_pred ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC---CcceeccccccccccCCCCC
Q 001238 858 TLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER---YESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 858 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~DfGla~~~~~~~~~ 934 (1117)
-|..++.... +++++.....++.||+.||.|||.+ +|||+|+||+|||+... ..+||||||.||.+....
T Consensus 649 MLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-- 721 (888)
T KOG4236|consen 649 MLEMILSSEK--GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-- 721 (888)
T ss_pred HHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhh--
Confidence 7777776543 5699999999999999999999999 99999999999999643 578999999999987532
Q ss_pred ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 935 SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
-+...+||+.|+|||+++.+.|...-|+||.||++|--++|..||..
T Consensus 722 ---FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 722 ---FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred ---hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence 23467899999999999999999999999999999999999999964
No 374
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=2e-30 Score=296.27 Aligned_cols=201 Identities=26% Similarity=0.362 Sum_probs=164.2
Q ss_pred CCCCCCeeeecCCeEEEEEEcC-C--CcEEEEEEeecC--CccchHHHHHHHHHHhcc-CCCCcceEEeeeec----CCc
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLP-S--GLTVAVKRFRAS--DKISTGAFSSEIATLSRI-RHRNIVRLLGWGAN----RKT 846 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~-~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~ 846 (1117)
+|++.+.||+|+||.||++... + +..||+|++... .....+.+.+|+++++++ .||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778889999999999999854 3 778999998643 222345678899999999 59999999986533 245
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLAR 926 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 926 (1117)
.++++||+. ++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 688899985 6888888653 3489999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 927 LVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 927 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.................||..|+|||+..+ ..++.++||||+||++|+|++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~ 212 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKG 212 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence 765432221122234578999999998765 5689999999999999999999999964
No 375
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.2e-30 Score=299.04 Aligned_cols=194 Identities=26% Similarity=0.373 Sum_probs=163.3
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCC------
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRK------ 845 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 845 (1117)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++... ......+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 46899999999999999999985 468999999987532 222346789999999999999999999876543
Q ss_pred ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
..++|+||+. .++..+... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMGH-----PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEecccc-cCHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 4589999996 467665432 388999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+
T Consensus 165 ~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 165 RHADA-------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred cCCCC-------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 76432 1223467889999998865 4688999999999999999999999975
No 376
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=9.2e-32 Score=273.09 Aligned_cols=254 Identities=21% Similarity=0.275 Sum_probs=191.4
Q ss_pred hccCCCC-CCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeec----CCc
Q 001238 774 ATRSLTA-GNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGAN----RKT 846 (1117)
Q Consensus 774 ~~~~~~~-~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~ 846 (1117)
.+++|++ -++||-|-.|.|-.+. ..+|+.+|+|++... ...++|++.--.. .|||||.++++|.+ ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 3455655 3679999999999875 457899999998643 3457888874444 79999999998765 345
Q ss_pred eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC---CCcceecccc
Q 001238 847 KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE---RYESCLADFG 923 (1117)
Q Consensus 847 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfG 923 (1117)
+.+|||.|+||.|...++++.. ..+++.++..|+.||+.|+.|||+. .|+||||||+|+|... +..+||+|||
T Consensus 134 LLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccc
Confidence 6789999999999999988654 4599999999999999999999999 9999999999999974 4578999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcC
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSK 1003 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 1003 (1117)
+|+.-... ....+.+-|+.|.|||++...+|+...|+||+||++|-|++|.+||.... +..+..-++..++..
T Consensus 210 FAK~t~~~-----~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~h--g~aispgMk~rI~~g 282 (400)
T KOG0604|consen 210 FAKETQEP-----GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH--GLAISPGMKRRIRTG 282 (400)
T ss_pred cccccCCC-----ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccC--CccCChhHHhHhhcc
Confidence 99875432 23445678999999999999999999999999999999999999997542 233333344333322
Q ss_pred CCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1004 KDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1004 ~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
. .+.-+++. .+.++..++ ++...+..+|.+|-|+.++++.
T Consensus 283 q--y~FP~pEW-s~VSe~aKd------lIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 283 Q--YEFPEPEW-SCVSEAAKD------LIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred C--ccCCChhH-hHHHHHHHH------HHHHHhcCCchhheeHHHhhcC
Confidence 1 11111111 111122222 3333678899999999998763
No 377
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=1.6e-30 Score=286.35 Aligned_cols=249 Identities=22% Similarity=0.322 Sum_probs=191.6
Q ss_pred CCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecC-----CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRAS-----DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
+|.+.+.||+|+||.||++.... +..+++|+.+.. ......++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47888999999999999997543 455666665432 122334577899999999999999999999999999999
Q ss_pred EEecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 851 YDYMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
|||+++++|.+++... .....+++.+++.++.|+++|++|||+. +++|+||||+||+++. +.++++|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999888642 1234589999999999999999999999 9999999999999975 569999999997764
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
... .......|++.|+|||......++.++||||||+++|+|++|+.||... .............
T Consensus 157 ~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~------ 221 (260)
T cd08222 157 GSC----DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-----NFLSVVLRIVEGP------ 221 (260)
T ss_pred CCc----ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHcCC------
Confidence 322 1222346788999999998888899999999999999999999998531 2222222222211
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.+..+...+..+.++++ .|++.+|++||++.++++
T Consensus 222 -~~~~~~~~~~~~~~li~------~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 -TPSLPETYSRQLNSIMQ------SMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -CCCCcchhcHHHHHHHH------HHhcCChhhCcCHHHHhh
Confidence 11222233334444444 499999999999999876
No 378
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=2e-30 Score=293.75 Aligned_cols=204 Identities=27% Similarity=0.372 Sum_probs=165.8
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCcc--chHHHHHHHHHHhccCCCCcceEEeeeecCC------
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKI--STGAFSSEIATLSRIRHRNIVRLLGWGANRK------ 845 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 845 (1117)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999854 6899999998654221 2345788999999999999999999765433
Q ss_pred --ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 846 --TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 846 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
..++||||+.+ ++...+.... ..+++.++..++.|+++||+|||++ +|+||||||+||++++++.++|+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence 46899999965 6666665432 3489999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCc-------cccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 924 LARLVEDDSGGS-------FSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 924 la~~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+++......... ....+...+++.|+|||.+.+ ..++.++||||||+++|||++|++||.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~ 229 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQG 229 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCC
Confidence 998654322111 112234467889999998764 4588999999999999999999999964
No 379
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.3e-30 Score=296.77 Aligned_cols=197 Identities=25% Similarity=0.375 Sum_probs=167.3
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeec-CCceE
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGAN-RKTKL 848 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~ 848 (1117)
.++++|++.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++.. ....+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 4677899999999999999999974 47899999988643 22234568889999999999999999998865 55788
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
+||||+ +++|.++++.. .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+|||.++..
T Consensus 87 lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 87 FVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred EEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 999998 56888887643 378888889999999999999999 9999999999999999999999999999754
Q ss_pred cCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..
T Consensus 159 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~ 208 (328)
T cd07856 159 DP-------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPG 208 (328)
T ss_pred CC-------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 32 1123467889999998765 5689999999999999999999999965
No 380
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=2.5e-30 Score=288.72 Aligned_cols=197 Identities=25% Similarity=0.370 Sum_probs=167.2
Q ss_pred CCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc-cchHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEEEEec
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK-ISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
|++.+.||+|+||+||+|... +++.||||++..... .......+|+..+++++ ||||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999865 578999999865422 22334567999999998 999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
+|++.+++.... ...+++..+..++.|+++||+|||++ +++|+||+|+||++++++.++|+|||+++......
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-- 153 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-- 153 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC--
Confidence 889988887653 23489999999999999999999999 99999999999999999999999999998664321
Q ss_pred ccccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 935 SFSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
......++..|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~ 201 (283)
T cd07830 154 ---PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPG 201 (283)
T ss_pred ---CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCC
Confidence 123346788999999874 45678999999999999999999999964
No 381
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=2.8e-30 Score=295.63 Aligned_cols=202 Identities=25% Similarity=0.274 Sum_probs=165.9
Q ss_pred cCCC-CCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccc--------------hHHHHHHHHHHhccCCCCcceEEe
Q 001238 776 RSLT-AGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKIS--------------TGAFSSEIATLSRIRHRNIVRLLG 839 (1117)
Q Consensus 776 ~~~~-~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~~ 839 (1117)
++|. +.+.||+|+||+||+|.. .+++.||||+++...... ...+.+|+++++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 457899999999999975 468999999986542211 124678999999999999999999
Q ss_pred eeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCccee
Q 001238 840 WGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCL 919 (1117)
Q Consensus 840 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 919 (1117)
++...+..++||||++ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 9999999999999996 6888888653 3388999999999999999999998 9999999999999999999999
Q ss_pred ccccccccccCCCCC----------ccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 920 ADFGLARLVEDDSGG----------SFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 920 ~DfGla~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+|||+++........ .........++..|+|||.+.+. .++.++||||+||++|||++|+.||..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 236 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999866421100 01112234568899999988654 468999999999999999999999965
No 382
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.8e-30 Score=318.46 Aligned_cols=145 Identities=28% Similarity=0.341 Sum_probs=130.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
++|++.++||+|+||+||+|... +++.||||+++.... .....+.+|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999864 689999999975432 22356889999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccc
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLAR 926 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 926 (1117)
||+++++|.+++... +.+++..+++++.||+.||+|||++ +||||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~---~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY---GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999998754 3478899999999999999999998 99999999999999999999999999986
No 383
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=2.4e-30 Score=288.65 Aligned_cols=197 Identities=31% Similarity=0.401 Sum_probs=169.3
Q ss_pred CCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCC--ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 778 LTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASD--KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
|+..+.||+|+||.||+|... +++.||+|++.... ....+.+..|++++++++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999865 58999999997653 333457788999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
+ ++|.+++.... ..+++..+.+++.|++.||+|||+. +|+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 7 58999987652 3489999999999999999999999 999999999999999999999999999987643221
Q ss_pred ccccCCccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 935 SFSANPQFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
......++..|+|||.+... .++.++||||||+++|||++|+.||..
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 201 (282)
T cd07829 154 ---TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPG 201 (282)
T ss_pred ---ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 22233567889999988766 789999999999999999999999965
No 384
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=6.1e-30 Score=289.54 Aligned_cols=243 Identities=26% Similarity=0.349 Sum_probs=189.0
Q ss_pred CCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 778 LTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
|...+.||+|+||+||+|+. .+|+.||+|++..... ...+.+.+|++++++++|||++++++++.+.+..|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66677899999999999975 4688999999875432 2234678899999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+. |++.+++.... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~---- 172 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSS---- 172 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccC----
Confidence 96 56777665432 3489999999999999999999999 99999999999999999999999999986432
Q ss_pred CccccCCccccccccCChhhhc---cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 934 GSFSANPQFAGSYGYIAPEYAN---MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
......|+..|+|||++. ...++.++|||||||++|||++|+.||.... ....+....... .....
T Consensus 173 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~-----~~~~~~~~~~~~--~~~~~ 241 (313)
T cd06633 173 ----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQND--SPTLQ 241 (313)
T ss_pred ----CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcC--CCCCC
Confidence 122456889999999874 4568889999999999999999999986421 111122211111 11111
Q ss_pred CcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
...++..+++++.. |++.+|.+||++.+++.
T Consensus 242 ----~~~~~~~l~~li~~------~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 242 ----SNEWTDSFRGFVDY------CLQKIPQERPASAELLR 272 (313)
T ss_pred ----ccccCHHHHHHHHH------HccCChhhCcCHHHHhc
Confidence 11223345555554 99999999999999986
No 385
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.8e-30 Score=297.81 Aligned_cols=197 Identities=26% Similarity=0.384 Sum_probs=167.6
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCCc---
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKT--- 846 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--- 846 (1117)
...++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34568999999999999999999864 5889999998653 22234567789999999999999999998766554
Q ss_pred ---eEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccc
Q 001238 847 ---KLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFG 923 (1117)
Q Consensus 847 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 923 (1117)
.++|+||+ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 67999888753 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
++...... .....++..|+|||.+.. ..++.++||||+|+++|||++|+.||..
T Consensus 164 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 164 LARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred cccccccc-------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 99865432 223467889999998765 4678999999999999999999999964
No 386
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-30 Score=272.52 Aligned_cols=265 Identities=21% Similarity=0.310 Sum_probs=203.0
Q ss_pred hHHHhccCCCCCCeeeecCCeEEEEEEcCC------CcEEEEEEeecC-CccchHHHHHHHHHHhccCCCCcceEEeeee
Q 001238 770 SIGDATRSLTAGNIIGQGRSGIVYKVTLPS------GLTVAVKRFRAS-DKISTGAFSSEIATLSRIRHRNIVRLLGWGA 842 (1117)
Q Consensus 770 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 842 (1117)
++.....+++....+-+|.||.||+|.|.+ .+.|-+|.++.. .+.....+..|.-.+....|||+..+.+.+.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 344455678888899999999999996543 345677776643 2333456788999999999999999999876
Q ss_pred cC-CceEEEEEecCCCChhhhhc-----CCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc
Q 001238 843 NR-KTKLLFYDYMPNGTLGMLLH-----DGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE 916 (1117)
Q Consensus 843 ~~-~~~~lv~e~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~ 916 (1117)
++ +..+++|.++.-|+|..++. +......++..+...++.|++.|++|||++ +|||.||..+|.++|+.-+
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhee
Confidence 54 56788899999999999998 333344577778889999999999999999 9999999999999999999
Q ss_pred ceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHH
Q 001238 917 SCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQW 995 (1117)
Q Consensus 917 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~ 995 (1117)
+||+|-.++|.+.+.+.... .........||+||.+....|+.++|||||||++|||+| |+.||.+. +..++..+
T Consensus 435 VkltDsaLSRDLFP~DYhcL--GDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI--DPfEm~~y 510 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCL--GDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI--DPFEMEHY 510 (563)
T ss_pred EEeccchhccccCccccccc--CCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc--CHHHHHHH
Confidence 99999999998876543322 222335678999999999999999999999999999999 99999642 11223333
Q ss_pred HHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 996 VRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
+ +++...... -.+++ ++-.++.. ||+..|++||++++++.-|.++-
T Consensus 511 l----kdGyRlaQP-----~NCPD-eLf~vMac------CWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 511 L----KDGYRLAQP-----FNCPD-ELFTVMAC------CWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred H----hccceecCC-----CCCcH-HHHHHHHH------HHhcCcccCCCHHHHHHHHHHHH
Confidence 3 333222211 12333 33333333 99999999999999999988763
No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.2e-32 Score=266.98 Aligned_cols=203 Identities=27% Similarity=0.340 Sum_probs=168.3
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeec--CCccchHHHHHHHHHHhccCCCCcceEEeeeec--------C
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRA--SDKISTGAFSSEIATLSRIRHRNIVRLLGWGAN--------R 844 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------~ 844 (1117)
..|....+||+|.||+||+|+.+ +|+.||+|++-- ..........+|++++..++|+|++.++..|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34566678999999999999854 578899987643 222233456789999999999999999887743 2
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
...|+||++|+. +|.-++.... ..++..++.+++.++..||.|+|+. .|+|||+||+|+|++.+|.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 347999999965 7777777653 2388999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhc-cCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYAN-MTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
++.+...........+..+.|.+|.+||.+. .+.|+++.|||+.|||+.||.+|.+-+++
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqg 231 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQG 231 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccC
Confidence 9877655444444567788899999999765 57899999999999999999999998875
No 388
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-30 Score=296.08 Aligned_cols=253 Identities=24% Similarity=0.403 Sum_probs=202.0
Q ss_pred HHhccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeec-----C
Q 001238 772 GDATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGAN-----R 844 (1117)
Q Consensus 772 ~~~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-----~ 844 (1117)
.+.+..|.+.+.||+|.+|.||+++ .++|+.+|+|+...... ..++++.|..+++.. .|||++.++|+|.. +
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 3556778999999999999999997 45688999998875433 456788899999888 69999999998753 5
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGL 924 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 924 (1117)
+++|+|||||.+|+.-|+++... ...+.|+....|++.++.|+.+||.. .++|||||-.|||++.++.+|++|||.
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeee
Confidence 78899999999999999998866 55699999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccccCCccccccccCChhhhcc-----CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHH
Q 001238 925 ARLVEDDSGGSFSANPQFAGSYGYIAPEYANM-----TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDH 999 (1117)
Q Consensus 925 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~ 999 (1117)
+..+... ...+.+..||+.|||||++.. ..|+.++|+||+|++..||.-|.+|+-+..+. +..
T Consensus 170 SaQldsT----~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm--------raL 237 (953)
T KOG0587|consen 170 SAQLDST----VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM--------RAL 237 (953)
T ss_pred eeeeecc----cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh--------hhh
Confidence 9887543 245567899999999998864 45788999999999999999999998654331 222
Q ss_pred HhcCCCCccccCcccC--CCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1000 LKSKKDPVEVLDPKLQ--GHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1000 ~~~~~~~~~~~~~~l~--~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+.....+. |.+. ..+...+.+ .+..|+..|.++||++.++++
T Consensus 238 F~IpRNPP----PkLkrp~kWs~~Fnd------FIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 238 FLIPRNPP----PKLKRPKKWSKKFND------FISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ccCCCCCC----ccccchhhHHHHHHH------HHHHHHhhccccCcchhhhcc
Confidence 22222221 1111 112223333 444599999999999888754
No 389
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.4e-31 Score=275.95 Aligned_cols=199 Identities=24% Similarity=0.328 Sum_probs=171.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCcc---chHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKI---STGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 850 (1117)
.+|....+||+|+||.|..+..+ +.+.+|||++++.... +.+.-..|-+++... +-|.+++++.+++.-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 36888899999999999999754 4678999999865222 222334566676666 568999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|||+.||+|-..+++- +.+.+..+.-+|.+||-||-+||++ ||++||+|.+||++|.+|++||+|||+++.-.-
T Consensus 429 MEyvnGGDLMyhiQQ~---GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV---GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHh---cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc
Confidence 9999999998888764 4488889999999999999999999 999999999999999999999999999985432
Q ss_pred CCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 931 DSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+ .....+++|||-|+|||++..++|+..+|.|||||++|||+.|++||++
T Consensus 503 ~----~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 503 D----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred C----CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence 2 1345578999999999999999999999999999999999999999986
No 390
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.2e-29 Score=277.56 Aligned_cols=236 Identities=27% Similarity=0.321 Sum_probs=190.0
Q ss_pred eeecCCeEEEEEEcC-CCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCCh
Q 001238 784 IGQGRSGIVYKVTLP-SGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTL 859 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 859 (1117)
||+|+||.||++... +++.||+|++..... ...+.+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999864 589999999876432 2345788999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccC
Q 001238 860 GMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSAN 939 (1117)
Q Consensus 860 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 939 (1117)
.+++.... .+++..+..++.|+++|+.|+|+. +++|+||||+||+++.++.++++|||.+....... ...
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~ 150 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----SRT 150 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC----Ccc
Confidence 99997653 389999999999999999999998 99999999999999999999999999998764321 122
Q ss_pred CccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 940 PQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
....++..|+|||...+...+.++|+||||+++||+++|+.||.... . ........... ..++...+
T Consensus 151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--~---~~~~~~~~~~~--------~~~~~~~~ 217 (250)
T cd05123 151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED--R---KEIYEKILKDP--------LRFPEFLS 217 (250)
T ss_pred cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--H---HHHHHHHhcCC--------CCCCCCCC
Confidence 34568889999999988888999999999999999999999996421 1 22222222211 11222223
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCCCHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRPTMKD 1048 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RPs~~~ 1048 (1117)
..+.++++. |+..||++||++.+
T Consensus 218 ~~l~~~i~~------~l~~~p~~R~~~~~ 240 (250)
T cd05123 218 PEARDLISG------LLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHH------HhcCCHhhCCCccc
Confidence 445555554 99999999999954
No 391
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3e-30 Score=290.10 Aligned_cols=239 Identities=24% Similarity=0.287 Sum_probs=192.3
Q ss_pred ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
++.|.+...+|.|+|+.|-.+. ..+++..|+|++.... ....+|+.++... +||||+++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 5567788889999999998875 5578899999997652 2345678776666 69999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEE-cCCCcceeccccccccccCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILL-GERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill-~~~~~~kl~DfGla~~~~~~ 931 (1117)
++.|+-+.+.+...+ .....+..|+.+|+.|+.|||++ |+||||+||+|||+ +..++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999998887776543 22267778999999999999999 99999999999999 68899999999999987643
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLD 1011 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1117)
....+-|..|.|||+.....|++++|+||+|+++|+|++|+.||..... + ..+...+...
T Consensus 470 -------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~-~----~ei~~~i~~~-------- 529 (612)
T KOG0603|consen 470 -------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA-G----IEIHTRIQMP-------- 529 (612)
T ss_pred -------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc-h----HHHHHhhcCC--------
Confidence 2334678899999999999999999999999999999999999976322 2 1122222211
Q ss_pred cccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1012 PKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1012 ~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
......+...+++++. |++.||.+||+|.++..
T Consensus 530 -~~s~~vS~~AKdLl~~------LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 530 -KFSECVSDEAKDLLQQ------LLQVDPALRLGADEIGA 562 (612)
T ss_pred -ccccccCHHHHHHHHH------hccCChhhCcChhhhcc
Confidence 1123444566666666 99999999999999876
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-30 Score=249.43 Aligned_cols=214 Identities=27% Similarity=0.372 Sum_probs=172.6
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC-CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS-DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
+....+..||+|++|.|-+.++ .+|+..|+|+++.. ..+..++..+|+.+..+. .+|.+|.++|.....+..++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 3445567899999999988764 57999999999764 334456777888876554 79999999999999999999999
Q ss_pred ecCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 853 YMPNGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
.|+ .+|+.+-++- ...+.+++...-+||..|.+||.|||++. .++|||+||+|||++.+|++|+||||++..+.+.
T Consensus 126 ~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 994 5777655432 23456899999999999999999999986 8999999999999999999999999999887653
Q ss_pred CCCccccCCccccccccCChhhhc----cCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHh
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYAN----MTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLK 1001 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~ 1001 (1117)
.+.+...|...|||||.+. ...|+-|+||||+|+++.||++++.||+. .....+.+++.+.
T Consensus 203 -----iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~----w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 203 -----IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES----WGTPFQQLKQVVE 267 (282)
T ss_pred -----hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc----cCCHHHHHHHHhc
Confidence 2333356888999999875 34789999999999999999999999974 3334455555443
No 393
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=1.3e-29 Score=274.64 Aligned_cols=221 Identities=23% Similarity=0.230 Sum_probs=175.0
Q ss_pred cCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCChhhhhcC
Q 001238 787 GRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLGMLLHD 865 (1117)
Q Consensus 787 G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 865 (1117)
|.||.||++.. .+++.||+|+++... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999975 468999999987543 234556666666899999999999999999999999999999998875
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCccccc
Q 001238 866 GECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGS 945 (1117)
Q Consensus 866 ~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt 945 (1117)
.. .+++..+..++.|+++||+|+|+. +|+||||||+||+++.++.++++|||.+...... .....++
T Consensus 79 ~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-------~~~~~~~ 145 (237)
T cd05576 79 FL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-------CDGEAVE 145 (237)
T ss_pred hc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-------cccCCcC
Confidence 42 389999999999999999999998 9999999999999999999999999988765432 1123457
Q ss_pred cccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHH
Q 001238 946 YGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEM 1025 (1117)
Q Consensus 946 ~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1025 (1117)
..|+|||......++.++||||+|+++|||++|+.|+...... ... .....++...+..+.++
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----------~~~------~~~~~~~~~~~~~~~~l 208 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----------INT------HTTLNIPEWVSEEARSL 208 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----------ccc------ccccCCcccCCHHHHHH
Confidence 7899999998888999999999999999999999887532110 000 00011223334455555
Q ss_pred HHHHhHhhhccCCCCCCCCCHHH
Q 001238 1026 LQALGISLLCTSNRAEDRPTMKD 1048 (1117)
Q Consensus 1026 l~~~~i~~~C~~~~p~~RPs~~~ 1048 (1117)
++. |++.||++||++.+
T Consensus 209 i~~------~l~~dp~~R~~~~~ 225 (237)
T cd05576 209 LQQ------LLQFNPTERLGAGV 225 (237)
T ss_pred HHH------HccCCHHHhcCCCc
Confidence 555 99999999998643
No 394
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-31 Score=284.17 Aligned_cols=199 Identities=28% Similarity=0.348 Sum_probs=176.4
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCC-cEEEEEEeecC---CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSG-LTVAVKRFRAS---DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.++..+..||-||||.|-.++.... ..+|+|++++. +....+.+..|-.+|...+.|.||++|..|.+....|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 3566677899999999999876443 34899988764 3333455778999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|-|-||.+...++++ +.++..++..++..+.+|++|||++ +||+||+||+|.++|.+|-+||.|||.|+.+..+
T Consensus 500 EaClGGElWTiLrdR---g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDR---GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhc---CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 999999999999875 4589999999999999999999999 9999999999999999999999999999998754
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
. ...+++|||.|.|||++..+..+.++|.||+|+++||+++|.+||.+.
