Query 001253
Match_columns 1114
No_of_seqs 1153 out of 7137
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 19:56:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001253.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001253hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-114 3E-119 1125.2 66.0 923 32-1090 27-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.2E-61 2.6E-66 629.7 26.6 515 200-718 71-587 (968)
3 KOG1187 Serine/threonine prote 100.0 3.4E-47 7.5E-52 427.0 29.6 289 795-1089 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 1.7E-45 3.7E-50 385.7 21.2 252 809-1081 79-334 (364)
5 KOG0192 Tyrosine kinase specif 100.0 4.6E-45 9.9E-50 405.8 24.1 263 809-1092 41-309 (362)
6 KOG0197 Tyrosine kinases [Sign 100.0 2E-45 4.4E-50 404.0 16.1 266 801-1090 198-465 (468)
7 KOG0575 Polo-like serine/threo 100.0 8.4E-44 1.8E-48 394.1 23.3 250 809-1081 18-268 (592)
8 KOG0615 Serine/threonine prote 100.0 2.1E-44 4.5E-49 378.5 16.6 255 808-1081 171-436 (475)
9 KOG0595 Serine/threonine-prote 100.0 3.7E-43 8.1E-48 370.4 20.7 202 809-1017 10-218 (429)
10 KOG0593 Predicted protein kina 100.0 1.4E-43 3E-48 357.2 15.0 267 809-1081 2-283 (396)
11 KOG0598 Ribosomal protein S6 k 100.0 3.2E-43 7E-48 368.6 14.8 270 808-1105 24-294 (357)
12 KOG0472 Leucine-rich repeat pr 100.0 5.6E-46 1.2E-50 387.0 -7.6 484 193-697 40-544 (565)
13 KOG0472 Leucine-rich repeat pr 100.0 1.1E-46 2.3E-51 392.5 -13.4 516 122-666 41-562 (565)
14 KOG0591 NIMA (never in mitosis 100.0 3.9E-43 8.5E-48 350.3 10.6 258 809-1085 19-284 (375)
15 KOG1026 Nerve growth factor re 100.0 3.5E-42 7.6E-47 396.4 17.5 264 805-1090 482-766 (774)
16 KOG0592 3-phosphoinositide-dep 100.0 1.6E-41 3.4E-46 368.8 15.8 263 808-1102 72-348 (604)
17 KOG0659 Cdk activating kinase 100.0 1.1E-40 2.3E-45 331.3 16.9 268 809-1082 2-281 (318)
18 KOG0661 MAPK related serine/th 100.0 1.2E-41 2.6E-46 363.9 10.9 267 807-1082 8-291 (538)
19 KOG0600 Cdc2-related protein k 100.0 4.3E-40 9.2E-45 354.8 20.2 266 808-1081 116-399 (560)
20 KOG0196 Tyrosine kinase, EPH ( 100.0 1E-40 2.3E-45 374.3 14.2 261 809-1091 629-896 (996)
21 KOG0582 Ste20-like serine/thre 100.0 8.1E-40 1.8E-44 347.3 19.0 261 808-1081 25-292 (516)
22 KOG0578 p21-activated serine/t 100.0 2.6E-40 5.6E-45 363.5 15.6 250 808-1081 272-522 (550)
23 KOG1095 Protein tyrosine kinas 100.0 7.4E-40 1.6E-44 391.3 20.7 269 807-1097 690-972 (1025)
24 KOG0198 MEKK and related serin 100.0 7.5E-40 1.6E-44 351.9 18.1 258 809-1087 17-281 (313)
25 KOG0193 Serine/threonine prote 100.0 3.9E-40 8.5E-45 362.2 15.9 277 802-1098 385-665 (678)
26 KOG0616 cAMP-dependent protein 100.0 4.1E-40 8.9E-45 332.0 14.5 264 809-1104 44-309 (355)
27 KOG0194 Protein tyrosine kinas 100.0 6.2E-40 1.3E-44 367.7 14.3 269 803-1092 151-426 (474)
28 KOG0605 NDR and related serine 100.0 3.5E-39 7.5E-44 351.5 19.0 275 807-1107 139-460 (550)
29 KOG4194 Membrane glycoprotein 100.0 7.3E-41 1.6E-45 363.5 5.7 398 321-721 81-482 (873)
30 KOG0201 Serine/threonine prote 100.0 4.4E-40 9.5E-45 349.7 11.0 249 809-1081 13-262 (467)
31 KOG4721 Serine/threonine prote 100.0 7.5E-40 1.6E-44 353.9 12.6 242 811-1085 126-367 (904)
32 KOG4194 Membrane glycoprotein 100.0 1.2E-40 2.5E-45 361.9 6.1 365 272-639 80-447 (873)
33 KOG0694 Serine/threonine prote 100.0 2.1E-39 4.5E-44 363.0 15.7 246 807-1076 366-613 (694)
34 KOG0597 Serine-threonine prote 100.0 2E-39 4.3E-44 351.3 14.4 248 809-1081 2-250 (808)
35 KOG1094 Discoidin domain recep 100.0 6.9E-39 1.5E-43 348.4 18.3 266 806-1086 535-804 (807)
36 KOG0583 Serine/threonine prote 100.0 4.4E-38 9.5E-43 354.0 24.7 258 807-1087 15-279 (370)
37 cd05102 PTKc_VEGFR3 Catalytic 100.0 2E-38 4.4E-43 362.3 21.6 262 806-1088 4-336 (338)
38 KOG0663 Protein kinase PITSLRE 100.0 2.6E-38 5.6E-43 323.5 18.8 264 809-1081 76-360 (419)
39 KOG2052 Activin A type IB rece 100.0 1.7E-37 3.7E-42 329.5 24.2 270 805-1089 207-506 (513)
40 KOG0588 Serine/threonine prote 100.0 2.6E-38 5.6E-43 350.5 18.3 250 809-1082 12-263 (786)
41 KOG0580 Serine/threonine prote 100.0 9.7E-39 2.1E-43 313.0 11.7 250 808-1081 21-272 (281)
42 KOG4278 Protein tyrosine kinas 100.0 1.7E-38 3.6E-43 345.8 14.6 262 802-1087 260-524 (1157)
43 PHA02988 hypothetical protein; 100.0 3.2E-37 6.9E-42 342.1 23.1 250 815-1088 26-281 (283)
44 cd05631 STKc_GRK4 Catalytic do 100.0 2.9E-37 6.3E-42 343.5 22.8 252 811-1081 2-260 (285)
45 KOG0618 Serine/threonine phosp 100.0 1.4E-40 3.1E-45 380.9 -4.9 504 107-689 3-510 (1081)
46 KOG3653 Transforming growth fa 100.0 3.5E-37 7.5E-42 329.6 21.0 273 809-1091 210-508 (534)
47 KOG0611 Predicted serine/threo 100.0 2.7E-38 5.9E-43 329.0 11.4 250 809-1083 53-304 (668)
48 cd05104 PTKc_Kit Catalytic dom 100.0 4.8E-37 1E-41 354.3 22.7 261 805-1086 31-374 (375)
49 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.7E-37 1E-41 338.3 20.3 257 808-1086 4-265 (266)
50 KOG4257 Focal adhesion tyrosin 100.0 2.1E-37 4.7E-42 338.3 16.7 261 805-1088 385-651 (974)
51 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.5E-37 1.6E-41 334.9 21.1 252 809-1084 4-256 (256)
52 KOG0658 Glycogen synthase kina 100.0 1.7E-37 3.8E-42 324.6 14.6 264 809-1086 24-312 (364)
53 cd05096 PTKc_DDR1 Catalytic do 100.0 2.3E-36 4.9E-41 340.0 24.6 263 808-1085 4-304 (304)
54 KOG0033 Ca2+/calmodulin-depend 100.0 5.1E-39 1.1E-43 314.2 2.5 252 808-1080 10-265 (355)
55 KOG0660 Mitogen-activated prot 100.0 1.7E-37 3.6E-42 324.2 13.7 279 808-1093 21-323 (359)
56 cd05106 PTKc_CSF-1R Catalytic 100.0 1E-36 2.2E-41 351.3 21.7 262 805-1087 34-373 (374)
57 KOG0585 Ca2+/calmodulin-depend 100.0 7.4E-37 1.6E-41 326.6 18.6 258 808-1085 96-375 (576)
58 cd05612 STKc_PRKX_like Catalyt 100.0 3.6E-37 7.8E-42 343.7 17.1 247 809-1081 1-253 (291)
59 cd05571 STKc_PKB Catalytic dom 100.0 5.7E-37 1.2E-41 347.3 18.2 244 815-1081 1-250 (323)
60 KOG0618 Serine/threonine phosp 100.0 9.7E-40 2.1E-44 374.1 -4.7 439 224-691 47-488 (1081)
61 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-36 2.6E-41 339.4 20.2 267 809-1081 1-283 (287)
62 PTZ00263 protein kinase A cata 100.0 5.7E-37 1.2E-41 348.0 17.7 246 809-1080 18-269 (329)
63 KOG0589 Serine/threonine prote 100.0 2.6E-37 5.6E-42 339.6 14.2 252 809-1082 4-258 (426)
64 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.2E-36 4.7E-41 337.1 21.7 264 809-1081 5-284 (288)
65 KOG0610 Putative serine/threon 100.0 1.3E-36 2.7E-41 320.8 18.5 254 808-1080 76-390 (459)
66 cd05072 PTKc_Lyn Catalytic dom 100.0 1.8E-36 3.9E-41 332.9 19.7 256 807-1086 4-261 (261)
67 KOG0594 Protein kinase PCTAIRE 100.0 2.8E-36 6E-41 317.2 19.7 271 809-1086 11-308 (323)
68 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.6E-36 3.5E-41 345.5 19.3 256 809-1082 1-257 (333)
69 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.7E-36 1.2E-40 336.4 23.2 267 808-1081 4-287 (303)
70 cd05068 PTKc_Frk_like Catalyti 100.0 4.2E-36 9.2E-41 330.0 21.5 257 806-1086 3-261 (261)
71 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.9E-36 1.3E-40 345.7 23.5 263 805-1088 33-399 (400)
72 KOG2345 Serine/threonine prote 100.0 9.2E-37 2E-41 300.3 13.8 263 806-1086 18-300 (302)
73 KOG0574 STE20-like serine/thre 100.0 3.7E-38 8.1E-43 316.1 4.0 249 809-1081 33-282 (502)
74 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.9E-36 1.1E-40 328.2 21.0 252 809-1084 4-256 (256)
75 KOG1989 ARK protein kinase fam 100.0 2.9E-36 6.3E-41 349.9 20.1 268 806-1097 34-322 (738)
76 PTZ00426 cAMP-dependent protei 100.0 1.7E-36 3.7E-41 344.6 17.8 248 808-1081 29-283 (340)
77 cd08228 STKc_Nek6 Catalytic do 100.0 1.9E-35 4.2E-40 326.0 25.5 261 809-1087 2-266 (267)
78 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-36 4.2E-41 341.3 17.8 241 817-1080 1-245 (312)
79 cd05593 STKc_PKB_gamma Catalyt 100.0 3.3E-36 7.2E-41 341.4 19.8 244 815-1081 1-250 (328)
80 cd06649 PKc_MEK2 Catalytic dom 100.0 9E-36 2E-40 338.7 23.4 264 808-1082 4-301 (331)
81 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-35 2.4E-40 330.8 23.4 253 810-1081 1-260 (285)
82 KOG1025 Epidermal growth facto 100.0 2E-36 4.4E-41 340.6 17.4 261 810-1093 697-964 (1177)
83 cd05595 STKc_PKB_beta Catalyti 100.0 2.9E-36 6.4E-41 341.3 18.9 244 815-1081 1-250 (323)
84 KOG0032 Ca2+/calmodulin-depend 100.0 9.4E-36 2E-40 334.4 22.7 253 808-1081 34-292 (382)
85 cd05052 PTKc_Abl Catalytic dom 100.0 4.4E-36 9.6E-41 330.1 19.8 255 808-1086 5-262 (263)
86 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.8E-36 4E-41 348.2 17.0 255 809-1082 1-285 (350)
87 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.8E-36 8.3E-41 330.4 18.6 257 806-1086 3-261 (261)
88 cd05596 STKc_ROCK Catalytic do 100.0 2.4E-36 5.2E-41 347.9 17.7 256 807-1081 41-303 (370)
89 KOG0577 Serine/threonine prote 100.0 3.7E-37 8.1E-42 334.4 10.1 248 809-1081 26-277 (948)
90 cd05621 STKc_ROCK2 Catalytic d 100.0 3.8E-36 8.2E-41 345.7 19.1 258 806-1082 40-304 (370)
91 cd05059 PTKc_Tec_like Catalyti 100.0 9.9E-36 2.1E-40 325.9 21.4 251 809-1083 4-255 (256)
92 cd05601 STKc_CRIK Catalytic do 100.0 4.9E-36 1.1E-40 341.2 19.7 255 809-1081 1-262 (330)
93 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-35 2.5E-40 338.5 22.6 254 810-1081 1-266 (332)
94 cd05626 STKc_LATS2 Catalytic d 100.0 6.9E-36 1.5E-40 346.3 20.7 254 810-1081 2-304 (381)
95 PF07714 Pkinase_Tyr: Protein 100.0 2.7E-36 5.8E-41 330.5 16.1 249 813-1083 3-259 (259)
96 cd05033 PTKc_EphR Catalytic do 100.0 1.7E-35 3.6E-40 326.3 22.2 256 809-1086 4-265 (266)
97 cd05054 PTKc_VEGFR Catalytic d 100.0 7.2E-36 1.6E-40 339.5 19.8 262 806-1088 4-335 (337)
98 cd05608 STKc_GRK1 Catalytic do 100.0 1.8E-35 4E-40 328.1 22.4 247 817-1081 1-256 (280)
99 KOG0599 Phosphorylase kinase g 100.0 1.2E-36 2.6E-41 302.0 11.0 253 809-1081 17-282 (411)
100 cd05589 STKc_PKN Catalytic dom 100.0 9.1E-36 2E-40 337.8 19.7 247 811-1081 1-256 (324)
101 PHA03212 serine/threonine kina 100.0 2.4E-35 5.1E-40 340.7 23.2 260 808-1081 91-375 (391)
102 KOG0667 Dual-specificity tyros 100.0 8E-36 1.7E-40 335.2 18.5 199 808-1018 185-393 (586)
103 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-35 2.6E-40 336.9 20.3 244 815-1076 1-250 (329)
104 PLN00034 mitogen-activated pro 100.0 2.3E-35 5.1E-40 338.5 22.8 248 809-1081 74-327 (353)
105 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.3E-35 4.9E-40 324.0 21.6 254 807-1085 4-259 (260)
106 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.3E-35 5.1E-40 323.9 21.7 255 806-1085 3-259 (260)
107 cd05071 PTKc_Src Catalytic dom 100.0 2.1E-35 4.6E-40 324.4 21.3 254 808-1086 5-260 (262)
108 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-35 2.7E-40 337.0 20.1 248 815-1080 1-260 (329)
109 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-35 2.5E-40 335.3 19.5 241 815-1078 1-243 (316)
110 cd05048 PTKc_Ror Catalytic Dom 100.0 2.4E-35 5.2E-40 328.3 21.8 256 809-1086 5-283 (283)
111 cd05594 STKc_PKB_alpha Catalyt 100.0 5.7E-36 1.2E-40 339.6 16.8 244 815-1081 1-251 (325)
112 cd05599 STKc_NDR_like Catalyti 100.0 8E-36 1.7E-40 344.4 18.2 254 809-1081 1-295 (364)
113 cd05108 PTKc_EGFR Catalytic do 100.0 2.1E-35 4.5E-40 333.8 21.1 262 808-1092 6-274 (316)
114 cd05607 STKc_GRK7 Catalytic do 100.0 3.8E-35 8.2E-40 325.0 22.7 250 817-1084 1-252 (277)
115 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.2E-35 7E-40 339.3 22.8 263 804-1087 32-400 (401)
116 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-35 4.6E-40 340.1 20.9 204 809-1016 1-239 (363)
117 PRK13184 pknD serine/threonine 100.0 4.7E-35 1E-39 353.9 24.7 263 809-1089 2-293 (932)
118 cd05590 STKc_nPKC_eta Catalyti 100.0 1.1E-35 2.4E-40 336.1 18.2 239 815-1076 1-241 (320)
119 cd05587 STKc_cPKC Catalytic do 100.0 1.5E-35 3.4E-40 335.9 19.4 244 810-1076 1-246 (324)
120 KOG4717 Serine/threonine prote 100.0 9.8E-36 2.1E-40 318.4 16.5 249 809-1081 18-269 (864)
121 cd05111 PTK_HER3 Pseudokinase 100.0 1.2E-34 2.6E-39 321.5 25.9 260 809-1091 7-273 (279)
122 KOG4279 Serine/threonine prote 100.0 2.9E-36 6.4E-41 332.4 12.7 244 816-1081 582-831 (1226)
123 cd06650 PKc_MEK1 Catalytic dom 100.0 5.4E-35 1.2E-39 332.2 23.5 202 807-1016 3-205 (333)
124 cd05069 PTKc_Yes Catalytic dom 100.0 4.7E-35 1E-39 321.4 22.2 253 808-1085 5-259 (260)
125 cd05622 STKc_ROCK1 Catalytic d 100.0 1.3E-35 2.8E-40 341.6 18.6 262 802-1082 36-304 (371)
126 cd08229 STKc_Nek7 Catalytic do 100.0 6E-35 1.3E-39 322.0 23.0 261 809-1087 2-266 (267)
127 cd05034 PTKc_Src_like Catalyti 100.0 3.6E-35 7.7E-40 322.7 21.1 256 806-1085 3-260 (261)
128 cd05062 PTKc_IGF-1R Catalytic 100.0 2E-35 4.3E-40 327.7 19.2 258 806-1085 3-277 (277)
129 cd05591 STKc_nPKC_epsilon Cata 100.0 1.4E-35 3.1E-40 335.7 18.4 244 815-1081 1-253 (321)
130 cd05616 STKc_cPKC_beta Catalyt 100.0 1.9E-35 4.2E-40 334.9 19.3 244 810-1076 1-246 (323)
131 cd05109 PTKc_HER2 Catalytic do 100.0 4.6E-35 1E-39 325.1 21.9 264 808-1094 6-276 (279)
132 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.1E-34 4.5E-39 317.8 26.9 261 809-1087 2-266 (267)
133 cd05093 PTKc_TrkB Catalytic do 100.0 3E-35 6.5E-40 328.1 20.1 260 808-1090 4-283 (288)
134 cd05629 STKc_NDR_like_fungal C 100.0 1.4E-35 3.1E-40 343.6 18.1 255 809-1082 1-305 (377)
135 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.5E-35 7.7E-40 335.9 21.2 266 810-1082 1-290 (338)
136 cd05584 STKc_p70S6K Catalytic 100.0 2.1E-35 4.6E-40 334.4 19.1 244 815-1081 2-255 (323)
137 cd05084 PTKc_Fes Catalytic dom 100.0 4.2E-35 9E-40 320.3 20.5 248 816-1085 2-252 (252)
138 cd05625 STKc_LATS1 Catalytic d 100.0 1.8E-35 4E-40 343.3 18.8 253 810-1081 2-304 (382)
139 cd05597 STKc_DMPK_like Catalyt 100.0 3.2E-35 6.8E-40 334.0 20.3 258 809-1082 1-266 (331)
140 cd07862 STKc_CDK6 Catalytic do 100.0 5.2E-35 1.1E-39 326.7 21.7 265 809-1081 1-286 (290)
141 KOG0199 ACK and related non-re 100.0 4.6E-36 9.9E-41 332.2 12.7 263 808-1093 109-381 (1039)
142 PTZ00267 NIMA-related protein 100.0 4.2E-35 9.1E-40 348.4 21.7 250 809-1081 67-322 (478)
143 cd05061 PTKc_InsR Catalytic do 100.0 4.8E-35 1E-39 326.4 20.7 269 806-1100 3-288 (288)
144 cd05598 STKc_LATS Catalytic do 100.0 1.3E-35 2.8E-40 343.9 16.8 255 809-1082 1-301 (376)
145 cd05570 STKc_PKC Catalytic dom 100.0 2.5E-35 5.5E-40 333.0 18.5 244 815-1081 1-251 (318)
