BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001240
(1116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CI71|CC132_MOUSE Coiled-coil domain-containing protein 132 OS=Mus musculus GN=Ccdc132
PE=1 SV=2
Length = 964
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 168/643 (26%), Positives = 292/643 (45%), Gaps = 67/643 (10%)
Query: 501 DDGSAASSSGSPWYYLRKDATTF----VSQTLRRGCKNLWQLTTSRVTVLIFSAAVCSTS 556
++ +AA++ GS + + TF V + L G +WQ +V + +
Sbjct: 351 NEETAAAAEGSN--VMSTEEATFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFK 408
Query: 557 IHQFLRNYEDLNVFILAGEAFCGIEAVEFREKLKTVCENYFVAFHRQNIYALKMVLEKET 616
F+ + ++ + GE FCG ++ +E ++ NYF HR + L+M LE ET
Sbjct: 409 YDDFIFVLDIVSRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNHHRIRLDELRMFLENET 468
Query: 617 WMKLPADT----VQVVSFAGLVGDGAPLIVSSDSSSARVIHSNKSANPTGATSRNSGFSH 672
W P + +Q+ F L +P + S SA S+ P + F
Sbjct: 469 WELCPVKSNFSILQLHEFKFLEQSRSPSVSPSKQPSA------TSSKPV------TLFEQ 516
Query: 673 WLKSGNPFSQKLIYISKGLNSPQLNGAIDGEYDDYFRGDKVTPKSSDKSHMNGTNS---V 729
+ GNPF + + D E +D + +KS +S V
Sbjct: 517 YCSGGNPFEIQADHK-------------DEETEDVLASNGYESDEQEKSAYQDYDSDSDV 563
Query: 730 PEEENEDLLADFIDEDS-QLPSR-ISKPNLWRNHSSHWNDDEITSQ--TGSSLCLLRSMD 785
PEE L D++DE + +P + +S+ L S ++ +++ + T ++L ++R +
Sbjct: 564 PEE----LKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVG 619
Query: 786 KYARLMQKLDIVNVEFFKGICQLFEVFFHYVFETFCQQNGKGSTNP--LNYRLKTALNKI 843
KY ++M L + + + QLF+ + + ++ F + + ST + RLKT LN+I
Sbjct: 620 KYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLKTTLNRI 679
Query: 844 TQ---DCDEWIKPQLTSFSSSS-----PSSVANMDVTPTSPRSLSGASFGLKERCAAADT 895
+ D + P T ++ PS N V TS +L +GL ER A ++
Sbjct: 680 QESLIDLEGSADPTATLTAAEERKEKVPSPHLNQLVILTSGDTL----YGLAERVVATES 735
Query: 896 VSLVARMLHRSRTRLQSML--LQNTAIEDFYVNLVDSVPDLIEHIHKTTARLLLHIDGYV 953
+ +A + L +++ ++ ++ FY V + +L + I+ A + + +
Sbjct: 736 LVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKAIDYEQML 795
Query: 954 DRISNAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGG----IHKEVQDLLLEYGVEIV 1009
+ N KW+VKE+ +HN YVD LL EF+ + RL I V ++L E+ + +
Sbjct: 796 LLMMNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRIPLPVSNILWEHCIRLA 855
Query: 1010 AETLIEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVPVNVKPKLQIVETFIKAYYLPET 1069
T++EG + VK+C++EGRALM LD Q + L+ + P + VET+IKAYYL E
Sbjct: 856 NRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTEN 915
Query: 1070 EYVHWAAAHPEYTKSQILGLVNLVAAMKGWKRKTRLEILEKIE 1112
+ W H EY+ Q+ LVN V +K R ++L I+
Sbjct: 916 DMERWIKEHREYSTKQLTNLVN-VCLGSHINKKARQKLLAAID 957
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 18/308 (5%)