T Consensus 574 ~-----KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 574 R-----KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV 622 (732)
T ss_pred C-----ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 2 456789999999999999999999999999999999999999999764
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.2e-29 Score=279.58 Aligned_cols=208 Identities=26% Similarity=0.337 Sum_probs=174.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
.-|..++.||-|+||+|.+++. .+...||+|.+++.+. .....++.|-.||..-..+=||++|-.|.+.+.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 4577788999999999999864 3466799999876543 23345788999999999999999999999999999999
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc---
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV--- 928 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~--- 928 (1117)
||++||++-.+|-+. +.++++.++.++.++.+|+++.|.. |+|||||||+|||||.+|++||+|||++.-+
T Consensus 709 dYIPGGDmMSLLIrm---gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM---GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eccCCccHHHHHHHh---ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceec
Confidence 999999999988765 4588999999999999999999999 9999999999999999999999999997532
Q ss_pred ------cCCCCCc-----------------------------cccCCccccccccCChhhhccCCCCcCCCeeehhhhHH
Q 001238 929 ------EDDSGGS-----------------------------FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLL 973 (1117)
Q Consensus 929 ------~~~~~~~-----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ 973 (1117)
..++... .......+||+.|+|||++....|+..+|.||.|||+|
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 1110000 00011347999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCC
Q 001238 974 EIITGKKPVDASFPDG 989 (1117)
Q Consensus 974 ell~g~~P~~~~~~~~ 989 (1117)
||+.|+.||-...+.+
T Consensus 863 em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHhhCCCCccCCCCCc
Confidence 9999999997765544
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=259.59 Aligned_cols=200 Identities=22% Similarity=0.329 Sum_probs=176.9
Q ss_pred ccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecC---CccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRAS---DKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 849 (1117)
-++|...++||+|+|++|..++++ +.+.||+|++++. +....+.++.|-.+..+- +||.+|.+..+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 468999999999999999999854 5788999999864 444566678888877666 79999999999999999999
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
|.||++||+|--.+++++ .++++.++.+..+|.-||.|||+. ||++||+|.+|||+|.+|++|++|+|+++.--
T Consensus 329 vieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999977776653 499999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
... ....+++|||.|.|||++++.+|...+|.|++||+++||+.|+.||+.
T Consensus 403 ~~g----d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 403 GPG----DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CCC----cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 322 345678999999999999999999999999999999999999999975
No 397
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=9.8e-29 Score=296.79 Aligned_cols=200 Identities=23% Similarity=0.288 Sum_probs=142.7
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-C----CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEee------ee
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-S----GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGW------GA 842 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~------~~ 842 (1117)
..++|.+.++||+|+||.||+|.+. + +..||+|++..... .+....| .+....+.+++.++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4568999999999999999999864 4 68999998764321 1111111 1122222223222221 24
Q ss_pred cCCceEEEEEecCCCChhhhhcCCCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccc
Q 001238 843 NRKTKLLFYDYMPNGTLGMLLHDGECA-----------------GLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVK 905 (1117)
Q Consensus 843 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlk 905 (1117)
.....++||||+++++|.+++...... .......+..++.|+++||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 566789999999999999988754210 0112344568999999999999999 99999999
Q ss_pred cCeEEEcC-CCcceeccccccccccCCCCCccccCCccccccccCChhhhccC----------------------CCCcC
Q 001238 906 SHNILLGE-RYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMT----------------------KISEK 962 (1117)
Q Consensus 906 p~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~ 962 (1117)
|+|||+++ ++.+||+|||+|+....... .......+|++|+|||.+... .++.+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~---~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN---YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc---cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999986 57999999999986543211 223456789999999965322 23456
Q ss_pred CCeeehhhhHHHHHhCCCCCC
Q 001238 963 SDVYSYGVVLLEIITGKKPVD 983 (1117)
Q Consensus 963 ~Dv~SlG~vl~ell~g~~P~~ 983 (1117)
+||||+||++|||+++..|++
T Consensus 360 ~DVwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCc
Confidence 799999999999999877654
No 398
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.1e-28 Score=285.64 Aligned_cols=203 Identities=22% Similarity=0.261 Sum_probs=153.4
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-----------------CCCcEEEEEEeecCCccchHH--------------HHHHH
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-----------------PSGLTVAVKRFRASDKISTGA--------------FSSEI 823 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E~ 823 (1117)
.++|.+.++||+|+||+||+|.. ..++.||||++........++ +..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999853 245789999987543222222 33477
Q ss_pred HHHhccCCCCc-----ceEEeeeec--------CCceEEEEEecCCCChhhhhcCCCC---------------------C
Q 001238 824 ATLSRIRHRNI-----VRLLGWGAN--------RKTKLLFYDYMPNGTLGMLLHDGEC---------------------A 869 (1117)
Q Consensus 824 ~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~ 869 (1117)
.++.+++|.++ ++++++|.. .+..++||||+++++|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 677777653 3567999999999999999874210 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCccccccccC
Q 001238 870 GLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYI 949 (1117)
Q Consensus 870 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~ 949 (1117)
..+++..+..++.|+++||+|+|+. +|+||||||+||+++.++.+||+|||+++....... .......+|+.|+
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---~~~~~g~~tp~Y~ 377 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---FNPLYGMLDPRYS 377 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc---cCccccCCCccee
Confidence 1246788899999999999999999 999999999999999999999999999976543211 1111234578999
Q ss_pred ChhhhccCC--------------------C--CcCCCeeehhhhHHHHHhCCC-CCC
Q 001238 950 APEYANMTK--------------------I--SEKSDVYSYGVVLLEIITGKK-PVD 983 (1117)
Q Consensus 950 aPE~~~~~~--------------------~--~~~~Dv~SlG~vl~ell~g~~-P~~ 983 (1117)
|||.+.... | ..+.||||+||++|||++|.. ||.
T Consensus 378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 999875322 1 235799999999999999885 664
No 399
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-29 Score=263.93 Aligned_cols=197 Identities=23% Similarity=0.311 Sum_probs=168.8
Q ss_pred ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccC-C-C----CcceEEeeeecCCce
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIR-H-R----NIVRLLGWGANRKTK 847 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~----niv~l~~~~~~~~~~ 847 (1117)
+++|.+...+|+|.||.|-++. ...+..||||+++...+ -.++..-|+++++++. + | -+|.+.+||...++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 7899999999999999999974 44588999999986543 2345667999999993 3 3 378888999999999
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC--------------
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-------------- 913 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-------------- 913 (1117)
|+|+|.+ |-|+.+++..+.. .+++.++++.|++|++++++|||+. +++|-|+||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccc
Confidence 9999998 6699999988654 3489999999999999999999999 9999999999999832
Q ss_pred ------CCcceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 914 ------RYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 914 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
...+|++|||-|+..... ....+.|..|.|||++.+-.++.++||||+|||++|+.+|..-|+.
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~-------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEH-------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred eeccCCCcceEEEecCCcceeccC-------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 235789999999876532 2456889999999999999999999999999999999999999875
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=1.1e-27 Score=260.34 Aligned_cols=238 Identities=29% Similarity=0.396 Sum_probs=189.5
Q ss_pred CCeEEEEEEcC-CCcEEEEEEeecCCccc-hHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCChhhhhcC
Q 001238 788 RSGIVYKVTLP-SGLTVAVKRFRASDKIS-TGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLGMLLHD 865 (1117)
Q Consensus 788 ~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 865 (1117)
+||.||+|... +|+.||+|++....... .+.+.+|++.+++++|+||+++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999875 48999999998665444 67899999999999999999999999998999999999999999999876
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCccccc
Q 001238 866 GECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGS 945 (1117)
Q Consensus 866 ~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt 945 (1117)
... +++..+..++.+++++++|||+. +++|+||+|+||++++++.++++|||.+....... ......++
T Consensus 81 ~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~ 149 (244)
T smart00220 81 RGR---LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----LLTTFVGT 149 (244)
T ss_pred ccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----ccccccCC
Confidence 432 78999999999999999999999 99999999999999999999999999998765431 23345688
Q ss_pred cccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHH
Q 001238 946 YGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEM 1025 (1117)
Q Consensus 946 ~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1025 (1117)
..|++||......++.++||||+|+++|++++|..||... .. ....... ........... ....+..+.++
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~-~~---~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~ 220 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD-DQ---LLELFKK-IGKPKPPFPPP----EWKISPEAKDL 220 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-Cc---HHHHHHH-HhccCCCCccc----cccCCHHHHHH
Confidence 8999999998888999999999999999999999999642 11 1122221 11111110000 00022334444
Q ss_pred HHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1026 LQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1026 l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+.+|+..+|++||++.++++
T Consensus 221 ------i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 221 ------IRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred ------HHHHccCCchhccCHHHHhh
Confidence 44599999999999999986
No 401
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-29 Score=286.26 Aligned_cols=247 Identities=25% Similarity=0.371 Sum_probs=187.0
Q ss_pred CCCCCeeeecCCeE-EEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCceEEEEEecC
Q 001238 778 LTAGNIIGQGRSGI-VYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
|.-.+++|.|+-|+ ||+|.. +|+.||||++-.. ..+..++|++.++.- +|||||++++.-.++...|++.|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 34456789999985 699988 6889999998643 234678999999998 6999999999999999999999999
Q ss_pred CCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC---C--Ccceecccccccccc
Q 001238 856 NGTLGMLLHDG-ECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE---R--YESCLADFGLARLVE 929 (1117)
Q Consensus 856 ~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~--~~~kl~DfGla~~~~ 929 (1117)
..+|.+++... ...........+.+..|+++||++||+- +|||||+||+||||+. + .+++|+|||+++.+.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 56999999874 1111111134567889999999999998 9999999999999975 3 578999999999987
Q ss_pred CCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHHHHHhcCCCCcc
Q 001238 930 DDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVRDHLKSKKDPVE 1008 (1117)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1117)
.+. ..........||-+|+|||++....-+.++||||+|||+|+.++ |..||...... -..++........
T Consensus 663 ~~~-sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R-------~~NIl~~~~~L~~ 734 (903)
T KOG1027|consen 663 GGK-SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER-------QANILTGNYTLVH 734 (903)
T ss_pred CCc-chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh-------hhhhhcCccceee
Confidence 653 33344667889999999999998888889999999999999999 59999642111 1122222222211
Q ss_pred ccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1009 VLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1009 ~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
+....+....+ ++-.+++++|..||++.+|+.
T Consensus 735 -----L~~~~d~eA~d------LI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 -----LEPLPDCEAKD------LISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -----eccCchHHHHH------HHHHhcCCCcccCCCHHHHhC
Confidence 11122113333 444499999999999999964
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-27 Score=240.07 Aligned_cols=253 Identities=19% Similarity=0.304 Sum_probs=190.1
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEe-eeecCCceEEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLG-WGANRKTKLLF 850 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~-~~~~~~~~~lv 850 (1117)
-.+.|++.+.+|+|.||.+-.++++ +.+.+|+|-+.+. ....++|.+|.----.+ .|.||+.-|+ .|+..+.++++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3457899999999999999999864 5778999988654 33567899998765555 5899998887 46777888899
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEc--CCCcceeccccccccc
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLG--ERYESCLADFGLARLV 928 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~--~~~~~kl~DfGla~~~ 928 (1117)
|||+|.|+|..-+... | +-+....+++.|+++|++|+|++ .+||||||.+||||- +..++|+||||+.+..
T Consensus 101 qE~aP~gdL~snv~~~---G-igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAA---G-IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eccCccchhhhhcCcc---c-ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccccc
Confidence 9999999999888663 2 77888899999999999999999 999999999999994 3458999999999865
Q ss_pred cCCCCCccccCCccccccccCChhhhccC-----CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcC
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANMT-----KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSK 1003 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~ 1003 (1117)
+.. ....--+..|.+||..... ...+.+|||.||+++|.+++|++||+...-.+....+|..-..+..
T Consensus 174 g~t-------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 174 GTT-------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN 246 (378)
T ss_pred Cce-------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC
Confidence 421 1122345679999976532 3567899999999999999999999876666666666655433322
Q ss_pred CCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1004 KDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1004 ~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
.. -|+.-..+.+...++.+. -+.++|++|--..++..+
T Consensus 247 ~~-----~P~~F~~fs~~a~r~Fkk------~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 247 PA-----LPKKFNPFSEKALRLFKK------SLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred cc-----CchhhcccCHHHHHHHHH------hcCCcccccchhHHHHHH
Confidence 21 122223334445555555 778899999544444443
No 403
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=2.5e-28 Score=238.77 Aligned_cols=203 Identities=22% Similarity=0.313 Sum_probs=168.3
Q ss_pred hccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccC-CCCcceEEeeeecCC--ceEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIR-HRNIVRLLGWGANRK--TKLL 849 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~l 849 (1117)
..++|++.+++|+|.|++||.|. ..+.+.++||+++... .+.+.+|+.+++.++ ||||+++++...++. ...+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 45689999999999999999997 4578899999998643 467899999999996 999999999987764 4579
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC-Ccceeccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER-YESCLADFGLARLV 928 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfGla~~~ 928 (1117)
|+||+.+.+...+... ++...++.++.+++.||+|+|++ ||.|||+||.||++|.. ...+++|+|+|.++
T Consensus 113 iFE~v~n~Dfk~ly~t------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPT------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred HhhhhccccHHHHhhh------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhc
Confidence 9999999887765532 67778889999999999999999 99999999999999965 57899999999988
Q ss_pred cCCCCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHH
Q 001238 929 EDDSGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVI 993 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~ 993 (1117)
.... ...-.+.+..|.-||.+-. ..|+..-|+|||||++..|+..+.||-......+.++
T Consensus 184 Hp~~-----eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLV 244 (338)
T KOG0668|consen 184 HPGK-----EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 244 (338)
T ss_pred CCCc-----eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHH
Confidence 7643 2333456778899997754 6788999999999999999999999954333333333
No 404
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-28 Score=246.53 Aligned_cols=198 Identities=28% Similarity=0.364 Sum_probs=164.5
Q ss_pred CCCeeeecCCeEEEEEEc-CCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCC-----ceEEEE
Q 001238 780 AGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRK-----TKLLFY 851 (1117)
Q Consensus 780 ~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lv~ 851 (1117)
..+.||-|+||.||.+.+ ++|+.||+|++... .-...+++-+|++++..++|.|+...+++..-.. +.|++.
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 346799999999999875 47999999988642 2334567889999999999999998888755432 457888
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|.| ..+|..++.... .++.+.+.-+.+||++||.|||+. +|.||||||.|.|++.+-..||||||+++....+
T Consensus 137 ELm-QSDLHKIIVSPQ---~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 137 ELM-QSDLHKIIVSPQ---ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHH-HhhhhheeccCC---CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 888 457877776543 388889999999999999999999 9999999999999999999999999999987643
Q ss_pred CCCccccCCccccccccCChhhhcc-CCCCcCCCeeehhhhHHHHHhCCCCCCCCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANM-TKISEKSDVYSYGVVLLEIITGKKPVDASFP 987 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~ 987 (1117)
. ....+..+.|..|.|||.+.+ +.|+.+.||||.||++.|++.++.-|+...+
T Consensus 210 ~---~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 210 D---RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred h---hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 2 234456678999999998765 6799999999999999999999998876443
No 405
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3e-27 Score=255.38 Aligned_cols=150 Identities=25% Similarity=0.376 Sum_probs=122.8
Q ss_pred CCCccchhhccchhhHHHh--ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccC--
Q 001238 756 GPPWELTLYNKLDLSIGDA--TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIR-- 830 (1117)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-- 830 (1117)
...+....|+.+ .+++. ..+|.+.++||.|.|++||++. ..+.+.||+|+.+.... -.+....||+++++++
T Consensus 58 ~~dY~kGGYHpV--~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~ 134 (590)
T KOG1290|consen 58 PEDYRKGGYHPV--RIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREG 134 (590)
T ss_pred hhhhhcCCCcee--eccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhc
Confidence 334566667654 34443 3689999999999999999986 45678999999986533 3456678999999984
Q ss_pred ---C---CCcceEEeeeec----CCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCcee
Q 001238 831 ---H---RNIVRLLGWGAN----RKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAIL 900 (1117)
Q Consensus 831 ---H---~niv~l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 900 (1117)
| .+||+++++|.. +.+.|+|+|++ |.+|..++......| ++...+.+|++||+.||+|||++| +||
T Consensus 135 Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrG-lpl~~VK~I~~qvL~GLdYLH~ec--gII 210 (590)
T KOG1290|consen 135 DPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRG-LPLSCVKEICRQVLTGLDYLHREC--GII 210 (590)
T ss_pred CCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCC-CcHHHHHHHHHHHHHHHHHHHHhc--Ccc
Confidence 3 379999998865 45789999999 778888888776666 899999999999999999999998 999
Q ss_pred eeccccCeEEEc
Q 001238 901 HRDVKSHNILLG 912 (1117)
Q Consensus 901 HrDlkp~Nill~ 912 (1117)
|.||||+|||+.
T Consensus 211 HTDlKPENvLl~ 222 (590)
T KOG1290|consen 211 HTDLKPENVLLC 222 (590)
T ss_pred ccCCCcceeeee
Confidence 999999999993
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=8.6e-28 Score=263.68 Aligned_cols=196 Identities=24% Similarity=0.312 Sum_probs=169.3
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCc--------cchHHHHHHHHHHhccC---CCCcceEEeeeec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDK--------ISTGAFSSEIATLSRIR---HRNIVRLLGWGAN 843 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~ 843 (1117)
..|+..+.+|+|+||.|+.+.++. ...|+||.+.+... .....+-.|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 368899999999999999997654 56799998876421 11233567999999997 9999999999999
Q ss_pred CCceEEEEEec-CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccc
Q 001238 844 RKTKLLFYDYM-PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADF 922 (1117)
Q Consensus 844 ~~~~~lv~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 922 (1117)
.+.+|++||-. ++-+|.+++..+. .+++.++.-|++||+-|+++||++ +|||||||-+||.++.+|-+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 99999999986 4568899987753 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCccccCCccccccccCChhhhccCCC-CcCCCeeehhhhHHHHHhCCCCCC
Q 001238 923 GLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKI-SEKSDVYSYGVVLLEIITGKKPVD 983 (1117)
Q Consensus 923 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~vl~ell~g~~P~~ 983 (1117)
|-|.....+ +...++||..|.|||++.+.+| +..-||||+|+++|.++....||.
T Consensus 715 gsaa~~ksg------pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSG------PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCC------CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999876542 4556899999999999998887 467899999999999999998884
No 407
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=9.7e-28 Score=267.77 Aligned_cols=253 Identities=25% Similarity=0.338 Sum_probs=205.8
Q ss_pred hccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 852 (1117)
...+|...+++|.|.||.|||++. .+++.+|+|+++-......+-+++|+-+++..+|||||.+++.+-..+..++.||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 345788999999999999999985 4689999999987766667788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCC
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
||.+|+|.+.-+-. +++++.+...+.+...+|++|||++ +-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 93 ycgggslQdiy~~T---gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita-- 164 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA-- 164 (829)
T ss_pred ecCCCcccceeeec---ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh--
Confidence 99999999987653 5699999999999999999999999 889999999999999999999999999987653
Q ss_pred CCccccCCccccccccCChhhh---ccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccc
Q 001238 933 GGSFSANPQFAGSYGYIAPEYA---NMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEV 1009 (1117)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1117)
....+..+.||+.|||||+. +.+.|..++|||+.|+...|+..-++|.... +..+...-.-+....+...
T Consensus 165 --ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl-----hpmr~l~LmTkS~~qpp~l 237 (829)
T KOG0576|consen 165 --TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL-----HPMRALFLMTKSGFQPPTL 237 (829)
T ss_pred --hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc-----chHHHHHHhhccCCCCCcc
Confidence 23455678999999999965 4577899999999999999999988885322 2222222222334444443
Q ss_pred cCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHH
Q 001238 1010 LDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVA 1050 (1117)
Q Consensus 1010 ~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~ 1050 (1117)
-|+. .+...+-++.+. |+..+|.+||++..++
T Consensus 238 kDk~---kws~~fh~fvK~------altknpKkRptaeklL 269 (829)
T KOG0576|consen 238 KDKT---KWSEFFHNFVKG------ALTKNPKKRPTAEKLL 269 (829)
T ss_pred cCCc---cchHHHHHHHHH------HhcCCCccCCChhhhe
Confidence 3332 333445555555 9999999999987764
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=2.9e-25 Score=235.33 Aligned_cols=210 Identities=35% Similarity=0.561 Sum_probs=179.1
Q ss_pred eeecCCeEEEEEEcCC-CcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCChhh
Q 001238 784 IGQGRSGIVYKVTLPS-GLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLGM 861 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 861 (1117)
||+|++|.||++.... ++.+++|++...... ..+.+.+|++.++.++|++|+++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999998654 899999999865432 34679999999999999999999999999899999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-CCcceeccccccccccCCCCCccccCC
Q 001238 862 LLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-RYESCLADFGLARLVEDDSGGSFSANP 940 (1117)
Q Consensus 862 ~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~ 940 (1117)
++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+........ ...
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~----~~~ 151 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS----LLK 151 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----hhh
Confidence 987642 2388999999999999999999999 9999999999999999 89999999999987654321 123
Q ss_pred ccccccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCc
Q 001238 941 QFAGSYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPD 1019 (1117)
Q Consensus 941 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1019 (1117)
...+...|++||..... .++.++|+|++|++++++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 34578899999998877 888999999999999999
Q ss_pred hhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 1020 TQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 1020 ~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
..+.+++.. |++.+|++||++.++++.
T Consensus 188 ~~~~~~l~~------~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRK------MLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHH------HhhCCcccCcCHHHHhhC
Confidence 133444444 999999999999998764
No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2.8e-25 Score=238.43 Aligned_cols=199 Identities=33% Similarity=0.447 Sum_probs=173.0
Q ss_pred CCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCcc-chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDKI-STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
|++.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667899999999999998654 889999999865444 56788999999999999999999999999899999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
+++|.+++..... .+++..+..++.+++.++.|||+. +++|+|++|.||+++.++.++++|||.+........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-- 153 (225)
T smart00221 81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-- 153 (225)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc--
Confidence 9999999876532 178899999999999999999999 999999999999999999999999999987754320
Q ss_pred cccCCccccccccCChhhh-ccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 936 FSANPQFAGSYGYIAPEYA-NMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 154 -~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 -ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122345678899999998 667788899999999999999999999953
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=4.4e-25 Score=227.81 Aligned_cols=264 Identities=19% Similarity=0.282 Sum_probs=206.0
Q ss_pred cCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEEEEe
Q 001238 776 RSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
-+|+++++||+|.||+.+.|+ .-+++.||||.-.... ..-++..|.+..+.|. .++|..++-|+.++.+-.+|||.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 379999999999999999997 5579999999865433 3457889999999995 69999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC-----Ccceeccccccccc
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER-----YESCLADFGLARLV 928 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-----~~~kl~DfGla~~~ 928 (1117)
+ |.+|.|++.-.. +.++..++..+|.|++.-++|+|++ .+|+|||||+|+||+.. ..+.++|||+|+.+
T Consensus 106 L-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred h-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 8 889999887543 4599999999999999999999999 99999999999999743 35679999999988
Q ss_pred cCCCCC---ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCC
Q 001238 929 EDDSGG---SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKD 1005 (1117)
Q Consensus 929 ~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1117)
.+.... .+.......||.+||+-..+.+++.+.+.|+-|+|-|+++.+-|..||++.-.+ ..-..+-+-..+++..
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-TNKEKYEKIGETKRST 258 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-chHHHHHHhccccccC
Confidence 765432 345556778999999999999999999999999999999999999999875332 1112222222233334
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
+.+.+...++ .+...-++. .-..+-++-|+++.+...+..+..