146 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.1E-35 4.5E-40 334.9 17.6 244 815-1076 1-248 (327)
147 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.9E-35 1.9E-39 323.5 22.4 266 811-1087 6-282 (283)
148 cd05085 PTKc_Fer Catalytic dom 100.0 8.3E-35 1.8E-39 317.5 21.5 247 816-1084 2-249 (250)
149 cd05049 PTKc_Trk Catalytic dom 100.0 5.2E-35 1.1E-39 325.0 20.2 256 808-1085 4-280 (280)
150 cd05619 STKc_nPKC_theta Cataly 100.0 3.9E-35 8.4E-40 330.8 19.3 243 815-1080 1-246 (316)
151 cd05575 STKc_SGK Catalytic dom 100.0 1.7E-35 3.7E-40 335.4 16.4 240 815-1077 1-242 (323)
152 cd05602 STKc_SGK1 Catalytic do 100.0 2E-35 4.3E-40 335.2 17.0 246 815-1083 1-248 (325)
153 cd05094 PTKc_TrkC Catalytic do 100.0 6.4E-35 1.4E-39 326.0 20.7 258 809-1089 5-285 (291)
154 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.8E-35 1.5E-39 328.7 20.9 265 809-1081 6-285 (309)
155 cd05632 STKc_GRK5 Catalytic do 100.0 1.7E-34 3.7E-39 321.3 23.2 252 811-1081 2-260 (285)
156 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.8E-35 2.1E-39 320.5 21.1 257 808-1086 4-267 (268)
157 cd05620 STKc_nPKC_delta Cataly 100.0 4.5E-35 9.7E-40 330.5 18.7 243 815-1080 1-246 (316)
158 cd05053 PTKc_FGFR Catalytic do 100.0 5.8E-35 1.3E-39 326.9 19.5 261 805-1087 8-292 (293)
159 cd08529 STKc_FA2-like Catalyti 100.0 1.5E-34 3.2E-39 316.8 22.2 250 810-1081 1-252 (256)
160 cd05055 PTKc_PDGFR Catalytic d 100.0 1.4E-34 2.9E-39 324.7 22.2 260 806-1086 32-301 (302)
161 cd07853 STKc_NLK Catalytic dom 100.0 6.5E-35 1.4E-39 337.4 20.2 266 810-1082 1-288 (372)
162 PTZ00283 serine/threonine prot 100.0 8.6E-35 1.9E-39 345.4 21.7 255 807-1082 30-297 (496)
163 cd07876 STKc_JNK2 Catalytic do 100.0 1.3E-34 2.8E-39 333.4 22.3 264 808-1081 20-314 (359)
164 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-34 2.4E-39 319.8 20.9 256 809-1086 4-266 (267)
165 cd06625 STKc_MEKK3_like Cataly 100.0 2.1E-34 4.6E-39 316.9 23.0 254 809-1082 2-260 (263)
166 cd05088 PTKc_Tie2 Catalytic do 100.0 8.8E-35 1.9E-39 326.5 20.3 261 809-1093 7-287 (303)
167 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-34 3.9E-39 316.0 22.1 248 816-1086 2-255 (257)
168 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-34 2.7E-39 331.0 21.6 263 806-1089 4-342 (343)
169 cd05623 STKc_MRCK_alpha Cataly 100.0 6.8E-35 1.5E-39 331.7 19.4 258 809-1082 1-266 (332)
170 cd05112 PTKc_Itk Catalytic dom 100.0 1.3E-34 2.9E-39 317.1 21.0 252 809-1084 4-256 (256)
171 cd05624 STKc_MRCK_beta Catalyt 100.0 6.4E-35 1.4E-39 331.5 18.8 257 809-1081 1-265 (331)
172 cd05630 STKc_GRK6 Catalytic do 100.0 3.1E-34 6.8E-39 319.0 23.9 252 811-1081 2-260 (285)
173 cd05097 PTKc_DDR_like Catalyti 100.0 1.7E-34 3.6E-39 323.3 21.8 263 808-1085 4-295 (295)
174 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.9E-34 6.2E-39 319.7 23.6 261 809-1087 4-284 (284)
175 cd05604 STKc_SGK3 Catalytic do 100.0 2.8E-35 6E-40 334.0 15.6 246 815-1083 1-248 (325)
176 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-34 3.3E-39 323.8 21.2 261 809-1093 2-282 (297)
177 KOG0444 Cytoskeletal regulator 100.0 2.7E-37 5.8E-42 336.9 -1.1 385 99-493 4-393 (1255)
178 cd05073 PTKc_Hck Catalytic dom 100.0 1.5E-34 3.3E-39 317.3 20.7 255 806-1085 3-259 (260)
179 cd05603 STKc_SGK2 Catalytic do 100.0 3.8E-35 8.3E-40 332.3 16.4 240 815-1077 1-242 (321)
180 cd06646 STKc_MAP4K5 Catalytic 100.0 1.6E-34 3.5E-39 318.6 20.9 254 808-1082 8-265 (267)
181 cd05043 PTK_Ryk Pseudokinase d 100.0 1.5E-34 3.2E-39 321.3 20.7 261 807-1089 4-279 (280)
182 cd08219 STKc_Nek3 Catalytic do 100.0 1.6E-34 3.4E-39 316.4 20.5 250 810-1082 1-252 (255)
183 cd06654 STKc_PAK1 Catalytic do 100.0 2.1E-34 4.4E-39 322.4 21.9 249 809-1081 20-269 (296)
184 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.2E-34 2.6E-39 326.4 20.1 263 806-1090 15-303 (307)
185 cd05615 STKc_cPKC_alpha Cataly 100.0 8E-35 1.7E-39 329.5 18.8 244 810-1076 1-246 (323)
186 cd05090 PTKc_Ror1 Catalytic do 100.0 1.6E-34 3.6E-39 321.4 21.0 255 809-1085 5-282 (283)
187 cd05045 PTKc_RET Catalytic dom 100.0 1.7E-34 3.7E-39 322.4 21.2 258 810-1089 1-289 (290)
188 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-34 4.1E-39 318.6 21.3 259 808-1089 5-268 (270)
189 PTZ00036 glycogen synthase kin 100.0 8.8E-35 1.9E-39 341.5 19.6 264 808-1086 65-357 (440)
190 cd05082 PTKc_Csk Catalytic dom 100.0 2.4E-34 5.3E-39 315.0 21.6 249 808-1086 5-256 (256)
191 KOG0444 Cytoskeletal regulator 100.0 1.7E-37 3.8E-42 338.3 -3.4 364 198-570 7-374 (1255)
192 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-34 3.3E-39 320.5 19.9 257 807-1085 4-277 (277)
193 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.6E-34 3.5E-39 324.9 20.1 262 806-1089 12-299 (304)
194 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-34 3.9E-39 321.2 20.1 261 809-1086 4-283 (284)
195 cd05582 STKc_RSK_N N-terminal 100.0 2.8E-35 6.1E-40 333.0 13.7 240 815-1078 2-245 (318)
196 cd05627 STKc_NDR2 Catalytic do 100.0 8.7E-35 1.9E-39 334.7 18.0 253 809-1080 1-291 (360)
197 cd07874 STKc_JNK3 Catalytic do 100.0 1.9E-34 4.1E-39 331.7 20.7 266 807-1082 15-311 (355)
198 cd05051 PTKc_DDR Catalytic dom 100.0 3.8E-34 8.2E-39 320.8 22.4 263 808-1085 4-296 (296)
199 cd05035 PTKc_Axl_like Catalyti 100.0 5.2E-34 1.1E-38 315.7 23.0 255 811-1086 1-272 (273)
200 cd05092 PTKc_TrkA Catalytic do 100.0 2E-34 4.4E-39 319.9 19.8 255 808-1085 4-280 (280)
201 cd05116 PTKc_Syk Catalytic dom 100.0 3.3E-34 7.2E-39 314.1 21.2 248 816-1086 2-255 (257)
202 cd05091 PTKc_Ror2 Catalytic do 100.0 1.6E-34 3.5E-39 321.5 18.9 255 809-1085 5-282 (283)
203 cd05039 PTKc_Csk_like Catalyti 100.0 4.5E-34 9.7E-39 312.9 21.6 250 808-1086 5-256 (256)
204 cd05032 PTKc_InsR_like Catalyt 100.0 2.3E-34 5E-39 319.3 19.5 257 807-1085 4-277 (277)
205 cd06612 STKc_MST1_2 Catalytic 100.0 5.4E-34 1.2E-38 312.3 22.2 249 809-1081 3-252 (256)
206 cd06619 PKc_MKK5 Catalytic dom 100.0 8.2E-34 1.8E-38 314.9 23.9 250 809-1082 1-253 (279)
207 PHA03209 serine/threonine kina 100.0 8E-34 1.7E-38 325.7 24.5 193 806-1013 63-256 (357)
208 cd05060 PTKc_Syk_like Catalyti 100.0 5.4E-34 1.2E-38 312.5 22.0 249 815-1087 1-256 (257)
209 cd05075 PTKc_Axl Catalytic dom 100.0 5E-34 1.1E-38 315.7 21.9 255 811-1086 1-271 (272)
210 cd05095 PTKc_DDR2 Catalytic do 100.0 9.1E-34 2E-38 317.5 24.2 263 808-1085 4-296 (296)
211 cd07863 STKc_CDK4 Catalytic do 100.0 4.8E-34 1.1E-38 318.6 21.9 264 810-1081 1-284 (288)
212 cd05057 PTKc_EGFR_like Catalyt 100.0 5.3E-34 1.2E-38 316.6 22.1 263 808-1093 6-275 (279)
213 cd06615 PKc_MEK Catalytic doma 100.0 9.9E-34 2.1E-38 318.8 24.5 265 809-1082 1-287 (308)
214 cd07875 STKc_JNK1 Catalytic do 100.0 3.3E-34 7.1E-39 330.7 21.1 264 808-1081 23-317 (364)
215 cd06643 STKc_SLK Catalytic dom 100.0 3.2E-34 6.9E-39 318.9 20.0 251 809-1081 5-261 (282)
216 cd05065 PTKc_EphR_B Catalytic 100.0 4.7E-34 1E-38 315.2 21.0 256 809-1086 4-268 (269)
217 cd06624 STKc_ASK Catalytic dom 100.0 7.1E-34 1.5E-38 313.6 22.4 254 806-1081 5-264 (268)
218 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.2E-34 1.1E-38 313.2 21.0 238 816-1083 2-261 (262)
219 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.6E-34 9.9E-39 322.6 21.1 261 807-1089 10-296 (314)
220 KOG0579 Ste20-like serine/thre 100.0 1.1E-35 2.3E-40 324.6 7.4 251 809-1081 32-288 (1187)
221 cd05058 PTKc_Met_Ron Catalytic 100.0 7.2E-34 1.6E-38 312.5 22.1 252 815-1088 1-261 (262)
222 cd05050 PTKc_Musk Catalytic do 100.0 3.4E-34 7.3E-39 319.8 19.7 257 807-1085 3-288 (288)
223 PTZ00266 NIMA-related protein 100.0 2.6E-34 5.7E-39 348.5 20.1 262 805-1086 9-301 (1021)
224 cd06638 STKc_myosinIIIA Cataly 100.0 4.9E-34 1.1E-38 318.2 20.7 260 800-1082 9-283 (286)
225 cd06613 STKc_MAP4K3_like Catal 100.0 8.9E-34 1.9E-38 311.8 22.5 254 808-1081 2-259 (262)
226 PHA03211 serine/threonine kina 100.0 6.7E-34 1.4E-38 331.8 22.7 261 808-1081 168-454 (461)
227 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 8.2E-34 1.8E-38 313.3 22.2 252 815-1084 1-268 (269)
228 cd06644 STKc_STK10_LOK Catalyt 100.0 9.3E-34 2E-38 316.8 22.8 252 808-1081 11-268 (292)
229 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-33 2.4E-38 315.1 23.2 261 809-1086 4-283 (284)
230 cd06631 STKc_YSK4 Catalytic do 100.0 6.6E-34 1.4E-38 313.4 21.1 253 810-1081 1-261 (265)
231 PF00069 Pkinase: Protein kina 100.0 1.6E-34 3.6E-39 317.2 16.2 254 811-1081 1-256 (260)
232 cd06637 STKc_TNIK Catalytic do 100.0 7.1E-34 1.5E-38 314.4 21.3 251 807-1081 4-268 (272)
233 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.1E-34 1.3E-38 324.5 21.3 264 806-1091 9-298 (334)
234 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-33 2.3E-38 309.0 22.3 249 815-1085 1-251 (251)
235 cd06655 STKc_PAK2 Catalytic do 100.0 7.9E-34 1.7E-38 317.5 21.7 249 809-1081 19-268 (296)
236 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.5E-34 1.4E-38 319.5 21.0 265 809-1081 6-285 (301)
237 cd06611 STKc_SLK_like Catalyti 100.0 4.5E-34 9.8E-39 317.4 19.2 253 808-1082 4-262 (280)
238 PHA03207 serine/threonine kina 100.0 1.4E-33 3.1E-38 327.7 24.0 263 806-1082 89-375 (392)
239 cd06656 STKc_PAK3 Catalytic do 100.0 6.8E-34 1.5E-38 318.3 20.5 249 809-1081 19-268 (297)
240 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.5E-33 5.4E-38 312.6 24.7 267 809-1081 1-282 (286)
241 cd06645 STKc_MAP4K3 Catalytic 100.0 6.9E-34 1.5E-38 313.6 19.9 252 809-1081 9-264 (267)
242 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.6E-33 3.5E-38 310.6 22.9 251 810-1081 1-263 (267)
243 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.5E-34 1.4E-38 314.5 19.7 239 816-1084 2-274 (274)
244 cd07861 STKc_CDK1_euk Catalyti 100.0 8.9E-34 1.9E-38 316.0 20.9 263 810-1081 1-281 (285)
245 cd07868 STKc_CDK8 Catalytic do 100.0 2.4E-33 5.2E-38 317.5 24.7 195 814-1017 6-220 (317)
246 cd00192 PTKc Catalytic domain 100.0 1.5E-33 3.2E-38 309.8 22.3 248 815-1084 1-262 (262)
247 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-33 2.3E-38 321.5 21.7 265 813-1081 2-306 (327)
248 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-33 2.9E-38 311.6 21.9 247 816-1086 2-268 (270)
249 cd08221 STKc_Nek9 Catalytic do 100.0 2.2E-33 4.7E-38 307.5 23.3 251 810-1082 1-253 (256)
250 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.4E-33 5.2E-38 309.3 23.6 256 809-1081 1-263 (267)
251 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-33 2.7E-38 309.7 21.0 249 815-1085 1-257 (257)
252 cd07839 STKc_CDK5 Catalytic do 100.0 7.9E-34 1.7E-38 316.2 19.6 266 810-1081 1-280 (284)
253 PTZ00284 protein kinase; Provi 100.0 6.2E-34 1.3E-38 338.6 19.7 263 805-1081 125-437 (467)
254 cd08223 STKc_Nek4 Catalytic do 100.0 2.6E-33 5.6E-38 307.1 23.0 250 810-1081 1-253 (257)
255 cd05110 PTKc_HER4 Catalytic do 100.0 2.4E-33 5.2E-38 315.0 23.2 261 807-1090 5-272 (303)
256 cd06609 STKc_MST3_like Catalyt 100.0 2E-33 4.4E-38 311.1 22.1 249 809-1081 1-250 (274)
257 cd05046 PTK_CCK4 Pseudokinase 100.0 1.9E-33 4.2E-38 311.5 21.1 256 809-1085 5-275 (275)
258 KOG0983 Mitogen-activated prot 100.0 2.9E-34 6.3E-39 285.4 12.8 250 811-1081 94-348 (391)
259 cd05586 STKc_Sck1_like Catalyt 100.0 2.8E-34 6.1E-39 326.6 14.6 243 817-1081 1-252 (330)
260 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-33 5.1E-38 313.5 21.7 259 800-1081 13-286 (291)
261 KOG0690 Serine/threonine prote 100.0 3.3E-35 7.2E-40 298.2 6.0 245 807-1074 166-411 (516)
262 KOG0200 Fibroblast/platelet-de 100.0 8.7E-34 1.9E-38 342.5 19.4 262 804-1086 291-579 (609)
263 cd06640 STKc_MST4 Catalytic do 100.0 4.1E-33 8.9E-38 309.1 23.3 249 809-1082 4-253 (277)
264 cd08218 STKc_Nek1 Catalytic do 100.0 2.3E-33 5.1E-38 307.3 21.0 250 810-1081 1-252 (256)
265 KOG0986 G protein-coupled rece 100.0 1.5E-34 3.2E-39 306.7 11.0 270 808-1101 184-455 (591)
266 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.4E-34 9.6E-39 313.2 15.2 239 816-1084 2-258 (258)
267 cd07832 STKc_CCRK Catalytic do 100.0 2.5E-33 5.4E-38 312.6 21.3 266 810-1081 1-281 (286)
268 cd07844 STKc_PCTAIRE_like Cata 100.0 3.4E-33 7.4E-38 312.2 22.4 266 809-1081 5-287 (291)
269 cd06651 STKc_MEKK3 Catalytic d 100.0 5E-33 1.1E-37 306.5 23.3 252 809-1081 2-260 (266)
270 cd05609 STKc_MAST Catalytic do 100.0 2E-33 4.3E-38 316.1 20.5 258 809-1085 1-273 (305)
271 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.1E-33 6.7E-38 311.2 21.9 259 808-1086 4-270 (284)
272 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.4E-33 7.4E-38 308.9 22.0 256 810-1081 2-268 (272)
273 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.2E-33 7E-38 308.2 21.7 251 816-1084 2-267 (268)
274 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.1E-33 4.6E-38 308.2 20.1 238 815-1084 1-259 (259)
275 cd05083 PTKc_Chk Catalytic dom 100.0 2.1E-33 4.5E-38 307.2 19.9 246 809-1085 6-253 (254)
276 cd08528 STKc_Nek10 Catalytic d 100.0 3.1E-33 6.8E-38 308.7 21.5 256 810-1085 1-269 (269)
277 cd05574 STKc_phototropin_like 100.0 4.6E-33 9.9E-38 315.1 23.3 254 809-1081 1-288 (316)
278 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.6E-33 1E-37 311.1 23.0 265 807-1081 3-287 (291)
279 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.1E-33 2.4E-38 323.7 18.5 263 807-1081 13-297 (343)
280 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.6E-33 3.4E-38 314.2 19.1 267 809-1081 1-282 (286)
281 cd06605 PKc_MAPKK Catalytic do 100.0 2.6E-33 5.7E-38 308.6 20.6 252 809-1081 1-256 (265)
282 KOG0596 Dual specificity; seri 100.0 8.4E-34 1.8E-38 308.3 16.1 256 806-1081 358-626 (677)
283 smart00219 TyrKc Tyrosine kina 100.0 3.3E-33 7.2E-38 306.4 21.1 251 811-1083 1-258 (258)
284 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.6E-33 3.4E-38 312.4 18.6 248 809-1081 4-252 (277)
285 cd06607 STKc_TAO Catalytic dom 100.0 6.2E-33 1.3E-37 312.4 23.7 249 809-1082 15-267 (307)
286 cd07833 STKc_CDKL Catalytic do 100.0 2.7E-33 5.7E-38 312.7 20.4 267 809-1081 1-284 (288)
287 cd07841 STKc_CDK7 Catalytic do 100.0 4.5E-33 9.9E-38 312.4 22.4 266 810-1081 1-281 (298)
288 cd05042 PTKc_Aatyk Catalytic d 100.0 3.1E-33 6.8E-38 308.6 20.6 251 816-1084 2-268 (269)
289 cd06626 STKc_MEKK4 Catalytic d 100.0 7.6E-33 1.6E-37 304.7 23.4 253 810-1081 1-260 (264)
290 cd08220 STKc_Nek8 Catalytic do 100.0 5.5E-33 1.2E-37 304.3 22.2 249 810-1081 1-252 (256)