Query: 118 SRPQVQ--VVEDLEEDFYEED-FDPVSHILEHIPPEENDLEYFEKQAALRLAQLDRVSEL 174
S PQ + ++ +E+ ++ D FD V + LE +PP N E E + L+ Q VS+
Sbjct: 45 SDPQAEQELINSIEQVYFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQ-SAVSKK 103
Query: 175 LSRQVMEHHEVMVKGMNLVRELEKDLKVANVICMNGRRHIT---SSINEVSRDLIVNTNS 231
++ ++E VK + V L+ L++A VIC NGRRH+ + S L+ N
Sbjct: 104 VADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLAN--Q 161
Query: 232 KKKQALLDMLPILTELCHACDMQLALESLVEEGNYCKAFQVLSEYLQLLDSYSQLSAIQE 291
+K+Q L+ +L L + + L ++EE +Y A Q+ E + ++ S I E
Sbjct: 162 RKRQLLIGLLKSLRTIKTLQRTDIRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISE 221
Query: 292 MSRGVEVWLGRTLQKLDSLLLGVCQEFKEEAYINVVDAYALIGDVSGLAEKIQSFFMQEV 351
++ ++ L + ++LD L +C+ F Y V AY L+G +++ F Q +
Sbjct: 222 LNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAI 281
Query: 352 ISETHSVLKSIVLEDHEVQMLNS-----RLTYSDLCERIPESKFRQCLLKTLAVLFKLIC 406
H+ + +VL E+ N+ +L Y DLC + + CL L++++
Sbjct: 282 ----HNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVML 337
Query: 407 SYHEIMNF 414
SY+ M +
Sbjct: 338 SYYRTMEW 345
>sp|Q5ZKV9|CC132_CHICK Coiled-coil domain-containing protein 132 OS=Gallus gallus GN=CCDC132
PE=2 SV=1
Length = 949
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 164/623 (26%), Positives = 280/623 (44%), Gaps = 71/623 (11%)
Query: 522 TFVSQTLRRGCKNLWQLTTSRVTVLIFSAAVCSTSIHQFLRNYEDLNVFILAGEAFCGIE 581
++V + L G +WQ +V + + + F+ + ++ + GE FCG +
Sbjct: 359 SYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVISRLMQVGEEFCGSK 418
Query: 582 AVEFREKLKTVCENYFVAFHRQNIYALKMVLEKETWMKLPA----DTVQVVSFAGLVGDG 637
+ +E ++ NYF +HR + L+M LE ETW P D +Q+ F +V
Sbjct: 419 SEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFDILQLHEFKFMVQSR 478
Query: 638 APLIVSSDSSSARVIHSNKSANPTGATSRN-SGFSHWLKSGNPFSQKLIYISKGLNSPQL 696
+P + + S P A S + F + GNPF +
Sbjct: 479 SPSV-------------SPSKQPASAISTTVTLFEQYCNGGNPFEIQA------------ 513
Query: 697 NGAIDGEYDDYFRGDKVTPKSSDKSHMNGTNS---VPEEENEDLLADFIDE---DSQLPS 750
+ D E +D + +KS +S VPEE L D++DE D+ + S
Sbjct: 514 -DSKDDETEDVLASNGYESDEQEKSAYQEYDSDSDVPEE----LKRDYVDEQTGDAPMKS 568
Query: 751 RISKPNLWRNHSSHW--NDDEITSQTGSSLCLLRSMDKYARLMQKLDIVNVEFFKGICQL 808
+S+ L S + N T ++L ++R + KY ++M L + + + QL
Sbjct: 569 -VSRETLRSRKKSDYSLNKGNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQL 627
Query: 809 FEVFFHYVFETFCQQNGKGSTNPLNY---RLKTALNKITQ---DCDEWIKPQLTSFSSSS 862
F+ + + V+ TF +N + L RL+T LN+I + D + P T ++
Sbjct: 628 FDYYLYAVY-TFFGRNDTFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTAAEE 686
Query: 863 -----PSSVANMDVTPTSPRSLSGASFGLKERCAAADTVSLVARMLHRSRTRLQSML--L 915
PS + V TS SL +GL ER A +++ +A + L +++
Sbjct: 687 RKEKVPSPHLSHLVVLTSGSSL----YGLAERVVATESLVFLAEQFEFLQPHLDAVMPAA 742