T Consensus 259 ~i~~Lc~g~P----~efa~Yl~y------vR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 259 PIEVLCEGFP----EEFATYLRY------VRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred CHHHHHhcCH----HHHHHHHHH------HHhcCcccCCCHHHHHHHHHHHHH
Confidence 4444443332 222222322 234578889999998888876654
No 411
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=1.9e-27 Score=250.58 Aligned_cols=386 Identities=23% Similarity=0.256 Sum_probs=240.8
Q ss_pred CCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCC-CcCCCCCccccCCCCCcceEec
Q 001238 268 ELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISM-NSLTGSIPQTLGNLTSLQELQL 346 (1117)
Q Consensus 268 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~-N~l~~~~p~~l~~l~~L~~L~L 346 (1117)
.-.+++|..|+|+...|..|+.+++|+.|+|++|+|+.+-|.+|.++.+|..|-+-+ |+|+......|++|.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 446788888888866667788888888888888888888888888888876665544 8888655567888888888888
Q ss_pred ccccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhcccccc------------ccCCCCCCcccccc
Q 001238 347 SVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLE------------GEIPPSISNCQNLE 414 (1117)
Q Consensus 347 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------------~~~~~~~~~l~~L~ 414 (1117)
.-|++.-.....|..+++|..|.+..|.+..+--..|..+..++.+.+..|.+- ...|..++......
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 888888777788888888888888888888444447888888888888888732 22233344444444
Q ss_pred eeecccccccCCCcccccC-CCCCCe-eeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccC
Q 001238 415 AVDLSQNGLTGPIPRGIFQ-LKKLNK-LLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGS 492 (1117)
Q Consensus 415 ~L~Ls~N~l~~~~p~~~~~-l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 492 (1117)
-..+.++++..+.+.-|.. +..+.. +....+...-.....|..+++|+.|+|++|+|+++.+.+|.++..+++|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 4445555554332322221 111111 11112222212223466666666666666666666666666666666666666
Q ss_pred CcCCCCCCcccccCCCCceEEccCCccccccchhhhcccccccccccCCcCCC----------------CCCCCcCCCcc
Q 001238 493 NRLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGG----------------MLSPDLGSLSS 556 (1117)
Q Consensus 493 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~----------------~~~~~~~~l~~ 556 (1117)
|+|..+....|.++.+|+.|+|.+|+|+...|.+|..+.+|..|+|-.|.+.- +...--.+-..
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~ 387 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGF 387 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCch
Confidence 66665555566666666666666666666666666666666666666554420 00001111123
Q ss_pred ccEEeccccccCCC---CCccc---------ccccceeEE-eccccccccccccccCCchhHHHhhcCCCCcccCCcccc
Q 001238 557 LTKLVLNKNRFAGS---IPSQL---------GSCVKLQLL-DLSSNQLSGNIPASLGKIPALAIALNLSWNQICGELPAE 623 (1117)
Q Consensus 557 L~~L~L~~N~l~~~---~~~~~---------~~l~~L~~L-~Ls~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~ 623 (1117)
++.+.++++.+... .|+.. ..++-+.+. .-|++.++ .+|..+ |.=..+|.|.+|+++ .+|.+
T Consensus 388 ~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~i---P~d~telyl~gn~~~-~vp~~ 462 (498)
T KOG4237|consen 388 VRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGI---PVDVTELYLDGNAIT-SVPDE 462 (498)
T ss_pred hccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCC---CchhHHHhcccchhc-ccCHH
Confidence 44555555544311 11111 122333333 23444443 555543 333368999999998 66766
Q ss_pred ccCCCCccEEeccCccccCCcch-hhhcccceEEEeecc
Q 001238 624 LTGLNKLGILDLSHNELSGDLHF-LAELQNLVVLNVSHN 661 (1117)
Q Consensus 624 l~~l~~L~~LdLs~N~l~~~~~~-l~~l~~L~~L~ls~N 661 (1117)
.+.+| .+|||+|+|+..-.. |.+++.|.+|-||+|
T Consensus 463 --~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 463 --LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred --HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 67778 899999999875544 888999999999987
No 412
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=4.5e-25 Score=236.62 Aligned_cols=208 Identities=27% Similarity=0.353 Sum_probs=171.6
Q ss_pred hHHHhccCCCCCCeeeecCCeEEEEEEcC----CCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEeeeecC
Q 001238 770 SIGDATRSLTAGNIIGQGRSGIVYKVTLP----SGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLGWGANR 844 (1117)
Q Consensus 770 ~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 844 (1117)
.+....+.|..+++||+|.|++||++... .++.||+|.+.... ...++.+|++++..+ .+.||+++.+++...
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34556678999999999999999998632 46789999987654 356799999999999 599999999999999
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-CCcceecccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-RYESCLADFG 923 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfG 923 (1117)
+...+|+||+++....++... ++...+..+++.+..||+++|.+ |||||||||+|++.+. .++-.|.|||
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred CeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEech
Confidence 999999999999998888765 66788999999999999999999 9999999999999985 4677899999
Q ss_pred ccccccCCC-----------------CC-----------------------ccccCCccccccccCChhhhc-cCCCCcC
Q 001238 924 LARLVEDDS-----------------GG-----------------------SFSANPQFAGSYGYIAPEYAN-MTKISEK 962 (1117)
Q Consensus 924 la~~~~~~~-----------------~~-----------------------~~~~~~~~~gt~~y~aPE~~~-~~~~~~~ 962 (1117)
+|....... +. ........+||+||.|||++. ....+++
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 997221100 00 000112357999999999875 4677899
Q ss_pred CCeeehhhhHHHHHhCCCCCCCCCCC
Q 001238 963 SDVYSYGVVLLEIITGKKPVDASFPD 988 (1117)
Q Consensus 963 ~Dv~SlG~vl~ell~g~~P~~~~~~~ 988 (1117)
+||||.||++.-+++++.||-....+
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd 284 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDD 284 (418)
T ss_pred cceeeccceeehhhccccccccCccc
Confidence 99999999999999999999654444
No 413
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.92 E-value=2.1e-25 Score=229.96 Aligned_cols=195 Identities=26% Similarity=0.348 Sum_probs=164.6
Q ss_pred ccCCCCCCeeeecCCeEEEEE-EcCCCcEEEEEEeecC--CccchHHHHHHHHHHhccCCCCcceEEeeeecCC------
Q 001238 775 TRSLTAGNIIGQGRSGIVYKV-TLPSGLTVAVKRFRAS--DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRK------ 845 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~-~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 845 (1117)
..+|.-.+.+|.|.- .|..+ +.-.++.||+|+.... .....++..+|...+..+.|+||++++.++.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 346777788899988 55544 3446899999987543 3445677889999999999999999999886543
Q ss_pred ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
..|+||||| ..+|...+... ++-++...+..|++.|+.|+|+. +|+|||+||+||++..+..+||.|||+|
T Consensus 95 e~y~v~e~m-~~nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVILME-----LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhh-hhHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 469999999 56888887732 77889999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
+..... -..+..+.|..|.|||++-+..|.+.+||||.||++.||++|+.-|.+
T Consensus 166 r~e~~~-----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 166 RTEDTD-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred cccCcc-----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 865432 245677899999999999888899999999999999999999988864
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=3.7e-25 Score=218.53 Aligned_cols=264 Identities=22% Similarity=0.277 Sum_probs=207.6
Q ss_pred ccCCCCCCeeeecCCeEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccCC-CCcceEEeeeecCCceEEEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRH-RNIVRLLGWGANRKTKLLFYD 852 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv~e 852 (1117)
...|.++++||.|+||.+|.|. ..+|+.||||+-+.... ..++..|.++...++| ..|+.+..|+.+.+...+|||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 4578999999999999999996 56899999999876543 3467889999999976 788888999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC---Ccceecccccccccc
Q 001238 853 YMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER---YESCLADFGLARLVE 929 (1117)
Q Consensus 853 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~DfGla~~~~ 929 (1117)
.+ |.+|.+++.-.. ..++..+++-+|-|++.-++|+|.+ ++|||||||+|+|.+-+ ..+.++|||+|+.+.
T Consensus 92 LL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred cc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 98 889999887543 3488999999999999999999999 99999999999999754 456799999999876
Q ss_pred CCCCC---ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHH-HhcCCC
Q 001238 930 DDSGG---SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDH-LKSKKD 1005 (1117)
Q Consensus 930 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~-~~~~~~ 1005 (1117)
+.... .+.......||.+|.+-...-+.+.+.+.|+-|+|.++.+...|..||++..+. .-.+..+++ .++...
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~--tk~QKyEkI~EkK~s~ 243 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA--TKKQKYEKISEKKMST 243 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh--hHHHHHHHHHHhhcCC
Confidence 54332 344556778999999999888888999999999999999999999999875332 111122222 223334
Q ss_pred CccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1006 PVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1006 ~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
+.+++.+.++. +..-.+.. |-...-++-|++..+.+.++-+..
T Consensus 244 ~ie~LC~G~P~----EF~myl~Y------~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 244 PIEVLCKGFPA----EFAMYLNY------CRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred CHHHHhCCCcH----HHHHHHHH------HhhcCCCCCCcHHHHHHHHHHHHh
Confidence 55555444433 33333444 888889999999999888776644
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=2.4e-26 Score=242.40 Aligned_cols=421 Identities=22% Similarity=0.222 Sum_probs=192.2
Q ss_pred EEEEecccccccCcCCccccccccCCeEeccCCCCCCCchhhhcccccCcEeeccC-CCcCCCCchhhhhhhhhhhhhcc
Q 001238 76 VVGLDLRYVDLLGHVPTNFTSLLSLNRLVLSGTNLTGSIPKEIASLNQLNYLDLSE-NSLTGEIPRELCSLLRLEQLRLN 154 (1117)
Q Consensus 76 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~ 154 (1117)
.|.++|..+.+...-|..|+.+..|++||||+|+|+..-|++|..|..|..|-+-+ |+|+...-+.|+.|..|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 34555555555443334455555555555555555555555555555554444433 55552222345555555555555
Q ss_pred CCCcCCCCchhccCCcCCcEEeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCcccccccccccccccccccccc
Q 001238 155 SNQLEGAIPIQIGNLSSLTQLFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGF 234 (1117)
Q Consensus 155 ~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~ 234 (1117)
-|++.......|..|++|..|.+++|.+...--.+|..+..++.+++..|... ..++++.+... ...
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i------cdCnL~wla~~-------~a~ 215 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI------CDCNLPWLADD-------LAM 215 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc------cccccchhhhH-------Hhh
Confidence 55555555555555555555555555555322225555555555555555421 12222222211 111
Q ss_pred CCcccccccccceeecccccccccCCcCCCCC-CCCcEEecCCCccCCcCC-ccCCCCCCCcEEEccCCcCcccCCcCCC
Q 001238 235 LPPTLGLLKRLQTIAIYTALLSGQIPPELGDC-TELQYIYLYENALTGSIP-SKLGNLKNLVNLFLWQNNLVGIIPPELG 312 (1117)
Q Consensus 235 lp~~l~~l~~L~~L~l~~~~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 312 (1117)
.|..++..+-..-..++..++...-+..|... .++..=..+.+...+.-| ..|..|++|++|+|++|+|+++-+.+|.
T Consensus 216 ~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe 295 (498)
T KOG4237|consen 216 NPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFE 295 (498)
T ss_pred chhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhc
Confidence 23333333333333444433332222222111 112111222222222333 2355555555555555555555555555
Q ss_pred CCCCCCEEEcCCCcCCCCCccccCCCCCcceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHH
Q 001238 313 NCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLL 392 (1117)
Q Consensus 313 ~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 392 (1117)
.+..++.|.|..|+|...-...|.++..|+.|+|.+|+|+...|..|..+.+|.+|+|-.|.+.-. ..|..|
T Consensus 296 ~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn--------C~l~wl 367 (498)
T KOG4237|consen 296 GAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN--------CRLAWL 367 (498)
T ss_pred chhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCc--------cchHHH
Confidence 555555555555555544444455555555555555555555555555555555555544443200 011111
Q ss_pred --HhccccccccCCCCCCcccccceeecccccccCC---CcccccCCCCCCeeeccCccCCCCCCCCccccccccee-cc
Q 001238 393 --FVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGP---IPRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRF-RA 466 (1117)
Q Consensus 393 --~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L-~l 466 (1117)
.|..+.-.|..| -..-..++.++++.+.+... .|+... +.-++. .-..++-+.+. ..
T Consensus 368 ~~Wlr~~~~~~~~~--Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~------------~~~s~~---cP~~c~c~~tVvRc 430 (498)
T KOG4237|consen 368 GEWLRKKSVVGNPR--CQSPGFVRQIPISDVAFGDFRCGGPEELG------------CLTSSP---CPPPCTCLDTVVRC 430 (498)
T ss_pred HHHHhhCCCCCCCC--CCCCchhccccchhccccccccCCccccC------------CCCCCC---CCCCcchhhhhHhh
Confidence 122222111111 11122345555555544310 111100 000000 11122333332 23
Q ss_pred CCCcccccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCCceEEccCCccccccchhhhcccccccccccCC
Q 001238 467 NSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDN 541 (1117)
Q Consensus 467 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 541 (1117)
+++.++ .+|..+- ....+|++.+|.++ .+|.. .+.+| .+|+++|+|...-...|.++.+|.+|-+++|
T Consensus 431 Snk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 431 SNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred cccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 333333 3443322 34566777777777 55555 45566 7777777777655566777777777777665
No 416
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=3.3e-25 Score=240.32 Aligned_cols=199 Identities=23% Similarity=0.230 Sum_probs=169.1
Q ss_pred cCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCccchHHHHHHHHHHhccC------CCCcceEEeeeecCCceE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDKISTGAFSSEIATLSRIR------HRNIVRLLGWGANRKTKL 848 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~~~~~~~~~~ 848 (1117)
.+|.+....|+|-|++|.+|.. ..|..||||+++.... ..+.=..|+++|++|. --|+++++..|....++|
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 5788888899999999999974 4588999999986543 2344567999999995 248999999999999999
Q ss_pred EEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC-Ccceecccccccc
Q 001238 849 LFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER-YESCLADFGLARL 927 (1117)
Q Consensus 849 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfGla~~ 927 (1117)
+|+|-+ .-+|.++++.....-.+....+..+++|+.-||..|-.. +|+|.||||.||||.+. ..+||||||.|..
T Consensus 511 lVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 511 LVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred EEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccccc
Confidence 999987 568999998754444488899999999999999999987 99999999999999975 4679999999987
Q ss_pred ccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 928 VEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
..... .+....+.-|.|||++.+.+|+...|+||.||++||+.||+.-|.+.
T Consensus 587 ~~ene------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 587 ASENE------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ccccc------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 76532 23445677899999999999999999999999999999999988763
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=3.9e-24 Score=278.83 Aligned_cols=337 Identities=20% Similarity=0.230 Sum_probs=198.9
Q ss_pred cccccccCCeEeccCCC------CCCCchhhhcccc-cCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchh
Q 001238 93 NFTSLLSLNRLVLSGTN------LTGSIPKEIASLN-QLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQ 165 (1117)
Q Consensus 93 ~~~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 165 (1117)
.|.++.+|+.|.+..+. +...+|..+..++ +|++|++.+|.++ .+|..+ ...+|+.|+|++|+++ .+|..
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~ 629 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDG 629 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccc
Confidence 46667777777665442 2334555555553 4677777776665 566655 3566677777777666 56666
Q ss_pred ccCCcCCcEEeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCccccccccc
Q 001238 166 IGNLSSLTQLFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRL 245 (1117)
Q Consensus 166 ~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L 245 (1117)
+..+++|+.|+|++|.....+|. ++.+++|+.|++++|..+ ..+|..++++++|+.|++++|.....+|.
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L-~~lp~si~~L~~L~~L~L~~c~~L~~Lp~-------- 699 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSL-VELPSSIQYLNKLEDLDMSRCENLEILPT-------- 699 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCc-cccchhhhccCCCCEEeCCCCCCcCccCC--------
Confidence 66667777777766554444553 556666666666665433 34555555555555555555443333443
Q ss_pred ceeecccccccccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCC
Q 001238 246 QTIAIYTALLSGQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMN 325 (1117)
Q Consensus 246 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N 325 (1117)
.+ ++++|++|+|++|...+.+|.. ..+|++|+|++|.+. .+|..+ .+++|+.|++.++
T Consensus 700 ----------------~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~ 757 (1153)
T PLN03210 700 ----------------GI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEM 757 (1153)
T ss_pred ----------------cC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-ccccccccccccc
Confidence 33 3445555555544333333321 234455555555544 233332 3445555555442
Q ss_pred cC-------CCCCccccCCCCCcceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhcccc
Q 001238 326 SL-------TGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNR 398 (1117)
Q Consensus 326 ~l-------~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 398 (1117)
.. ....+..+...++|+.|+|++|...+.+|..++++++|+.|++++|...+.+|..+ ++++|+.|++++|.
T Consensus 758 ~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 758 KSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCS 836 (1153)
T ss_pred chhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCC
Confidence 21 11111122233567777777776666667777777777777777665444556544 56777777777765
Q ss_pred ccccCCCCCCcccccceeecccccccCCCcccccCCCCCCeeeccCc-cCCCCCCCCcccccccceeccCCCc
Q 001238 399 LEGEIPPSISNCQNLEAVDLSQNGLTGPIPRGIFQLKKLNKLLLLSN-NLSGVIPPEMGNCSSLIRFRANSNK 470 (1117)
Q Consensus 399 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~N~ 470 (1117)
....+|.. .++|+.|+|++|.++ .+|.++..+++|+.|+|++| ++. .+|..+..++.|+.+++++|.
T Consensus 837 ~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 837 RLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 44344432 357888889999888 58888888899999999884 455 467777888888888887763
No 418
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.5e-23 Score=233.91 Aligned_cols=265 Identities=24% Similarity=0.326 Sum_probs=200.3
Q ss_pred CCCCCCeeeecCCeEEEEEEcCCC--cEEEEEEeecCCccchHHHHHHHHHHhccCC----CCcceEEeee-ecCCceEE
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPSG--LTVAVKRFRASDKISTGAFSSEIATLSRIRH----RNIVRLLGWG-ANRKTKLL 849 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~-~~~~~~~l 849 (1117)
+|++.+.||+|+||.||.|..... ..+|+|............+..|+.++..+.+ +++.++++.+ ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999986543 5899998876533333378889999999873 6999999999 57788899
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC-----Ccceeccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER-----YESCLADFGL 924 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-----~~~kl~DfGl 924 (1117)
||+.+ |.+|.++..... .+.++..++.+++.|++.+|+++|+. |++||||||+|+.++.. ..+.+.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 889999886654 45699999999999999999999999 99999999999999865 3588999999
Q ss_pred cc--cccCCCCCc---ccc-CCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHH
Q 001238 925 AR--LVEDDSGGS---FSA-NPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRD 998 (1117)
Q Consensus 925 a~--~~~~~~~~~---~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~ 998 (1117)
++ .+....+.. ... ...+.||.+|++++++.+.+.+++.|+||++.++.|+..|..||....... . ...+..
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~-~-~~~~~~ 251 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD-L-KSKFEK 251 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc-h-HHHHHH
Confidence 98 433332221 111 234669999999999999999999999999999999999999996532211 1 111111
Q ss_pred HHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 001238 999 HLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQEP 1060 (1117)
Q Consensus 999 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~~~ 1060 (1117)
....... .. .....+.....+... +-..+..++|.+..+...++......
T Consensus 252 ~~~~~~~-----~~-~~~~~~~~~~~~~~~------~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 252 DPRKLLT-----DR-FGDLKPEEFAKILEY------IDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred Hhhhhcc-----cc-ccCCChHHHHHHHHH------hhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111100 00 222333344444444 45578999999999999988776554
No 419
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.4e-23 Score=273.62 Aligned_cols=316 Identities=22% Similarity=0.258 Sum_probs=236.2
Q ss_pred CchhccCCc-CCcEEeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccc
Q 001238 162 IPIQIGNLS-SLTQLFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLG 240 (1117)
Q Consensus 162 ~p~~~~~L~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~ 240 (1117)
+|..|..++ +|+.|++.+|.+. .+|..| ...+|+.|++.+|+. ..+|..+..+++|+.|+++++.....+| .+.
T Consensus 580 lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l--~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls 654 (1153)
T PLN03210 580 LPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKL--EKLWDGVHSLTGLRNIDLRGSKNLKEIP-DLS 654 (1153)
T ss_pred cCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccc--cccccccccCCCCCEEECCCCCCcCcCC-ccc
Confidence 444444432 3555555555554 344444 345555555555542 2355555566666666666655444455 367
Q ss_pred cccccceeecccccccccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEE
Q 001238 241 LLKRLQTIAIYTALLSGQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSII 320 (1117)
Q Consensus 241 ~l~~L~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 320 (1117)
.+++|++|++.+|.....+|..+.++++|++|++++|...+.+|..+ ++++|+.|++++|...+.+|.. ..+|+.|
T Consensus 655 ~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L 730 (1153)
T PLN03210 655 MATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWL 730 (1153)
T ss_pred cCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCee
Confidence 78888888888888778889999999999999999976555788766 7999999999999776666643 4689999
Q ss_pred EcCCCcCCCCCccccCCCCCcceEeccccccc-------CcccccccCCCCCcEEEecCccccCCCCcccccccchHHHH
Q 001238 321 DISMNSLTGSIPQTLGNLTSLQELQLSVNQIS-------GEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLF 393 (1117)
Q Consensus 321 dLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 393 (1117)
+|++|.+. .+|..+ .+++|++|++.++... ...+..+...++|+.|++++|...+.+|..++++++|+.|+
T Consensus 731 ~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~ 808 (1153)
T PLN03210 731 DLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLE 808 (1153)
T ss_pred ecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEE
Confidence 99999998 577655 5789999999875432 12222334457899999999988888999999999999999
Q ss_pred hccccccccCCCCCCcccccceeecccccccCCCcccccCCCCCCeeeccCccCCCCCCCCcccccccceeccCC-Cccc
Q 001238 394 VWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANS-NKLT 472 (1117)
Q Consensus 394 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~ 472 (1117)
+++|...+.+|..+ ++++|+.|+|++|.....+|.. ..+|+.|+|++|.|+ .+|..+..+++|+.|++++ |+++
T Consensus 809 Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~ 883 (1153)
T PLN03210 809 IENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ 883 (1153)
T ss_pred CCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC
Confidence 99986555777766 7899999999998755455543 368999999999998 5788999999999999998 4555
Q ss_pred ccCCCCcCCCCCCCEEEccCCc
Q 001238 473 GFIPPEIGNLKNLNFLDLGSNR 494 (1117)
Q Consensus 473 ~~~~~~~~~l~~L~~L~Ls~N~ 494 (1117)
.+|..+..+++|+.|++++|.
T Consensus 884 -~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 884 -RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred -ccCcccccccCCCeeecCCCc
Confidence 577788999999999999874
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=8.2e-24 Score=268.14 Aligned_cols=198 Identities=17% Similarity=0.174 Sum_probs=137.6
Q ss_pred ccCC-CCcceEEeee-------ecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCce
Q 001238 828 RIRH-RNIVRLLGWG-------ANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAI 899 (1117)
Q Consensus 828 ~l~H-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 899 (1117)
.++| +||+++++++ ...+..+.+|||+ +++|.+++.... ..+++.+++.++.||++||+|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 4456 6888888876 2334567788987 669999997542 3489999999999999999999999 99
Q ss_pred eeeccccCeEEEcC-------------------CCcceeccccccccccCCCCCc------------cccCCcccccccc
Q 001238 900 LHRDVKSHNILLGE-------------------RYESCLADFGLARLVEDDSGGS------------FSANPQFAGSYGY 948 (1117)
Q Consensus 900 vHrDlkp~Nill~~-------------------~~~~kl~DfGla~~~~~~~~~~------------~~~~~~~~gt~~y 948 (1117)
|||||||+|||++. ++.+|++|||+++......... ........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4556677777776432110000 0011124689999
Q ss_pred CChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHH
Q 001238 949 IAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQA 1028 (1117)
Q Consensus 949 ~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 1028 (1117)
||||++.+..|+.++|||||||++|||++|..|+... .. .+....... ..+..... ..+.