291 cd05580 STKc_PKA Catalytic dom 100.0 3E-33 6.6E-38 312.2 20.4 246 809-1080 1-252 (290)
292 cd07867 STKc_CDC2L6 Catalytic 100.0 9.6E-33 2.1E-37 312.7 24.7 193 815-1016 7-219 (317)
293 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.4E-33 9.6E-38 310.5 21.4 252 809-1081 1-261 (286)
294 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.7E-33 8.1E-38 310.4 20.6 258 800-1081 7-278 (282)
295 cd06632 STKc_MEKK1_plant Catal 100.0 7E-33 1.5E-37 303.9 22.1 250 810-1081 1-254 (258)
296 cd06630 STKc_MEKK1 Catalytic d 100.0 1E-32 2.2E-37 304.4 23.5 255 810-1081 1-263 (268)
297 cd06608 STKc_myosinIII_like Ca 100.0 3.9E-33 8.4E-38 309.1 20.0 252 807-1081 4-271 (275)
298 cd06652 STKc_MEKK2 Catalytic d 100.0 9.8E-33 2.1E-37 304.0 22.9 252 809-1081 2-260 (265)
299 KOG4645 MAPKKK (MAP kinase kin 100.0 6.2E-35 1.3E-39 345.3 5.6 252 809-1081 1235-1493(1509)
300 cd05044 PTKc_c-ros Catalytic d 100.0 3.9E-33 8.5E-38 308.0 19.6 249 815-1085 1-269 (269)
301 cd05578 STKc_Yank1 Catalytic d 100.0 3.7E-33 8E-38 306.1 19.2 250 810-1080 1-253 (258)
302 cd05572 STKc_cGK_PKG Catalytic 100.0 1.6E-32 3.4E-37 301.8 24.0 245 817-1081 1-251 (262)
303 KOG0612 Rho-associated, coiled 100.0 1.4E-34 3.1E-39 337.9 8.1 273 801-1102 67-348 (1317)
304 KOG0584 Serine/threonine prote 100.0 4.1E-34 8.8E-39 317.6 11.2 247 813-1081 44-295 (632)
305 cd06658 STKc_PAK5 Catalytic do 100.0 2.3E-33 5E-38 313.1 17.3 249 810-1082 23-272 (292)
306 cd08217 STKc_Nek2 Catalytic do 100.0 1.8E-32 4E-37 301.8 24.1 250 810-1081 1-261 (265)
307 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.1E-32 6.7E-37 303.6 25.9 258 809-1081 1-265 (287)
308 cd06635 STKc_TAO1 Catalytic do 100.0 2.2E-32 4.8E-37 309.2 24.9 254 810-1088 26-283 (317)
309 cd06659 STKc_PAK6 Catalytic do 100.0 4.4E-33 9.5E-38 311.6 18.8 248 811-1082 23-271 (297)
310 cd07843 STKc_CDC2L1 Catalytic 100.0 8E-33 1.7E-37 309.5 20.9 266 809-1081 5-289 (293)
311 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.2E-32 2.6E-37 304.8 21.6 255 811-1086 1-272 (273)
312 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.2E-32 2.7E-37 306.5 21.7 251 809-1081 1-260 (283)
313 cd06647 STKc_PAK_I Catalytic d 100.0 8.8E-33 1.9E-37 308.7 20.5 250 809-1082 19-269 (293)
314 KOG1024 Receptor-like protein 100.0 1.6E-33 3.4E-38 293.1 13.1 270 801-1092 276-561 (563)
315 cd06623 PKc_MAPKK_plant_like C 100.0 3.4E-32 7.3E-37 299.6 24.6 253 809-1082 1-256 (264)
316 KOG0604 MAP kinase-activated p 100.0 1.4E-33 3E-38 284.4 12.0 251 808-1081 60-321 (400)
317 cd06641 STKc_MST3 Catalytic do 100.0 2.2E-32 4.9E-37 303.1 23.1 249 809-1082 4-253 (277)
318 cd07840 STKc_CDK9_like Catalyt 100.0 1.7E-32 3.7E-37 306.0 21.8 265 811-1081 1-283 (287)
319 cd07860 STKc_CDK2_3 Catalytic 100.0 8.3E-33 1.8E-37 308.0 19.1 266 810-1081 1-280 (284)
320 cd07835 STKc_CDK1_like Catalyt 100.0 1.2E-32 2.6E-37 306.5 20.1 265 811-1081 1-279 (283)
321 cd07836 STKc_Pho85 Catalytic d 100.0 2.3E-32 5E-37 304.5 22.3 265 810-1081 1-280 (284)
322 cd06648 STKc_PAK_II Catalytic 100.0 2.2E-32 4.7E-37 304.3 22.0 248 810-1081 20-268 (285)
323 cd06917 STKc_NAK1_like Catalyt 100.0 2.7E-32 5.8E-37 302.6 22.7 248 810-1081 2-254 (277)
324 cd05577 STKc_GRK Catalytic dom 100.0 2.4E-32 5.1E-37 302.9 22.1 243 817-1078 1-245 (277)
325 cd05122 PKc_STE Catalytic doma 100.0 2.8E-32 6.1E-37 297.8 22.2 249 810-1081 1-250 (253)
326 cd07831 STKc_MOK Catalytic dom 100.0 3.8E-32 8.2E-37 302.4 23.2 261 811-1081 1-278 (282)
327 cd05633 STKc_GRK3 Catalytic do 100.0 3.3E-32 7.1E-37 301.7 22.5 244 816-1081 1-254 (279)
328 PHA03210 serine/threonine kina 100.0 1E-32 2.2E-37 328.9 19.7 269 808-1081 147-453 (501)
329 cd06614 STKc_PAK Catalytic dom 100.0 2.1E-32 4.6E-37 304.9 21.0 251 808-1081 18-269 (286)
330 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-32 4.1E-37 308.8 20.8 266 809-1081 7-289 (309)
331 KOG0666 Cyclin C-dependent kin 100.0 3.7E-33 7.9E-38 282.4 13.2 202 809-1015 24-242 (438)
332 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-32 3.1E-37 315.6 19.8 266 807-1082 14-311 (353)
333 KOG4250 TANK binding protein k 100.0 6E-33 1.3E-37 312.0 15.8 280 811-1097 15-321 (732)
334 cd07864 STKc_CDK12 Catalytic d 100.0 3.9E-32 8.5E-37 305.5 22.1 270 806-1081 4-298 (302)
335 cd08225 STKc_Nek5 Catalytic do 100.0 1.6E-32 3.4E-37 300.9 18.3 250 810-1081 1-253 (257)
336 KOG1006 Mitogen-activated prot 100.0 2.1E-34 4.5E-39 285.7 2.7 256 809-1082 64-327 (361)
337 cd05611 STKc_Rim15_like Cataly 100.0 3E-32 6.6E-37 299.2 20.1 247 815-1084 2-250 (260)
338 cd06616 PKc_MKK4 Catalytic dom 100.0 3.7E-32 8.1E-37 303.4 21.0 255 809-1082 4-267 (288)
339 cd07842 STKc_CDK8_like Catalyt 100.0 4.9E-32 1.1E-36 306.8 21.9 268 810-1081 1-312 (316)
340 PHA02882 putative serine/threo 100.0 7.1E-32 1.5E-36 301.4 22.7 261 807-1083 10-293 (294)
341 cd06634 STKc_TAO2 Catalytic do 100.0 5.3E-32 1.1E-36 304.7 21.5 252 809-1085 15-270 (308)
342 KOG1035 eIF-2alpha kinase GCN2 100.0 5E-33 1.1E-37 327.9 13.6 253 808-1081 478-870 (1351)
343 KOG0586 Serine/threonine prote 100.0 1.6E-32 3.4E-37 304.9 16.8 251 808-1083 55-307 (596)
344 cd05583 STKc_MSK_N N-terminal 100.0 4.6E-32 1E-36 302.6 20.7 258 810-1085 1-266 (288)
345 PLN00009 cyclin-dependent kina 100.0 5.5E-32 1.2E-36 302.9 21.2 264 809-1081 2-283 (294)
346 cd06633 STKc_TAO3 Catalytic do 100.0 1.3E-31 2.8E-36 302.1 24.2 246 811-1081 23-272 (313)
347 cd05613 STKc_MSK1_N N-terminal 100.0 8.9E-32 1.9E-36 300.6 22.6 254 810-1081 1-267 (290)
348 cd05579 STKc_MAST_like Catalyt 100.0 2.2E-32 4.8E-37 301.1 17.5 248 817-1084 1-256 (265)
349 cd07849 STKc_ERK1_2_like Catal 100.0 2.6E-32 5.6E-37 311.3 18.3 270 808-1086 4-298 (336)
350 KOG0696 Serine/threonine prote 100.0 1.4E-33 3.1E-38 294.5 7.0 273 806-1106 346-620 (683)
351 cd06606 STKc_MAPKKK Catalytic 100.0 2.4E-31 5.1E-36 291.8 25.0 252 810-1081 1-256 (260)
352 cd05118 STKc_CMGC Catalytic do 100.0 5.5E-32 1.2E-36 301.2 20.3 264 811-1081 1-279 (283)
353 cd08215 STKc_Nek Catalytic dom 100.0 8.2E-32 1.8E-36 295.2 21.1 250 810-1081 1-254 (258)
354 KOG0662 Cyclin-dependent kinas 100.0 1E-32 2.2E-37 257.4 11.5 263 810-1081 3-282 (292)
355 cd06618 PKc_MKK7 Catalytic dom 100.0 3.5E-32 7.5E-37 304.7 18.3 254 808-1082 14-273 (296)
356 cd07837 STKc_CdkB_plant Cataly 100.0 6.9E-32 1.5E-36 302.4 20.6 264 809-1081 1-290 (295)
357 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.4E-31 3E-36 294.5 22.5 252 809-1081 2-260 (264)
358 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.9E-32 1.3E-36 308.9 19.9 280 807-1101 13-319 (343)
359 cd06627 STKc_Cdc7_like Catalyt 100.0 1.5E-31 3.3E-36 292.5 22.3 249 810-1081 1-250 (254)
360 cd07838 STKc_CDK4_6_like Catal 100.0 1.8E-31 3.9E-36 297.7 23.3 264 811-1081 1-283 (287)
361 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-31 3.4E-36 296.2 22.5 244 816-1081 1-254 (278)
362 cd05581 STKc_PDK1 Catalytic do 100.0 3.4E-32 7.3E-37 302.4 17.1 250 809-1080 1-275 (280)
363 cd07852 STKc_MAPK15 Catalytic 100.0 6.7E-32 1.5E-36 308.2 19.9 267 808-1082 6-295 (337)
364 cd07865 STKc_CDK9 Catalytic do 100.0 1.2E-31 2.7E-36 302.7 21.7 265 809-1081 12-306 (310)
365 cd08226 PK_STRAD_beta Pseudoki 100.0 1.3E-31 2.9E-36 304.3 21.7 256 816-1081 5-307 (328)
366 cd06657 STKc_PAK4 Catalytic do 100.0 8.7E-32 1.9E-36 300.2 19.7 243 815-1081 26-269 (292)
367 cd07879 STKc_p38delta_MAPK13 C 100.0 5.1E-32 1.1E-36 309.4 18.1 270 808-1093 14-310 (342)
368 cd07830 STKc_MAK_like Catalyti 100.0 1.2E-31 2.5E-36 298.6 20.2 262 811-1081 1-279 (283)
369 cd08530 STKc_CNK2-like Catalyt 100.0 1.2E-31 2.6E-36 293.7 19.6 248 810-1081 1-252 (256)
370 cd07855 STKc_ERK5 Catalytic do 100.0 9.4E-32 2E-36 306.5 19.3 267 808-1081 4-293 (334)
371 PHA03390 pk1 serine/threonine- 100.0 5.4E-31 1.2E-35 289.9 24.6 242 807-1080 12-260 (267)
372 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.4E-32 2E-36 306.7 18.6 273 808-1089 4-300 (337)
373 KOG4236 Serine/threonine prote 100.0 1.4E-32 2.9E-37 295.1 10.3 244 814-1079 569-816 (888)
374 cd08216 PK_STRAD Pseudokinase 100.0 3.4E-31 7.4E-36 299.5 21.5 261 816-1081 9-294 (314)
375 cd07866 STKc_BUR1 Catalytic do 100.0 1.8E-31 4E-36 301.4 19.2 268 808-1081 7-307 (311)
376 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.5E-31 5.4E-36 301.5 19.7 263 806-1082 7-288 (328)
377 cd07829 STKc_CDK_like Catalyti 100.0 2.5E-31 5.5E-36 295.7 19.0 264 811-1081 1-278 (282)
378 KOG0607 MAP kinase-interacting 100.0 4.3E-32 9.3E-37 275.5 11.4 255 815-1081 84-360 (463)
379 KOG0671 LAMMER dual specificit 100.0 2.1E-32 4.5E-37 286.4 9.2 262 807-1081 87-405 (415)
380 cd07834 STKc_MAPK Catalytic do 100.0 1.7E-31 3.6E-36 304.3 17.6 268 810-1088 1-297 (330)
381 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.9E-31 6.2E-36 303.5 19.4 271 801-1082 9-300 (345)
382 PTZ00024 cyclin-dependent prot 100.0 5.6E-31 1.2E-35 300.5 20.7 267 809-1081 8-312 (335)
383 cd05610 STKc_MASTL Catalytic d 100.0 5.2E-31 1.1E-35 323.8 21.1 148 809-960 4-152 (669)
384 cd08222 STKc_Nek11 Catalytic d 100.0 4.9E-31 1.1E-35 289.6 18.2 250 810-1081 1-256 (260)
385 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-30 3.7E-35 283.5 21.6 239 817-1078 1-240 (250)
386 KOG0695 Serine/threonine prote 100.0 7.5E-32 1.6E-36 274.5 9.8 276 806-1103 247-527 (593)
387 KOG0587 Traf2- and Nck-interac 100.0 6.7E-31 1.5E-35 300.8 18.2 253 806-1081 16-281 (953)
388 cd07851 STKc_p38 Catalytic dom 100.0 2.8E-31 6.1E-36 303.4 15.0 259 808-1081 14-297 (343)
389 cd07854 STKc_MAPK4_6 Catalytic 100.0 9.4E-31 2E-35 299.0 19.2 264 809-1081 5-299 (342)
390 cd07857 STKc_MPK1 Catalytic do 100.0 2E-30 4.3E-35 295.3 21.2 272 810-1087 1-299 (332)
391 KOG0614 cGMP-dependent protein 100.0 3.3E-32 7.1E-37 291.8 4.3 245 809-1075 420-665 (732)
392 KOG0603 Ribosomal protein S6 k 100.0 5.8E-31 1.3E-35 294.2 14.2 239 808-1081 321-562 (612)
393 KOG0669 Cyclin T-dependent kin 100.0 2.3E-32 5.1E-37 268.6 1.6 265 809-1081 17-314 (376)
394 KOG1151 Tousled-like protein k 100.0 2.3E-31 5E-36 280.1 8.8 261 806-1080 460-739 (775)
395 KOG0984 Mitogen-activated prot 100.0 7.1E-31 1.5E-35 251.3 10.3 217 805-1031 42-267 (282)
396 cd05576 STKc_RPK118_like Catal 100.0 6.5E-30 1.4E-34 276.1 17.5 220 820-1077 4-224 (237)
397 KOG0668 Casein kinase II, alph 100.0 8.4E-31 1.8E-35 254.2 8.2 260 807-1081 36-321 (338)
398 KOG1290 Serine/threonine prote 100.0 1.2E-29 2.6E-34 272.2 17.8 280 786-1081 60-549 (590)
399 PLN03225 Serine/threonine-prot 100.0 3.4E-29 7.3E-34 299.5 19.7 260 807-1081 130-449 (566)
400 smart00220 S_TKc Serine/Threon 100.0 1.8E-28 3.8E-33 266.0 19.6 239 821-1081 1-240 (244)
401 KOG0608 Warts/lats-like serine 100.0 2.9E-29 6.3E-34 275.2 12.7 209 809-1021 629-879 (1034)
402 PLN03224 probable serine/threo 100.0 2.4E-28 5.2E-33 283.9 20.2 264 807-1081 143-499 (507)
403 KOG0664 Nemo-like MAPK-related 100.0 2.5E-30 5.4E-35 256.8 2.0 267 811-1084 55-345 (449)
404 KOG1027 Serine/threonine prote 100.0 1.3E-28 2.8E-33 280.9 11.5 264 811-1102 511-796 (903)
405 KOG0665 Jun-N-terminal kinase 99.9 5.3E-28 1.2E-32 247.4 11.0 262 809-1081 17-309 (369)
406 KOG0576 Mitogen-activated prot 99.9 5.9E-29 1.3E-33 275.9 4.1 252 808-1080 14-269 (829)
407 KOG1152 Signal transduction se 99.9 5.4E-28 1.2E-32 263.8 9.3 199 809-1014 561-770 (772)
408 KOG0670 U4/U6-associated splic 99.9 5.1E-28 1.1E-32 260.4 8.6 265 805-1081 428-745 (752)
409 cd00180 PKc Catalytic domain o 99.9 9.2E-26 2E-30 238.7 21.8 211 817-1082 1-214 (215)
410 smart00221 STYKc Protein kinas 99.9 2.7E-25 5.9E-30 238.0 19.8 200 811-1015 1-202 (225)
411 KOG1345 Serine/threonine kinas 99.9 3.8E-26 8.3E-31 227.6 10.2 249 809-1081 24-283 (378)
412 KOG4237 Extracellular matrix p 99.9 2.8E-27 6.1E-32 247.8 0.3 407 104-544 69-498 (498)
413 KOG1167 Serine/threonine prote 99.9 3E-25 6.5E-30 236.5 11.2 263 807-1081 34-380 (418)
414 KOG4237 Extracellular matrix p 99.9 2E-26 4.2E-31 241.5 0.5 416 237-689 60-498 (498)
415 KOG0195 Integrin-linked kinase 99.9 3.5E-25 7.5E-30 220.3 7.4 259 795-1087 183-447 (448)
416 PLN03210 Resistant to P. syrin 99.9 8.6E-24 1.9E-28 274.7 20.9 345 168-545 552-904 (1153)
417 PLN03210 Resistant to P. syrin 99.9 1E-23 2.3E-28 273.9 19.6 337 217-569 553-904 (1153)
418 PRK15387 E3 ubiquitin-protein 99.9 1E-23 2.2E-28 253.0 14.6 263 366-697 201-463 (788)
419 KOG1165 Casein kinase (serine/ 99.9 6E-23 1.3E-27 210.8 17.9 278 808-1104 27-317 (449)
420 smart00750 KIND kinase non-cat 99.9 2.4E-23 5.3E-28 213.6 15.4 169 893-1088 1-171 (176)
421 KOG1164 Casein kinase (serine/ 99.9 1.3E-22 2.9E-27 228.3 22.1 276 810-1105 19-316 (322)
422 PLN00181 protein SPA1-RELATED; 99.9 2.8E-24 6.1E-29 271.5 9.2 195 864-1081 28-264 (793)
423 PRK15387 E3 ubiquitin-protein 99.9 1.4E-23 3.1E-28 251.7 12.9 268 343-679 202-469 (788)
424 KOG1163 Casein kinase (serine/ 99.9 3E-23 6.5E-28 203.6 10.4 281 806-1105 12-303 (341)
425 PRK09188 serine/threonine prot 99.9 6.1E-22 1.3E-26 220.8 16.7 168 806-987 15-194 (365)
426 PRK15370 E3 ubiquitin-protein 99.8 2E-21 4.2E-26 235.4 11.7 183 415-619 242-428 (754)
427 PRK15370 E3 ubiquitin-protein 99.8 2.4E-21 5.2E-26 234.6 12.0 204 415-668 221-428 (754)
428 COG0515 SPS1 Serine/threonine 99.8 2.1E-19 4.5E-24 205.3 25.3 262 811-1082 2-275 (384)
429 KOG0590 Checkpoint kinase and 99.8 2.3E-21 4.9E-26 230.8 7.3 255 813-1081 322-584 (601)
430 PRK10359 lipopolysaccharide co 99.8 2.1E-20 4.5E-25 193.1 10.0 175 806-1007 28-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 7.7E-20 1.7E-24 187.9 11.7 143 814-963 2-168 (190)
432 KOG1240 Protein kinase contain 99.8 4.8E-21 1E-25 224.4 3.0 254 810-1087 24-296 (1431)
433 PF14531 Kinase-like: Kinase-l 99.8 3E-19 6.5E-24 190.1 12.3 234 810-1073 13-288 (288)
434 KOG0617 Ras suppressor protein 99.8 4.1E-21 8.8E-26 178.9 -2.1 186 96-287 27-216 (264)
435 KOG4158 BRPK/PTEN-induced prot 99.8 2.2E-19 4.7E-24 188.7 10.4 196 866-1083 274-511 (598)
436 PRK12274 serine/threonine prot 99.8 1.5E-18 3.2E-23 175.0 14.9 188 812-1015 5-209 (218)
437 cd05145 RIO1_like RIO kinase f 99.8 1.3E-18 2.8E-23 179.9 14.5 142 814-963 2-168 (190)
438 KOG0617 Ras suppressor protein 99.8 8E-21 1.7E-25 176.9 -1.9 166 458-629 29-195 (264)
439 KOG0603 Ribosomal protein S6 k 99.8 1.2E-19 2.5E-24 204.0 3.1 227 816-1076 1-232 (612)