Query: 916 QNTAIEDFYVNLVDSVPDLIEHIHKTTARLLLHIDGYVDRISNAKWEVKELGLEHNGYVD 975
+ ++ FY V + +L + ++ A + + + ++N KW+VKE+ +HN YVD
Sbjct: 743 KKPFLQQFYSQTVSTANELRKPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVD 802
Query: 976 LLLGEFKHYKTRLAHGGIHKEVQ------DLLLEYGVEIVAETLIEGLSRVKRCTDEGRA 1029
LL EF+ + RL + K V+ ++L E+ + + TL+EG + VK+C++EGRA
Sbjct: 803 SLLKEFEEFNRRL--NEVSKRVRIPLIVSNILWEHCMRLANRTLVEGYANVKKCSNEGRA 860
Query: 1030 LMSLDLQVLINGLQHFVPVNVKPKLQIVETFIKAYYLPETEYVHWAAAHPEYTKSQILGL 1089
LM LD Q + L+ + P + VET+IKAYYL E + W H EY+ + L
Sbjct: 861 LMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNL 920
Query: 1090 VNLVAAMKGWKRKTRLEILEKIE 1112
VN V +K R ++L I+
Sbjct: 921 VN-VCLGSHINKKARQKLLAAID 942
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 36/306 (11%)
Query: 120 PQVQ--VVEDLEEDFYEED-FDPVSHILEHIPPEENDLEYFEKQAALRLAQLDRVSELLS 176
PQ Q ++ +EE ++ D FD V + LE +PP L L +L+ + L
Sbjct: 47 PQAQQEIINSIEEVYFSNDAFDIVKYELERLPP------------VLSLQELEEYRDKLK 94
Query: 177 RQVMEHHEVMVKGMNLVRELEKDLKVANVICMNGRRHIT---SSINEVSRDLIVNTNSKK 233
+Q + V L+ L++A VIC +GRRH+ + S L+ N +K
Sbjct: 95 QQ-------QAAELERVTSLQNGLQLAAVICADGRRHLNIAKEGFTQTSLGLLAN--QRK 145
Query: 234 KQALLDMLPILTELCHACDMQLALESLVEEGNYCKAFQVLSEYLQLLDSYSQLSAIQEMS 293
+Q L+ +L L + + L ++EE +Y A Q+ E + ++ S I E++
Sbjct: 146 RQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELN 205
Query: 294 RGVEVWLGRTLQKLDSLLLGVCQEFKEEAYINVVDAYALIGDVSGLAEKIQSFFMQEVIS 353
++ L + ++LD L +C+ F Y V AY L+G +++ F Q +
Sbjct: 206 SKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAI-- 263
Query: 354 ETHSVLKSIVLEDHEVQMLNS-----RLTYSDLCERIPESKFRQCLLKTLAVLFKLICSY 408
H+ + +VL E+ N+ +L Y DLC I + CL L++++ SY
Sbjct: 264 --HNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSY 321
Query: 409 HEIMNF 414
+ M +
Sbjct: 322 YRTMQW 327
>sp|Q96JG6|CC132_HUMAN Coiled-coil domain-containing protein 132 OS=Homo sapiens GN=CCDC132
PE=1 SV=3
Length = 964
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/615 (26%), Positives = 281/615 (45%), Gaps = 57/615 (9%)
Query: 523 FVSQTLRRGCKNLWQLTTSRVTVLIFSAAVCSTSIHQFLRNYEDLNVFILAGEAFCGIEA 582
++ + L G +WQ +V + + F+ + ++ + GE FCG ++
Sbjct: 375 YIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKS 434
Query: 583 VEFREKLKTVCENYFVAFHRQNIYALKMVLEKETWMKLPADTVQVVSFAGLVGDGAPLIV 642
+E ++ NYF +HR + L+M LE ETW P + +F+ L +
Sbjct: 435 EVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKS----NFSILQLHEFKFME 490
Query: 643 SSDSSSARVIHSNKSANPTGATSRN-SGFSHWLKSGNPFSQKLIYISKGLNSPQLNGAID 701
S S S + S P +S+ + F + GNPF Q N D
Sbjct: 491 QSRSPSV-----SPSKQPVSTSSKTVTLFEQYCSGGNPFE------------IQANHK-D 532