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~----~~---~~~~~~~~~------~~~~~~~~-------~~~~ 241 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK----SR---TMSSLRHRV------LPPQILLN-------WPKE 241 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH----HH---HHHHHHHhh------cChhhhhc-------CHHH
Confidence 9999999999999999999999999999998886421 11 111111100 01111111 1112
Q ss_pred HhHhhhccCCCCCCCCCHHHHHH
Q 001238 1029 LGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1029 ~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
..++..|++.+|.+||++.|+++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhh
Confidence 24455699999999999999975
No 421
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=7.9e-23 Score=229.02 Aligned_cols=177 Identities=19% Similarity=0.180 Sum_probs=135.0
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEcC--CCcEEEEEEeecC-----CccchHHHHHHHHHHhccCCCCcce-EEeeeecC
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTLP--SGLTVAVKRFRAS-----DKISTGAFSSEIATLSRIRHRNIVR-LLGWGANR 844 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~-l~~~~~~~ 844 (1117)
....+|.+.+.||+|+||+||+|.+. +++.||||++... .....+.|.+|++++++++|+|+++ ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 34567999999999999999999754 5778899987532 1222456899999999999999985 5442
Q ss_pred CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeecc-ccCeEEEcCCCcceecccc
Q 001238 845 KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDV-KSHNILLGERYESCLADFG 923 (1117)
Q Consensus 845 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDl-kp~Nill~~~~~~kl~DfG 923 (1117)
+..|+||||++|++|... .. .. ...++.|+++||+|||++ +|+|||| ||+||+++.++.+||+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999632 11 11 146788999999999999 9999999 9999999999999999999
Q ss_pred ccccccCCCCCcc----ccCCccccccccCChhhhccCC------CCcCCCee
Q 001238 924 LARLVEDDSGGSF----SANPQFAGSYGYIAPEYANMTK------ISEKSDVY 966 (1117)
Q Consensus 924 la~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~ 966 (1117)
+|+.+........ ..-....+++.|+|||.+...+ .+..+|-|
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9997765432111 1124667889999999886432 23446666
No 422
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.87 E-value=3.2e-22 Score=206.01 Aligned_cols=171 Identities=21% Similarity=0.194 Sum_probs=124.5
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|+|.++++... ..+++.+++.++.|+++||+|||++ + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~----- 62 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE----- 62 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc-----
Confidence 68889887542 3489999999999999999999998 5 999999999999999 9999876432
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQG 1016 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1016 (1117)
...||+.|||||++.+..++.++|||||||++|||++|+.||............... ..... ++.-.
T Consensus 63 ----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~----~~~~~----~~~~~- 129 (176)
T smart00750 63 ----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN----GMPAD----DPRDR- 129 (176)
T ss_pred ----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH----HhccC----Ccccc-
Confidence 125889999999999999999999999999999999999999653222222222211 11100 00000
Q ss_pred CCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001238 1017 HPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRQ 1058 (1117)
Q Consensus 1017 ~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~~ 1058 (1117)
.....+.......+++..|++.+|++||++.++++.+.....
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 001111111123445666999999999999999998876643
No 423
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=2.8e-22 Score=241.79 Aligned_cols=261 Identities=28% Similarity=0.360 Sum_probs=143.4
Q ss_pred CcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCCCcceEecccccccCcccccccCCCCCcEEEecC
Q 001238 293 LVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDN 372 (1117)
Q Consensus 293 L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 372 (1117)
-..|+|++|+++ .+|+.+. ++|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p---------- 261 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---P---------- 261 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---c----------
Confidence 445556666555 3444443 24555555555555 23321 244555555555554 22321 1
Q ss_pred ccccCCCCcccccccchHHHHhccccccccCCCCCCcccccceeecccccccCCCcccccCCCCCCeeeccCccCCCCCC
Q 001238 373 NQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIP 452 (1117)
Q Consensus 373 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 452 (1117)
++|+.|++++|.++ .+|.. .++|+.|+|++|+++ .+|.. +++|+.|+|++|+|+++ |
T Consensus 262 --------------~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~L-p 318 (788)
T PRK15387 262 --------------PGLLELSIFSNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASL-P 318 (788)
T ss_pred --------------cccceeeccCCchh-hhhhc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCccccC-C
Confidence 23444444444444 22221 134555666666665 24432 24566666666666542 2
Q ss_pred CCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCCceEEccCCccccccchhhhcccc
Q 001238 453 PEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVR 532 (1117)
Q Consensus 453 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 532 (1117)
.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|+|+. +|..
T Consensus 319 ~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l------ 380 (788)
T PRK15387 319 AL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL------ 380 (788)
T ss_pred CC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc------
Confidence 21 1235555566666553 2321 1356666666666663 3332 2345555555555553 2211
Q ss_pred cccccccCCcCCCCCCCCcCCCccccEEeccccccCCCCCcccccccceeEEeccccccccccccccCCchhHHHhhcCC
Q 001238 533 LQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDLSSNQLSGNIPASLGKIPALAIALNLS 612 (1117)
Q Consensus 533 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~l~~~L~Ls 612 (1117)
..+|+.|+|++|+|++ +|.. ..+|+.|++++|+|+ .+|... ..+ ..|+|+
T Consensus 381 ---------------------~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L-~~L~Ls 430 (788)
T PRK15387 381 ---------------------PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPMLP---SGL-LSLSVY 430 (788)
T ss_pred ---------------------ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcch---hhh-hhhhhc
Confidence 1345666666666663 3332 246788888888887 466543 233 678899
Q ss_pred CCcccCCccccccCCCCccEEeccCccccCCcch
Q 001238 613 WNQICGELPAELTGLNKLGILDLSHNELSGDLHF 646 (1117)
Q Consensus 613 ~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~ 646 (1117)
+|+|+ .+|..+.++++|+.|||++|+|++..+.
T Consensus 431 ~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 431 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred cCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 99998 6888899999999999999999986554
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=6.4e-23 Score=205.54 Aligned_cols=251 Identities=19% Similarity=0.327 Sum_probs=190.0
Q ss_pred CCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCc--cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecC
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDK--ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMP 855 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 855 (1117)
.....+|.+...|+.|+|+| .|..+++|++...+. .....|..|.-.++.+.||||..+++.|..+.+..++..||+
T Consensus 192 lnl~tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 34456788999999999999 456677787754322 223468999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCc
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGS 935 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 935 (1117)
.|+|..++++... -..+..++.+++.+||+|++|||+. .|-|.---+.+..|++|++.+++|. .+-+++....
T Consensus 271 ~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris-mad~kfsfqe---- 343 (448)
T KOG0195|consen 271 FGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQE---- 343 (448)
T ss_pred chHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee-cccceeeeec----
Confidence 9999999998643 3377889999999999999999997 3344455789999999999988864 2222222111
Q ss_pred cccCCccccccccCChhhhccCCCC---cCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCc
Q 001238 936 FSANPQFAGSYGYIAPEYANMTKIS---EKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDP 1012 (1117)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~---~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1117)
....-.|.||+||.++.++.+ .++|+|||++++||+.|+..||.+..+.+-. .+-..+-+..
T Consensus 344 ----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg-----------mkialeglrv 408 (448)
T KOG0195|consen 344 ----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG-----------MKIALEGLRV 408 (448)
T ss_pred ----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh-----------hhhhhccccc
Confidence 112346789999999876554 5799999999999999999999764332111 1112233445
Q ss_pred ccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 1013 KLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 1013 ~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
.++.........++.. |+..||.+||.++.|+-.||+++
T Consensus 409 ~ippgis~hm~klm~i------cmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 HIPPGISRHMNKLMNI------CMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cCCCCccHHHHHHHHH------HhcCCCCcCCCcceehhhHHHhc
Confidence 5555555555555555 99999999999999999998764
No 425
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=1e-21 Score=236.87 Aligned_cols=264 Identities=28% Similarity=0.341 Sum_probs=157.5
Q ss_pred CCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCCCcceEecc
Q 001238 268 ELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLS 347 (1117)
Q Consensus 268 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls 347 (1117)
.-..|+|++|.++ .+|..+. ++|+.|++.+|+++. +|.. .++|++|+|++|+|+ .+|.. .++|+.|+|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 3556788888777 5776665 367888888888773 4532 467888888888888 44542 3577888888
Q ss_pred cccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCCcccccceeecccccccCCC
Q 001238 348 VNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPI 427 (1117)
Q Consensus 348 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 427 (1117)
+|.++ .+|..+ .+|+.|++++|+++ .+|.. +++|+.|++++|++++ +|.. ..+|+.|++++|+|++ +
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-c
Confidence 88877 444432 45777778888777 34432 3556777777777664 3332 1345666677777663 4
Q ss_pred cccccCCCCCCeeeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCC
Q 001238 428 PRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCR 507 (1117)
Q Consensus 428 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 507 (1117)
|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|.. .+
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred ccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---cc
Confidence 431 1356666666666664 2322 1345555555565553 3322 2345555555555552 3322 13
Q ss_pred CCceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCCCccccEEeccccccCCCCCcccccccceeEEecc
Q 001238 508 NLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDLS 587 (1117)
Q Consensus 508 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 587 (1117)
+|+.|++++|+|+ +++.. ..+|+.|++++|+|+ .+|..+..+..|+.|+|+
T Consensus 403 ~L~~LdLS~N~Ls------------------------sIP~l----~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 403 ELKELMVSGNRLT------------------------SLPML----PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred CCCEEEccCCcCC------------------------CCCcc----hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 4455555555544 33211 124556666777766 466677777788888888
Q ss_pred cccccccccccc
Q 001238 588 SNQLSGNIPASL 599 (1117)
Q Consensus 588 ~N~l~~~~p~~l 599 (1117)
+|+|++.+|..+
T Consensus 454 ~N~Ls~~~~~~L 465 (788)
T PRK15387 454 GNPLSERTLQAL 465 (788)
T ss_pred CCCCCchHHHHH
Confidence 888887766655
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=3.3e-21 Score=234.45 Aligned_cols=247 Identities=26% Similarity=0.471 Sum_probs=147.9
Q ss_pred ccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCcEEeccCCCCCCCCcccccCcccchhhhc
Q 001238 122 NQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQLFLYDNQLTDAIPATIGKLKNLEAIRA 201 (1117)
Q Consensus 122 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 201 (1117)
.+.+.|++++++++ .+|..+. .+|+.|+|++|.++ .+|..+. ++|++|++++|+|+ .+|..+. .+|+.|++
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 45677888888887 5776554 46788888888888 5666554 47888888888887 4565443 24555555
Q ss_pred cCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeecccccccccCCcCCCCCCCCcEEecCCCccCC
Q 001238 202 GGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTALLSGQIPPELGDCTELQYIYLYENALTG 281 (1117)
Q Consensus 202 ~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 281 (1117)
++|+.. .+|..+. ++|+.|++++|.+. .+|+.+. ++|++|+|++|+++
T Consensus 249 s~N~L~--~LP~~l~--------------------------s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt- 296 (754)
T PRK15370 249 SINRIT--ELPERLP--------------------------SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR- 296 (754)
T ss_pred cCCccC--cCChhHh--------------------------CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-
Confidence 555421 2332221 23444444444444 2444432 36777777777777
Q ss_pred cCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCCCcceEecccccccCcccccccC
Q 001238 282 SIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGN 361 (1117)
Q Consensus 282 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 361 (1117)
.+|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+.
T Consensus 297 ~LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp- 366 (754)
T PRK15370 297 TLPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP- 366 (754)
T ss_pred cCcccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc-
Confidence 3554433 367777777777773 444332 567777777777774 555543 57777777777776 4555442
Q ss_pred CCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCC----cccccceeeccccccc
Q 001238 362 CQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSIS----NCQNLEAVDLSQNGLT 424 (1117)
Q Consensus 362 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~~L~Ls~N~l~ 424 (1117)
++|+.|++++|+|+ .+|..+. ..|+.|++++|+++ .+|..+. .++.+..|++.+|.++
T Consensus 367 -~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 367 -PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 56777777777777 3454443 35777777777766 3343322 2244445555555544
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=6.4e-21 Score=232.00 Aligned_cols=159 Identities=28% Similarity=0.463 Sum_probs=76.0
Q ss_pred cceeecccccccccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCC
Q 001238 245 LQTIAIYTALLSGQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISM 324 (1117)
Q Consensus 245 L~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~ 324 (1117)
...|+++++.+.. +|..+. ++|+.|+|++|+|+ .+|..+. ++|++|++++|+++ .+|..+. ++|+.|+|++
T Consensus 180 ~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 180 KTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred ceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 3445555555442 343332 34556666666665 3444333 35566666666555 3343332 3455566666
Q ss_pred CcCCCCCccccCCCCCcceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCC
Q 001238 325 NSLTGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIP 404 (1117)
Q Consensus 325 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 404 (1117)
|++. .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|++++|++++ +|..+. ++|+.|++++|+++. +|
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP 320 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LP 320 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CC
Confidence 6555 3444432 35555555555555 3444332 345555555555552 333221 245555555555542 23
Q ss_pred CCCCcccccceeeccccccc
Q 001238 405 PSISNCQNLEAVDLSQNGLT 424 (1117)
Q Consensus 405 ~~~~~l~~L~~L~Ls~N~l~ 424 (1117)
..+. ++|+.|++++|.++
T Consensus 321 ~~l~--~sL~~L~Ls~N~Lt 338 (754)
T PRK15370 321 ETLP--PGLKTLEAGENALT 338 (754)
T ss_pred cccc--ccceeccccCCccc
Confidence 2221 34444444444444
No 428
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=1.9e-19 Score=205.58 Aligned_cols=202 Identities=32% Similarity=0.441 Sum_probs=170.2
Q ss_pred CCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCcc---chHHHHHHHHHHhccCCC-CcceEEeeeecCCceEEEEEe
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKI---STGAFSSEIATLSRIRHR-NIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~e~ 853 (1117)
|.+.+.||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 567788999999999999875 78999998765332 356799999999999988 799999999777778999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC-cceeccccccccccCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY-ESCLADFGLARLVEDDS 932 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfGla~~~~~~~ 932 (1117)
+.++++.+++........+.......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997776542112488899999999999999999999 999999999999999988 79999999998654432
Q ss_pred CCcc--ccCCccccccccCChhhhcc---CCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 933 GGSF--SANPQFAGSYGYIAPEYANM---TKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 933 ~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.... .......||..|+|||.... ..+....|+||+|++++++++|..||..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~ 213 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEG 213 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 2111 13456789999999999987 5788999999999999999999999764
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=1.1e-20 Score=196.46 Aligned_cols=171 Identities=12% Similarity=0.138 Sum_probs=135.1
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHH---------HHHHHHHHhccCCCCcceEEeeeecC
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGA---------FSSEIATLSRIRHRNIVRLLGWGANR 844 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~H~niv~l~~~~~~~ 844 (1117)
..++|+..+++|.|+||.||.+.. ++..+|||+++......... +++|++.+.++.||+|+.+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357899999999999999999766 57789999997653333322 68999999999999999999886543
Q ss_pred --------CceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc
Q 001238 845 --------KTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE 916 (1117)
Q Consensus 845 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~ 916 (1117)
+..++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||++++++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-
Confidence 35789999999999987732 232 2456999999999999 999999999999999988
Q ss_pred ceeccccccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHH
Q 001238 917 SCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEII 976 (1117)
Q Consensus 917 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell 976 (1117)
++++|||..+....... ...+.....|..++|+|+||+++....
T Consensus 173 i~liDfg~~~~~~e~~a----------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKA----------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhh----------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 99999998875532110 011444566778999999999987654
No 430
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=3.5e-20 Score=191.41 Aligned_cols=140 Identities=17% Similarity=0.176 Sum_probs=109.1
Q ss_pred CCeeeecCCeEEEEEEcCCCcEEEEEEeecCCcc--c-------hHH-----------------HHHHHHHHhccCCCCc
Q 001238 781 GNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKI--S-------TGA-----------------FSSEIATLSRIRHRNI 834 (1117)
Q Consensus 781 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~H~ni 834 (1117)
...||+|+||.||+|..++|+.||||+++..... . ..+ ...|++.++++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999888999999999754211 1 112 2349999999988877
Q ss_pred ceEEeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-hccCCCceeeeccccCeEEEcC
Q 001238 835 VRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYL-HHDCVPAILHRDVKSHNILLGE 913 (1117)
Q Consensus 835 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivHrDlkp~Nill~~ 913 (1117)
.....+.. ...++||||++++++....... +.+++.++.+++.|++.+|+|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 44333222 2238999999988775543221 3488999999999999999999 688 999999999999998
Q ss_pred CCcceecccccccccc
Q 001238 914 RYESCLADFGLARLVE 929 (1117)
Q Consensus 914 ~~~~kl~DfGla~~~~ 929 (1117)
++.++++|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999997653
No 431
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=2.1e-21 Score=232.13 Aligned_cols=255 Identities=21% Similarity=0.243 Sum_probs=185.4
Q ss_pred CCCCeeeecCCeEEEEEEc-CCCcEEEEEEeec---CCccc---hHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 779 TAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRA---SDKIS---TGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 779 ~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~---~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
...+++|.|++|.|+.+.. ......+.|.++. ..... ...+..|+.+-..+.|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4567899999998887653 2344445554431 11111 112556888888899999998888777776666669
Q ss_pred EecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 852 DYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 852 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
|||++ +|...+... +.+...++..++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+....-+
T Consensus 401 E~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 999988775 3478888999999999999999999 9999999999999999999999999999877654
Q ss_pred CCCccccCCccccccccCChhhhccCCCCc-CCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCcccc
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISE-KSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVL 1010 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1117)
...........+|+..|+|||.+...+|++ ..||||.|++++.|.+|+.||......++..........
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~---------- 543 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQ---------- 543 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccc----------
Confidence 444345666789999999999999999985 689999999999999999999765444332211000000
Q ss_pred CcccCCCCchhHHHHHHH-HhHhhhccCCCCCCCCCHHHHHH
Q 001238 1011 DPKLQGHPDTQIQEMLQA-LGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1011 ~~~l~~~~~~~~~~~l~~-~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
......+......+... -.++-.+++.+|.+|-++.+|++
T Consensus 544 -~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 544 -RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 01111111111111111 13444588999999999999987
No 432
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=3.6e-19 Score=184.86 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=111.6
Q ss_pred CCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccc--------------------------hHHHHHHHHHHhccCCCCc
Q 001238 781 GNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKIS--------------------------TGAFSSEIATLSRIRHRNI 834 (1117)
Q Consensus 781 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~H~ni 834 (1117)
...||+|+||.||+|...+|+.||||+++...... ...++.|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999997789999999987642110 1124678999999999987
Q ss_pred ceEEeeeecCCceEEEEEecCCCChhhh-hcCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCceeeeccccCeEEEc
Q 001238 835 VRLLGWGANRKTKLLFYDYMPNGTLGML-LHDGECAGLLEWDTRFKIALGVAEGLSYLHH-DCVPAILHRDVKSHNILLG 912 (1117)
Q Consensus 835 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivHrDlkp~Nill~ 912 (1117)
.....+... ..++||||++++++... +.. ..++..++.+++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 544443332 24899999998865433 332 237788899999999999999999 8 999999999999999
Q ss_pred CCCcceeccccccccccC
Q 001238 913 ERYESCLADFGLARLVED 930 (1117)
Q Consensus 913 ~~~~~kl~DfGla~~~~~ 930 (1117)
++.++|+|||+++....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 78999999999987643
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=3.2e-19 Score=180.85 Aligned_cols=188 Identities=15% Similarity=0.091 Sum_probs=141.4
Q ss_pred CCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccc----hHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEEEEe
Q 001238 779 TAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKIS----TGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 779 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
.+...|++|+||+||.+.. .+++++.+.+....... ...+.+|+++++++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999998776 67888888776543211 125889999999995 5889999986 346999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeecc-ccCeEEEcCCCcceeccccccccccCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDV-KSHNILLGERYESCLADFGLARLVEDDS 932 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDl-kp~Nill~~~~~~kl~DfGla~~~~~~~ 932 (1117)
++|.+|...... . ...++.|++++++++|++ ||+|||| ||+||+++.++.++|+|||+|.......
T Consensus 80 I~G~~L~~~~~~---------~-~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR---------G-DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh---------h-hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999998654321 1 134778999999999999 9999999 7999999999999999999998654322
Q ss_pred CC----ccc-----cCCccccccccCChhhhccC-CCC-cCCCeeehhhhHHHHHhCCCCCCC
Q 001238 933 GG----SFS-----ANPQFAGSYGYIAPEYANMT-KIS-EKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 933 ~~----~~~-----~~~~~~gt~~y~aPE~~~~~-~~~-~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
.. ... .......++.|++|+...-- ..+ .+.+.++-|..+|.++|++.|+-+
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 10 000 00112367889999855422 233 567888999999999999988743
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=1.7e-20 Score=176.15 Aligned_cols=164 Identities=33% Similarity=0.524 Sum_probs=106.1
Q ss_pred hcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCcEEeccCCCCCCCCcccccCcccch
Q 001238 118 IASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQLFLYDNQLTDAIPATIGKLKNLE 197 (1117)
Q Consensus 118 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 197 (1117)
+..+.+.+.|-||+|+++ .+|..+..|.+|+.|++++|+++ .+|.+++.|++|++|++.-|++. .+|..||.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445667777788888887 67777888888888888888888 78888888888888888888886 6788888888888
Q ss_pred hhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeecccccccccCCcCCCCCCCCcEEecCCC
Q 001238 198 AIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTALLSGQIPPELGDCTELQYIYLYEN 277 (1117)
Q Consensus 198 ~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~n 277 (1117)
+|+|..|+.-...+|..|..++.|+-|++++|.+. .+|++++.+++|+.|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-------------------------~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-------------------------ILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-------------------------cCChhhhhhcceeEEeeccC
Confidence 88888776555556655555555555555555443 23334444444444444444
Q ss_pred ccCCcCCccCCCCCCCcEEEccCCcCcccCCcCC
Q 001238 278 ALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPEL 311 (1117)
Q Consensus 278 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~ 311 (1117)
.+- .+|..++.++.|++|++.+|+++ .+|+++
T Consensus 161 dll-~lpkeig~lt~lrelhiqgnrl~-vlppel 192 (264)
T KOG0617|consen 161 DLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPEL 192 (264)
T ss_pred chh-hCcHHHHHHHHHHHHhcccceee-ecChhh
Confidence 444 34444444444444444444444 334333
No 435
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.77 E-value=1.6e-19 Score=212.91 Aligned_cols=249 Identities=22% Similarity=0.223 Sum_probs=178.3
Q ss_pred CCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCC-ccchHHHHHHHHH--HhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 777 SLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASD-KISTGAFSSEIAT--LSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 777 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
.|...+.+|.+.|=+|.+|+++.|. |+||++.+.+ ....+.|.++++- ...++|||.+++.-+-......|+|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5677789999999999999998887 9999987654 4455566655544 3445899999998887777788899999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCC
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSG 933 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~ 933 (1117)
+. .+|.|.+..+ +.+...+.+.|+.|++.|+..+|.. ||+|||||.+|||++.=.-+.|+||.--+...-..
T Consensus 103 vk-hnLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe- 174 (1431)
T KOG1240|consen 103 VK-HNLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE- 174 (1431)
T ss_pred Hh-hhhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC-
Confidence 84 4788888754 4578888899999999999999999 99999999999999998888999997655332111
Q ss_pred CccccCCcccc----ccccCChhhhccC----------C-CCcCCCeeehhhhHHHHHh-CCCCCCCCCCCChhHHHHHH
Q 001238 934 GSFSANPQFAG----SYGYIAPEYANMT----------K-ISEKSDVYSYGVVLLEIIT-GKKPVDASFPDGQHVIQWVR 997 (1117)
Q Consensus 934 ~~~~~~~~~~g----t~~y~aPE~~~~~----------~-~~~~~Dv~SlG~vl~ell~-g~~P~~~~~~~~~~~~~~~~ 997 (1117)
+.....+-+.. -..|.|||.+... . .+++.||||+|||+.|+++ |++||.- .+...
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L--------SQL~a 246 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL--------SQLLA 246 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--------HHHHh
Confidence 11111122222 2369999976431 1 5788999999999999999 8999852 11111
Q ss_pred HHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHH
Q 001238 998 DHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAAL 1052 (1117)
Q Consensus 998 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~ 1052 (1117)
+-.......+.+ +..-.+..++.|+.. |++.||++|-++++.++.
T Consensus 247 -Yr~~~~~~~e~~---Le~Ied~~~Rnlil~------Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 247 -YRSGNADDPEQL---LEKIEDVSLRNLILS------MIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred -HhccCccCHHHH---HHhCcCccHHHHHHH------HHccCchhccCHHHHHHh
Confidence 111111111111 111122345555554 888999999999999886
No 436
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.6e-19 Score=202.37 Aligned_cols=185 Identities=26% Similarity=0.305 Sum_probs=156.7
Q ss_pred eeecCCeEEEEEE----cCCCcEEEEEEeecCCccc--hHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEEEEecCC
Q 001238 784 IGQGRSGIVYKVT----LPSGLTVAVKRFRASDKIS--TGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLFYDYMPN 856 (1117)
Q Consensus 784 lg~G~fg~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~ 856 (1117)
+|+|.||.|+.++ ...|..+|+|+.++..... ......|..++...+ ||.+|++.-.+..+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 7999999999864 3347789999886542111 114556888888886 99999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCcc
Q 001238 857 GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSF 936 (1117)
Q Consensus 857 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 936 (1117)
|.+...+.... .+++.....+...++-|++++|+. +|+|||+|++||+++.+|++++.|||+++..-+..