440 KOG1023 Natriuretic peptide re 99.8 3.3E-18 7.2E-23 193.5 13.8 220 862-1090 1-228 (484)
441 cd00116 LRR_RI Leucine-rich re 99.8 4.3E-20 9.3E-25 209.3 -2.2 279 322-618 2-319 (319)
442 KOG1166 Mitotic checkpoint ser 99.8 5E-18 1.1E-22 205.0 14.3 199 803-1011 692-901 (974)
443 cd00116 LRR_RI Leucine-rich re 99.7 1.1E-19 2.4E-24 205.9 -1.9 277 298-594 2-319 (319)
444 PRK10345 hypothetical protein; 99.7 2.1E-16 4.5E-21 163.6 14.7 135 812-959 5-156 (210)
445 smart00090 RIO RIO-like kinase 99.7 1.5E-16 3.3E-21 169.2 12.8 146 809-963 28-199 (237)
446 cd05144 RIO2_C RIO kinase fami 99.7 5E-16 1.1E-20 162.1 13.0 144 806-963 12-176 (198)
447 PRK14879 serine/threonine prot 99.7 7.4E-16 1.6E-20 163.1 14.1 137 815-961 2-143 (211)
448 TIGR03724 arch_bud32 Kae1-asso 99.6 1.1E-15 2.3E-20 160.1 12.6 133 816-961 1-138 (199)
449 PLN03150 hypothetical protein; 99.6 5.3E-16 1.1E-20 188.4 11.6 155 29-185 367-526 (623)
450 PRK09605 bifunctional UGMP fam 99.6 2.8E-15 6E-20 180.6 16.2 140 808-961 332-476 (535)
451 KOG0606 Microtubule-associated 99.6 2.7E-16 5.9E-21 185.3 6.8 210 808-1076 82-306 (1205)
452 KOG1033 eIF-2alpha kinase PEK/ 99.6 2.3E-16 4.9E-21 174.4 2.7 172 882-1079 330-509 (516)
453 cd05119 RIO RIO kinase family, 99.6 1E-14 2.2E-19 151.1 12.0 139 814-963 2-165 (187)
454 cd05120 APH_ChoK_like Aminogly 99.5 2.5E-14 5.5E-19 142.6 11.6 135 813-961 2-138 (155)
455 PRK01723 3-deoxy-D-manno-octul 99.5 1.6E-13 3.5E-18 146.4 14.5 138 814-961 36-191 (239)
456 KOG0532 Leucine-rich repeat (L 99.5 4E-15 8.7E-20 164.0 -2.8 178 415-602 76-253 (722)
457 KOG0590 Checkpoint kinase and 99.5 1.2E-14 2.6E-19 173.5 0.8 254 809-1080 20-284 (601)
458 KOG0532 Leucine-rich repeat (L 99.5 4.6E-15 9.9E-20 163.6 -2.7 181 437-627 74-254 (722)
459 PLN03150 hypothetical protein; 99.4 5.4E-14 1.2E-18 170.9 5.8 112 608-720 420-533 (623)
460 COG4886 Leucine-rich repeat (L 99.4 2.6E-13 5.7E-18 158.3 8.4 204 418-630 97-301 (394)
461 COG4886 Leucine-rich repeat (L 99.4 2.8E-13 6E-18 158.0 6.6 180 510-698 116-296 (394)
462 TIGR01982 UbiB 2-polyprenylphe 99.4 1.9E-12 4E-17 150.4 12.7 143 815-963 123-308 (437)
463 KOG1266 Protein kinase [Signal 99.3 4.7E-12 1E-16 131.1 7.0 199 861-1081 120-330 (458)
464 KOG0601 Cyclin-dependent kinas 99.3 8.4E-12 1.8E-16 141.7 8.2 250 809-1081 114-378 (524)
465 PRK04750 ubiB putative ubiquin 99.3 2.8E-11 6.1E-16 141.7 12.5 144 809-963 120-315 (537)
466 KOG1259 Nischarin, modulator o 99.2 3.4E-12 7.3E-17 130.1 2.9 129 485-619 283-412 (490)
467 KOG1259 Nischarin, modulator o 99.2 3.9E-12 8.5E-17 129.7 2.2 130 533-669 283-413 (490)
468 cd05151 ChoK Choline Kinase (C 99.2 5.3E-11 1.1E-15 121.1 9.6 130 815-961 4-136 (170)
469 KOG1243 Protein kinase [Genera 99.2 1.8E-10 3.8E-15 131.8 14.4 166 830-1009 34-199 (690)
470 cd05146 RIO3_euk RIO kinase fa 99.2 3.1E-10 6.7E-15 115.2 14.5 139 815-963 3-175 (197)
471 KOG3207 Beta-tubulin folding c 99.1 1.2E-11 2.6E-16 133.2 0.4 184 483-668 118-314 (505)
472 KOG0531 Protein phosphatase 1, 99.1 1.4E-11 3E-16 143.7 -0.5 242 367-622 73-321 (414)
473 COG3642 Mn2+-dependent serine/ 99.1 1.1E-09 2.3E-14 106.5 12.4 133 816-961 3-140 (204)
474 KOG1909 Ran GTPase-activating 99.1 4E-12 8.7E-17 133.4 -4.6 183 412-618 90-310 (382)
475 COG4248 Uncharacterized protei 99.1 4.5E-09 9.7E-14 113.1 17.8 273 812-1097 14-311 (637)
476 KOG0531 Protein phosphatase 1, 99.1 3E-11 6.5E-16 140.9 1.2 197 458-668 91-290 (414)
477 KOG0606 Microtubule-associated 99.1 3E-11 6.4E-16 143.5 0.9 279 806-1110 801-1110(1205)
478 KOG4658 Apoptotic ATPase [Sign 99.1 1.4E-10 3.1E-15 143.7 6.7 299 98-421 519-826 (889)
479 KOG3087 Serine/threonine prote 99.0 1.5E-09 3.2E-14 104.6 11.3 145 813-961 11-165 (229)
480 KOG0601 Cyclin-dependent kinas 99.0 1.6E-10 3.4E-15 131.5 5.3 251 806-1086 262-518 (524)
481 KOG1909 Ran GTPase-activating 99.0 1.6E-11 3.5E-16 128.9 -3.4 89 482-570 209-310 (382)
482 cd05154 ACAD10_11_like Acyl-Co 99.0 1.9E-09 4.2E-14 115.0 12.5 143 815-961 4-206 (223)
483 KOG3207 Beta-tubulin folding c 99.0 6.8E-11 1.5E-15 127.5 0.7 138 409-547 141-284 (505)
484 PF14580 LRR_9: Leucine-rich r 99.0 2.6E-10 5.6E-15 113.4 3.9 102 485-589 41-147 (175)
485 PF14580 LRR_9: Leucine-rich r 98.9 5E-10 1.1E-14 111.4 4.1 121 439-565 20-147 (175)
486 PF08263 LRRNT_2: Leucine rich 98.9 9.5E-10 2E-14 82.1 3.5 40 33-72 2-43 (43)
487 KOG4658 Apoptotic ATPase [Sign 98.9 1.3E-09 2.7E-14 135.4 4.4 201 221-427 522-730 (889)
488 PF01163 RIO1: RIO1 family; I 98.8 2.7E-08 5.8E-13 100.9 12.5 129 824-963 1-157 (188)
489 KOG3741 Poly(A) ribonuclease s 98.7 2.8E-07 6.1E-12 102.4 17.3 166 822-1011 289-474 (655)
490 PF13855 LRR_8: Leucine rich r 98.7 9.9E-09 2.1E-13 83.9 3.6 59 487-545 2-60 (61)
491 COG0478 RIO-like serine/threon 98.7 7.9E-08 1.7E-12 99.3 10.7 140 811-963 93-253 (304)
492 PRK15123 lipopolysaccharide co 98.7 2.7E-07 5.8E-12 99.6 14.3 142 816-961 29-194 (268)
493 KOG4579 Leucine-rich repeat (L 98.7 4.1E-09 9E-14 95.9 0.3 136 559-700 28-167 (177)
494 PF13855 LRR_8: Leucine rich r 98.6 2.3E-08 5E-13 81.7 3.8 60 463-522 2-61 (61)
495 KOG1859 Leucine-rich repeat pr 98.6 1.3E-09 2.8E-14 124.1 -5.7 125 488-619 166-292 (1096)
496 COG0661 AarF Predicted unusual 98.5 2.3E-07 5.1E-12 108.2 9.6 144 815-963 131-316 (517)
497 KOG1859 Leucine-rich repeat pr 98.5 2.6E-09 5.5E-14 121.7 -6.4 126 463-595 165-292 (1096)
498 COG1718 RIO1 Serine/threonine 98.5 1.2E-06 2.7E-11 89.9 11.6 155 800-963 36-217 (268)
499 PRK09902 hypothetical protein; 98.4 4.8E-06 1E-10 84.7 14.5 140 817-961 26-179 (216)
500 PF06293 Kdo: Lipopolysacchari 98.4 3.8E-06 8.3E-11 87.8 13.7 105 853-961 56-170 (206)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-114 Score=1125.22 Aligned_cols=923 Identities=36% Similarity=0.579 Sum_probs=658.2
Q ss_pred CcchHHHHHHhHhhccCCCCCCCCCCCCCCCCCccceEEEecCCCccEEEEEeecCCCcCcccCCCCCCCCccCEEEecC
Q 001253 32 VNIEGQILLLIKSKLVDNSNYLGNWNPNDSTPCGWIGVNCTTNDFGAVVFSLNLTKMNLSGYLSPNIGGLVHLTALDLSF 111 (1114)
Q Consensus 32 ~~~~~~~ll~~k~~~~~~~~~~~~W~~~~~~~C~w~gv~C~~~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~ 111 (1114)
.++|++||++||+++.+|.+.+++|+.. .+||.|.||+|+.. .+|+.|+|+++++.|.+++.+..+++|+.|+|++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~-~~~c~w~gv~c~~~---~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~ 102 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSS-ADVCLWQGITCNNS---SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSN 102 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCC-CCCCcCcceecCCC---CcEEEEEecCCCccccCChHHhCCCCCCEEECCC
Confidence 3479999999999998888888999754 56999999999742 4688999999999999988899999999999999
Q ss_pred CcccCCCCcccC-CCCCCCEEEccCCCcccccccccccccccceeccccccccCCCCcccccCcccchhhhcccccCCCC
Q 001253 112 NQLSRNIPKEIG-NCSSLEVLNLNNNRLEAHIPKELGNLSSLTILNIYNNRISGPFPKEIGKLSALSQLVAYSNNISGSL 190 (1114)
Q Consensus 112 n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~i~~~~ 190 (1114)
|++++.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|+|++|.+.+.+|..++++++|++|++++|.+.+
T Consensus 103 n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-- 178 (968)
T PLN00113 103 NQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG-- 178 (968)
T ss_pred CccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccc--
Confidence 999888887765 888888888888888877774 456777777777777776666666555555555555555544
Q ss_pred CCCccccccccceeccccccccccCCCCCCCCccceeeccccccCCCCcccccccccccEEEecCCcccCcccccccccc
Q 001253 191 PPTLGNLKRLKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPKEIGMLKYLTDVILWGNQLSGVIPKELGNCT 270 (1114)
Q Consensus 191 p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 270 (1114)
.+|..++++++|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..+++++
T Consensus 179 ----------------------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 236 (968)
T PLN00113 179 ----------------------KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLT 236 (968)
T ss_pred ----------------------cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCC
Confidence 4555555556666666666666666666666666777776666666665565555555
Q ss_pred ccchhhcccccccCCchhhhcCCCccceeeecccccccccCccccccccccccccccccCCCCCchhhhcccccceeecc
Q 001253 271 SLETLALYDNKQVGQLPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLF 350 (1114)
Q Consensus 271 ~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~ 350 (1114)
+|++|++++|.+.+.+|..|+++++|++|+|++|.+
T Consensus 237 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l-------------------------------------------- 272 (968)
T PLN00113 237 SLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKL-------------------------------------------- 272 (968)
T ss_pred CCCEEECcCceeccccChhHhCCCCCCEEECcCCee--------------------------------------------
Confidence 555555554444444444444444444443333333
Q ss_pred cccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccccCCC
Q 001253 351 ENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKI 430 (1114)
Q Consensus 351 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 430 (1114)
++..|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|++++|.+.+..|..+..+++
T Consensus 273 ----~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~--------------- 333 (968)
T PLN00113 273 ----SGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPR--------------- 333 (968)
T ss_pred ----eccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCC---------------
Confidence 3333444555677888888888887777766666666666666666555555555554444
Q ss_pred CccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccc
Q 001253 431 PRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCN 510 (1114)
Q Consensus 431 ~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 510 (1114)
|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|..++.+++|+.|++++|++.+.+|..++.++
T Consensus 334 ---------L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~ 404 (968)
T PLN00113 334 ---------LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACR 404 (968)
T ss_pred ---------CCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCC
Confidence 44555555555555555555556666666666666666666666666666666666666666666666677
Q ss_pred cCcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCCchhhhhcccCCeeecc
Q 001253 511 ALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLS 590 (1114)
Q Consensus 511 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 590 (1114)
+|+.|+|++|++++.+|..|..+++|+.|++++|.+++.+|..+..+++|+.|+|++|++.+.+|..++ .++|+.|+++
T Consensus 405 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls 483 (968)
T PLN00113 405 SLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLS 483 (968)
T ss_pred CCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-cccceEEECc
Confidence 777777777777766677777777777777777777766666666677777777777777776666553 4678888888
Q ss_pred CccCCCcccccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcccccC
Q 001253 591 ENELSGSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLSGE 670 (1114)
Q Consensus 591 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 670 (1114)
+|++++.+|..+.++++|+.|+|++|++.+.+|..+..+++|+ .|+|++|+++|.+|..++.+++|+.|||++|+++|.
T Consensus 484 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 562 (968)
T PLN00113 484 RNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLV-SLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGE 562 (968)
T ss_pred CCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCC-EEECCCCcccccCChhHhCcccCCEEECCCCccccc
Confidence 8888888888888888888888888888888888888888888 789999999999999999999999999999999999
Q ss_pred CCCccccccccceEEeccCcccCCCCCcccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCchhhhH
Q 001253 671 IPGSFVNLSSLLGCNFSYNNLTGPIPSSQTFQNMSVNSFSGSKGLCGGPLQNCTQPPSSLPFPSGTNSPTARLGKLVAII 750 (1114)
Q Consensus 671 ip~~~~~l~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lc~~p~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~i 750 (1114)
+|..+.++++|+.+++++|+++|.+|..++|.++.+.++.||+++||.+.... .++|... .....++.+++
T Consensus 563 ~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~---~~~c~~~------~~~~~~~~~~~ 633 (968)
T PLN00113 563 IPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG---LPPCKRV------RKTPSWWFYIT 633 (968)
T ss_pred CChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccC---CCCCccc------cccceeeeehh
Confidence 99999999999999999999999999999999999999999999999753221 1222210 01111111222
Q ss_pred HHhHhhHHHHHHhhhhheecccc-eeecccccccccCcccccccCC--CCCCCHHHHHHHhcCCcCCceecccCCeEEEE
Q 001253 751 AAAIGGVSLVLITVIIYFLRQPV-EVVAPLQDKQLSSTVSDIYFPP--KEGFTFKDLVVATDNFDERFVIGRGACGTVYR 827 (1114)
Q Consensus 751 ~~~~~~~~l~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~ 827 (1114)
+++.+++++++++++++++|+++ ......+.... ......+.. ...++++++ ...|+..++||+|+||+||+
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~ 708 (968)
T PLN00113 634 CTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDG--TWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYK 708 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccccccc--cccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEE
Confidence 22222222222222222222221 11111111000 000001111 112333333 35678888999999999999
Q ss_pred EEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCC
Q 001253 828 AVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTL 906 (1114)
Q Consensus 828 ~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l 906 (1114)
|+++ +|..||||++...... ...|++.+++++|||||+++++|.+++..|+||||+++|+|.++++ .+
T Consensus 709 ~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l 777 (968)
T PLN00113 709 GKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NL 777 (968)
T ss_pred EEECCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cC
Confidence 9974 7899999998643321 1346888999999999999999999999999999999999999996 38
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccccccccCccccc
Q 001253 907 DWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAY 986 (1114)
Q Consensus 907 ~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~ 986 (1114)
+|.++..++.|+|+||+|||..+.++|+||||||+||+++.++.+++. ||.+..... .....+++.|||||++.