Query: 702 GEYDDYFRGDKVTPKSSDKSHMNGTNS---VPEEENEDLLADFIDE---DSQLPSRISKP 755
E +D + +KS +S VPEE L D++DE D + S +S+
Sbjct: 533 EETEDVLASNGYESDEQEKSAYQEYDSDSDVPEE----LKRDYVDEQTGDGPVKS-VSRE 587
Query: 756 NLWRNHSSHWNDDEITSQ--TGSSLCLLRSMDKYARLMQKLDIVNVEFFKGICQLFEVFF 813
L S ++ +++ + T ++L ++R + KY ++M L + + + QLF+ +
Sbjct: 588 TLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYL 647
Query: 814 HYVFETFCQQNGKGSTNP--LNYRLKTALNKITQ---DCDEWIKPQLTSFSSSS-----P 863
+ ++ F + + ST + RL+T LN+I + D + P T ++ P
Sbjct: 648 YAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVP 707
Query: 864 SSVANMDVTPTSPRSLSGASFGLKERCAAADTVSLVARMLHRSRTRLQSML--LQNTAIE 921
S + V TS +L +GL ER A +++ +A + L +++ ++ ++
Sbjct: 708 SPHLSHLVVLTSGDTL----YGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQ 763
Query: 922 DFYVNLVDSVPDLIEHIHKTTARLLLHIDGYVDRISNAKWEVKELGLEHNGYVDLLLGEF 981
FY V + +L + I+ A L + + ++N KW+VKE+ +HN YVD LL EF
Sbjct: 764 QFYSQTVSTASELRKPIYWIVAGKALDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEF 823
Query: 982 KHYKTRLAHGG----IHKEVQDLLLEYGVEIVAETLIEGLSRVKRCTDEGRALMSLDLQV 1037
+ + RL I V ++L E+ + + T++EG + VK+C++EGRALM LD Q
Sbjct: 824 EQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQ 883
Query: 1038 LINGLQHFVPVNVKPKLQIVETFIKAYYLPETEYVHWAAAHPEYTKSQILGLVNLVAAMK 1097
+ L+ + P + VET+IKAYYL E + W H EY+ Q+ LVN V
Sbjct: 884 FLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVN-VCLGS 942
Query: 1098 GWKRKTRLEILEKIE 1112
+K R ++L I+
Sbjct: 943 HINKKARQKLLAAID 957
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 158/341 (46%), Gaps = 24/341 (7%)
Query: 118 SRPQVQ--VVEDLEEDFYEED-FDPVSHILEHIPPEEN--DLEYFEKQAALRLAQLDRVS 172
S PQ + ++ +E+ ++ D FD V + LE +PP N +LE + + + A VS
Sbjct: 45 SDPQAEQELINSIEQVYFSVDSFDIVKYELEKLPPVLNLQELEAYRDKLKQQQAA---VS 101
Query: 173 ELLSRQVMEHHEVMVKGMNLVRELEKDLKVANVICMNGRRHIT---SSINEVSRDLIVNT 229
+ ++ ++E VK + V L+ L++A VIC NGRRH+ + S L+ N
Sbjct: 102 KKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLAN- 160
Query: 230 NSKKKQALLDMLPILTELCHACDMQLALESLVEEGNYCKAFQVLSEYLQLLDSYSQLSAI 289
+K+Q L+ +L L + + L ++EE +Y A Q+ E + ++ S I
Sbjct: 161 -QRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCI 219
Query: 290 QEMSRGVEVWLGRTLQKLDSLLLGVCQEFKEEAYINVVDAYALIGDVSGLAEKIQSFFMQ 349
E++ ++ L + ++LD L +C+ F Y V AY L+G +++ F Q
Sbjct: 220 SELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQ 279
Query: 350 EVISETHSVLKSIVLEDHEVQMLNS-----RLTYSDLCERIPESKFRQCLLKTLAVLFKL 404
+ H+ + +VL E+ N+ +L Y DLC + + CL L+++
Sbjct: 280 AI----HNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEV 335
Query: 405 ICSYHEIMNFQLENKTPNTKQKESDISMSSGEIHQINSDPG 445
+ SY+ M + ++ +T +M E + N D G