T Consensus 82 g~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 82 GDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred chhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 99988887653 367777888889999999999999 99999999999999999999999999998765422
Q ss_pred ccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCC
Q 001238 937 SANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDA 984 (1117)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~ 984 (1117)
..+||..|||||++. ....++|.||||++++||++|..||..
T Consensus 152 ----~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 152 ----IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ----hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 128999999999998 678899999999999999999999964
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=2.6e-20 Score=174.82 Aligned_cols=166 Identities=33% Similarity=0.557 Sum_probs=141.2
Q ss_pred ccccccCCeEeccCCCCCCCchhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCc
Q 001238 94 FTSLLSLNRLVLSGTNLTGSIPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLT 173 (1117)
Q Consensus 94 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ 173 (1117)
+..+.+.++|.||+|+++ .+|+.|+.|.+|+.|++++|++. ++|.++..+++|+.|+++-|++. .+|..||.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 456788899999999999 88889999999999999999998 89999999999999999999998 9999999999999
Q ss_pred EEeccCCCCCC-CCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeeccc
Q 001238 174 QLFLYDNQLTD-AIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYT 252 (1117)
Q Consensus 174 ~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~ 252 (1117)
.|||.+|++.. .+|..|..+..|+.|+|++|.. ..+|.+++++++|+.|.+.+|.+..
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndf--e~lp~dvg~lt~lqil~lrdndll~------------------- 164 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDF--EILPPDVGKLTNLQILSLRDNDLLS------------------- 164 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCc--ccCChhhhhhcceeEEeeccCchhh-------------------
Confidence 99999999874 6899999999999999999975 5799999999999999999988752
Q ss_pred ccccccCCcCCCCCCCCcEEecCCCccCCcCCccCCCC
Q 001238 253 ALLSGQIPPELGDCTELQYIYLYENALTGSIPSKLGNL 290 (1117)
Q Consensus 253 ~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 290 (1117)
+|.+++.+++|++|.+.+|+++ .+|..++++
T Consensus 165 ------lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 165 ------LPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred ------CcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 3445555555555566666665 555555443
No 438
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=9.6e-18 Score=174.52 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=107.1
Q ss_pred CCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhcc-----CCCCcceEEeeeecCC---ceE-E
Q 001238 779 TAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRI-----RHRNIVRLLGWGANRK---TKL-L 849 (1117)
Q Consensus 779 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~---~~~-l 849 (1117)
.-.+.||+|+||.||. .-.++.. +||++........+.+.+|+++++.+ .||||++++|++.++. ..+ +
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3457899999999996 3233444 79988765444567899999999999 5799999999998763 333 7
Q ss_pred EEEe--cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHH-HHHhccCCCceeeeccccCeEEEcC----CCcceeccc
Q 001238 850 FYDY--MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGL-SYLHHDCVPAILHRDVKSHNILLGE----RYESCLADF 922 (1117)
Q Consensus 850 v~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivHrDlkp~Nill~~----~~~~kl~Df 922 (1117)
|||| +++|+|.+++.+.. +++. ..++.+++.++ +|||++ +||||||||+||+++. ++.++|+||
T Consensus 83 I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 8999 66899999997632 5555 35677888777 999999 9999999999999974 347999995
Q ss_pred cccc
Q 001238 923 GLAR 926 (1117)
Q Consensus 923 Gla~ 926 (1117)
+.++
T Consensus 154 ~G~~ 157 (210)
T PRK10345 154 IGES 157 (210)
T ss_pred CCCc
Confidence 5443
No 439
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=1.4e-18 Score=186.17 Aligned_cols=201 Identities=21% Similarity=0.313 Sum_probs=131.4
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcC-CCcEEEEEEeecCCc---cchHHHHHHHHHHhccCC----------CCcceEEe
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLP-SGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRH----------RNIVRLLG 839 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H----------~niv~l~~ 839 (1117)
..+.+..++.||.|+|+.||.+.+. +|+++|+|++..... ...+++++|.-....+.+ -.++-.++
T Consensus 10 ~~r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d 89 (288)
T PF14531_consen 10 RPRTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLD 89 (288)
T ss_dssp -EEEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SE
T ss_pred CceEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeE
Confidence 3445566789999999999999854 589999999865432 234567777655555322 12222222
Q ss_pred eee---------cC---C-----ceEEEEEecCCCChhhhhcC---CC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCCc
Q 001238 840 WGA---------NR---K-----TKLLFYDYMPNGTLGMLLHD---GE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVPA 898 (1117)
Q Consensus 840 ~~~---------~~---~-----~~~lv~e~~~~gsL~~~l~~---~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 898 (1117)
... .. . ..+++|+-+ .++|.+++.. .. ....+....+..+..|+++.+++||+. |
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---G 165 (288)
T PF14531_consen 90 LLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---G 165 (288)
T ss_dssp EEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred EEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---c
Confidence 211 11 1 235677777 5688777542 11 111244556677889999999999999 9
Q ss_pred eeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhcc--------CCCCcCCCeeehhh
Q 001238 899 ILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANM--------TKISEKSDVYSYGV 970 (1117)
Q Consensus 899 ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~SlG~ 970 (1117)
+||+||||+|++++.+|.++|+||+.....+.. ... ...+..|.+||.... ..++.+.|.|++|+
T Consensus 166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR----YRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp EEEST-SGGGEEE-TTS-EEE--GGGEEETTEE----EEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred eEecccceeeEEEcCCCCEEEcChHHHeecCce----eec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 999999999999999999999999887765421 111 234578999997644 25788999999999
Q ss_pred hHHHHHhCCCCCCCC
Q 001238 971 VLLEIITGKKPVDAS 985 (1117)
Q Consensus 971 vl~ell~g~~P~~~~ 985 (1117)
++|.|.+|+.||+..
T Consensus 239 ~ly~lWC~~lPf~~~ 253 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLS 253 (288)
T ss_dssp HHHHHHHSS-STCCC
T ss_pred HHHHHHHccCCCCCC
Confidence 999999999999753
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.72 E-value=4e-17 Score=185.76 Aligned_cols=219 Identities=23% Similarity=0.400 Sum_probs=161.1
Q ss_pred HhccCCCCcceEEeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCce-eeecc
Q 001238 826 LSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAI-LHRDV 904 (1117)
Q Consensus 826 l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-vHrDl 904 (1117)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.... -.+++.-...++++++.||+|+|.- +| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 457899999999999999999999999999999999998743 2388889999999999999999987 44 99999
Q ss_pred ccCeEEEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhccCC-------CCcCCCeeehhhhHHHHHh
Q 001238 905 KSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTK-------ISEKSDVYSYGVVLLEIIT 977 (1117)
Q Consensus 905 kp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~SlG~vl~ell~ 977 (1117)
++.|.++|....+|++|||+....... ..........-..-|.|||.+.... .+.++||||||++++|+++
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~--~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEET--AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred ccccceeeeeEEEEechhhhccccccc--ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 999999999999999999998776431 1111222233456799999887631 4678999999999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHhhh
Q 001238 978 GKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIR 1057 (1117)
Q Consensus 978 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~~~ 1057 (1117)
.+.||+........ .+.+....+ .......|.+.... .... ..+.++..||..+|++||++++|...++.+.
T Consensus 154 r~~~~~~~~~~~~~-~eii~~~~~---~~~~~~rP~i~~~~--e~~~--~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDP-DEIILRVKK---GGSNPFRPSIELLN--ELPP--ELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccCccccccccCCh-HHHHHHHHh---cCCCCcCcchhhhh--hcch--HHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 99999764333222 222222222 11122223332111 0111 2334556699999999999999998887765
Q ss_pred cC
Q 001238 1058 QE 1059 (1117)
Q Consensus 1058 ~~ 1059 (1117)
..
T Consensus 226 ~~ 227 (484)
T KOG1023|consen 226 KG 227 (484)
T ss_pred cc
Confidence 54
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=1.2e-19 Score=206.13 Aligned_cols=88 Identities=26% Similarity=0.303 Sum_probs=38.6
Q ss_pred cCCCCCCCEEEccCCcCCCCCCcccc-----cCCCCceEEccCCcccc----ccchhhhcccccccccccCCcCCCCCC-
Q 001238 479 IGNLKNLNFLDLGSNRLTGSIPDEIT-----GCRNLTFLDVHSNSIAG----NLPAGLHQLVRLQFADLSDNSVGGMLS- 548 (1117)
Q Consensus 479 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~i~~~~~- 548 (1117)
+..+++|++|++++|++++.....+. ..+.|++|++++|.++. .+...+..+++|+++++++|.++....
T Consensus 217 ~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~ 296 (319)
T cd00116 217 LASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQ 296 (319)
T ss_pred hcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHH
Confidence 33445555555555555432222221 12455555555555541 122333444555555555555553321
Q ss_pred ---CCcCCC-ccccEEeccccc
Q 001238 549 ---PDLGSL-SSLTKLVLNKNR 566 (1117)
Q Consensus 549 ---~~~~~l-~~L~~L~L~~N~ 566 (1117)
..+... +.|+.|++.+|.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 297 LLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHHhhcCCchhhcccCCCC
Confidence 112222 355555555554
No 442
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=5.1e-17 Score=173.72 Aligned_cols=143 Identities=19% Similarity=0.248 Sum_probs=113.0
Q ss_pred cCCCCCCeeeecCCeEEEEEE--cCCCcEEEEEEeecCCcc------------------------chHHHHHHHHHHhcc
Q 001238 776 RSLTAGNIIGQGRSGIVYKVT--LPSGLTVAVKRFRASDKI------------------------STGAFSSEIATLSRI 829 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 829 (1117)
..|.+.+.||+|+||.||+|. ..+|+.||||+++..... ....+.+|++.++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358889999999999999997 568999999998754210 012356899999999
Q ss_pred CCC--CcceEEeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCc-eeeecccc
Q 001238 830 RHR--NIVRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPA-ILHRDVKS 906 (1117)
Q Consensus 830 ~H~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivHrDlkp 906 (1117)
.+. .+++++++ ...++||||++++++....... ...+..++..++.|++.+++|||++ + |+||||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 763 34555543 2358999999998887654322 2255667789999999999999999 8 99999999
Q ss_pred CeEEEcCCCcceecccccccccc
Q 001238 907 HNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 907 ~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
+||+++ ++.++++|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999988654
No 443
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=2.2e-17 Score=174.77 Aligned_cols=199 Identities=25% Similarity=0.287 Sum_probs=134.8
Q ss_pred CCCCcceEEeeeec---------------------------CCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHH
Q 001238 830 RHRNIVRLLGWGAN---------------------------RKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIAL 882 (1117)
Q Consensus 830 ~H~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 882 (1117)
+|||||++.++|.+ ....|+||...+ .+|..++..+. .+...+.-+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC----CchHHHHHHHH
Confidence 59999999887643 224588997764 58888887653 55677788999
Q ss_pred HHHHHHHHHhccCCCceeeeccccCeEEE--cCCC--cceeccccccccccCCCC--CccccCCccccccccCChhhhcc
Q 001238 883 GVAEGLSYLHHDCVPAILHRDVKSHNILL--GERY--ESCLADFGLARLVEDDSG--GSFSANPQFAGSYGYIAPEYANM 956 (1117)
Q Consensus 883 ~i~~~L~~LH~~~~~~ivHrDlkp~Nill--~~~~--~~kl~DfGla~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~ 956 (1117)
|+++|+.|||.+ ||.|||+|++|||+ |+|+ ...++|||.+-.-....- ..........|...-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 99999999999998 4443 457999998743221000 00111223457778999998865
Q ss_pred CC------CCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCCccccCcccCCCCchhHHHHHHHHh
Q 001238 957 TK------ISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDPVEVLDPKLQGHPDTQIQEMLQALG 1030 (1117)
Q Consensus 957 ~~------~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 1030 (1117)
.+ --.|+|.|+.|.+.||++...-||.. .+....+. +. ..+.--|.++...+...+++...
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~---rGem~L~~-r~-------Yqe~qLPalp~~vpp~~rqlV~~-- 492 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK---RGEMLLDT-RT-------YQESQLPALPSRVPPVARQLVFD-- 492 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccc---cchheech-hh-------hhhhhCCCCcccCChHHHHHHHH--
Confidence 32 13589999999999999999999964 12111111 11 11111244455555556665554
Q ss_pred HhhhccCCCCCCCCCHHHHHHHH
Q 001238 1031 ISLLCTSNRAEDRPTMKDVAALL 1053 (1117)
Q Consensus 1031 i~~~C~~~~p~~RPs~~~v~~~L 1053 (1117)
.++.||.+|++..-....+
T Consensus 493 ----lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 493 ----LLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred ----HhcCCccccCCccHHHhHH
Confidence 7889999999865554444
No 444
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=2.6e-17 Score=199.78 Aligned_cols=196 Identities=20% Similarity=0.233 Sum_probs=160.0
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccC---CCCcceEEeeeecCCceEEE
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIR---HRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv 850 (1117)
....|.|.+.||+|+||+||+|...+|+.||+|+-+..... +|.--.+++.+|+ -+.|..+..++...+.-++|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 34578888999999999999999888999999998766542 2333345555555 34556666666777888999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-------CCcceecccc
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-------RYESCLADFG 923 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-------~~~~kl~DfG 923 (1117)
+||.+.|+|.+++... +.++|.-++.++.|+++.++.||.. +|||+||||+|++|.. ...++|+|||
T Consensus 773 ~ey~~~Gtlld~~N~~---~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINTN---KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred eeccccccHHHhhccC---CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 9999999999999844 4489999999999999999999999 9999999999999952 3467999999
Q ss_pred ccccccCCCCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCC
Q 001238 924 LARLVEDDSGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKK 980 (1117)
Q Consensus 924 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~ 980 (1117)
-+.....-..+ ......++|-.+--+|...++.++..+|.|.++.+++-|+.|++
T Consensus 847 ~siDm~lfp~~--~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 847 RSIDMKLFPDG--TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceeeeEcCCC--cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 98655432222 23345678889999999999999999999999999999999985
No 445
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=3e-19 Score=203.05 Aligned_cols=139 Identities=22% Similarity=0.289 Sum_probs=87.8
Q ss_pred cCCCCCCCCcEEecCCCccCCc----CCccCCCCCCCcEEEccCCcCccc----CCcCCCCCCCCCEEEcCCCcCCCCCc
Q 001238 261 PELGDCTELQYIYLYENALTGS----IPSKLGNLKNLVNLFLWQNNLVGI----IPPELGNCSQLSIIDISMNSLTGSIP 332 (1117)
Q Consensus 261 ~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~LdLs~N~l~~~~p 332 (1117)
..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+.+. ++..+..+++|++|++++|.+++...
T Consensus 159 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~ 238 (319)
T cd00116 159 KALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGA 238 (319)
T ss_pred HHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHH
Confidence 3455566677777777777632 233344556777777777777633 23345667788888888888775322
Q ss_pred cccC-----CCCCcceEecccccccC----cccccccCCCCCcEEEecCccccCC----CCcccccc-cchHHHHhcccc
Q 001238 333 QTLG-----NLTSLQELQLSVNQISG----EIPAQIGNCQRLAQIELDNNQITGA----IPSEFGNL-SNLTLLFVWHNR 398 (1117)
Q Consensus 333 ~~l~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l-~~L~~L~L~~N~ 398 (1117)
..+. ..+.|++|++++|.++. .+...+..+++|+++++++|.++.. ....+... +.|++|++.+|.
T Consensus 239 ~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 239 AALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 2222 23678888888888762 2334555667888888888888744 23333334 577888877765
Q ss_pred c
Q 001238 399 L 399 (1117)
Q Consensus 399 l 399 (1117)
+
T Consensus 319 ~ 319 (319)
T cd00116 319 F 319 (319)
T ss_pred C
Confidence 3
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2.2e-16 Score=165.57 Aligned_cols=141 Identities=21% Similarity=0.257 Sum_probs=112.2
Q ss_pred hccCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCcc----------------------chHHHHHHHHHHhccCC
Q 001238 774 ATRSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKI----------------------STGAFSSEIATLSRIRH 831 (1117)
Q Consensus 774 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~H 831 (1117)
....|.+.+.||+|+||.||++..++|+.||||++...... ....+..|+.++.++.|
T Consensus 13 ~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 13 RGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred cCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 33458888999999999999999888999999987643210 01235678999999988
Q ss_pred C--CcceEEeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeE
Q 001238 832 R--NIVRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNI 909 (1117)
Q Consensus 832 ~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Ni 909 (1117)
+ .+++.++. ...++||||+++++|...... .....++.++++++.++|+. +|+||||||+||
T Consensus 93 ~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Ni 156 (198)
T cd05144 93 EGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNI 156 (198)
T ss_pred cCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccE
Confidence 7 45555543 345899999999998765431 23457889999999999998 999999999999
Q ss_pred EEcCCCcceeccccccccccC
Q 001238 910 LLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 910 ll~~~~~~kl~DfGla~~~~~ 930 (1117)
++++++.++|+|||.+.....
T Consensus 157 ll~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 157 LVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred EEcCCCcEEEEECCccccCCC
Confidence 999999999999999976543
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=2.3e-16 Score=167.58 Aligned_cols=134 Identities=19% Similarity=0.300 Sum_probs=113.8
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCcc--------chHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKI--------STGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
+.||+|++|.||+|.+ .|..|++|+....... ...++.+|++++..++|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6788999986543211 123577899999999999988777777777888999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++|++|.+++.... + ++..++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.++.
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999886531 2 7889999999999999999 999999999999999 78899999999874
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.66 E-value=7.6e-16 Score=186.16 Aligned_cols=137 Identities=20% Similarity=0.302 Sum_probs=111.9
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecC--C------ccchHHHHHHHHHHhccCCCCcceEEeeeecCCce
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRAS--D------KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~--~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 847 (1117)
..|...+.||+|+||+||+|.+... .+++|+.... . ....+++.+|++++++++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 4456789999999999999987443 4444443211 1 11234688999999999999999888877777788
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++||||+++++|.+++. ....++.+++++++|||+. +|+|||+||+||++ +++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999988775 3467899999999999999 99999999999999 678999999999975
Q ss_pred c
Q 001238 928 V 928 (1117)
Q Consensus 928 ~ 928 (1117)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 3
No 449
>PLN03150 hypothetical protein; Provisional
Probab=99.66 E-value=2e-16 Score=192.73 Aligned_cols=152 Identities=30% Similarity=0.461 Sum_probs=94.4
Q ss_pred ccchhHHHHHHHHHhhccCCCCCCCCCCCCCCC--CcceeeEEecCC-----CcEEEEecccccccCcCCccccccccCC
Q 001238 29 YAVNRQGEALLSWKRNWKGSDDGLSNWSPSDET--PCKWFGVSCNLN-----NQVVGLDLRYVDLLGHVPTNFTSLLSLN 101 (1117)
Q Consensus 29 ~~~~~~~~aLl~~k~~~~~~~~~l~sW~~~~~~--~C~W~gv~C~~~-----~~v~~l~l~~~~l~~~~~~~~~~l~~L~ 101 (1117)
.+...|..||+++|+++.++. ..+|..+.+. .|.|.||.|+.. .+|..|+|+++++.|.+|..|..+++|+
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~--~~~W~g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~ 445 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPL--RFGWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQ 445 (623)
T ss_pred ccCchHHHHHHHHHHhcCCcc--cCCCCCCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCC
Confidence 345678999999999996543 2589742111 127999999532 1366666666666666666666666666
Q ss_pred eEeccCCCCCCCchhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCC-cCCcEEeccCC
Q 001238 102 RLVLSGTNLTGSIPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNL-SSLTQLFLYDN 180 (1117)
Q Consensus 102 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L-~~L~~L~L~~N 180 (1117)
.|+|++|+++|.+|..++.+++|++|||++|+++|.+|+.+++|++|++|+|++|+++|.+|..++.+ .++..+++.+|
T Consensus 446 ~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 446 SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525 (623)
T ss_pred EEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCC
Confidence 66666666666666666666666666666666666666666666666666666666666666555542 34455555555
Q ss_pred CC
Q 001238 181 QL 182 (1117)
Q Consensus 181 ~l 182 (1117)
..
T Consensus 526 ~~ 527 (623)
T PLN03150 526 AG 527 (623)
T ss_pred cc
Confidence 43
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=5.1e-16 Score=163.21 Aligned_cols=130 Identities=22% Similarity=0.382 Sum_probs=106.8
Q ss_pred eeeecCCeEEEEEEcCCCcEEEEEEeecCCc--------cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 783 IIGQGRSGIVYKVTLPSGLTVAVKRFRASDK--------ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 783 ~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.||+|+||.||+|.+ +|..|++|+...... ....++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 678899998654321 11245778999999999887665555555667779999999
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
+|++|.+++.... . .++.+++.+|+++|+. +++|||++|+||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN----D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH----H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998875431 1 7899999999999999 999999999999999 78999999999875
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=7.1e-17 Score=179.37 Aligned_cols=126 Identities=24% Similarity=0.384 Sum_probs=111.1
Q ss_pred ceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 846 TKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 846 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
..|+.|++|...+|.+++.+.+.....++.....++.|++.|++| + +.+|||+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 468999999999999999877766678899999999999999999 6 8999999999999999999999999998
Q ss_pred ccccCCCC--CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHh
Q 001238 926 RLVEDDSG--GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIIT 977 (1117)
Q Consensus 926 ~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~ 977 (1117)
........ ......+...||..||+||.+.+..|+.|+||||+|++++|++.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 76654331 12334567789999999999999999999999999999999998
No 452
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62 E-value=4.4e-16 Score=184.46 Aligned_cols=167 Identities=26% Similarity=0.342 Sum_probs=122.0
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEec
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYM 854 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 854 (1117)
.+|..++.|..|+||.||.++++. .+.+|+|+-+... -.++ ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-----ilRn---ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----ILRN---ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccch-----hhhc---cccccCCccee-------------------
Confidence 568888999999999999998764 6678885433221 0111 22222333333
Q ss_pred CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCC
Q 001238 855 PNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGG 934 (1117)
Q Consensus 855 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 934 (1117)
|+=.+.++.. +.++.+. +.+++|+|+. +|+|||+||+|.+|+.-|++|+.|||+++........
T Consensus 136 --gDc~tllk~~---g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 --GDCATLLKNI---GPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred --chhhhhcccC---CCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 3434444432 2344332 7899999999 9999999999999999999999999998754321111
Q ss_pred -----------ccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCC
Q 001238 935 -----------SFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVDAS 985 (1117)
Q Consensus 935 -----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~ 985 (1117)
..-...+.+||+.|.|||++..+.|+..+|.|++|+++||.+.|+.||.+.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd 261 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 261 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC
Confidence 111234568999999999999999999999999999999999999999764
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=9e-15 Score=152.06 Aligned_cols=137 Identities=20% Similarity=0.267 Sum_probs=100.5
Q ss_pred CCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccc--hHH----------------------HHHHHHHHhccCCCC--c
Q 001238 781 GNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKIS--TGA----------------------FSSEIATLSRIRHRN--I 834 (1117)
Q Consensus 781 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~H~n--i 834 (1117)
.+.||+|+||+||+|...+|+.||||+++...... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998789999999987542211 111 135666666665443 4
Q ss_pred ceEEeeeecCCceEEEEEecCCCChhh-hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-cCCCceeeeccccCeEEEc
Q 001238 835 VRLLGWGANRKTKLLFYDYMPNGTLGM-LLHDGECAGLLEWDTRFKIALGVAEGLSYLHH-DCVPAILHRDVKSHNILLG 912 (1117)
Q Consensus 835 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivHrDlkp~Nill~ 912 (1117)
++.+++ ...++||||++++.+.. .+.... .. .++..++.+++.++.++|. . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 455543 24589999999965422 121110 11 5678899999999999999 7 999999999999999
Q ss_pred CCCcceeccccccccccC
Q 001238 913 ERYESCLADFGLARLVED 930 (1117)
Q Consensus 913 ~~~~~kl~DfGla~~~~~ 930 (1117)
++.++++|||.+.....