T Consensus 778 ~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----~~~~~~t~~y~aPE~~~ 851 (968)
T PLN00113 778 SWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----DTKCFISSAYVAPETRE 851 (968)
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----CCCccccccccCccccc
Confidence 999999999999999999997666799999999999999999888875 665543221 12236889999999999
Q ss_pred cCCCCcccchHHHHHHHHHHHhCCCCCCCCC-CCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhc
Q 001253 987 TMKVTEKCDIYSYGVVLLELLTGRAPVQPLD-QGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLC 1065 (1114)
Q Consensus 987 ~~~~~~~~DvwslGvil~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 1065 (1114)
+..++.++|||||||++|||++|+.||.... ......+|.+....... ...+.++.+........+...++.+++.+|
T Consensus 852 ~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 930 (968)
T PLN00113 852 TKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCH-LDMWIDPSIRGDVSVNQNEIVEVMNLALHC 930 (968)
T ss_pred CCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccc-hhheeCccccCCCCccHHHHHHHHHHHHhh
Confidence 9999999999999999999999999996433 23456666654433322 233344444433344556677899999999
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhccC
Q 001253 1066 TNISPFDRPTMREVVLMLSESNRRQ 1090 (1114)
Q Consensus 1066 l~~dP~~RPs~~evl~~L~~i~~~~ 1090 (1114)
|+.||++||||+||+++|+++.+..
T Consensus 931 l~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 931 TATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred CcCCchhCcCHHHHHHHHHHhhccc
Confidence 9999999999999999999986643
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-61 Score=629.69 Aligned_cols=515 Identities=36% Similarity=0.539 Sum_probs=418.4
Q ss_pred ccceeccccccccccCCCCCCCCccceeeccccccCCCCccccc-ccccccEEEecCCcccCccccccccccccchhhcc
Q 001253 200 LKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPKEIG-MLKYLTDVILWGNQLSGVIPKELGNCTSLETLALY 278 (1114)
Q Consensus 200 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 278 (1114)
++.|++++|.+++.+|..+..+++|++|+|++|++++.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|+
T Consensus 71 v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls 148 (968)
T PLN00113 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLS 148 (968)
T ss_pred EEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECc
Confidence 44444444444444444455555555555555555544554433 555555555555555554443 335556666666
Q ss_pred cccccCCchhhhcCCCccceeeecccccccccCccccccccccccccccccCCCCCchhhhcccccceeecccccccCcc
Q 001253 279 DNKQVGQLPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLFENKLTGVI 358 (1114)
Q Consensus 279 ~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 358 (1114)
+|.+.+.+|..++.+++|++|+|++|.+.+.+|..++++++|++|++++|.+.+.+|..+.++++|+.|+|++|++++.+
T Consensus 149 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 228 (968)
T PLN00113 149 NNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEI 228 (968)
T ss_pred CCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcC
Confidence 66665566666666666666666666666666666666666666666666666666666777777777777777777777
Q ss_pred cccccccccCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccccCCCCccccccC
Q 001253 359 PVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICRNT 438 (1114)
Q Consensus 359 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 438 (1114)
|..+..+++|++|++++|.+++.+|..|..+++|++|++++|++.+.+|..+..+++|++|+|++|++.+.+|..+..++
T Consensus 229 p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 308 (968)
T PLN00113 229 PYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQ 308 (968)
T ss_pred ChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCC
Confidence 77777777788888888877777777788888888888888888877888888888899999999999888898899999
Q ss_pred ccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEEec
Q 001253 439 SLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLS 518 (1114)
Q Consensus 439 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 518 (1114)
+|++|++++|.+++.+|..+..+++|+.|++++|.+.+.+|..++.+++|+.|++++|++++.+|..+..+++|+.|+++
T Consensus 309 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~ 388 (968)
T PLN00113 309 NLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILF 388 (968)
T ss_pred CCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCCchhhhhcccCCeeeccCccCCCcc
Q 001253 519 DNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELSGSI 598 (1114)
Q Consensus 519 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 598 (1114)
+|.+.+.+|..+..+++|+.|++++|++++.+|..+..++.|+.|++++|++++.+|..+..+++|+.|++++|++.+.+
T Consensus 389 ~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 468 (968)
T PLN00113 389 SNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGL 468 (968)
T ss_pred CCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcccccCCCCccccc
Q 001253 599 PVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLSGEIPGSFVNL 678 (1114)
Q Consensus 599 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l 678 (1114)
|..++ .++|+.|++++|++++.+|..+.++++|+ .|+|++|+++|.+|..++++++|++|+|++|+++|.+|.+|.++
T Consensus 469 p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 546 (968)
T PLN00113 469 PDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELM-QLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM 546 (968)
T ss_pred Ccccc-cccceEEECcCCccCCccChhhhhhhccC-EEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc
Confidence 98764 58999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred cccceEEeccCcccCCCCCc-ccccccccccccCCCCCCCC
Q 001253 679 SSLLGCNFSYNNLTGPIPSS-QTFQNMSVNSFSGSKGLCGG 718 (1114)
Q Consensus 679 ~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lc~~ 718 (1114)
++|+.|||++|+++|.+|.. ..+..+......+|.-.+.-
T Consensus 547 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~ 587 (968)
T PLN00113 547 PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSL 587 (968)
T ss_pred ccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeC
Confidence 99999999999999999964 22333444445566544433
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-47 Score=426.98 Aligned_cols=289 Identities=46% Similarity=0.781 Sum_probs=250.0
Q ss_pred CCCCCCHHHHHHHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEE
Q 001253 795 PKEGFTFKDLVVATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLY 874 (1114)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 874 (1114)
+...|+++++..|+++|...++||+|+||+||+|...+|+.||||++....... .++|..|+.++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEE
Confidence 566799999999999999999999999999999999989999999876554432 34599999999999999999999
Q ss_pred eEEEecC-ceEEEEecCCCCCHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeE
Q 001253 875 GFCYHQG-SNLLMYEYMARGSLGELLHGASS-TLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAH 952 (1114)
Q Consensus 875 ~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 952 (1114)
|||.+.+ +.++|||||++|+|.++++.... .++|.+|++||.++|+||+|||+.+.+.|+|||||++|||+|+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999988 59999999999999999997666 899999999999999999999999988999999999999999999999
Q ss_pred EeeccCceecCCCCCCccccc-cccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHH
Q 001253 953 VGDFGLAKVIDMPQSKSMSAI-AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLD--QGGDLVTWVRNF 1029 (1114)
Q Consensus 953 l~DfG~a~~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~--~~~~~~~~~~~~ 1029 (1114)
|+|||+|+..... ....... .||.+|+|||++..+..+.|+|||||||++.|++||+.|.+... ....+..|++..
T Consensus 218 lsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 218 LSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred ccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 9999999764321 2222222 79999999999999999999999999999999999998887543 334488998888
Q ss_pred HhcCCcccccccccccCCCccc-HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1030 IRNNSLVSGMLDARLNLQDEKT-VSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
+.++ ....++|+++.. ...+ .+....+..++.+|++.+|.+||+|.||+++|+.+...
T Consensus 297 ~~~~-~~~eiiD~~l~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 297 LEEG-KLREIVDPRLKE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHCc-chhheeCCCccC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 8776 556666887653 2233 26777899999999999999999999999999776543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-45 Score=385.66 Aligned_cols=252 Identities=28% Similarity=0.435 Sum_probs=212.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-ceEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG-SNLLM 886 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv 886 (1114)
++.+..+.||+|..|+||+++++ +++.+|+|++... .++...+++.+|+++++..+||+||+++|+|...+ ...++
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEee
Confidence 34556678999999999999987 7899999999433 34456788999999999999999999999999998 49999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||||++|+|+++++.. +.+++....+++.+|++||.|||.. .+||||||||+|||++..|.|||||||.++.+-..
T Consensus 157 mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 9999999999999844 6799999999999999999999963 29999999999999999999999999999876432
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC-CCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPL-DQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
...+++||..|||||.+.+..|+.++||||||++++|+++|+.||.+. ....+..+.+...+.+. .
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p---------p-- 299 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP---------P-- 299 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC---------C--
Confidence 557889999999999999999999999999999999999999999875 22233333333322221 1
Q ss_pred CCCcccH-HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTV-SHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+..+. ....++..|+..|+++||.+||+++|+++
T Consensus 300 --P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 300 --PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred --CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11222 35678999999999999999999999875
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-45 Score=405.81 Aligned_cols=263 Identities=35% Similarity=0.546 Sum_probs=218.5
Q ss_pred cCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-ceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG-SNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 887 (1114)
.++...+.||+|+||+||+|.|+....||||++......... .++|.+|+.++.+++|||||+++|+|.+.. ..++||
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 344455569999999999999994444999999877665544 778999999999999999999999999887 789999
Q ss_pred ecCCCCCHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEecCCCCCCeEECCCC-CeEEeeccCceecCC
Q 001253 888 EYMARGSLGELLHG-ASSTLDWQTRFMIALGAAEGLSYLHHDCKPR-IFHRDIKSNNILLDDKF-EAHVGDFGLAKVIDM 964 (1114)
Q Consensus 888 E~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~~Nill~~~~-~~kl~DfG~a~~~~~ 964 (1114)
|||++|+|.++++. ....+++..++.++.+||+||.|||++ + |||||||++|||++.++ ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999999999987 467999999999999999999999998 6 99999999999999997 999999999987542
Q ss_pred CCCCccccccccccccCccccc--cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAY--TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.. ...+...||+.|||||++. ...|+.|+|||||||++|||+||+.||..... ...... .+..+
T Consensus 197 ~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~---v~~~~--------- 262 (362)
T KOG0192|consen 197 SK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASA---VVVGG--------- 262 (362)
T ss_pred cc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHH---HHhcC---------
Confidence 21 3344478999999999999 66999999999999999999999999987664 222111 11111
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCC
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGH 1092 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 1092 (1114)
.++..+......+..++.+||+.||++||++.|++..|+.++.....
T Consensus 263 ---~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 263 ---LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred ---CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 01122222455788999999999999999999999999998775443
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=403.97 Aligned_cols=266 Identities=27% Similarity=0.426 Sum_probs=225.7
Q ss_pred HHHHHHHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec
Q 001253 801 FKDLVVATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ 880 (1114)
Q Consensus 801 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 880 (1114)
.+.+++..+.++..+.||+|.||+||.|.++....||+|.++..... .++|.+|+++|++++|++||+++++|..+
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 44455556677788899999999999999997779999999875432 46788999999999999999999999998
Q ss_pred CceEEEEecCCCCCHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 881 GSNLLMYEYMARGSLGELLHG-ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
+..|||||||+.|+|.++++. .+..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..|||+|||+|
T Consensus 274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLA 350 (468)
T KOG0197|consen 274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLA 350 (468)
T ss_pred CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccc
Confidence 999999999999999999986 566899999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccc
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSG 1038 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1114)
+...+..........-+..|.|||.+....++.|||||||||+||||+| |+.||..... .+..+.+ ..+
T Consensus 351 r~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-~ev~~~l----e~G----- 420 (468)
T KOG0197|consen 351 RLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-EEVLELL----ERG----- 420 (468)
T ss_pred cccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-HHHHHHH----hcc-----
Confidence 9766555555555667889999999999999999999999999999999 8888875543 2222222 221
Q ss_pred cccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccC
Q 001253 1039 MLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQ 1090 (1114)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1090 (1114)
.+-+.|..++..++++|..||+.+|++||||+.+...++++....
T Consensus 421 -------yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 421 -------YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred -------CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 112234446668999999999999999999999999999986643
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-44 Score=394.09 Aligned_cols=250 Identities=28% Similarity=0.416 Sum_probs=220.2
Q ss_pred cCCcCCceecccCCeEEEEEEe-CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVL-RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.+|...+.||+|+|++||+++. .+|+.||+|++.+.........+.+.+|+++.+.++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999998 789999999999877766677888999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+|+.++|.++++ .++.+++.+++.+.+||+.||.|||+. +|+|||||..|++++++.+|||+|||+|..+..+ .
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~-~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD-G 172 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc-c
Confidence 9999999999998 677999999999999999999999999 9999999999999999999999999999988643 4
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
+...+.+|||.|.|||++.....+..+||||+||++|.|++|++||.... ++.....+..+++
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-----vkety~~Ik~~~Y------------ 235 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-----VKETYNKIKLNEY------------ 235 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----HHHHHHHHHhcCc------------
Confidence 55678899999999999999999999999999999999999999997432 1222222332222
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..|.....+..++|.++|+.||.+|||+++|+.
T Consensus 236 -~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 236 -SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred -ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 122244557889999999999999999999985
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-44 Score=378.55 Aligned_cols=255 Identities=28% Similarity=0.384 Sum_probs=214.7
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChh----hHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNN----VDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
.+.|.+.+.||+|+||.|-+|..+ +|+.||||++.+....... ....+++|+++|++++|||||+++++|+..+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 367888999999999999999965 8999999999876544321 23446799999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC---CCeEEeeccCc
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK---FEAHVGDFGLA 959 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfG~a 959 (1114)
.|+|||||+||+|.+.+-. .+.+.+..-..+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+|
T Consensus 251 ~YmVlE~v~GGeLfd~vv~-nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVA-NKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred eEEEEEEecCccHHHHHHh-ccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchh
Confidence 9999999999999999873 44677788899999999999999999 99999999999999766 67999999999
Q ss_pred eecCCCCCCccccccccccccCccccccCCCC---cccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcc
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVT---EKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLV 1036 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~---~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1114)
+..+ ....+.+.||||.|.|||++.+..+. .++|+||+||++|-+++|.+||........+.+.+
T Consensus 327 K~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI---------- 394 (475)
T KOG0615|consen 327 KVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI---------- 394 (475)
T ss_pred hccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH----------
Confidence 9865 55677899999999999999876533 47899999999999999999998655444333332
Q ss_pred cccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+++...+....+...+..++|.+||..||++|||+.|+++
T Consensus 395 ---~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 395 ---LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ---hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 233444444455566778999999999999999999999875
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-43 Score=370.43 Aligned_cols=202 Identities=29% Similarity=0.475 Sum_probs=182.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|...+.||+|+||+||+|+++ ++..||||.+.+..- .....+.+..|+++++.++|||||++++++..++..|+||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 67888889999999999999976 689999999987654 2334566788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC------CCeEEeeccCcee
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK------FEAHVGDFGLAKV 961 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~------~~~kl~DfG~a~~ 961 (1114)
|||.||+|.++++.. +.+++.....++.|+|.||++||++ +||||||||.|||++.. -.+||+|||+|+.
T Consensus 89 EyC~gGDLs~yi~~~-~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR-GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 999999999999844 4899999999999999999999999 99999999999999865 4689999999998
Q ss_pred cCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLD 1017 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~ 1017 (1114)
+. ......+.+|++.|||||++....|+.|+|+||+|+++||+++|+.||....
T Consensus 165 L~--~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 165 LQ--PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred CC--chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 75 4455678899999999999999999999999999999999999999997543
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-43 Score=357.16 Aligned_cols=267 Identities=21% Similarity=0.319 Sum_probs=221.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+.|+...++|+|+||+||+|+.+ +|+.||||++.... +++...+-..+|++++++++|||+|.++++|......++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 46788889999999999999987 79999999997544 44566677789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||++. ++.+-+......++.+.+.+++.|++.|+.|+|++ +++||||||+|||++.+|.+||||||+|+.... ..
T Consensus 81 E~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pg 155 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PG 155 (396)
T ss_pred eecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-Cc
Confidence 99988 66666666778899999999999999999999999 999999999999999999999999999998763 44
Q ss_pred CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH----------HHHhcCCcc
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR----------NFIRNNSLV 1036 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~----------~~~~~~~~~ 1036 (1114)
...+.++.|..|+|||.+.+ ..|+..+||||+||++.||++|.+-|++..+.+.+....+ +.+..+.+.
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 45567789999999999987 7899999999999999999999999987766555544433 334455555
Q ss_pred cccccccccCCCc---ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGMLDARLNLQDE---KTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.++.-+......+ ..+.....+.+++..|++.||.+|++-+|++.
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 5553333221111 12233346889999999999999999998874
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-43 Score=368.63 Aligned_cols=270 Identities=24% Similarity=0.309 Sum_probs=220.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
-++|++.++||+|+||+||.++.+ +++.+|+|++++...-.....+...+|..++.+++||+||+++-.|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 478999999999999999999965 7899999999987765555567788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
+||+.||.|.-++++ .+.+++..+.-++..|+.||.|||+. +|||||+||+|||+|++|+++|+|||+++..- ..
T Consensus 104 ld~~~GGeLf~hL~~-eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~-~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR-EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL-KD 178 (357)
T ss_pred EeccCCccHHHHHHh-cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc-cC
Confidence 999999999999984 45788888888889999999999999 99999999999999999999999999998542 23
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
.....+++||+.|||||++.+.+|+.++|.||+|+++|||++|.+||...+ ..++.+...... ..
T Consensus 179 ~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~----~~~~~~~I~~~k----------~~- 243 (357)
T KOG0598|consen 179 GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED----VKKMYDKILKGK----------LP- 243 (357)
T ss_pred CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc----HHHHHHHHhcCc----------CC-
Confidence 445567899999999999999999999999999999999999999997543 233333322221 11
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCCCCccc
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDHDSDQK 1105 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~~ 1105 (1114)
..+.-...+..+++.+.++.||++|..+. .+.+.-..+.++..++|+.-..