Sbjct: 336 MLSYYRTMEWHEKHDNEDTASASEGSNMIGTE--ETNFDRG 374
>sp|O74562|SEC8_SCHPO Exocyst complex component sec8 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sec8 PE=1 SV=2
Length = 1073
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 25/179 (13%)
Query: 106 SSSSEELSSIYGSRPQ--------VQVVEDLEEDFYEEDFDPVSHILEHIPPEENDLEYF 157
+S ELSS Y SR V +ED +D ED+ P+S LE + D F
Sbjct: 32 TSMDNELSSEYASRGMHIGDLENLVNEIEDEWKDLGREDYQPISTALELL-----DDSSF 86
Query: 158 EKQAALRLAQLDRVSELLSRQVMEHHEVMVKGMNLVRELEKDLKVANVICMNGRRHITSS 217
+ L DR+S L H + +G++ E+ + ++ N + ++ +
Sbjct: 87 GRDYKSFLNVYDRISAALQTIAHTHKDDFTRGISAYGEIMEGIQKCNSRIIALKQSL--- 143
Query: 218 INEVSRDLIVNTNSKKKQALL-------DMLPILTELCHACDMQLALESLVEEGNYCKA 269
E S++ I NTNSK+ Q L ++ +L EL A + +LV+ Y A
Sbjct: 144 --EASQECIGNTNSKELQQTLARSSQYKKVISVLKELNEANQLFDNFHTLVDSKQYYHA 200
>sp|Q5M7A4|UBA5_RAT Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus
GN=Uba5 PE=2 SV=1
Length = 403
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 932 PDLIEHIHKTTARLLLHIDGYVDRISNAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHG 991
PD++ +H + H + +++RISN GLE VDL+L +++ R+A
Sbjct: 138 PDVLFEVHNYNITTVEHFEHFMNRISNG-------GLEEGQPVDLVLSCVDNFEARMAIN 190
Query: 992 GIHKEVQDLLLEYGV 1006
E+ +E GV
Sbjct: 191 TACNELGQTWMESGV 205
>sp|Q8VE47|UBA5_MOUSE Ubiquitin-like modifier-activating enzyme 5 OS=Mus musculus GN=Uba5
PE=2 SV=2
Length = 403
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 932 PDLIEHIHKTTARLLLHIDGYVDRISNAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHG 991
PD++ +H + H + +++RISN GLE VDL+L +++ R+A
Sbjct: 138 PDVLFEVHNYNITTVEHFEHFMNRISNG-------GLEEGQPVDLVLSCVDNFEARMAIN 190
Query: 992 GIHKEVQDLLLEYGV 1006
E+ +E GV
Sbjct: 191 TACNELGQTWMESGV 205
>sp|Q80ZD8|AMGO1_MOUSE Amphoterin-induced protein 1 OS=Mus musculus GN=Amigo1 PE=1 SV=1
Length = 492
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 217 SINEVSR---DLIVNTNSKKKQALLDMLPILTELCHACDMQLALESLVEEGNY------- 266
S N++SR +LI + N K LLD+ + D+Q L + V+ G Y
Sbjct: 166 SQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQ-KLPAWVKNGLYLHNNPLE 224
Query: 267 --CKAFQVLSEYLQLLDSYSQLSAIQEMSRGVEVWLGRTLQKLDSLLLGVCQEFKEEAY 323
CK +Q+ S + Y QLS++ + + + L + SL C E+KE A+
Sbjct: 225 CDCKLYQLFSHW-----QYRQLSSVMDFQEDLYCMHSKKLHNIFSLDFFNCSEYKESAW 278
>sp|O67321|PURA_AQUAE Adenylosuccinate synthetase OS=Aquifex aeolicus (strain VF5) GN=purA
PE=3 SV=1
Length = 432
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 23/137 (16%)
Query: 976 LLLGEFKHYKTRLAHGGIHKEVQ----DLLLEYGVEIVAETLIEGLSRVKRCTDEGRALM 1031
LG K Y TR+ G E++ + L E G E + T R +RC L+
Sbjct: 258 FFLGVAKAYTTRVGEGPFPTELKGEEGEKLRELGGEYGSTT-----GRPRRCG--WLDLV 310