T Consensus 150 -~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 -DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred -CCcEEEEECcccccccC
Confidence 89999999999976543
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=1.7e-14 Score=144.13 Aligned_cols=136 Identities=20% Similarity=0.218 Sum_probs=115.4
Q ss_pred CCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCC--CCcceEEeeeecCCceEEEEEecCCC
Q 001238 780 AGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRH--RNIVRLLGWGANRKTKLLFYDYMPNG 857 (1117)
Q Consensus 780 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~~~g 857 (1117)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+++++.++| .++++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35779999999999998744 7899999865433 4678999999999976 59999999888888899999999987
Q ss_pred ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 858 TLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 858 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
.+..+ +......++.+++++++++|....++++|||++|+||++++.+.++++|||.++..
T Consensus 79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 76543 44667788999999999999864457999999999999999899999999998753
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.56 E-value=2.3e-14 Score=153.66 Aligned_cols=136 Identities=19% Similarity=0.311 Sum_probs=106.6
Q ss_pred CCeee-ecCCeEEEEEEcCCCcEEEEEEeecCC-------------ccchHHHHHHHHHHhccCCCCc--ceEEeeeecC
Q 001238 781 GNIIG-QGRSGIVYKVTLPSGLTVAVKRFRASD-------------KISTGAFSSEIATLSRIRHRNI--VRLLGWGANR 844 (1117)
Q Consensus 781 ~~~lg-~G~fg~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~ 844 (1117)
...|| .||.|+||.++.. +..+|||++.... .....++.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45688 8999999999874 7789999885421 1223467889999999998875 6777764433
Q ss_pred Cc----eEEEEEecCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCccee
Q 001238 845 KT----KLLFYDYMPN-GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCL 919 (1117)
Q Consensus 845 ~~----~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 919 (1117)
.. .++||||++| .+|.+++... .++.. .+.+++.++.+||+. ||+||||||+|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 22 2599999997 6898887653 24443 356899999999999 9999999999999999999999
Q ss_pred ccccccccc
Q 001238 920 ADFGLARLV 928 (1117)
Q Consensus 920 ~DfGla~~~ 928 (1117)
+|||.++..
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999998753
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=3.3e-15 Score=179.10 Aligned_cols=257 Identities=22% Similarity=0.279 Sum_probs=186.2
Q ss_pred cCCCCCCeeeecCCeEEEEEEcC--CCcEEEEEEeecCC--ccchHHHHHHHHHHhccC-CCCcceEEeeeecCCceEEE
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLP--SGLTVAVKRFRASD--KISTGAFSSEIATLSRIR-HRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 850 (1117)
..|.+.+.||+|+|+.|-..... ....+|+|.+.... .........|..+-+.+. |+|++++++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45777788999999999887643 34567777665442 223344556888777776 99999999999999999999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHh-ccCCCceeeeccccCeEEEcCCC-cceeccccccccc
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLH-HDCVPAILHRDVKSHNILLGERY-ESCLADFGLARLV 928 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfGla~~~ 928 (1117)
.||..++++.+-+...... ..+...+..++.|+..++.|+| .. +++|||+||+|.+++..+ ..+++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~~~-~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDST-GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCCcc-CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999998888322211 2556677789999999999999 77 999999999999999999 9999999999887
Q ss_pred cCCCCCccccCCcccc-ccccCChhhhccC-CCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCC
Q 001238 929 EDDSGGSFSANPQFAG-SYGYIAPEYANMT-KISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDP 1006 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1117)
.... +........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++...........|..... ..
T Consensus 176 ~~~~-g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~----~~ 250 (601)
T KOG0590|consen 176 RNKN-GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKG----RF 250 (601)
T ss_pred cccC-CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccc----cc
Confidence 6621 22233345567 9999999988774 4568999999999999999999999765444433333333210 00
Q ss_pred ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHH
Q 001238 1007 VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAA 1051 (1117)
Q Consensus 1007 ~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~ 1051 (1117)
.. ............++.. ++..+|+.|.+.+++..
T Consensus 251 ~~----~~~~~~~~~~~~~l~k------~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 251 TQ----LPWNSISDQAHDLLHK------ILKENPSNRLSIEELKL 285 (601)
T ss_pred cc----CccccCChhhhhcccc------cccCCchhccccccccc
Confidence 01 1111122222333333 66688999998777644
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.46 E-value=5.7e-15 Score=163.74 Aligned_cols=213 Identities=34% Similarity=0.500 Sum_probs=133.2
Q ss_pred eEeccCCCCCCCchh--hhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCcEEeccC
Q 001238 102 RLVLSGTNLTGSIPK--EIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQLFLYD 179 (1117)
Q Consensus 102 ~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~ 179 (1117)
+|.|++.++. .+|- .=..|.--...||+.|+++ ++|.+++.+..|+.|.|..|.+. .+|..+++|..|++|||+.
T Consensus 54 ~l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~ 130 (722)
T KOG0532|consen 54 RLLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSS 130 (722)
T ss_pred ccccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhcc
Confidence 3555555554 3331 1134555566777777777 77777777777777777777777 7777777777777777777
Q ss_pred CCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeecccccccccC
Q 001238 180 NQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTALLSGQI 259 (1117)
Q Consensus 180 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~l~~~~ 259 (1117)
|+++ .+|..++.|+ |+.|-+++|++ + .+
T Consensus 131 NqlS-~lp~~lC~lp-Lkvli~sNNkl-------------------------~-------------------------~l 158 (722)
T KOG0532|consen 131 NQLS-HLPDGLCDLP-LKVLIVSNNKL-------------------------T-------------------------SL 158 (722)
T ss_pred chhh-cCChhhhcCc-ceeEEEecCcc-------------------------c-------------------------cC
Confidence 7776 4565555544 33333333332 1 23
Q ss_pred CcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCC
Q 001238 260 PPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLT 339 (1117)
Q Consensus 260 p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~ 339 (1117)
|+.++.+..|..|+.+.|++. .+|+.++.+.+|+.|.++.|++. .+|+++..| .|..||+|.|++. .+|-.|.+|+
T Consensus 159 p~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~ 234 (722)
T KOG0532|consen 159 PEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMR 234 (722)
T ss_pred CcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhh
Confidence 444444455556666666666 56666777777777777777776 456666633 4667777777777 5677777777
Q ss_pred CcceEecccccccCcccccccCCCC---CcEEEecCcc
Q 001238 340 SLQELQLSVNQISGEIPAQIGNCQR---LAQIELDNNQ 374 (1117)
Q Consensus 340 ~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~ 374 (1117)
.|++|-|.+|.+. ..|..++-..+ .++|+..-++
T Consensus 235 ~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 235 HLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred hheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 7777777777776 55555543322 3455555553
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.44 E-value=1.6e-14 Score=160.27 Aligned_cols=176 Identities=28% Similarity=0.416 Sum_probs=136.1
Q ss_pred cccccCCeEeccCCCCCCCchhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCCcCCCCchhccCCcCCcE
Q 001238 95 TSLLSLNRLVLSGTNLTGSIPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQ 174 (1117)
Q Consensus 95 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~ 174 (1117)
-.++.-...+|+.|++. ++|.++..+..|+.|.|.+|.+. .+|..+++|..|++|||+.|+++ .+|..+..|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 46677788999999998 99999999999999999999998 89999999999999999999999 9999999998 999
Q ss_pred EeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeeccccc
Q 001238 175 LFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTAL 254 (1117)
Q Consensus 175 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~ 254 (1117)
|-+++|+++ .+|+.++.+..|..|+.+.|... ++|..++.+++|+.|.+..|.+.
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~--slpsql~~l~slr~l~vrRn~l~---------------------- 202 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ--SLPSQLGYLTSLRDLNVRRNHLE---------------------- 202 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh--hchHHhhhHHHHHHHHHhhhhhh----------------------
Confidence 999999998 69999999999999999988753 45555555555555555544443
Q ss_pred ccccCCcCCCCCCCCcEEecCCCccCCcCCccCCCCCCCcEEEccCCcCc
Q 001238 255 LSGQIPPELGDCTELQYIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLV 304 (1117)
Q Consensus 255 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 304 (1117)
.+|+++.. -.|..||+++|+++ .+|-.|.+|++|++|.|.+|-+.
T Consensus 203 ---~lp~El~~-LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 203 ---DLPEELCS-LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred ---hCCHHHhC-CceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 23334432 23555666666665 45555555555555555555554
No 459
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=9.8e-13 Score=153.42 Aligned_cols=145 Identities=20% Similarity=0.207 Sum_probs=102.7
Q ss_pred cCCCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccch---------------------------------------
Q 001238 776 RSLTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKIST--------------------------------------- 816 (1117)
Q Consensus 776 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~--------------------------------------- 816 (1117)
..|. .+.||.|++|.||+|+.++|+.||||+.+.......
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 368999999999999999999999999865411000
Q ss_pred -HHHHHHHHHHhccC----CCCcceEEee-eecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHH-HHH
Q 001238 817 -GAFSSEIATLSRIR----HRNIVRLLGW-GANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAE-GLS 889 (1117)
Q Consensus 817 -~~~~~E~~~l~~l~----H~niv~l~~~-~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~L~ 889 (1117)
-.|.+|++.+.+++ |.+-+.+-.. .......++||||++|+++.++...... + . .+.+++.+++. .+.
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~-~---~~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-G-L---DRKALAENLARSFLN 271 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-C-C---CHHHHHHHHHHHHHH
Confidence 02455666666652 3222222222 2223457999999999999887653211 1 2 23456666666 478
Q ss_pred HHhccCCCceeeeccccCeEEEcCCCcceecccccccccc
Q 001238 890 YLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 890 ~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
.+|.. |++|+|+||.||+++++++++++|||++..+.
T Consensus 272 ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 272 QVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 88988 99999999999999999999999999998765
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.37 E-value=9.4e-13 Score=154.09 Aligned_cols=180 Identities=35% Similarity=0.524 Sum_probs=93.1
Q ss_pred CCcceEecccccccCcccccccCCC-CCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCCcccccceee
Q 001238 339 TSLQELQLSVNQISGEIPAQIGNCQ-RLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVD 417 (1117)
Q Consensus 339 ~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 417 (1117)
+.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+..++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 44444444444444 3333333332 4444444444444 33334444555555555555554 3333333445555555
Q ss_pred cccccccCCCcccccCCCCCCeeeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCC
Q 001238 418 LSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTG 497 (1117)
Q Consensus 418 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 497 (1117)
+++|+++ .+|........|++|.+++|++. ..+..+.++..+..+.+.+|++.. .+..++++++++.|++++|.++.
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~ 269 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISS 269 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceeccccccccc
Confidence 5555555 34444444444555555555432 234455555556666666666552 24556666666666666666663
Q ss_pred CCCcccccCCCCceEEccCCccccccchh
Q 001238 498 SIPDEITGCRNLTFLDVHSNSIAGNLPAG 526 (1117)
Q Consensus 498 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 526 (1117)
..+ +..+.+++.|++++|.+...++..
T Consensus 270 i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 270 ISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred ccc--ccccCccCEEeccCccccccchhh
Confidence 322 666666666666666666554443
No 461
>PLN03150 hypothetical protein; Provisional
Probab=99.35 E-value=6e-13 Score=162.46 Aligned_cols=115 Identities=33% Similarity=0.512 Sum_probs=84.6
Q ss_pred ceeEEeccccccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEeccCccccCCcch-hhhcccceEEEe
Q 001238 580 KLQLLDLSSNQLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDLSHNELSGDLHF-LAELQNLVVLNV 658 (1117)
Q Consensus 580 ~L~~L~Ls~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~-l~~l~~L~~L~l 658 (1117)
.++.|+|++|.++|.+|..++.+++| +.|+|++|+|+|.+|..+..+++|+.|||++|++++.+|. +..+++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L-~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHL-QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCC-CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 36677777777777777777777777 6777777777777777777788888888888888876665 777888888888
Q ss_pred ecccccCCCCCCc--ccccCCcccccCCCCCCcCC--CCCC
Q 001238 659 SHNNFSGRVPDTP--FFAKLPLSVLSGNPSLCFSG--NQCA 695 (1117)
Q Consensus 659 s~N~l~~~~p~~~--~~~~~~~~~~~gN~~~c~~~--~~c~ 695 (1117)
++|+|+|.+|... .+.++....+.+|+++|+.+ ..|.
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 8888888887642 12344566789999999863 4664
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.33 E-value=1.9e-12 Score=151.46 Aligned_cols=148 Identities=36% Similarity=0.496 Sum_probs=79.5
Q ss_pred EEecCCCccCCcCCccCCCCCCCcEEEccCCcCcccCCcCCCCCC-CCCEEEcCCCcCCCCCccccCCCCCcceEecccc
Q 001238 271 YIYLYENALTGSIPSKLGNLKNLVNLFLWQNNLVGIIPPELGNCS-QLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVN 349 (1117)
Q Consensus 271 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N 349 (1117)
.+++..|.+.. .+..+..++.++.|++.+|.++ .+++....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 45555555532 2333444556666666666666 4444555553 6666666666666 44445566666666666666
Q ss_pred cccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCCcccccceeeccccccc
Q 001238 350 QISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLT 424 (1117)
Q Consensus 350 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 424 (1117)
+++ .+|...+.++.|+.|++++|++. .+|........|++|.+++|++. ..+..+.+++++..+.+.+|++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~ 245 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE 245 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee
Confidence 665 44444445556666666666665 34443334444555555555433 23344444555555555555544
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=4.2e-12 Score=132.37 Aligned_cols=156 Identities=21% Similarity=0.335 Sum_probs=117.6
Q ss_pred HHHhccCCCCcceEEeeeecCC-----ceEEEEEecCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhccCCC
Q 001238 824 ATLSRIRHRNIVRLLGWGANRK-----TKLLFYDYMPNGTLGMLLHDGE-CAGLLEWDTRFKIALGVAEGLSYLHHDCVP 897 (1117)
Q Consensus 824 ~~l~~l~H~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 897 (1117)
.-+-++.|-|||+++.|+.+.. ...++.|||..|++..+|++.+ ....+......+++.||..||.|||+ +.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 3455567999999999886643 3578899999999999998753 23346777788999999999999999 588
Q ss_pred ceeeeccccCeEEEcCCCcceeccccccccccCC-CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHH
Q 001238 898 AILHRDVKSHNILLGERYESCLADFGLARLVEDD-SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEII 976 (1117)
Q Consensus 898 ~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell 976 (1117)
.|+|+++..+-|++..+|-+|+.- +.-...... ............+-++|.|||.-.....+.++|||+||+...||.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 999999999999999998888742 111111000 001111222335678999999887778889999999999999999
Q ss_pred hCCCC
Q 001238 977 TGKKP 981 (1117)
Q Consensus 977 ~g~~P 981 (1117)
.+..-
T Consensus 277 ilEiq 281 (458)
T KOG1266|consen 277 ILEIQ 281 (458)
T ss_pred Hheec
Confidence 98754
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=2.3e-11 Score=124.28 Aligned_cols=130 Identities=18% Similarity=0.145 Sum_probs=97.7
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCc-ceEEeeeecCCceEEEEEecCCCChh
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNI-VRLLGWGANRKTKLLFYDYMPNGTLG 860 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~gsL~ 860 (1117)
+.++.|.++.||+++.. ++.|++|+...... ....+.+|+++++.+.+.++ ++++.+.. ...++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence 56899999999999874 77899999765432 23357889999999866554 45555433 3458999999998875
Q ss_pred hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccC--CCceeeeccccCeEEEcCCCcceecccccccc
Q 001238 861 MLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDC--VPAILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 861 ~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
.. . . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~--~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TE--D------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc--c------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 43 0 0 11345678999999999983 12369999999999999 66899999998864
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.23 E-value=2.3e-11 Score=143.05 Aligned_cols=147 Identities=15% Similarity=0.099 Sum_probs=96.6
Q ss_pred HhccCCCCCCeeeecCCeEEEEEEcCC-CcEEEEEEeecCCccc----------------------------------h-
Q 001238 773 DATRSLTAGNIIGQGRSGIVYKVTLPS-GLTVAVKRFRASDKIS----------------------------------T- 816 (1117)
Q Consensus 773 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~- 816 (1117)
..-..|+. +.||.|++|.||+|+.++ |+.||||+.++..... .
T Consensus 117 ~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~ 195 (537)
T PRK04750 117 EWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK 195 (537)
T ss_pred HHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence 34456776 789999999999999877 9999999997541100 0
Q ss_pred -----HHHHHHHHHHhccC----CCCcceEEeeee-cCCceEEEEEecCCCChhhhh--cCCC-CCCCCCHHHHHHHHHH
Q 001238 817 -----GAFSSEIATLSRIR----HRNIVRLLGWGA-NRKTKLLFYDYMPNGTLGMLL--HDGE-CAGLLEWDTRFKIALG 883 (1117)
Q Consensus 817 -----~~~~~E~~~l~~l~----H~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l--~~~~-~~~~l~~~~~~~i~~~ 883 (1117)
-.|.+|+..+.+++ +...+.+-..+. .....++||||++|+.+.++- .... ....+....+..++.|
T Consensus 196 ~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 196 TLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred HHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 02445665555553 333333333222 245678999999999997742 2211 0001222223333333
Q ss_pred HHHHHHHHhccCCCceeeeccccCeEEEcCCC----cceeccccccccccC
Q 001238 884 VAEGLSYLHHDCVPAILHRDVKSHNILLGERY----ESCLADFGLARLVED 930 (1117)
Q Consensus 884 i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~DfGla~~~~~ 930 (1117)
++.. |++|+|+||.||+++.++ +++++|||++..+..
T Consensus 276 -------if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 -------VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3456 999999999999999888 999999999987754
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=2e-11 Score=139.37 Aligned_cols=201 Identities=25% Similarity=0.270 Sum_probs=158.0
Q ss_pred cCCCCCCeeee--cCCeEEEEEEc---CCCcEEEEEEeecCC--ccchHHHHHHHHHHhcc-CCCCcceEEeeeecCCce
Q 001238 776 RSLTAGNIIGQ--GRSGIVYKVTL---PSGLTVAVKRFRASD--KISTGAFSSEIATLSRI-RHRNIVRLLGWGANRKTK 847 (1117)
Q Consensus 776 ~~~~~~~~lg~--G~fg~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 847 (1117)
..|-+.+.+|. |.+|.||.+.. .++..+|+|+-+..- .....+=.+|+...+++ .|++.|+.+..+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 34666788999 99999999865 468899999854322 22223335677777777 599999999999999999
Q ss_pred EEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHH----HHHHHhccCCCceeeeccccCeEEEcCC-Ccceeccc
Q 001238 848 LLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAE----GLSYLHHDCVPAILHRDVKSHNILLGER-YESCLADF 922 (1117)
Q Consensus 848 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~Df 922 (1117)
++-.|++. .++..+.+... ..++....+.+..+..+ |+.++|+. .++|-|+||.||+..++ ..++++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 99999984 77777776543 23677778888888888 99999999 99999999999999999 88999999
Q ss_pred cccccccCCCCCc-cccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCC
Q 001238 923 GLARLVEDDSGGS-FSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVD 983 (1117)
Q Consensus 923 Gla~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~ 983 (1117)
|+...+.+..-.. ........|...|++||..+ .-++.++|+|++|.++.+..++..+..
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhccccc
Confidence 9999887654222 22222336778899999876 678899999999999999999877653
No 467
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.18 E-value=3.3e-10 Score=115.67 Aligned_cols=136 Identities=17% Similarity=0.204 Sum_probs=100.5
Q ss_pred CeeeecCCeEEEEEEcCC-------CcEEEEEEeecC-------------Cc---------cchHHHH----HHHHHHhc
Q 001238 782 NIIGQGRSGIVYKVTLPS-------GLTVAVKRFRAS-------------DK---------ISTGAFS----SEIATLSR 828 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~-------~~~vavK~~~~~-------------~~---------~~~~~~~----~E~~~l~~ 828 (1117)
..||.|.=+.||.|...+ +..+|||+++.. +. ...+.+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 579999988532 00 0112233 79999999
Q ss_pred cCC--CCcceEEeeeecCCceEEEEEecCCCChh-hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-hccCCCceeeecc
Q 001238 829 IRH--RNIVRLLGWGANRKTKLLFYDYMPNGTLG-MLLHDGECAGLLEWDTRFKIALGVAEGLSYL-HHDCVPAILHRDV 904 (1117)
Q Consensus 829 l~H--~niv~l~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivHrDl 904 (1117)
+.. -++++.+++ ...++||||+.++.+. ..+++. .++..+...+..+++.++.++ |.. +|||||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 954 567777765 4568999999765442 223221 245556677889999999999 787 9999999
Q ss_pred ccCeEEEcCCCcceecccccccccc
Q 001238 905 KSHNILLGERYESCLADFGLARLVE 929 (1117)
Q Consensus 905 kp~Nill~~~~~~kl~DfGla~~~~ 929 (1117)
++.||++++ +.++++|||.+....
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCceeCC
Confidence 999999974 679999999987654
No 468
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.15 E-value=3.3e-10 Score=130.25 Aligned_cols=168 Identities=19% Similarity=0.244 Sum_probs=130.4
Q ss_pred EcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHH
Q 001238 796 TLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWD 875 (1117)
Q Consensus 796 ~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~ 875 (1117)
+..++.+|.|..++.......+...+-++.++.+|||||+++++.+..++..|+|+|-+. -|..++++. ...
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------~~~ 104 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------GKE 104 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------HHH
Confidence 345688899998876655445567788899999999999999999999999999999874 466677653 355
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCCCCCccccCCccccccccCChhhhc
Q 001238 876 TRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDDSGGSFSANPQFAGSYGYIAPEYAN 955 (1117)
Q Consensus 876 ~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 955 (1117)
.....+.||+.||.|||.+| +++|++|.-.-|+|++.|+.||++|-++........ ......--..|..|+.+.
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~----~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA----PAKSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc----ccccchhhhcccChhhcC
Confidence 66778899999999999776 899999999999999999999999998875543211 111222334567777554
Q ss_pred cCCCCcCCCeeehhhhHHHHHhCC
Q 001238 956 MTKISEKSDVYSYGVVLLEIITGK 979 (1117)
Q Consensus 956 ~~~~~~~~Dv~SlG~vl~ell~g~ 979 (1117)
... -..|.|-||+++||++.|.
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCcc
Confidence 322 3569999999999999993
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.14 E-value=7.9e-12 Score=128.30 Aligned_cols=127 Identities=26% Similarity=0.328 Sum_probs=76.4
Q ss_pred CCCCeeeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCCceEEc
Q 001238 435 KKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNLTFLDV 514 (1117)
Q Consensus 435 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 514 (1117)
+.|+++||++|.|+ .+.++..-.+.++.|+++.|.|... ..+..+++|+.||||+|.++ .+..+-..+.+++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 34444444444444 2333444445555555555555522 23666778888888888887 55566677888888888
Q ss_pred cCCccccccchhhhcccccccccccCCcCCCCCC-CCcCCCccccEEecccccc
Q 001238 515 HSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLS-PDLGSLSSLTKLVLNKNRF 567 (1117)
Q Consensus 515 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~N~l 567 (1117)
++|.|... .++..+.+|..||+++|+|..++. ..+++++-|+.+.|.+|.|
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 88888742 456777777888888887765532 2333333344444433333
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.14 E-value=1.6e-11 Score=143.71 Aligned_cols=219 Identities=28% Similarity=0.352 Sum_probs=143.4
Q ss_pred ccchHHHHhccccccccCCCCCCcccccceeecccccccCCCcccccCCCCCCeeeccCccCCCCCCCCcccccccceec
Q 001238 386 LSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFR 465 (1117)
Q Consensus 386 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 465 (1117)
+..++.+++..|.+.. +-..+..+++|+.|++.+|+|.+ +...+..+.+|++|++++|+|+.+ ..+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccc--cchhhccchhhhe
Confidence 4445555555555552 22335566667777777777763 333355667777777777777654 3345556678888
Q ss_pred cCCCcccccCCCCcCCCCCCCEEEccCCcCCCCCC-cccccCCCCceEEccCCccccccchhhhcccccccccccCCcCC
Q 001238 466 ANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIP-DEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVG 544 (1117)
Q Consensus 466 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 544 (1117)
+.+|.|+.+ ..+..+++|+.+++++|++..+.+ . ...+.+++.+++.+|.+..+ ..+..+..+..+++..|.+.
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccce
Confidence 888888744 356668888999999999885444 2 57788889999999988743 44556666777788889888
Q ss_pred CCCCCCcCCCccccEEeccccccCCCCCcccccccceeEEeccccccccccccccCCchhHHHhhcCCCCccc
Q 001238 545 GMLSPDLGSLSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDLSSNQLSGNIPASLGKIPALAIALNLSWNQIC 617 (1117)
Q Consensus 545 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~ 617 (1117)
.+.........+|+.+++++|++.. .+..+..+..+..||+++|++...- .+...+.+ ..++++.|.+.