T Consensus 244 --~~p~~ls~~ardll~~LL~rdp~~RLg~~------~d~~~ik~HpfF~~inW~~l~~ 294 (357)
T KOG0598|consen 244 --LPPGYLSEEARDLLKKLLKRDPRQRLGGP------GDAEEIKRHPFFKGINWEKLLA 294 (357)
T ss_pred --CCCccCCHHHHHHHHHHhccCHHHhcCCC------CChHHhhcCcccccCCHHHHHh
Confidence 11111334678899999999999997511 2222244566777777765433
No 12
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=5.6e-46 Score=387.05 Aligned_cols=484 Identities=28% Similarity=0.367 Sum_probs=394.0
Q ss_pred CccccccccceeccccccccccCCCCCCCCccceeeccccccCCCCcccccccccccEEEecCCcccCcccccccccccc
Q 001253 193 TLGNLKRLKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPKEIGMLKYLTDVILWGNQLSGVIPKELGNCTSL 272 (1114)
Q Consensus 193 ~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 272 (1114)
..++-..|+.|.+++|.+. .+-+.+.++..|.+|++.+|+++ ..|.+++.+..+..|+.++|+++ .+|++++.+.+|
T Consensus 40 ~wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l 116 (565)
T KOG0472|consen 40 NWWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISL 116 (565)
T ss_pred hhhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhh
Confidence 4444556777777777776 45556777888888888888888 78888888888888888888888 678888888888
Q ss_pred chhhcccccccCCchhhhcCCCccceeeecccccccccCccccccccccccccccccCCCCCchhhhcccccceeecccc
Q 001253 273 ETLALYDNKQVGQLPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLFEN 352 (1114)
Q Consensus 273 ~~L~Ls~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N 352 (1114)
..|+.++|.+. .+|+.++.+..|..|+..+|+++ ..|..++.+.++..+++.+|.+....|..+. ++.|+.|+..+|
T Consensus 117 ~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N 193 (565)
T KOG0472|consen 117 VKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSN 193 (565)
T ss_pred hhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchh
Confidence 88888888754 56777888888888888899888 7888888889999999999998866555555 889999999999
Q ss_pred cccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccccCCCCc
Q 001253 353 KLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPR 432 (1114)
Q Consensus 353 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 432 (1114)
.++ .+|..++.+.+|..|+|..|+|. ..| .|.+++.|++|+++.|+|.....+....++++.+|||.+|+++ ..|+
T Consensus 194 ~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pd 269 (565)
T KOG0472|consen 194 LLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPD 269 (565)
T ss_pred hhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCch
Confidence 887 66778899999999999999998 566 7999999999999999998555555668999999999999999 8899
Q ss_pred cccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccc--cccEeec--ccccCC---C-----
Q 001253 433 HICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLA--NLSTVEL--DQNQFS---G----- 500 (1114)
Q Consensus 433 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L--~~N~l~---~----- 500 (1114)
.+|-+.+|.+||+|+|.|+ ..|..++++ .|+.|-+.||.+..+-.+.+.+-+ -|++|.= ..-.++ |
T Consensus 270 e~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~ 347 (565)
T KOG0472|consen 270 EICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETA 347 (565)
T ss_pred HHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccccc
Confidence 9999999999999999999 578889999 999999999998743332222211 1222221 001111 0
Q ss_pred -C-ccc---cccccccCcEEEecCceeccCCCccccCCCC---cceeecccccccccccccccccccceE-EECcccccc
Q 001253 501 -P-IPT---EIGNCNALQRLHLSDNYFTGELPREVGNLSN---LVTFNVSSNFLTGRIPLEIFSCKMLQR-LDLSWNKFV 571 (1114)
Q Consensus 501 -~-~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~-L~Ls~N~l~ 571 (1114)
. .+. ......+.+.|++++=+++ .+|+.....-+ ....+++.|++. .+|..+..++.+.+ +++++|.+.
T Consensus 348 ~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is 425 (565)
T KOG0472|consen 348 MTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS 425 (565)
T ss_pred CCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc
Confidence 1 111 1234567899999999999 56665544433 788999999999 89999888887765 556666554
Q ss_pred CCCchhhhhcccCCeeeccCccCCCcccccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCccc
Q 001253 572 GALPREIGSLFQLELLKLSENELSGSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPEL 651 (1114)
Q Consensus 572 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~ 651 (1114)
.+|..++.+++|..|+|++|-+. .+|..++.+..|+.||+|.|+|. .+|..+..+..++ .+-.++|++....|..+
T Consensus 426 -fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lE-tllas~nqi~~vd~~~l 501 (565)
T KOG0472|consen 426 -FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLE-TLLASNNQIGSVDPSGL 501 (565)
T ss_pred -cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHH-HHHhccccccccChHHh
Confidence 99999999999999999999998 89999999999999999999998 8999999999998 57677899998878889
Q ss_pred cchhhhHhhhccCcccccCCCCccccccccceEEeccCcccCCCCC
Q 001253 652 GNLILLEYLLLNNNHLSGEIPGSFVNLSSLLGCNFSYNNLTGPIPS 697 (1114)
Q Consensus 652 ~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~ls~N~l~g~ip~ 697 (1114)
++|.+|..|||.+|.|. .||+.++++++|++|++++|++. .|.
T Consensus 502 ~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr--~Pr 544 (565)
T KOG0472|consen 502 KNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR--QPR 544 (565)
T ss_pred hhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC--CCH
Confidence 99999999999999999 88999999999999999999997 454
No 13
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.1e-46 Score=392.48 Aligned_cols=516 Identities=28% Similarity=0.382 Sum_probs=353.9
Q ss_pred cCCCCCCCEEEccCCCcccccccccccccccceeccccccccCCCCcccccCcccchhhhcccccCCCCCCCcccccccc
Q 001253 122 IGNCSSLEVLNLNNNRLEAHIPKELGNLSSLTILNIYNNRISGPFPKEIGKLSALSQLVAYSNNISGSLPPTLGNLKRLK 201 (1114)
Q Consensus 122 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~i~~~~p~~l~~l~~L~ 201 (1114)
.+.-..|+.|.+++|.+.. +-..+.+|..|.+|++.+|++. .+|.+++.+..++.|+.++|+++ .+|+.++.+.+|+
T Consensus 41 wW~qv~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~ 117 (565)
T KOG0472|consen 41 WWEQVDLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLV 117 (565)
T ss_pred hhhhcchhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhh
Confidence 4455678888999998884 5556788888899999999988 78888888888888888888888 7888888888888
Q ss_pred ceeccccccccccCCCCCCCCccceeeccccccCCCCcccccccccccEEEecCCcccCccccccccccccchhhccccc
Q 001253 202 SFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPKEIGMLKYLTDVILWGNQLSGVIPKELGNCTSLETLALYDNK 281 (1114)
Q Consensus 202 ~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 281 (1114)
.|+.++|.+. .+|+.++.+..|+.|+..+|+++ ..|..+..+.+|..|++.+|.++.. |+..-+++.|++||...|.
T Consensus 118 ~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 118 KLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSNL 194 (565)
T ss_pred hhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchhh
Confidence 8888888887 77778888888888888888888 6888888888888888888888844 4444448888888888774
Q ss_pred ccCCchhhhcCCCccceeeecccccccccCccccccccccccccccccCCCCCchhhhcccccceeecccccccCccccc
Q 001253 282 QVGQLPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLFENKLTGVIPVE 361 (1114)
Q Consensus 282 ~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 361 (1114)
.+.+|..++.+.+|..|||.+|++. .+| +|+.++.|.++.++.|++.-........+.++..|+|++|+++ ..|..
T Consensus 195 -L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde 270 (565)
T KOG0472|consen 195 -LETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDE 270 (565)
T ss_pred -hhcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchH
Confidence 5677888888888888888888887 566 7778888888888888877333333447777888888888877 55677
Q ss_pred ccccccCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcC--ccceEEEeecccccCCCCccccccCc
Q 001253 362 LTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAY--SQLWVVDLSDNHLTGKIPRHICRNTS 439 (1114)
Q Consensus 362 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~ 439 (1114)
++-+++|++||+|+|.|+ ..|..++++ +|+.|.+.+|.+..+-.+.+..= .-|++|.= .++.-.+..- .-.+
T Consensus 271 ~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs---~~~~dglS~s-e~~~ 344 (565)
T KOG0472|consen 271 ICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRS---KIKDDGLSQS-EGGT 344 (565)
T ss_pred HHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHH---hhccCCCCCC-cccc
Confidence 777777888888888877 455667777 77777777776643211111100 00111100 0000000000 0000
Q ss_pred cceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhcccc---ccEeecccccCCCCccccccccccCcE-E
Q 001253 440 LIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLAN---LSTVELDQNQFSGPIPTEIGNCNALQR-L 515 (1114)
Q Consensus 440 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~~L~~-L 515 (1114)
-..-+ ... ........+.+.+.|++++-+++ .+|+......+ ...++++.|++. .+|..+..++.+.+ +
T Consensus 345 e~~~t----~~~-~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l 417 (565)
T KOG0472|consen 345 ETAMT----LPS-ESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDL 417 (565)
T ss_pred cccCC----CCC-Ccccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHH
Confidence 00000 000 11112334566777777777777 66666655544 777888888887 67777776666554 4
Q ss_pred EecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCCchhhhhcccCCeeeccCccCC
Q 001253 516 HLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELS 595 (1114)
Q Consensus 516 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 595 (1114)
++++|.+. -+|..++.+++|..|+|++|.+. .+|.+++.+..|+.||+|.|+|. .+|..+..+..|+.+-.++|++.
T Consensus 418 ~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~ 494 (565)
T KOG0472|consen 418 VLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIG 494 (565)
T ss_pred HhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccc
Confidence 55555554 67777777888888888888777 77888888877888888888877 77777777777777777778887
Q ss_pred CcccccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcc
Q 001253 596 GSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNH 666 (1114)
Q Consensus 596 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 666 (1114)
...|..+.+|.+|++|||.+|.+. .||+.++++++|+ .|.|++|.|+ ..+..+-.......|..-+++
T Consensus 495 ~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~-hLeL~gNpfr-~Pr~~iLmkgT~aiL~ylrdr 562 (565)
T KOG0472|consen 495 SVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLR-HLELDGNPFR-QPRHQILMKGTAAILSYLRDR 562 (565)
T ss_pred ccChHHhhhhhhcceeccCCCchh-hCChhhcccccee-EEEecCCccC-CCHHHHhccChHHHHHHhccc
Confidence 555555777788888888888776 6777777777776 6777777777 323333222334444433443
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.9e-43 Score=350.29 Aligned_cols=258 Identities=23% Similarity=0.354 Sum_probs=209.6
Q ss_pred cCCcCCceecccCCeEEEEEEe-CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEe-EEEecCc-eEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVL-RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYG-FCYHQGS-NLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~l 885 (1114)
.+|++.++||+|.||+||+++. .+|..||.|.+.-.. .+....++...|+.++++++|||||++++ .+.++.. .++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 4577888999999999999995 489999999998433 34455778899999999999999999998 4444444 899
Q ss_pred EEecCCCCCHHHHhc---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeEECCCCCeEEeeccCce
Q 001253 886 MYEYMARGSLGELLH---GASSTLDWQTRFMIALGAAEGLSYLHHDCKPR--IFHRDIKSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 960 (1114)
||||++.|+|.++++ +....+++..+++++.|+++||..+|+.. +. |+||||||.||+++.+|.|||+|||+++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHh
Confidence 999999999999986 34568999999999999999999999942 24 9999999999999999999999999999
Q ss_pred ecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 961 VIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 961 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
.+.. ......+.+|||.||+||.+.+.+|+.||||||+||++|||+.-++||.+. .+.. +.+.+.++++.
T Consensus 177 ~l~s-~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~----n~~~-L~~KI~qgd~~---- 246 (375)
T KOG0591|consen 177 FLSS-KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD----NLLS-LCKKIEQGDYP---- 246 (375)
T ss_pred Hhcc-hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc----cHHH-HHHHHHcCCCC----
Confidence 8753 333445679999999999999999999999999999999999999999754 2332 23333333221
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
+-.....+..+..+|..|+.+||+.||+...+++.++.
T Consensus 247 -------~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 247 -------PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -------CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 11123455678999999999999999996555554443
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.5e-42 Score=396.36 Aligned_cols=264 Identities=28% Similarity=0.438 Sum_probs=221.0
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEE
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCY 878 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 878 (1114)
.+...+....+.||+|+||+||+|+.. +...||||.++..... ...++|++|+.+++.++|||||+++|+|.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~--~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN--QARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH--HHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 455677788889999999999999943 3467999999866543 35789999999999999999999999999
Q ss_pred ecCceEEEEecCCCCCHHHHhccC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE
Q 001253 879 HQGSNLLMYEYMARGSLGELLHGA-------------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILL 945 (1114)
Q Consensus 879 ~~~~~~lv~E~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 945 (1114)
+++..|+|+|||..|||.++|.-. ...++..+.+.||.|||.||+||.++ .+|||||.++|+||
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLV 636 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhcee
Confidence 999999999999999999999621 12388999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeccCceecCCCCCCccc-cccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHH
Q 001253 946 DDKFEAHVGDFGLAKVIDMPQSKSMS-AIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLV 1023 (1114)
Q Consensus 946 ~~~~~~kl~DfG~a~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~ 1023 (1114)
.++..|||+|||+++.+-..+++... ...-+.+|||||.+..++|+.+||||||||++||+++ |+.||......
T Consensus 637 ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~---- 712 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ---- 712 (774)
T ss_pred ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH----
Confidence 99999999999999975444443333 4456789999999999999999999999999999999 99999865532
Q ss_pred HHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccC
Q 001253 1024 TWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQ 1090 (1114)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1090 (1114)
.+-+.++.+... +.+..++.+++++|..||+..|.+||+++||-..|++.....
T Consensus 713 -EVIe~i~~g~lL------------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 713 -EVIECIRAGQLL------------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred -HHHHHHHcCCcc------------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 233334433321 223344567999999999999999999999999999987654
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=368.77 Aligned_cols=263 Identities=25% Similarity=0.346 Sum_probs=221.1
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 885 (1114)
..+|..++.||+|+|++||+|+.+ +++.||||++.+.....+...+.+..|-.+|.++ .||.|++++-.|.++...|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 367999999999999999999966 7899999999887766666677788899999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|+||+++|+|.+++++. +.+++...+.++.+|+.|++|||+. |||||||||+|||+|+||++||+|||.|+.+...
T Consensus 152 vLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 99999999999999854 6899999999999999999999999 9999999999999999999999999999877532
Q ss_pred CC----------C--ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 966 QS----------K--SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 966 ~~----------~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
.. . ....++||..|.+||++.....++.+|+|+||||+|+|+.|.+||.+..+. -.+++...
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----liFqkI~~-- 301 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----LIFQKIQA-- 301 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----HHHHHHHH--
Confidence 11 1 124589999999999999999999999999999999999999999765432 22222111
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCCCC
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDHDS 1102 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~ 1102 (1114)
-. .+.+......+.+++.+.|..||.+|+|..||. .+.+|..+||+.
T Consensus 302 --------l~----y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk----------~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 302 --------LD----YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIK----------AHPFFEGVDWEN 348 (604)
T ss_pred --------hc----ccCCCCCCHHHHHHHHHHHccCccccccHHHHh----------hCcccccCChhh
Confidence 11 222333335688999999999999999996543 356778888876
No 17
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-40 Score=331.31 Aligned_cols=268 Identities=23% Similarity=0.335 Sum_probs=211.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|...+++|+|.||.||+|++. +|+.||||+++.....+ .......+|++.++.++|+||+.++++|.+.+...+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 46788889999999999999964 89999999998764432 23445678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|||+. +|+..+++....++..++..++.++++|++|+|++ .|+|||+||.|+|++++|.+||+|||+|+.+..+..
T Consensus 81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 99987 99999998888999999999999999999999999 999999999999999999999999999999875544
Q ss_pred CccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHh--cCCc--ccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIR--NNSL--VSGMLDA 1042 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~ 1042 (1114)
... ..+-|..|+|||.+.+. .|+..+||||.||++.||+-|.+-|++..+-+++...++-.-. .+.+ +..+-|-
T Consensus 157 ~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 157 IQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred ccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 332 33789999999999875 5999999999999999999998777655544444333332110 0000 0000000
Q ss_pred -cccCC-----CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1043 -RLNLQ-----DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1043 -~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
.+... ..........+.+++..++..||.+|+++.|+++.
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 00000 00122334567999999999999999999998753
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=363.94 Aligned_cols=267 Identities=21% Similarity=0.282 Sum_probs=214.9
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecC-ce
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQG-SN 883 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~ 883 (1114)
..++|.++++||.|.||.||+|+.+ +|+.||||++++.....++. .-.+|++.++++. |||||++.+++.+.+ ..
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~--~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC--MNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH--HHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 3478999999999999999999965 78999999998776653322 2347999999998 999999999999888 89
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|+|||||+. +|++++++++..+++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+||.+.
T Consensus 86 ~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 999999987 99999999989999999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCCccccccccccccCccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC---ccc-c
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS---LVS-G 1038 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~-~ 1038 (1114)
.. ...+.++.|..|+|||++. ..-|+.+.||||+|||++|+.+-++-|++..+.+++.+... .+.... +.. .
T Consensus 162 Sk--pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~-VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 162 SK--PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICE-VLGTPDKDSWPEGY 238 (538)
T ss_pred cC--CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHH-HhCCCccccchhHH
Confidence 33 3345678999999999875 56689999999999999999999999987766555444332 221111 000 0
Q ss_pred cccccccCCCc----c-----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1039 MLDARLNLQDE----K-----TVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1039 ~~~~~~~~~~~----~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
-....+..+.+ . ......+..+++.+|+.|||.+||||+|.++.
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00111111111 1 11255678999999999999999999999874
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-40 Score=354.83 Aligned_cols=266 Identities=27% Similarity=0.347 Sum_probs=215.4
Q ss_pred hcCCcCCceecccCCeEEEEEEe-CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--CceE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVL-RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSNL 884 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 884 (1114)
.+.|+.+++||+|.||.||+|++ .+|+.||+|++..+..... ......+||.++++++||||+++.+...+. +..|
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~-~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEG-FPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCc-chHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 35688888999999999999996 4899999999987664332 244567899999999999999999998876 6899
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
||+|||+. ||.-++....-.+++.++..++.|+++||+|+|++ ||+|||||.+|||||.+|.+||+|||+|+++..
T Consensus 195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99999988 99999987777999999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc--
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD-- 1041 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1041 (1114)
......+..+-|..|+|||.+.+. .|+.++|+||.|||+.||+.|++.|.+..+.+.+..+++-. +...+..+.
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklc---GSP~e~~W~~~ 347 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLC---GSPTEDYWPVS 347 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHh---CCCChhccccc
Confidence 666667888999999999999875 59999999999999999999999998766544444333321 111111111
Q ss_pred -----ccccCCCcc-------cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 -----ARLNLQDEK-------TVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 -----~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+...... ........++++..+|..||.+|.||.++++
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 011111111 1112246788999999999999999998874
No 20
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=374.34 Aligned_cols=261 Identities=25% Similarity=0.406 Sum_probs=221.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
....+.++||.|.||.||+|+++ ....||||.++..... ....+|..|+.+|.+++||||+++.|+.......+
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyte--kqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTE--KQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccH--HHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeE
Confidence 44567789999999999999986 2457999999876654 44778999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+|.|||++|+|+.+|+.+++.+++.+...|.++||.||.||..+ ++|||||.++|||++.+-.+|++|||+++...+
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999999999998754
Q ss_pred CCCCccccc--cccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 965 PQSKSMSAI--AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 965 ~~~~~~~~~--~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
+.....++. .-+.+|.|||.+...+++.+||||||||++||.++ |..||.++.. .+..+.+.+.
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-QdVIkaIe~g------------ 850 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEQG------------ 850 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-HHHHHHHHhc------------
Confidence 443333332 34579999999999999999999999999999877 9999986553 2222332221
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCC
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQG 1091 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 1091 (1114)
.+-+.+.+++..+.++|..||++|-.+||.+.||+..|.++.+.-.
T Consensus 851 ----yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 851 ----YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred ----cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 1233455666789999999999999999999999999999865433
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-40 Score=347.28 Aligned_cols=261 Identities=25% Similarity=0.363 Sum_probs=211.4
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|++..+||.|..++||+|+.. .++.||||++.-+..... .+.+++|+..++.++||||++++..|..+...|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 478999999999999999999964 789999999987665443 67899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 887 YEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|.||.+|++.++++.. ...+++..+..|.+++++||.|||.+ |.||||||+.|||++++|.|||+|||.+..+...