Query: 1032 SLDLQVLINGLQHFVPVNVKPKLQIVETF----IKAYYLPETEYVHWAAAHPEYTKSQIL 1087
+L V +NGL FV KL +++TF + Y + E + + A + S+++
Sbjct: 311 ALKYAVQVNGLDGFVIT----KLDVLDTFDEVKVCVAYELDGEVIDYFPA----SYSELI 362
Query: 1088 GLVNLVAAMKGWKRKTR 1104
+ + +KGWK+ T+
Sbjct: 363 RVKPVYKTLKGWKKSTK 379
>sp|A6KX92|HUTI_BACV8 Imidazolonepropionase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM
1447 / NCTC 11154) GN=hutI PE=3 SV=1
Length = 414
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 1010 AETLIEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVPVNVKP--KLQIVETFIKAYYLP 1067
AE ++ +SR+ T EG++ LD + L +N P K+ I TF+ A+ LP
Sbjct: 128 AEWFLDTMSRMGVTTVEGKSGYGLDRDTELKQLSIMQAINECPDRKVDIATTFLGAHALP 187
Query: 1068 ETEYVHWAAAHPEYTKSQILGLVN 1091
E EY + A+ ++ +++L +++
Sbjct: 188 E-EYKGRSDAYIDFLINEMLPMIH 210
>sp|B0WU24|UFL1_CULQU E3 UFM1-protein ligase 1 homolog OS=Culex quinquefasciatus
GN=CPIJ010920 PE=3 SV=1
Length = 785
Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 810 EVFFHYVFETFCQQNGKGSTNPLNYRLKTALNKITQDCDEWIKPQLTSFSSSSPSSVANM 869
E+FF+ E C N G+T + R NKI DC + + L + + ++ SS A
Sbjct: 587 EIFFYVAAE--CNLNSNGTTLTVEQR-----NKIAADCGQEYRGALQALNKATASSAAVD 639
Query: 870 DVTPTSPRSLSGASF 884
D + SL S
Sbjct: 640 DFLVVAENSLQACSM 654
>sp|Q2FJK0|Y415_STAA3 Uncharacterized lipoprotein SAUSA300_0415 OS=Staphylococcus aureus
(strain USA300) GN=lpl3 PE=3 SV=1
Length = 263
Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 12/206 (5%)
Query: 233 KKQALLDMLPILTELCHACDMQLALESLVEEGNYCKAFQVLSEYLQLLDSYSQLSAIQEM 292
K+ ALL + ILT CD Q +EG+ K Q+ + + LD Y + +++
Sbjct: 5 KRLALLISVIILTIFIMGCDSQSDTAENPKEGS--KEAQIKKSFSKTLDMYP-IKNLEDF 61
Query: 293 SRGVEVWLGRTLQKLDSLLLGVCQEFKEEAYINVVDAYALIGDVSGLAEKIQSFFMQEVI 352
G E + +K D + E ++ V+ + ++ E + FF+ + I
Sbjct: 62 Y-GKEGYRDGEFKKDDKGTWLIRSEIVKQPKGKVMKTRGMQLYINRNTETAKGFFVLKEI 120
Query: 353 SETHSVLKSIVLEDHEVQMLNSRLTYSDLCERIPESKFRQCLLKTLAVLFKLICSYHEIM 412
SE ++ + E +EV+M+ +++ IP + +K FK Y
Sbjct: 121 SENNNRVNKDKEEKYEVKMVGNKI--------IPTEQINDEKIKKEIENFKFFVQYGNFK 172
Query: 413 NFQLENKTPNTKQKESDISMSSGEIH 438
NF+ N + E+ I + ++H
Sbjct: 173 NFEKYNNGEFSYNPEAPIYSAKYQLH 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 408,328,053
Number of Sequences: 539616
Number of extensions: 17565820
Number of successful extensions: 56909
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 56671
Number of HSP's gapped (non-prelim): 247
length of query: 1116
length of database: 191,569,459
effective HSP length: 128
effective length of query: 988
effective length of database: 122,498,611
effective search space: 121028627668
effective search space used: 121028627668
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)