T Consensus 222 ~~~~l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~-~~~~~~~~~~~ 290 (414)
T KOG0531|consen 222 KLEGLNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLE--GLERLPKL-SELWLNDNKLA 290 (414)
T ss_pred eccCcccchhHHHHHHhcccCcccc-ccccccccccccccchhhccccccc--cccccchH-HHhccCcchhc
Confidence 7654322222248889999998873 3356677888889999998887322 12223333 45666666654
No 471
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.07 E-value=8.8e-10 Score=117.98 Aligned_cols=142 Identities=20% Similarity=0.246 Sum_probs=111.8
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCc-cchHHHHHHHHHHhccCC--CCcceEEeeeecCC---ceEEEEEecC
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDK-ISTGAFSSEIATLSRIRH--RNIVRLLGWGANRK---TKLLFYDYMP 855 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~---~~~lv~e~~~ 855 (1117)
+.|+.|.++.||++...+|+.+++|+...... .....+..|+++++.+++ ..+++++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999876678999999765432 134578999999999976 44677888766543 5689999999
Q ss_pred CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccC----------------------------------------
Q 001238 856 NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDC---------------------------------------- 895 (1117)
Q Consensus 856 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------- 895 (1117)
|.++.+.+.. +.++..+...++.++++++.+||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9988776532 23677788888999999999998531
Q ss_pred -------------CCceeeeccccCeEEEcC--CCcceecccccccc
Q 001238 896 -------------VPAILHRDVKSHNILLGE--RYESCLADFGLARL 927 (1117)
Q Consensus 896 -------------~~~ivHrDlkp~Nill~~--~~~~kl~DfGla~~ 927 (1117)
...++|+|++|.||++++ ++.+.++||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 56678999998864
No 472
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=1.3e-10 Score=132.84 Aligned_cols=246 Identities=20% Similarity=0.225 Sum_probs=173.0
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc--CCCcEEEEEEeecCCccchHHH--HHHHHHHhcc-CCCCcceEEeeeecCCceEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL--PSGLTVAVKRFRASDKISTGAF--SSEIATLSRI-RHRNIVRLLGWGANRKTKLL 849 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 849 (1117)
..+|..+..||.|.|+.|++... .++..|++|.....-....++. ..|+.+...+ .|.++++.+..+..-+..|+
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 45788889999999999999753 4578899998765433222222 3466666666 58999998888888888889
Q ss_pred EEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCC-Ccceeccccccccc
Q 001238 850 FYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGER-YESCLADFGLARLV 928 (1117)
Q Consensus 850 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfGla~~~ 928 (1117)
--||+++++......- ...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.+..+
T Consensus 344 p~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred chhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccccc
Confidence 9999999998766522 23478888999999999999999998 99999999999999886 77889999998643
Q ss_pred cCCCCCccccCCccccccccC--ChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCCCCCCCChhHHHHHHHHHhcCCCC
Q 001238 929 EDDSGGSFSANPQFAGSYGYI--APEYANMTKISEKSDVYSYGVVLLEIITGKKPVDASFPDGQHVIQWVRDHLKSKKDP 1006 (1117)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1117)
.... .....+-+++ +++......+-.++|+||||..+.|.+++..--.. . .+|... +
T Consensus 418 ~~~~-------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~----~---~~~~~i--~----- 476 (524)
T KOG0601|consen 418 AFSS-------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES----G---VQSLTI--R----- 476 (524)
T ss_pred ceec-------ccccccccccccchhhccccccccccccccccccccccccCcccCcc----c---ccceee--e-----
Confidence 2211 1112233344 55566667788999999999999999998653211 1 111110 0
Q ss_pred ccccCcccCCCCchhHHHHHHHHhHhhhccCCCCCCCCCHHHHHHHHHh
Q 001238 1007 VEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLRE 1055 (1117)
Q Consensus 1007 ~~~~~~~l~~~~~~~~~~~l~~~~i~~~C~~~~p~~RPs~~~v~~~L~~ 1055 (1117)
....+..++.. ...+.+.++ ...+++..||.+.++....+.
T Consensus 477 -~~~~p~~~~~~-~~~q~~~kv------~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 477 -SGDTPNLPGLK-LQLQVLLKV------MINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred -cccccCCCchH-Hhhhhhhhh------hcCCccccchhhhhhcccchh
Confidence 01112333333 345555555 677899999998887665443
No 473
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=8.6e-10 Score=107.88 Aligned_cols=132 Identities=23% Similarity=0.373 Sum_probs=101.9
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCC--------ccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEEEe
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASD--------KISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFYDY 853 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 853 (1117)
..+++|+=+.+|.+.+ -|.++++|.-.++. +-...+-.+|++++.+++--.|....=+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 3578999999999977 34456677543221 11123467799999999776666555566777888999999
Q ss_pred cCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccc
Q 001238 854 MPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLV 928 (1117)
Q Consensus 854 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 928 (1117)
++|..|.+.+... ...++..+-.-+.-||.. +|||+|+.++||++..++ +.++|||++...
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999999888754 245677788888999999 999999999999998875 889999999753
No 474
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.05 E-value=6.1e-11 Score=138.92 Aligned_cols=226 Identities=26% Similarity=0.300 Sum_probs=110.1
Q ss_pred CCCCCCCcEEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCCCcceEecccccccCcccccccCCCCCc
Q 001238 287 LGNLKNLVNLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLA 366 (1117)
Q Consensus 287 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 366 (1117)
+..+++|+.|++.+|+|..+ ...+..+++|++|||++|.|+... .+..++.|+.|++++|.|+. ...+..+..|+
T Consensus 91 l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~--~~~~~~l~~L~ 165 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISD--ISGLESLKSLK 165 (414)
T ss_pred cccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhheeccCcchh--ccCCccchhhh
Confidence 44444444444444444422 111444555555555555555321 23444445555555555542 12233345555
Q ss_pred EEEecCccccCCCC-cccccccchHHHHhccccccccCCCCCCcccccceeecccccccCCCcccccCCC--CCCeeecc
Q 001238 367 QIELDNNQITGAIP-SEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPRGIFQLK--KLNKLLLL 443 (1117)
Q Consensus 367 ~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~ 443 (1117)
.+++++|++....+ . ...+.+++.+++..|.+... ..+..+..+..+++..|.++..- .+..+. .|+.++++
T Consensus 166 ~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~--~l~~~~~~~L~~l~l~ 240 (414)
T KOG0531|consen 166 LLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLE--GLNELVMLHLRELYLS 240 (414)
T ss_pred cccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccceecc--CcccchhHHHHHHhcc
Confidence 55555555553332 1 34455555555555555421 22333344444455555555211 122222 25566666
Q ss_pred CccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCCC---CCcc-cccCCCCceEEccCCcc
Q 001238 444 SNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGS---IPDE-ITGCRNLTFLDVHSNSI 519 (1117)
Q Consensus 444 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~-~~~l~~L~~L~Ls~N~l 519 (1117)
+|.+... +..+..+..+..|++.+|++... ..+.....+..+.+..|.+... .... ....+.++.+.+..|.+
T Consensus 241 ~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
T KOG0531|consen 241 GNRISRS-PEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPI 317 (414)
T ss_pred cCccccc-cccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcc
Confidence 6665522 24455556666666666666533 2244445566666666665421 1111 34556777777777777
Q ss_pred ccccch
Q 001238 520 AGNLPA 525 (1117)
Q Consensus 520 ~~~~~~ 525 (1117)
....+.
T Consensus 318 ~~~~~~ 323 (414)
T KOG0531|consen 318 RKISSL 323 (414)
T ss_pred cccccc
Confidence 765443
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=3.1e-11 Score=124.01 Aligned_cols=131 Identities=25% Similarity=0.252 Sum_probs=68.7
Q ss_pred ccccceeecccccccCCCcccccCCCCCCeeeccCccCCCCCCCCcccccccceeccCCCcccccCCCCcCCCCCCCEEE
Q 001238 410 CQNLEAVDLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRFRANSNKLTGFIPPEIGNLKNLNFLD 489 (1117)
Q Consensus 410 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 489 (1117)
++.|++||||+|.|+ .+..+..-+++++.|++++|.|..+ +.+..+++|+.|||++|.++ .+..+-..+-+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 344445555555544 2444444444555555555555432 22445555555555555555 2233444455666666
Q ss_pred ccCCcCCCCCCcccccCCCCceEEccCCcccccc-chhhhcccccccccccCCcCCCC
Q 001238 490 LGSNRLTGSIPDEITGCRNLTFLDVHSNSIAGNL-PAGLHQLVRLQFADLSDNSVGGM 546 (1117)
Q Consensus 490 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~i~~~ 546 (1117)
|+.|.|... ..+..+-+|..||+++|+|.... -..++.++-|+.+.|.+|.+..+
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 666666422 33455556666666666665321 12456666666666666666654
No 476
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.03 E-value=8.8e-11 Score=146.14 Aligned_cols=231 Identities=23% Similarity=0.245 Sum_probs=103.0
Q ss_pred hhhhhhhhhhhccCCCcCCCCchhccCCcCCcEEeccCCCCCCCCcccccCcccchhhhccCCCCCCCCCCccccccccc
Q 001238 142 LCSLLRLEQLRLNSNQLEGAIPIQIGNLSSLTQLFLYDNQLTDAIPATIGKLKNLEAIRAGGNKNLGGSLPHEIGNCTNL 221 (1117)
Q Consensus 142 ~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L 221 (1117)
|..++.|++|||++|.=-+.+|.+|++|-+||+|+|++..++ .+|..+++|++|.+|++..+..+. .+|.-+..+++|
T Consensus 567 f~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~-~~~~i~~~L~~L 644 (889)
T KOG4658|consen 567 FRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLE-SIPGILLELQSL 644 (889)
T ss_pred HhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccc-cccchhhhcccc
Confidence 333444444444444433344444444444444444444444 344444444444444444443322 113333334444
Q ss_pred ccccccccc--ccccCCcccccccccceeecccccccccCCcCCCCCCCCc----EEecCCCccCCcCCccCCCCCCCcE
Q 001238 222 VMIGLAETS--ISGFLPPTLGLLKRLQTIAIYTALLSGQIPPELGDCTELQ----YIYLYENALTGSIPSKLGNLKNLVN 295 (1117)
Q Consensus 222 ~~L~l~~~~--~~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~l~~l~~L~~ 295 (1117)
++|.+.... .....-..+.+|.+|+.+.+..... .+-..+..++.|. .+.+.++... ..+..++.+.+|+.
T Consensus 645 r~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~ 721 (889)
T KOG4658|consen 645 RVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEE 721 (889)
T ss_pred cEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcce
Confidence 444443322 1112223334444444444433222 1112222333332 3333333333 45566777788888
Q ss_pred EEccCCcCcccCCcCCCCC------CCCCEEEcCCCcCCCCCccccCCCCCcceEecccccccCcccccccCCCCCcEEE
Q 001238 296 LFLWQNNLVGIIPPELGNC------SQLSIIDISMNSLTGSIPQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIE 369 (1117)
Q Consensus 296 L~L~~n~l~~~~p~~~~~l------~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 369 (1117)
|.+.++.+........... +++..+...++... ..+.+.-..++|+.|++..+.....+......+..++.+.
T Consensus 722 L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i 800 (889)
T KOG4658|consen 722 LSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELI 800 (889)
T ss_pred EEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEE
Confidence 8888777764333222111 12222222222211 1222233446777777777766555555555555566555
Q ss_pred ecCccccCC
Q 001238 370 LDNNQITGA 378 (1117)
Q Consensus 370 L~~N~l~~~ 378 (1117)
+..+.+.+.
T Consensus 801 ~~f~~~~~l 809 (889)
T KOG4658|consen 801 LPFNKLEGL 809 (889)
T ss_pred ecccccccc
Confidence 555555544
No 477
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.03 E-value=6.4e-11 Score=147.33 Aligned_cols=280 Identities=20% Similarity=0.212 Sum_probs=180.4
Q ss_pred chhhhcccccCcEeeccCCCcCCCCchhhhhhhhhhhhhccCCC--cCCCCchhccCCcCCcEEeccCCCCCCCCccccc
Q 001238 114 IPKEIASLNQLNYLDLSENSLTGEIPRELCSLLRLEQLRLNSNQ--LEGAIPIQIGNLSSLTQLFLYDNQLTDAIPATIG 191 (1117)
Q Consensus 114 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~ 191 (1117)
+|+ ..+....+...+-+|.+. .++.... .++|++|-+..|. +.-..+..|..++.|++|||++|.=-+.+|..++
T Consensus 516 ~~~-~~~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~ 592 (889)
T KOG4658|consen 516 IPQ-VKSWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIG 592 (889)
T ss_pred ccc-ccchhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHh
Confidence 443 344467788888888775 4544433 3368888888886 5533445578899999999999988889999999
Q ss_pred CcccchhhhccCCCCCCCCCCccccccccccccccccccccccCCcccccccccceeeccccc--ccccCCcCCCCCCCC
Q 001238 192 KLKNLEAIRAGGNKNLGGSLPHEIGNCTNLVMIGLAETSISGFLPPTLGLLKRLQTIAIYTAL--LSGQIPPELGDCTEL 269 (1117)
Q Consensus 192 ~l~~L~~L~l~~n~~~~~~lp~~l~~l~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~l~~~~--l~~~~p~~l~~l~~L 269 (1117)
.|-+|++|++++... ..+|..+++++.|.+|++..+.....+|.....|.+|++|.+.... .....-.++..+.+|
T Consensus 593 ~Li~LryL~L~~t~I--~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L 670 (889)
T KOG4658|consen 593 ELVHLRYLDLSDTGI--SHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHL 670 (889)
T ss_pred hhhhhhcccccCCCc--cccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccch
Confidence 999999999999875 4899999999999999999998877778888889999999997654 222334455666667
Q ss_pred cEEecCCCccCCcCCccCCCCCCCc----EEEccCCcCcccCCcCCCCCCCCCEEEcCCCcCCCCCccccCCCC------
Q 001238 270 QYIYLYENALTGSIPSKLGNLKNLV----NLFLWQNNLVGIIPPELGNCSQLSIIDISMNSLTGSIPQTLGNLT------ 339 (1117)
Q Consensus 270 ~~L~L~~n~l~~~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~------ 339 (1117)
+.|....... .+-..+..+..|. .+.+.++... ..+..+..+.+|+.|.+.++.+............
T Consensus 671 ~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~ 747 (889)
T KOG4658|consen 671 ENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFP 747 (889)
T ss_pred hhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHH
Confidence 6666644333 1112233444443 3343333333 4556778889999999999888743332222211
Q ss_pred CcceEecccccccCcccccccCCCCCcEEEecCccccCCCCcccccccchHHHHhcccccccc
Q 001238 340 SLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGE 402 (1117)
Q Consensus 340 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 402 (1117)
++..+...++..- ..+.+..-.++|+.|++..+.....+.+....+..+..+.+..+.+.+.
T Consensus 748 ~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 748 NLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred HHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 2222222222111 1122223456777777777765544444444444454444555555443
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=1.7e-10 Score=115.50 Aligned_cols=122 Identities=30% Similarity=0.397 Sum_probs=39.2
Q ss_pred CCceEEccCCccccccchhhh-cccccccccccCCcCCCCCCCCcCCCccccEEeccccccCCCCCcccccccceeEEec
Q 001238 508 NLTFLDVHSNSIAGNLPAGLH-QLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDL 586 (1117)
Q Consensus 508 ~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 586 (1117)
++++|+|++|.|+.+ +.+. .+.+|+.|||++|.|+.+. .+..++.|++|++++|+|+...+.....+++|+.|+|
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 344444444444422 1222 2344444444444444442 2445566666666666666432221234667777777
Q ss_pred cccccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEeccCccccCCcch----hhhcccceEEE
Q 001238 587 SSNQLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDLSHNELSGDLHF----LAELQNLVVLN 657 (1117)
Q Consensus 587 s~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~~~~~----l~~l~~L~~L~ 657 (1117)
++|+|.. +..+ ..+..+++|+.|+|.+|+++..... +..+|+|+.||
T Consensus 96 ~~N~I~~-----l~~l-------------------~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 96 SNNKISD-----LNEL-------------------EPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp TTS---S-----CCCC-------------------GGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred cCCcCCC-----hHHh-------------------HHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 7777751 1111 2345678888888888888765432 67788888887
No 479
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=6.1e-11 Score=128.61 Aligned_cols=192 Identities=21% Similarity=0.233 Sum_probs=98.6
Q ss_pred CCCCCCCCEEEcCCCcCCCCC--ccccCCCCCcceEecccccccCccccc-ccCCCCCcEEEecCccccCCC-Ccccccc
Q 001238 311 LGNCSQLSIIDISMNSLTGSI--PQTLGNLTSLQELQLSVNQISGEIPAQ-IGNCQRLAQIELDNNQITGAI-PSEFGNL 386 (1117)
Q Consensus 311 ~~~l~~L~~LdLs~N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~-p~~~~~l 386 (1117)
...|++++.||||.|-+..-. -.....|++|+.|+|+.|.+....... -..++.|+.|.|+.|.++... ......+
T Consensus 142 ~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~f 221 (505)
T KOG3207|consen 142 SKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTF 221 (505)
T ss_pred hhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhC
Confidence 344555566666655554221 122344566666666666654222111 124566777777777766221 1123446
Q ss_pred cchHHHHhccccccccCCCCCCcccccceeecccccccCCCc--ccccCCCCCCeeeccCccCCCCCCCCccccccccee
Q 001238 387 SNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIP--RGIFQLKKLNKLLLLSNNLSGVIPPEMGNCSSLIRF 464 (1117)
Q Consensus 387 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 464 (1117)
|+|..|+|..|............++.|+.|||++|++-. .+ .....++.|+.|+++.+.+..+--..-.
T Consensus 222 Psl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~-------- 292 (505)
T KOG3207|consen 222 PSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVE-------- 292 (505)
T ss_pred CcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcchhcCCCcc--------
Confidence 777777777775332333344456677777777777652 33 2344566666666666666543111110
Q ss_pred ccCCCcccccCCCCcCCCCCCCEEEccCCcCCC-CCCcccccCCCCceEEccCCcccc
Q 001238 465 RANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTG-SIPDEITGCRNLTFLDVHSNSIAG 521 (1117)
Q Consensus 465 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~ 521 (1117)
.-.-...+++|++|+++.|++.. ..-+.+..+++|+.|....|.+..
T Consensus 293 ----------s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 293 ----------SLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ----------chhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 00011234556666666666632 111234445566666666666653
No 480
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=2.5e-10 Score=114.29 Aligned_cols=125 Identities=28% Similarity=0.351 Sum_probs=41.8
Q ss_pred cccccceeccCCCcccccCCCCcC-CCCCCCEEEccCCcCCCCCCcccccCCCCceEEccCCccccccchhh-hcccccc
Q 001238 457 NCSSLIRFRANSNKLTGFIPPEIG-NLKNLNFLDLGSNRLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGL-HQLVRLQ 534 (1117)
Q Consensus 457 ~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~ 534 (1117)
+...+++|+|.+|+|+.+ +.++ .+.+|+.|+|++|.|+.. ..+..++.|++|++++|+|+... ..+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~-~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSIS-EGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-C-HHHHHH-TT--
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccc-cchHHhCCcCC
Confidence 334455566666665532 2343 356666777777776633 24556667777777777776432 233 3466777
Q ss_pred cccccCCcCCCCCC-CCcCCCccccEEeccccccCCCC---CcccccccceeEEec
Q 001238 535 FADLSDNSVGGMLS-PDLGSLSSLTKLVLNKNRFAGSI---PSQLGSCVKLQLLDL 586 (1117)
Q Consensus 535 ~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~L 586 (1117)
.|++++|+|.++.. ..+..+++|+.|+|.+|.++... ...+..+++|+.||-
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 77777777766543 34566777888888888777431 113456777888774
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.98 E-value=3.1e-09 Score=103.11 Aligned_cols=143 Identities=21% Similarity=0.238 Sum_probs=106.9
Q ss_pred CCCeeeecCCeEEEEEEcCCCcEEEEEEeecC--------CccchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEEE
Q 001238 780 AGNIIGQGRSGIVYKVTLPSGLTVAVKRFRAS--------DKISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLFY 851 (1117)
Q Consensus 780 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 851 (1117)
....+-+|+-+.|+++.+ .|+.+.||.-... .+-..++..+|++.+.+++--.|.-..=++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 457889999999999988 6778777743221 1223456788999999987666654444566667778999
Q ss_pred EecCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCC---cceecccccccc
Q 001238 852 DYMPN-GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERY---ESCLADFGLARL 927 (1117)
Q Consensus 852 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~---~~kl~DfGla~~ 927 (1117)
||++| .++.+++....... .+......++..|-+.+.-||.. +|+|+|+..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 47777776643322 22333367899999999999999 999999999999997654 347999999864
No 482
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.97 E-value=3e-11 Score=127.73 Aligned_cols=133 Identities=25% Similarity=0.320 Sum_probs=89.8
Q ss_pred cccccccccCCcCCCCCC----CCcCCCccccEEeccccccCCC----CCcccccccceeEEeccccccccc----cccc
Q 001238 531 VRLQFADLSDNSVGGMLS----PDLGSLSSLTKLVLNKNRFAGS----IPSQLGSCVKLQLLDLSSNQLSGN----IPAS 598 (1117)
Q Consensus 531 ~~L~~L~Ls~N~i~~~~~----~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 598 (1117)
+.|+++....|++.+-.. ..|...+.|+.+.+..|.|... ...+|..++.|+.|||..|-|+.. +...
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka 236 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA 236 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH
Confidence 456666666666654433 2344556677777777766522 234567778888888888877733 3344
Q ss_pred cCCchhHHHhhcCCCCcccCCcccc----c-cCCCCccEEeccCccccCCcc-----hhhhcccceEEEeeccccc
Q 001238 599 LGKIPALAIALNLSWNQICGELPAE----L-TGLNKLGILDLSHNELSGDLH-----FLAELQNLVVLNVSHNNFS 664 (1117)
Q Consensus 599 l~~l~~l~~~L~Ls~N~l~~~~p~~----l-~~l~~L~~LdLs~N~l~~~~~-----~l~~l~~L~~L~ls~N~l~ 664 (1117)
+..++++ ++|++++|.+...-... + ...++|++|+|.+|.++.+-. .....+.|..|+|++|+|.
T Consensus 237 L~s~~~L-~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 237 LSSWPHL-RELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred hcccchh-eeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 5566766 67888888886643333 2 346899999999999986432 2667899999999999994
No 483
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=9.9e-11 Score=127.00 Aligned_cols=214 Identities=21% Similarity=0.179 Sum_probs=117.0
Q ss_pred cccccceeecccccccccCC--cCCCCCCCCcEEecCCCccCCcCC--ccCCCCCCCcEEEccCCcCcccCCcCC-CCCC
Q 001238 241 LLKRLQTIAIYTALLSGQIP--PELGDCTELQYIYLYENALTGSIP--SKLGNLKNLVNLFLWQNNLVGIIPPEL-GNCS 315 (1117)
Q Consensus 241 ~l~~L~~L~l~~~~l~~~~p--~~l~~l~~L~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~ 315 (1117)
++.+|+...+.++.... .+ .....|++++.|+|+.|-+....| .-...|++|+.|+|+.|++........ ..++
T Consensus 119 n~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 34444444444443321 11 355677888888888887764322 334567888888888888763332221 2467
Q ss_pred CCCEEEcCCCcCCCCC-ccccCCCCCcceEecccccccCcccccccCCCCCcEEEecCccccCCCC-cccccccchHHHH
Q 001238 316 QLSIIDISMNSLTGSI-PQTLGNLTSLQELQLSVNQISGEIPAQIGNCQRLAQIELDNNQITGAIP-SEFGNLSNLTLLF 393 (1117)
Q Consensus 316 ~L~~LdLs~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ 393 (1117)
+|+.|.|+.|.++..- -..+..+|+|+.|+|..|............+..|++|+|++|++-...- ...+.++.|..|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 7778888887777321 1223456777778887775333334444456667777777777652211 2345666677777
Q ss_pred hccccccccCCCCCCcccccceeecccccccCCCcccccCCCCCCeeeccCccCCCC-CCCCcccccccceeccCCCccc
Q 001238 394 VWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGPIPRGIFQLKKLNKLLLLSNNLSGV-IPPEMGNCSSLIRFRANSNKLT 472 (1117)
Q Consensus 394 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~ 472 (1117)
++.|.+...--... ..+ .-...+++|++|++..|+|..- .-..+..+++|+.|....|.++
T Consensus 278 ls~tgi~si~~~d~------~s~------------~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDV------ESL------------DKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCc------cch------------hhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 77766653321111 000 0012244555555555555321 0122334556666666667665
Q ss_pred c
Q 001238 473 G 473 (1117)
Q Consensus 473 ~ 473 (1117)
.