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999999999743 44799999999999999999999999 9999999999999999999999999988755433
Q ss_pred CCCc---cccccccccccCccccc--cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 966 QSKS---MSAIAGSYGYIAPEYAY--TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 966 ~~~~---~~~~~g~~~y~aPE~~~--~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
..+. ..+++||+.|||||++. ...|+.|+||||||++..|+.+|..||...++-..+...+ ......-.+
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL----qn~pp~~~t- 254 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL----QNDPPTLLT- 254 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh----cCCCCCccc-
Confidence 2211 15679999999999954 3569999999999999999999999998766433222222 221110000
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
-....+........+.+++..|++.||.+|||++++++
T Consensus 255 ---~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 255 ---SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ---ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00111222233447889999999999999999999874
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=363.50 Aligned_cols=250 Identities=25% Similarity=0.363 Sum_probs=212.2
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
...|+...+||+|+.|.||.|+.. +++.||||++....... .+-+..|+.+|+..+|+|||.+++.|..++..++|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 356888889999999999999954 78899999997655443 45678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||||+||+|.|.+.. ..+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+....
T Consensus 349 MEym~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred EeecCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 999999999999973 4599999999999999999999999 99999999999999999999999999999875333
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
....+.+|||+|||||++....|++|+||||||++++||+.|++||-.... .+.+.-...++. +
T Consensus 424 -~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P----lrAlyLIa~ng~-------P---- 487 (550)
T KOG0578|consen 424 -SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRALYLIATNGT-------P---- 487 (550)
T ss_pred -CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh----HHHHHHHhhcCC-------C----
Confidence 356788999999999999999999999999999999999999999974322 222222222211 1
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+...+......+.+|+.+||..||++||+++|+++
T Consensus 488 ~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 488 KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 12234445568999999999999999999999985
No 23
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-40 Score=391.35 Aligned_cols=269 Identities=29% Similarity=0.445 Sum_probs=220.8
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC--CCc----EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR--TGH----TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ 880 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 880 (1114)
.....+..+.||+|+||.||+|... +|. .||||.+++... .....+|.+|..+|+.++|||||+++|+|.+.
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~--~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS--EQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC--HHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 3566777889999999999999965 343 488888876554 34477899999999999999999999999999
Q ss_pred CceEEEEecCCCCCHHHHhccC------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEe
Q 001253 881 GSNLLMYEYMARGSLGELLHGA------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVG 954 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 954 (1114)
...++++|||++|+|..++++. ...++..+.+.++.+||+|+.||+++ ++|||||.++|+|+++...|||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 9999999999999999999976 56899999999999999999999999 99999999999999999999999
Q ss_pred eccCceecCCCCCCccc-cccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhc
Q 001253 955 DFGLAKVIDMPQSKSMS-AIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRN 1032 (1114)
Q Consensus 955 DfG~a~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 1032 (1114)
|||+|+.+......... ...-+.+|||||.+..+.++.|+|||||||++||++| |..||......+-+..+.+ .
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~----g 920 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE----G 920 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh----C
Confidence 99999954333333322 2345689999999999999999999999999999999 8899986654332222222 1
Q ss_pred CCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCccccc
Q 001253 1033 NSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSP 1097 (1114)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~ 1097 (1114)
.++ +.+..+...++++|..||+.+|++||++..+++.+.++.......+..+
T Consensus 921 ---------gRL----~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~~~ 972 (1025)
T KOG1095|consen 921 ---------GRL----DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIYGP 972 (1025)
T ss_pred ---------Ccc----CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCcccc
Confidence 122 2333445578899999999999999999999999998866554444333
No 24
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-40 Score=351.94 Aligned_cols=258 Identities=30% Similarity=0.410 Sum_probs=207.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC--ceEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG--SNLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 885 (1114)
.++...+.||+|+||+||++... +|+..|||.+....... .+.+++|+.++++++|||||+.+|...... ..++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~---~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT---SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh---HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 45777889999999999999976 58999999987653221 566889999999999999999999855544 5889
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-CCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD-KFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG~a~~~~~ 964 (1114)
.|||+++|+|.+++.+.+..+++..+...++||++||+|||++ |||||||||+|||++. ++.+||+|||+++....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 9999999999999997666899999999999999999999999 9999999999999999 79999999999987652
Q ss_pred --CCCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 965 --PQSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 965 --~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
........+.||+.|||||++... ....++||||+||++.||+||++||... .....++-...... .
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~---~~~~~~~~~ig~~~-~------ 240 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF---FEEAEALLLIGRED-S------ 240 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh---cchHHHHHHHhccC-C------
Confidence 222334567899999999999953 3345999999999999999999999753 11222222211111 0
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
.+..+........+|+.+|+..||++||||+++++----..
T Consensus 241 -----~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 241 -----LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred -----CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 01223334557889999999999999999999988665443
No 25
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=362.20 Aligned_cols=277 Identities=28% Similarity=0.407 Sum_probs=224.0
Q ss_pred HHHHHHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC
Q 001253 802 KDLVVATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 802 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 881 (1114)
+++++..+++.+...||+|.||+||+|+|. ..||||++.......+ ..+.|+.|+.++++-+|.||+-+.|||..+.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 566677788888999999999999999997 3699999987766544 6789999999999999999999999999877
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
. .+|+.||+|.+|+.+++.....++..+.+.||+|||+||.|||.+ +|||||+|..||++.++++|||+|||++..
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred e-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceee
Confidence 7 999999999999999998888999999999999999999999999 999999999999999999999999999975
Q ss_pred cCCC-CCCccccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccc
Q 001253 962 IDMP-QSKSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVS 1037 (1114)
Q Consensus 962 ~~~~-~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1114)
...- .........|...|||||+++ ..+|++.+||||||+++|||++|..||.. . ..+..-|.. ..+-.
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~-~~dqIifmV---GrG~l-- 610 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-Q-NRDQIIFMV---GRGYL-- 610 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-C-ChhheEEEe---ccccc--
Confidence 4322 122233445788999999986 45799999999999999999999999982 2 222211111 11100
Q ss_pred ccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccC
Q 001253 1038 GMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPM 1098 (1114)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~ 1098 (1114)
.++. ......+..++.+++..||..++++||.+.+|+..|+++.....+...+++
T Consensus 611 ---~pd~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS~S 665 (678)
T KOG0193|consen 611 ---MPDL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRSAS 665 (678)
T ss_pred ---Cccc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccCcC
Confidence 1111 111223445788999999999999999999999999999776545444443
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=331.97 Aligned_cols=264 Identities=22% Similarity=0.281 Sum_probs=215.6
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..+.||.|+||+|.+++.+ +|..+|+|++.+...-.....+....|..+++.+.||+++++++.|.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56888899999999999999987 78999999998776555445566778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||++||.|..++++ .+++++..++-+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||+|+.+.
T Consensus 124 eyv~GGElFS~Lrk-~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~---- 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK-SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVS---- 195 (355)
T ss_pred eccCCccHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEec----
Confidence 99999999999984 45789999999999999999999999 99999999999999999999999999999864
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
....+.||||.|+|||++...+|..++|.|||||++|||+.|.+||.....-.. .+.+- .+.
T Consensus 196 ~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i-----Y~KI~---------~~~---- 257 (355)
T KOG0616|consen 196 GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI-----YEKIL---------EGK---- 257 (355)
T ss_pred CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH-----HHHHH---------hCc----
Confidence 235678999999999999999999999999999999999999999986543111 11111 111
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhccCCCcccccCCCCCcc
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRP-TMREVVLMLSESNRRQGHFEFSPMDHDSDQ 1104 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~~~~~~~~~~~~~~~ 1104 (1114)
-.++......+.+++...++.|-.+|- ++. ...+..-.+.++..++|+.--
T Consensus 258 v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlk------nG~~dIk~H~wF~~v~W~~i~ 309 (355)
T KOG0616|consen 258 VKFPSYFSSDAKDLLKKLLQVDLTKRFGNLK------NGVEDIKNHPWFKGVDWEAIL 309 (355)
T ss_pred ccCCcccCHHHHHHHHHHHhhhhHhhhcCcC------CCccccccCcccccccHHHHh
Confidence 223334445678899999999988882 211 123334455566666665433
No 27
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-40 Score=367.72 Aligned_cols=269 Identities=26% Similarity=0.374 Sum_probs=220.6
Q ss_pred HHHHHhcCCcCCceecccCCeEEEEEEeCC--C---cEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEE
Q 001253 803 DLVVATDNFDERFVIGRGACGTVYRAVLRT--G---HTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFC 877 (1114)
Q Consensus 803 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~--g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 877 (1114)
.|+...++....++||+|+||.||+|+++. + ..||||..+...........+|..|+++++.++|||||+++|++
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 344556677777899999999999999762 2 23899998865555566788899999999999999999999999
Q ss_pred EecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeecc
Q 001253 878 YHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFG 957 (1114)
Q Consensus 878 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 957 (1114)
..+...++|||+|.||+|.+++++....++..++..++.++|+||+|||++ +++||||.++|+|++.++.+||+|||
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccc
Confidence 999999999999999999999998887899999999999999999999999 99999999999999999999999999
Q ss_pred CceecCCCCCCccc-cccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCc
Q 001253 958 LAKVIDMPQSKSMS-AIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSL 1035 (1114)
Q Consensus 958 ~a~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1114)
+++... ...... ...-+.+|+|||.+....|+.++|||||||++||+++ |..||.+.... .++..+..+.+
T Consensus 308 Ls~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-----~v~~kI~~~~~ 380 (474)
T KOG0194|consen 308 LSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-----EVKAKIVKNGY 380 (474)
T ss_pred cccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-----HHHHHHHhcCc
Confidence 998643 111111 2236789999999999999999999999999999999 88899865532 23333311111
Q ss_pred ccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCC
Q 001253 1036 VSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGH 1092 (1114)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 1092 (1114)
. -..+......+..++.+||..+|++||+|.++.+.++.+......
T Consensus 381 r-----------~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 381 R-----------MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred c-----------CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 1 111223344677888899999999999999999999998666443
No 28
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.5e-39 Score=351.49 Aligned_cols=275 Identities=26% Similarity=0.305 Sum_probs=218.2
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
..++|+...+||+|+||.||.|+-+ +|+.+|+|++++.........+.++.|-.+|...++|.||+++-.|++.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999966 799999999998876655567778899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC-
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM- 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~- 964 (1114)
||||++||++..+|. ..+.+++..+...+.+.+-|++.+|.. |+|||||||+|+|||..|++||+|||++.-+..
T Consensus 219 iMEylPGGD~mTLL~-~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM-RKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHH-hcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 999999999999998 455888888888888999999999999 999999999999999999999999999852210
Q ss_pred ---------------------CCCC------------------------ccccccccccccCccccccCCCCcccchHHH
Q 001253 965 ---------------------PQSK------------------------SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSY 999 (1114)
Q Consensus 965 ---------------------~~~~------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dvwsl 999 (1114)
+... .....+|||.|||||++.+..|+..+|.||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0000 0112479999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 001253 1000 GVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREV 1079 (1114)
Q Consensus 1000 Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1079 (1114)
|||+|||+.|.+||.+....+.+...+.- ..-+. .+.......+..++|.+|+. ||++|.....+
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nw------------r~~l~--fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~ 439 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNW------------RETLK--FPEEVDLSDEAKDLITRLLC-DPENRLGSKGA 439 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHH------------hhhcc--CCCcCcccHHHHHHHHHHhc-CHHHhcCcccH
Confidence 99999999999999865543332222111 11111 22222333678899999999 99999873221
Q ss_pred HHHHHhhhccCCCcccccCCCCCccccc
Q 001253 1080 VLMLSESNRRQGHFEFSPMDHDSDQKLE 1107 (1114)
Q Consensus 1080 l~~L~~i~~~~~~~~~~~~~~~~~~~~~ 1107 (1114)
++ .-.+.+|..++|+.--+.+
T Consensus 440 ----~E---IK~HPfF~~v~W~~l~~~~ 460 (550)
T KOG0605|consen 440 ----EE---IKKHPFFKGVDWDHLREMP 460 (550)
T ss_pred ----HH---HhcCCccccCCcchhhcCC
Confidence 11 1245677777777655444
No 29
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-41 Score=363.51 Aligned_cols=398 Identities=23% Similarity=0.181 Sum_probs=340.5
Q ss_pred cccccccccCCCCCchhhhcccccceeecccccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCC
Q 001253 321 LEIDFSENSLIGEIPVELSKILGLELLYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDN 400 (1114)
Q Consensus 321 ~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 400 (1114)
+.||+++|.+...-+..|.++++|+.++|.+|.++ .+|.......+|+.|+|.+|.|+..-.+.+..++.|+.|||+.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 45888888888777888888888888888888888 55655555667888888888888777778888888888888888
Q ss_pred cccCCCCCCCCcCccceEEEeecccccCCCCccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCc
Q 001253 401 SLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPS 480 (1114)
Q Consensus 401 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 480 (1114)
.|+.+.-..|..-.++++|+|++|.|+..-...|..+.+|..|.|++|+++...+..|.++++|+.|+|..|+|.-..--
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l 239 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL 239 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhh
Confidence 88877777787778899999999999988888888888999999999999977777888899999999999998855467
Q ss_pred hhhccccccEeecccccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccc
Q 001253 481 DLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKML 560 (1114)
Q Consensus 481 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 560 (1114)
.|.+|++|+.|.|..|.|+..--..|..|.++++|+|+.|+++..-..++-+|+.|+.|+||+|.|...-++.+.-+++|
T Consensus 240 tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL 319 (873)
T KOG4194|consen 240 TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL 319 (873)
T ss_pred hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc
Confidence 88999999999999999997778889999999999999999998888899999999999999999997777888889999
Q ss_pred eEEECccccccCCCchhhhhcccCCeeeccCccCCCcccccccccccccccccCCCcCCCCCC---hhhcCcchhhHHhh
Q 001253 561 QRLDLSWNKFVGALPREIGSLFQLELLKLSENELSGSIPVQIGNLSRLTELQMGGNSFSGGIP---AELGSLSSLQIALN 637 (1114)
Q Consensus 561 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~~L~ 637 (1114)
++||||+|+|+...+.+|..|.+|++|+|++|.++-.-...|..+++|++|||++|.|++.|- ..|..|++|+ .|.
T Consensus 320 ~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr-kL~ 398 (873)
T KOG4194|consen 320 KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR-KLR 398 (873)
T ss_pred eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh-hee
Confidence 999999999998888999999999999999999997667788999999999999999987653 4577899998 799
Q ss_pred cccccccccCCccccchhhhHhhhccCcccccCCCCccccccccceEEeccCcccCCCCCcccccccccccccCC-CCCC
Q 001253 638 LSYNNLSGLIPPELGNLILLEYLLLNNNHLSGEIPGSFVNLSSLLGCNFSYNNLTGPIPSSQTFQNMSVNSFSGS-KGLC 716 (1114)
Q Consensus 638 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n-~~lc 716 (1114)
|-+|+|....-..|..+..||+|||.+|.|-.+-|..|..+ .|+.|-++.-++-|.+-..|-.+|+-...+... ...|
T Consensus 399 l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql~Wl~qWl~~~~lq~sv~a~C 477 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQLKWLAQWLYRRKLQSSVIAKC 477 (873)
T ss_pred ecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccHHHHHHHHHhcccccceeeec
Confidence 99999997766799999999999999999999999999999 899999988888888877776666655444322 3578
Q ss_pred CCCCC
Q 001253 717 GGPLQ 721 (1114)
Q Consensus 717 ~~p~~ 721 (1114)
+.|-.
T Consensus 478 ayPe~ 482 (873)
T KOG4194|consen 478 AYPEP 482 (873)
T ss_pred cCCcc
Confidence 87754
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-40 Score=349.73 Aligned_cols=249 Identities=27% Similarity=0.387 Sum_probs=209.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
..|+....||+|+||.||+|.+. +++.||+|++.-....+ ...++++|+.++..++++||.++|+.|..+...+++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d--eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED--EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcch--hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 45777789999999999999965 78999999997655433 3667889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|||.||++.+.++ .+..+++.....+.+++..|+.|+|++ +.+|||||+.||++..+|.||++|||.+........
T Consensus 91 ey~~gGsv~~lL~-~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 91 EYCGGGSVLDLLK-SGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHhcCcchhhhhc-cCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 9999999999998 334558888889999999999999999 999999999999999999999999999988754433
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.. .+++|||.|||||++.+..|+.|+||||+|++.+||.+|.+|+....+-.-+ .+..+. ..
T Consensus 167 rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl---------------flIpk~--~P 228 (467)
T KOG0201|consen 167 RR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL---------------FLIPKS--AP 228 (467)
T ss_pred cc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE---------------EeccCC--CC
Confidence 33 7899999999999999999999999999999999999999999865541110 000111 11
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+.........+.+|+..|++.||+.||+|+++++
T Consensus 229 P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 229 PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 1112244557889999999999999999998865
No 31
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-40 Score=353.95 Aligned_cols=242 Identities=32% Similarity=0.486 Sum_probs=204.8
Q ss_pred CcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecC
Q 001253 811 FDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
+...+-||.|+.|.||.|+++ ++.||||+++.-. +.+++-+++++||||+.+.|+|.....+|+|||||
T Consensus 126 IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk----------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK----------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhhhhccCcccceeeeecc-CceehhHHHhhhh----------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 334456999999999999998 7899999985332 35888999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcc
Q 001253 891 ARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSM 970 (1114)
Q Consensus 891 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 970 (1114)
..|-|...++ .+..++......+..+||.||.|||.+ +|||||||.-||||..+..|||+|||-++.... ....
T Consensus 195 a~GqL~~VLk-a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~--~STk 268 (904)
T KOG4721|consen 195 AQGQLYEVLK-AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSD--KSTK 268 (904)
T ss_pred ccccHHHHHh-ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhh--hhhh
Confidence 9999999998 456788899999999999999999999 999999999999999999999999999987653 2455
Q ss_pred ccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcc
Q 001253 971 SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEK 1050 (1114)
Q Consensus 971 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1114)
..++||+.|||||++...+.+.|+|||||||++|||+||..||...+...- + -++-.-. +.-..