T Consensus 340 ~ 340 (505)
T KOG3207|consen 340 K 340 (505)
T ss_pred c
Confidence 3
No 484
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.93 E-value=1.5e-10 Score=122.61 Aligned_cols=224 Identities=20% Similarity=0.224 Sum_probs=124.2
Q ss_pred cCCCCCCCcEEEccCCcCccc----CCcCCCCCCCCCEEEcCCCcC---CCCCcc-------ccCCCCCcceEecccccc
Q 001238 286 KLGNLKNLVNLFLWQNNLVGI----IPPELGNCSQLSIIDISMNSL---TGSIPQ-------TLGNLTSLQELQLSVNQI 351 (1117)
Q Consensus 286 ~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~LdLs~N~l---~~~~p~-------~l~~l~~L~~L~Ls~N~l 351 (1117)
.+..+..++.++|++|.+... +...+.+.++|+..++|.=.. ...+|. .+-..++|++|+||.|.|
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 345566777888888877532 233455667777777765321 122332 233345677777777766
Q ss_pred cCccccc----ccCCCCCcEEEecCccccCCCCcccccccchHHHHhccccccccCCCCCCcccccceeecccccccCC-
Q 001238 352 SGEIPAQ----IGNCQRLAQIELDNNQITGAIPSEFGNLSNLTLLFVWHNRLEGEIPPSISNCQNLEAVDLSQNGLTGP- 426 (1117)
Q Consensus 352 ~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 426 (1117)
.-..+.. +.++..|++|.|.||.+.-.-...++ ..|..|. .|+. ...-+.|+++...+|++...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen~g 173 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNKK-------AASKPKLRVFICGRNRLENGG 173 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHhc-------cCCCcceEEEEeecccccccc
Confidence 5333332 23455666666666655421111111 1234333 2221 23346789999999988642
Q ss_pred ---CcccccCCCCCCeeeccCccCCCCC----CCCcccccccceeccCCCccccc----CCCCcCCCCCCCEEEccCCcC
Q 001238 427 ---IPRGIFQLKKLNKLLLLSNNLSGVI----PPEMGNCSSLIRFRANSNKLTGF----IPPEIGNLKNLNFLDLGSNRL 495 (1117)
Q Consensus 427 ---~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l 495 (1117)
+...|...+.|+.+.++.|.|.... ...|..|++|+.|||..|.++.. +...+..+++|++|++++|.+
T Consensus 174 a~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll 253 (382)
T KOG1909|consen 174 ATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLL 253 (382)
T ss_pred HHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccc
Confidence 2233445678888888888876321 12455667777777777766532 223455556666777777666
Q ss_pred CCCCCcccc-----cCCCCceEEccCCccc
Q 001238 496 TGSIPDEIT-----GCRNLTFLDVHSNSIA 520 (1117)
Q Consensus 496 ~~~~p~~~~-----~l~~L~~L~Ls~N~l~ 520 (1117)
...-..+|. ..++|+.|.|.+|.|+
T Consensus 254 ~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 254 ENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred ccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 543333321 2456666666666665
No 485
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.88 E-value=1.2e-08 Score=104.08 Aligned_cols=126 Identities=24% Similarity=0.309 Sum_probs=84.3
Q ss_pred EEEEEEcCCCcEEEEEEeecCC-------------cc--------c-----hHHHHHHHHHHhccCCC--CcceEEeeee
Q 001238 791 IVYKVTLPSGLTVAVKRFRASD-------------KI--------S-----TGAFSSEIATLSRIRHR--NIVRLLGWGA 842 (1117)
Q Consensus 791 ~Vy~~~~~~~~~vavK~~~~~~-------------~~--------~-----~~~~~~E~~~l~~l~H~--niv~l~~~~~ 842 (1117)
.||.|...+|..||||+.+... .. . ....++|++.|.++... ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998899999999885420 00 0 12357799999999765 567777653
Q ss_pred cCCceEEEEEecC--CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHH-HhccCCCceeeeccccCeEEEcCCCccee
Q 001238 843 NRKTKLLFYDYMP--NGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSY-LHHDCVPAILHRDVKSHNILLGERYESCL 919 (1117)
Q Consensus 843 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivHrDlkp~Nill~~~~~~kl 919 (1117)
..++||||++ |..+..+.... ++......++.+++..+.. +|.. ||||+|+.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 3479999998 65555443322 1123455677788886666 4677 99999999999999988 9999
Q ss_pred cccccccccc
Q 001238 920 ADFGLARLVE 929 (1117)
Q Consensus 920 ~DfGla~~~~ 929 (1117)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999987654
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.85 E-value=1.5e-09 Score=129.88 Aligned_cols=205 Identities=23% Similarity=0.244 Sum_probs=147.2
Q ss_pred ccCCCCCCeeeecCCeEEEEEEc-CCCcEEEEEEeecCCc---cchHHHHHHHHHHhccCCCCcceEEeeeecCCceEEE
Q 001238 775 TRSLTAGNIIGQGRSGIVYKVTL-PSGLTVAVKRFRASDK---ISTGAFSSEIATLSRIRHRNIVRLLGWGANRKTKLLF 850 (1117)
Q Consensus 775 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 850 (1117)
.+.+.+.+.+-.|.++.++.++- ..|-..++|+...... ...+...++-.+.-..+||-+++...-+.-....++|
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 45677778889999999998753 2343444444332211 1112222232333333456666665555567788999
Q ss_pred EEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 851 YDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 851 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
++|..++++...++... ..+.+.+......+..+.+|||.. .+.|||++|.|.+...+++.+++|||.......
T Consensus 883 ~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 99999999999888753 355666677778889999999998 799999999999999999999999984432221
Q ss_pred CCC---------------------------CccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCCCCC
Q 001238 931 DSG---------------------------GSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKKPVD 983 (1117)
Q Consensus 931 ~~~---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~P~~ 983 (1117)
... ..........||+.|.+||...+......+|.|+.|++++|.++|.+||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 100 00012334679999999999999999999999999999999999999997
Q ss_pred CC
Q 001238 984 AS 985 (1117)
Q Consensus 984 ~~ 985 (1117)
..
T Consensus 1037 a~ 1038 (1205)
T KOG0606|consen 1037 AE 1038 (1205)
T ss_pred Cc
Confidence 64
No 487
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.81 E-value=3.3e-09 Score=79.75 Aligned_cols=40 Identities=40% Similarity=0.962 Sum_probs=29.8
Q ss_pred hhHHHHHHHHHhhccC-CCCCCCCCCCCC-CCCcceeeEEec
Q 001238 32 NRQGEALLSWKRNWKG-SDDGLSNWSPSD-ETPCKWFGVSCN 71 (1117)
Q Consensus 32 ~~~~~aLl~~k~~~~~-~~~~l~sW~~~~-~~~C~W~gv~C~ 71 (1117)
+.|++||++||+++.+ +...+++|+... .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 5799999999999985 446799999764 789999999996
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.78 E-value=5.4e-08 Score=105.51 Aligned_cols=141 Identities=15% Similarity=0.157 Sum_probs=100.8
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCcc-----------chHHHHHHHHHHhccCCCCc--ceEEeeeec-----
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKI-----------STGAFSSEIATLSRIRHRNI--VRLLGWGAN----- 843 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~----- 843 (1117)
+.+-+.....|+++.. +|+.|.||+....... ....+.+|.+.+.++...+| ++.++++..
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444445667766 6788999977543211 11147899999988854443 344555543
Q ss_pred CCceEEEEEecCCC-ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC-------CC
Q 001238 844 RKTKLLFYDYMPNG-TLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE-------RY 915 (1117)
Q Consensus 844 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-------~~ 915 (1117)
....++|||++++. +|.+++.... ....+...+..++.+++..+.-||.. ||+|+|++++|||++. +.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 23468999999986 8988875421 12255677788999999999999999 9999999999999985 46
Q ss_pred cceecccccccc
Q 001238 916 ESCLADFGLARL 927 (1117)
Q Consensus 916 ~~kl~DfGla~~ 927 (1117)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 789999998864
No 489
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.76 E-value=3.3e-07 Score=99.66 Aligned_cols=195 Identities=16% Similarity=0.271 Sum_probs=129.3
Q ss_pred CCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhcc-CCCCcceEEe------eeecCCc-eEE
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRI-RHRNIVRLLG------WGANRKT-KLL 849 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~------~~~~~~~-~~l 849 (1117)
...++.||+|+-+.+|-... -+..+-|++.........+ -++.|.+. .||-+-.-+. ++.++.. ..+
T Consensus 13 i~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred cCCCccccCCccceeeecch--hhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 34567899999999997432 1234557776543322222 23333343 5664433121 1223333 567
Q ss_pred EEEecCCCC-hhhhhc---CCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceecccccc
Q 001238 850 FYDYMPNGT-LGMLLH---DGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLA 925 (1117)
Q Consensus 850 v~e~~~~gs-L~~~l~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 925 (1117)
.|..+++.- ..++.. +........|.-.+++++.+|.+.+.||.. |.+-+|+.++|+|+++++.+.+.|-.--
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 888877642 222221 122223478999999999999999999999 9999999999999999999999874322
Q ss_pred ccccCCCCCccccCCccccccccCChhhhc-----cCCCCcCCCeeehhhhHHHHHhC-CCCCCCC
Q 001238 926 RLVEDDSGGSFSANPQFAGSYGYIAPEYAN-----MTKISEKSDVYSYGVVLLEIITG-KKPVDAS 985 (1117)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~vl~ell~g-~~P~~~~ 985 (1117)
..... + ......+|...|.+||.-. +...+...|-|.+||++++++.| +.||.+.
T Consensus 165 qi~~n---g--~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 165 QINAN---G--TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred eeccC---C--ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 22111 1 1222347889999999654 34557789999999999999996 9999764
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.69 E-value=8.6e-08 Score=99.70 Aligned_cols=136 Identities=24% Similarity=0.309 Sum_probs=97.9
Q ss_pred CCCCCeeeecCCeEEEEEEcCCCcEEEEEEeecCC----------------------ccchHHHHHHHHHHhccCCC--C
Q 001238 778 LTAGNIIGQGRSGIVYKVTLPSGLTVAVKRFRASD----------------------KISTGAFSSEIATLSRIRHR--N 833 (1117)
Q Consensus 778 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~~~l~~l~H~--n 833 (1117)
..++.+||.|.=+.||.|..++|.++|||.-+... ..+....++|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45678899999999999999999999999543210 01122457899999999654 7
Q ss_pred cceEEeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcC
Q 001238 834 IVRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGE 913 (1117)
Q Consensus 834 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~ 913 (1117)
+++.+++ +...+||||++|-.|...-- +.+..-.++..|++-+..+-.. ||||+|+.+-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 7777765 44579999999866654321 1222233444444444444455 9999999999999999
Q ss_pred CCcceeccccccccc
Q 001238 914 RYESCLADFGLARLV 928 (1117)
Q Consensus 914 ~~~~kl~DfGla~~~ 928 (1117)
+|.+.++||--+...
T Consensus 238 dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 238 DGDIVVIDWPQAVPI 252 (304)
T ss_pred CCCEEEEeCcccccC
Confidence 999999999766544
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.62 E-value=2.3e-08 Score=82.30 Aligned_cols=58 Identities=40% Similarity=0.568 Sum_probs=24.0
Q ss_pred cceeccCCCcccccCCCCcCCCCCCCEEEccCCcCCCCCCcccccCCCCceEEccCCc
Q 001238 461 LIRFRANSNKLTGFIPPEIGNLKNLNFLDLGSNRLTGSIPDEITGCRNLTFLDVHSNS 518 (1117)
Q Consensus 461 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 518 (1117)
|++|++++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 3334444444443333344444444444444444443333444444444444444443
No 492
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.61 E-value=2.4e-08 Score=82.19 Aligned_cols=15 Identities=40% Similarity=0.576 Sum_probs=5.4
Q ss_pred cccccceeEEecccc
Q 001238 575 LGSCVKLQLLDLSSN 589 (1117)
Q Consensus 575 ~~~l~~L~~L~Ls~N 589 (1117)
|..+++|+.|++++|
T Consensus 45 f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 45 FSNLPNLRYLDLSNN 59 (61)
T ss_dssp TTTSTTESEEEETSS
T ss_pred HcCCCCCCEEeCcCC
Confidence 333333333333333
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.58 E-value=2.4e-09 Score=122.54 Aligned_cols=127 Identities=26% Similarity=0.269 Sum_probs=96.5
Q ss_pred CCCEEEccCCcCCCCCCcccccCCCCceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCCCccccEEecc
Q 001238 484 NLNFLDLGSNRLTGSIPDEITGCRNLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLN 563 (1117)
Q Consensus 484 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~ 563 (1117)
.|...+.++|++. ....++.-++.|+.|||++|+++... .+..++.|++|||++|.+..++.....++. |..|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 4788899999998 66777888899999999999998653 788999999999999999988776666665 9999999
Q ss_pred ccccCCCCCcccccccceeEEeccccccccccc-cccCCchhHHHhhcCCCCccc
Q 001238 564 KNRFAGSIPSQLGSCVKLQLLDLSSNQLSGNIP-ASLGKIPALAIALNLSWNQIC 617 (1117)
Q Consensus 564 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~l~~~L~Ls~N~l~ 617 (1117)
||.++.. ..+.++.+|+.||||+|-|.+.-. .-++.+..| +.|+|.||.+.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L-~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSL-IVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHH-HHHhhcCCccc
Confidence 9998742 346788899999999999884321 112223333 45555555554
No 494
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.52 E-value=5.2e-07 Score=100.87 Aligned_cols=167 Identities=20% Similarity=0.273 Sum_probs=125.3
Q ss_pred eEEEEEE-cCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCCcceEEeeeec----CCceEEEEEecCC-CChhhhh
Q 001238 790 GIVYKVT-LPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRNIVRLLGWGAN----RKTKLLFYDYMPN-GTLGMLL 863 (1117)
Q Consensus 790 g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~~~l 863 (1117)
.+.|++. ..||..|++|++..........-..-+++++++.|+|||++.+++.. +...++||+|.|+ ++|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 4678886 45899999999955443333334456889999999999999998763 3457899999986 5666544
Q ss_pred cCCC------------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCcceeccccccccccCC
Q 001238 864 HDGE------------CAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYESCLADFGLARLVEDD 931 (1117)
Q Consensus 864 ~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 931 (1117)
.... .....+++..|.++.|+..||.++|+. |+.-+-+.|.+|+++++.+++|+..|+...+..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 3221 122367889999999999999999999 9999999999999999999999888887665432
Q ss_pred CCCccccCCccccccccCChhhhccCCCCcCCCeeehhhhHHHHHhCCC
Q 001238 932 SGGSFSANPQFAGSYGYIAPEYANMTKISEKSDVYSYGVVLLEIITGKK 980 (1117)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~vl~ell~g~~ 980 (1117)
... .-|. -.+-|.=.+|.++..|.||..
T Consensus 447 ~~~---------------~le~------~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 447 PTE---------------PLES------QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCc---------------chhH------HhhhhHHHHHHHHHHHhhccc
Confidence 200 0011 135677789999999999954
No 495
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.45 E-value=5e-07 Score=105.97 Aligned_cols=141 Identities=21% Similarity=0.256 Sum_probs=94.5
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCccch------------------------------H----------HHHH
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKIST------------------------------G----------AFSS 821 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~------------------------------~----------~~~~ 821 (1117)
+.|+.++-|.||+|++++|+.||||+.++.-.... + .+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999999999998865311000 0 1445
Q ss_pred HHHHHhccC-----CCCcceEEeeeecCCceEEEEEecCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHH-HHHHhccC
Q 001238 822 EIATLSRIR-----HRNIVRLLGWGANRKTKLLFYDYMPNGTLGMLLHDGECAGLLEWDTRFKIALGVAEG-LSYLHHDC 895 (1117)
Q Consensus 822 E~~~l~~l~-----H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~-L~~LH~~~ 895 (1117)
|+..+.+++ .|.+.-..=|..-.....++|||++|-.+.+...-.. .+ .+... ++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g-~d~k~---ia~~~~~~f~~q~~~d- 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AG-IDRKE---LAELLVRAFLRQLLRD- 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cC-CCHHH---HHHHHHHHHHHHHHhc-
Confidence 666665552 2333211112333466799999999999888743322 12 44322 33333332 2233334
Q ss_pred CCceeeeccccCeEEEcCCCcceeccccccccccC
Q 001238 896 VPAILHRDVKSHNILLGERYESCLADFGLARLVED 930 (1117)
Q Consensus 896 ~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 930 (1117)
|+.|.|..|.||+++.+|++.+.|||+...+.+
T Consensus 285 --gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 --GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred --CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999987754
No 496
>PRK09902 hypothetical protein; Provisional
Probab=98.42 E-value=2.9e-06 Score=86.92 Aligned_cols=140 Identities=14% Similarity=0.083 Sum_probs=102.9
Q ss_pred eeecCCeEEEEEEcCCCcEEEEEEeecC-----C-ccchHHHHHHHHHHhccCCC--CcceEEeeeec--C--CceEEEE
Q 001238 784 IGQGRSGIVYKVTLPSGLTVAVKRFRAS-----D-KISTGAFSSEIATLSRIRHR--NIVRLLGWGAN--R--KTKLLFY 851 (1117)
Q Consensus 784 lg~G~fg~Vy~~~~~~~~~vavK~~~~~-----~-~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~--~--~~~~lv~ 851 (1117)
-|+||-+.|++... +|..+-+|+-... . +.....|.+|+..+.++..- .+++...+... + ...++|+
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 36689999999876 4447888876421 1 23456799999999999533 34555522222 1 2357999
Q ss_pred EecCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceeeeccccCeEEEcCCCc--ceeccccccccc
Q 001238 852 DYMPN-GTLGMLLHDGECAGLLEWDTRFKIALGVAEGLSYLHHDCVPAILHRDVKSHNILLGERYE--SCLADFGLARLV 928 (1117)
Q Consensus 852 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~--~kl~DfGla~~~ 928 (1117)
|-+++ -+|.+++..... ...+...+..+..+++..++-||+. |+.|+|+.+.||+++.++. ++++||--++..
T Consensus 105 e~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 105 EDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred EeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 97754 588888865432 2367788889999999999999999 9999999999999986666 899999877643
No 497
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.42 E-value=1.2e-06 Score=92.01 Aligned_cols=107 Identities=25% Similarity=0.336 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHhccCCCC--cceEEeeeecCC----ceEEEEEecCCC-ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHH
Q 001238 816 TGAFSSEIATLSRIRHRN--IVRLLGWGANRK----TKLLFYDYMPNG-TLGMLLHDGECAGLLEWDTRFKIALGVAEGL 888 (1117)
Q Consensus 816 ~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L 888 (1117)
..+..+|.+.+.++...+ +++.+++..... ..++|+|++++. +|.+++..... .+......++.++++.+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence 446788999988885443 456666665432 348999999884 79998876322 45667788999999999
Q ss_pred HHHhccCCCceeeeccccCeEEEcCCC---cceeccccccccc
Q 001238 889 SYLHHDCVPAILHRDVKSHNILLGERY---ESCLADFGLARLV 928 (1117)
Q Consensus 889 ~~LH~~~~~~ivHrDlkp~Nill~~~~---~~kl~DfGla~~~ 928 (1117)
+-||+. ||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 132 ~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 132 AKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999 999999999999999887 8899999988754
No 498
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.41 E-value=7.1e-09 Score=118.75 Aligned_cols=127 Identities=30% Similarity=0.308 Sum_probs=68.8
Q ss_pred CCceEEccCCccccccchhhhcccccccccccCCcCCCCCCCCcCCCccccEEeccccccCCCCCcccccccceeEEecc
Q 001238 508 NLTFLDVHSNSIAGNLPAGLHQLVRLQFADLSDNSVGGMLSPDLGSLSSLTKLVLNKNRFAGSIPSQLGSCVKLQLLDLS 587 (1117)
Q Consensus 508 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 587 (1117)
.|...+.++|.+. .+-.++.-++.|+.|||++|++.++. .+..++.|++|||+.|+++...--....+. |+.|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 3555666666666 34445555666666666666666553 445555555555555555532221222222 5555555
Q ss_pred ccccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEeccCccccC--CcchhhhcccceEEEeecccccC
Q 001238 588 SNQLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDLSHNELSG--DLHFLAELQNLVVLNVSHNNFSG 665 (1117)
Q Consensus 588 ~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~~--~~~~l~~l~~L~~L~ls~N~l~~ 665 (1117)
+|.++ .. ..+.+|++|+-||||+|-|.+ +..+++.|.+|+.|+|.+|.+.+
T Consensus 241 nN~l~-------------------------tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 241 NNALT-------------------------TL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ccHHH-------------------------hh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 55554 21 134455566666666666665 33446666666666666666653
No 499
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.41 E-value=2.1e-08 Score=92.15 Aligned_cols=125 Identities=26% Similarity=0.357 Sum_probs=83.9
Q ss_pred EEeccccccCCCCCcc---cccccceeEEeccccccccccccccCCchhHHHhhcCCCCcccCCccccccCCCCccEEec
Q 001238 559 KLVLNKNRFAGSIPSQ---LGSCVKLQLLDLSSNQLSGNIPASLGKIPALAIALNLSWNQICGELPAELTGLNKLGILDL 635 (1117)
Q Consensus 559 ~L~L~~N~l~~~~~~~---~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~l~~~L~Ls~N~l~~~~p~~l~~l~~L~~LdL 635 (1117)
.++|+++.|. .++++ +.....|+..+|++|.+. ..|..|.......+.|||++|.|+ .+|.++..|+.|+.|++
T Consensus 31 ~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 31 FLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 3444544443 23332 334456777788888887 666666665544478888888888 67777888888888888
Q ss_pred cCccccCCcchhhhcccceEEEeecccccCCCCCCcccccCCcc-cccCCCCC
Q 001238 636 SHNELSGDLHFLAELQNLVVLNVSHNNFSGRVPDTPFFAKLPLS-VLSGNPSL 687 (1117)
Q Consensus 636 s~N~l~~~~~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~-~~~gN~~~ 687 (1117)
+.|++.-.+..+..|.+|..||.-+|.+- .||...+..+.+.. .+..+||-
T Consensus 108 ~~N~l~~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~ 159 (177)
T KOG4579|consen 108 RFNPLNAEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLG 159 (177)
T ss_pred ccCccccchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCccc
Confidence 88888887777777888888888888765 45544444444433 35555654
No 500
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.37 E-value=3.4e-06 Score=89.75 Aligned_cols=133 Identities=14% Similarity=0.142 Sum_probs=87.3
Q ss_pred CeeeecCCeEEEEEEcCCCcEEEEEEeecCCccchHHHHHHHHHHhccCCCC--cceEEeeeecCCceEEEEEecCCCC-
Q 001238 782 NIIGQGRSGIVYKVTLPSGLTVAVKRFRASDKISTGAFSSEIATLSRIRHRN--IVRLLGWGANRKTKLLFYDYMPNGT- 858 (1117)
Q Consensus 782 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~gs- 858 (1117)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-. +++.++++...+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 46899999999984 24567888876532 3456789999999986433 5778888877778889999999863
Q ss_pred hhhhhcCCCCCCCCCHHHHHHHHHHHHHHH---------------------------------------HHHhcc-CCCc
Q 001238 859 LGMLLHDGECAGLLEWDTRFKIALGVAEGL---------------------------------------SYLHHD-CVPA 898 (1117)
Q Consensus 859 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L---------------------------------------~~LH~~-~~~~ 898 (1117)
+...+.. +......++.++++.+ ++|... ..+.
T Consensus 82 ~~~~~~~-------~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 82 FSRIISD-------NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred hhhhhcC-------CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 2211110 0011111111122211 122111 1246
Q ss_pred eeeeccccCeEEEcCCCcceecccccccc
Q 001238 899 ILHRDVKSHNILLGERYESCLADFGLARL 927 (1117)
Q Consensus 899 ivHrDlkp~Nill~~~~~~kl~DfGla~~ 927 (1117)
++|+|+.|.||++++++ +.++||+.+..
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 78999999999999888 89999998753
Done!