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----I----------wGVGsNs--L~Lpv 332 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----I----------WGVGSNS--LHLPV 332 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee----E----------EeccCCc--ccccC
Confidence 678999999999999999999999999999999999999999976553211 0 0110111 12334
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1051 TVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1051 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
+..+...+.-+++.||+..|..||+|++++.-|+-
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 45566678889999999999999999999988854
No 32
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=361.93 Aligned_cols=365 Identities=22% Similarity=0.210 Sum_probs=305.7
Q ss_pred cchhhcccccccCCchhhhcCCCccceeeecccccccccCccccccccccccccccccCCCCCchhhhcccccceeeccc
Q 001253 272 LETLALYDNKQVGQLPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLFE 351 (1114)
Q Consensus 272 L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~ 351 (1114)
-+.|++++|++...-+..|.++++|+++++.+|.++ .||...+...+++.|+|.+|.|...-...+..++.|++|||+.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 356888888888888888888999999999999987 7888777777899999999998888888888899999999999
Q ss_pred ccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccccCCCC
Q 001253 352 NKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIP 431 (1114)
Q Consensus 352 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 431 (1114)
|.|+.+.-..|..-.++++|+|++|+|+..-...|..+.+|..|.|+.|+++...+..|..+++|+.|||..|+|.-.--
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 99998777888887889999999999998888889999999999999999988888888889999999999998874445
Q ss_pred ccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCcccccccccc
Q 001253 432 RHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNA 511 (1114)
Q Consensus 432 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 511 (1114)
-.|.++++|+.|.|..|.+...-...|..+.++++|+|+.|++...-..++.+|+.|+.|+||+|.|..+-++.+..+++
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftqk 318 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQK 318 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhccc
Confidence 67888889999999999888777777888899999999999988777888888999999999999998888888888889
Q ss_pred CcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCCch---hhhhcccCCeee
Q 001253 512 LQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPR---EIGSLFQLELLK 588 (1114)
Q Consensus 512 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~ 588 (1114)
|+.||||+|+|+...+++|..|..|+.|+|++|++...-...|..+++|+.|||++|.+++.+.+ .|..|++|+.|+
T Consensus 319 L~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~ 398 (873)
T KOG4194|consen 319 LKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR 398 (873)
T ss_pred ceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee
Confidence 99999999999888888888888899999999988854455566788888888888888876543 466678888888
Q ss_pred ccCccCCCcccccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcc
Q 001253 589 LSENELSGSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLS 639 (1114)
Q Consensus 589 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls 639 (1114)
|.+|+|..+...+|..+..|+.|||.+|.|...-|..|..+ .|+ .|-++
T Consensus 399 l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk-~Lv~n 447 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELK-ELVMN 447 (873)
T ss_pred ecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhh-hhhhc
Confidence 88888886666778888888888888888877777777777 666 45543
No 33
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=363.04 Aligned_cols=246 Identities=26% Similarity=0.330 Sum_probs=209.6
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 884 (1114)
.-++|...++||+|+||+|+++..+ +++.+|||++++...-..+..+..+.|.+++... +||.++.++.+|+..++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3478999999999999999999987 7889999999998776666677788888888777 5999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+||||+.||++..+.+ .+.+++..+.-+|..|+.||+|||++ +|||||||.+|||+|.+|.+||+|||+++.. +
T Consensus 446 fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~-m 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEG-M 519 (694)
T ss_pred EEEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccccc-C
Confidence 9999999999544443 56899999999999999999999999 9999999999999999999999999999863 2
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
.......+++|||.|||||++.+..|+.++|.|||||++|||+.|..||++.++.+. .+. .+
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~-Fds-----------------I~ 581 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV-FDS-----------------IV 581 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHH-----------------Hh
Confidence 344567889999999999999999999999999999999999999999986543221 111 11
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
.....++.-...+...++++++..+|++|..+
T Consensus 582 ~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 582 NDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred cCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11223444455678899999999999999877
No 34
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2e-39 Score=351.35 Aligned_cols=248 Identities=25% Similarity=0.386 Sum_probs=212.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|.+.+.||+|+||+||||+.+ +.+.||+|.+.+...... ..+.+++|++++++++|||||.++++|+...+.++|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k-~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEK-ELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchH-HHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 46777888999999999999977 789999999987765443 3567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+.| +|..++. ..+.++++.+..++.+++.||.|||+. +|.|||+||+|||++..+++|+||||+|+.+.. ..
T Consensus 81 e~a~g-~L~~il~-~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t 154 (808)
T KOG0597|consen 81 EYAVG-DLFTILE-QDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NT 154 (808)
T ss_pred hhhhh-hHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-Cc
Confidence 99988 9999998 456899999999999999999999999 999999999999999999999999999998653 33
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......|||.|||||.+.+.+|+..+|+||+||++||+++|++||... .+.+.++....+.
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~----si~~Lv~~I~~d~-------------- 216 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR----SITQLVKSILKDP-------------- 216 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH----HHHHHHHHHhcCC--------------
Confidence 4445678999999999999999999999999999999999999999742 2233333322221
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+..++...+..||.+|.+..+++.
T Consensus 217 v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 217 VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1223355667889999999999999999998763
No 35
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-39 Score=348.42 Aligned_cols=266 Identities=24% Similarity=0.388 Sum_probs=217.6
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
.+.....++++||+|.||.|.+|....+..||||+++..... ...++|.+|+++|.+++|||||.++|+|..++..++
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm 612 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK--NARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM 612 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccch--hHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence 455677788899999999999999987899999999876543 336889999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGASS-TLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
|+|||++|+|.+++..+.. ..+.....+|+.|||.||+||.+. ++||||+.++|+|++.++++||+|||+++.+-.
T Consensus 613 I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccccc
Confidence 9999999999999986533 235666778999999999999998 999999999999999999999999999995433
Q ss_pred CCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh--CCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 965 PQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT--GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 965 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
.+. +.....+-+.+|||||.+.-++++.++|||+||+++||+++ ...||....+ ++.++-...+.+......
T Consensus 690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-e~vven~~~~~~~~~~~~---- 764 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-EQVVENAGEFFRDQGRQV---- 764 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-HHHHHhhhhhcCCCCcce----
Confidence 333 33445677889999999999999999999999999999876 7889975543 222233333333322111
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
....+.-+...++++|.+||+.|.++||+++++...|++.
T Consensus 765 -----~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 765 -----VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -----eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1223344556788999999999999999999999988764
No 36
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-38 Score=354.05 Aligned_cols=258 Identities=25% Similarity=0.359 Sum_probs=212.9
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCC-C-hhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCc
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREG-N-NNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 882 (1114)
..+.|.+.+.||+|+||+||.|+.. +|+.||+|++.+.... . ....+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 3478999999999999999999865 7899999977664221 1 133556778999999999 9999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-CCeEEeeccCcee
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK-FEAHVGDFGLAKV 961 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfG~a~~ 961 (1114)
.|+||||+.||+|.+++.. ...+.+.....+++|+++|++|+|+. ||+||||||+||+++.+ +++||+|||++..
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999996 67899999999999999999999999 99999999999999999 9999999999997
Q ss_pred cCCCCCCccccccccccccCccccccCC-CC-cccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYTMK-VT-EKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
.. .......+.+|++.|+|||++.+.. |+ .++||||+||++|.|++|+.||.... .....+. +..+
T Consensus 171 ~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~----~~~l~~k-i~~~------ 238 (370)
T KOG0583|consen 171 SP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN----VPNLYRK-IRKG------ 238 (370)
T ss_pred cC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc----HHHHHHH-HhcC------
Confidence 64 3445667889999999999999987 86 78999999999999999999998622 2222222 2221
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
.+..+.... ..++..++.+|+..||.+|+++.+++ .-.-++
T Consensus 239 ---~~~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 239 ---EFKIPSYLL---SPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred ---CccCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 111111111 55788999999999999999999999 433333
No 37
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2e-38 Score=362.26 Aligned_cols=262 Identities=25% Similarity=0.423 Sum_probs=206.8
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCY 878 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 878 (1114)
+..++|++.++||+|+||.||+|.+. +++.||||++..... ....+.+..|+.+++.+ +||||++++++|.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT--ASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc--hHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 45678999999999999999999742 356899999875432 22345688999999999 8999999999987
Q ss_pred ecC-ceEEEEecCCCCCHHHHhccCC------------------------------------------------------
Q 001253 879 HQG-SNLLMYEYMARGSLGELLHGAS------------------------------------------------------ 903 (1114)
Q Consensus 879 ~~~-~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------ 903 (1114)
..+ ..++||||+++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 644 5789999999999999986421
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-Cccccccc
Q 001253 904 -------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAG 975 (1114)
Q Consensus 904 -------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g 975 (1114)
..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++....... .......+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 2477888999999999999999998 999999999999999999999999999986532221 12223456
Q ss_pred cccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHH
Q 001253 976 SYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSH 1054 (1114)
Q Consensus 976 ~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1114)
++.|+|||++.+..++.++|||||||++|||++ |..||.......... .....+.. .. .+...
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~----~~~~~~~~--------~~----~~~~~ 302 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFC----QRLKDGTR--------MR----APENA 302 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHH----HHHhcCCC--------CC----CCCCC
Confidence 788999999999999999999999999999997 999997544322211 11111111 00 11122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001253 1055 MITVLKIAMLCTNISPFDRPTMREVVLMLSESNR 1088 (1114)
Q Consensus 1055 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1088 (1114)
...+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 3468899999999999999999999999998754
No 38
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.6e-38 Score=323.54 Aligned_cols=264 Identities=24% Similarity=0.287 Sum_probs=210.9
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe--cCceEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH--QGSNLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 885 (1114)
++|+..++|++|+||.||+|+++ +++.||+|+++...+...-.. ...+|+.++.+++|||||.+.++... -+..|+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPI-tsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPI-TSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcc-hhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 56888899999999999999976 789999999987765433322 34579999999999999999998764 357899
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|||||+. +|..+++.....+...++..+..|+++|++|||.. .|+|||+|++|+|++..|.+||+|||+|+.++.+
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999998 99999998888999999999999999999999999 9999999999999999999999999999998754
Q ss_pred CCCccccccccccccCccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc-
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR- 1043 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1043 (1114)
....+..+-|..|+|||.+.+.+ |+.+.||||+|||+.||+++++-|++...-+.+...++.. +-..+.++.+-
T Consensus 231 -~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~ll---GtPte~iwpg~~ 306 (419)
T KOG0663|consen 231 -LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLL---GTPSEAIWPGYS 306 (419)
T ss_pred -cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHh---CCCccccCCCcc
Confidence 34556678899999999998754 8999999999999999999999998766544444443321 11111111110
Q ss_pred ---------ccCC------CcccHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1044 ---------LNLQ------DEKTVS-HMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1044 ---------~~~~------~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+... ..+... ....-++++...+..||.+|.||.|.++
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0000 001111 2246788999999999999999999764
No 39
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=329.45 Aligned_cols=270 Identities=27% Similarity=0.353 Sum_probs=212.5
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHH--HhcCCCCceeeEEeEEEecC-
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILT--LGKIRHRNIVKLYGFCYHQG- 881 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~- 881 (1114)
.....+.++.+.||+|.||.||+|+|+ |+.||||+|....+. .+.+|.++ ..-++|+||+.+++.-..+.
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE~------SWfrEtEIYqTvmLRHENILgFIaaD~~~~g 279 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDER------SWFRETEIYQTVMLRHENILGFIAADNKDNG 279 (513)
T ss_pred HhhhheeEEEEEecCccccceeecccc-CCceEEEEecccchh------hhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence 345678999999999999999999999 999999999765542 34444444 44569999999998765433
Q ss_pred ---ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEecCCCCCCeEECCCCCeEE
Q 001253 882 ---SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHD-----CKPRIFHRDIKSNNILLDDKFEAHV 953 (1114)
Q Consensus 882 ---~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlk~~Nill~~~~~~kl 953 (1114)
..+||++|.+.|||+|++. ...++....++++..+|.||++||.. .+|.|+|||||++||||..++.+.|
T Consensus 280 s~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 280 SWTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred ceEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 5689999999999999998 46899999999999999999999985 4889999999999999999999999
Q ss_pred eeccCceecCCCC---CCccccccccccccCccccccCC----C--CcccchHHHHHHHHHHHhC----------CCCCC
Q 001253 954 GDFGLAKVIDMPQ---SKSMSAIAGSYGYIAPEYAYTMK----V--TEKCDIYSYGVVLLELLTG----------RAPVQ 1014 (1114)
Q Consensus 954 ~DfG~a~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~----~--~~~~DvwslGvil~el~tg----------~~p~~ 1014 (1114)
+|+|+|....... .......+||.+|||||++...- + -..+||||||.++||++-+ +.||.
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 9999998764332 12345678999999999986421 1 1368999999999999752 37888
Q ss_pred CCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1015 PLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
+..+.+...+..++.+-...+ .+.+. ......+....+.++|+.||..+|.-|-|+--+.+.|.++...
T Consensus 438 d~Vp~DPs~eeMrkVVCv~~~-----RP~ip-nrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVVCVQKL-----RPNIP-NRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred cCCCCCCCHHHHhcceeeccc-----CCCCC-cccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 777666655555543332111 11111 1234566778899999999999999999999999999988653
No 40
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-38 Score=350.49 Aligned_cols=250 Identities=26% Similarity=0.368 Sum_probs=214.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+-|+.++.||.|+.|.|..|++. +|+.+|||++.+...-.+.....+++|+-+|+.+.||||++++++++...+.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 45788889999999999999964 89999999998876555555677899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||++||.|.+++-. .+.+++.++.+++.||+.|+.|+|+. +|+|||+||+|+|+|..+.+||+|||+|..- ...
T Consensus 92 Eyv~gGELFdylv~-kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe--~~g 165 (786)
T KOG0588|consen 92 EYVPGGELFDYLVR-KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE--VPG 165 (786)
T ss_pred EecCCchhHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc--cCC
Confidence 99999999999974 45788888999999999999999999 9999999999999999999999999999863 355
Q ss_pred CccccccccccccCccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVT-EKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
....+.||.|+|.|||++.+.+|+ .++||||+|||+|.+++|+-||++ +. .+.+-..++.+.+
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD----dN-ir~LLlKV~~G~f----------- 229 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD----DN-IRVLLLKVQRGVF----------- 229 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC----cc-HHHHHHHHHcCcc-----------
Confidence 667788999999999999999986 589999999999999999999972 22 2233333443332
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
+.+-....++.+++.+|+..||++|.|++||++-
T Consensus 230 --~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 --EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred --cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 2233344578899999999999999999999763
No 41
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.7e-39 Score=312.98 Aligned_cols=250 Identities=27% Similarity=0.381 Sum_probs=216.0
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
-++|++.+.||+|.||.||.|+.+ ++-.||+|++.+..........++++|+++...++||||++++++|.++...|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 368999999999999999999966 6789999999988776666788899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 887 YEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
+||.++|++...+... ...+++.....+..|+|.|+.|+|.. +|+||||||+|+|++.++.+|++|||.+...
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~--- 174 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA--- 174 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec---
Confidence 9999999999999743 44688899999999999999999998 9999999999999999999999999999863
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
+.....+.+||..|.|||+..+..++..+|+|++|++.||++.|.+||......+ ..+.++. .+
T Consensus 175 p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e-tYkrI~k-------------~~-- 238 (281)
T KOG0580|consen 175 PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE-TYKRIRK-------------VD-- 238 (281)
T ss_pred CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH-HHHHHHH-------------cc--
Confidence 2556678899999999999999999999999999999999999999998655322 2222222 00
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.++|.+|+..+|.+|.+..|++.
T Consensus 239 --~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 239 --LKFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred --ccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 1122333456889999999999999999999875
No 42
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=345.82 Aligned_cols=262 Identities=24% Similarity=0.398 Sum_probs=222.0
Q ss_pred HHHHHHhcCCcCCceecccCCeEEEEEEeCC-CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec
Q 001253 802 KDLVVATDNFDERFVIGRGACGTVYRAVLRT-GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ 880 (1114)
Q Consensus 802 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 880 (1114)
++|+....++.+.++||-|.||.||.|.|+. .-.||||.++.+... ..+|..|+.+|+.++|||+|+++|+|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----veEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh----HHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 4566667788899999999999999999983 567999999765443 67899999999999999999999999999
Q ss_pred CceEEEEecCCCCCHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 881 GSNLLMYEYMARGSLGELLHGASS-TLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
..+|+|+|||..|+|.++++.... .++.-..+.||.||++||+||... ++||||+.++|+||.++..||++|||++
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchh
Confidence 999999999999999999986543 677778899999999999999998 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccc
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSG 1038 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1114)
+.+..+....+....-+..|.|||.+....++.|+|||+|||++||+.| |-.||++.+- ..+.+.+.++-.
T Consensus 413 RlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-----SqVY~LLEkgyR--- 484 (1157)
T KOG4278|consen 413 RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYGLLEKGYR--- 484 (1157)
T ss_pred hhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-----HHHHHHHhcccc---
Confidence 9886555555555566789999999999999999999999999999998 8899975542 233333333211
Q ss_pred cccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1039 MLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
-+.+..+...++++|+.||+|.|.+||+++|+-+.++.+.
T Consensus 485 ---------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 485 ---------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred ---------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 2234455668999999999999999999999999997763
No 43
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-37 Score=342.14 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=203.8
Q ss_pred ceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe----cCceEEEEecC
Q 001253 815 FVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH----QGSNLLMYEYM 890 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~~ 890 (1114)
..||+|++|.||+|.+. |+.||||++...........+.+.+|+.++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 67999999999999984 89999999987655554445778899999999999999999999877 34678999999
Q ss_pred CCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcc
Q 001253 891 ARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSM 970 (1114)
Q Consensus 891 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 970 (1114)
++|+|.++++.. ..+++.....++.+++.|++|+|+.. +++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---- 177 (283)
T PHA02988 105 TRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---- 177 (283)
T ss_pred CCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc----
Confidence 999999999853 47899999999999999999999732 78899999999999999999999999998654222
Q ss_pred ccccccccccCcccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 971 SAIAGSYGYIAPEYAYT--MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 971 ~~~~g~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ..........+. +.
T Consensus 178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~----~~~~~~i~~~~~--------~~---- 241 (283)
T PHA02988 178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT----KEIYDLIINKNN--------SL---- 241 (283)
T ss_pred ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcCC--------CC----
Confidence 23468899999999876 6799999999999999999999999975432 222222211111 11
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNR 1088 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1088 (1114)
..+......+.+++.+||+.||++|||++|+++.|++...
T Consensus 242 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 242 KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1111234468899999999999999999999999998754
No 44
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.9e-37 Score=343.50 Aligned_cols=252 Identities=25% Similarity=0.323 Sum_probs=203.2
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|+..+.||+|+||+||+|..+ +|+.||+|++.............+.+|+.++++++|++|+++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 677889999999999999975 7899999998765433333345677899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 890 MARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 890 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
+++|+|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++..... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--~~ 156 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPE--GE 156 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC--CC
Confidence 9999999887643 34689999999999999999999998 999999999999999999999999999987532 22
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
......|++.|+|||++.+..++.++||||+||++|||++|+.||............ ...+... . .
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~-~~~~~~~---------~----~ 222 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEV-DRRVKED---------Q----E 222 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHH-HHHhhcc---------c----c
Confidence 233457999999999999999999999999999999999999999865432221111 1111110 0 0
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPT-----MREVVL 1081 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1081 (1114)
..+......+.+++.+||+.||++||+ ++++++
T Consensus 223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 111122346788999999999999997 677664
No 45
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=380.94 Aligned_cols=504 Identities=32% Similarity=0.373 Sum_probs=296.1
Q ss_pred EEecCCcccCCCCcccCCCCCCCEEEccCCCcccccccccccccccceeccccccccCCCCcccccCcccchhhhccccc
Q 001253 107 LDLSFNQLSRNIPKEIGNCSSLEVLNLNNNRLEAHIPKELGNLSSLTILNIYNNRISGPFPKEIGKLSALSQLVAYSNNI 186 (1114)
Q Consensus 107 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~i 186 (1114)
+|+|..++. .||..+-+-..++.|+++.|.+-...-....+.-+|+.|||++|++. .+|..+..+.+|+.|.++.|-|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 566666664 56666655555777777777665432233444445777777777776 6666666666666666666665
Q ss_pred CCCCCCCccccccccceeccccccccccCCCCCCCCccceeeccccccCCCCcccccccccccEEEecCCcccCcccccc
Q 001253 187 SGSLPPTLGNLKRLKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPKEIGMLKYLTDVILWGNQLSGVIPKEL 266 (1114)
Q Consensus 187 ~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l 266 (1114)
. ..|.+..++.+|++|.|.+|++. ..|.++..+++|+.|+++.|.+. .+|..+
T Consensus 81 ~-------------------------~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i 133 (1081)
T KOG0618|consen 81 R-------------------------SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVI 133 (1081)
T ss_pred h-------------------------hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhH
Confidence 5 34445555556666666666665 56666666666666666666665 456667
Q ss_pred ccccccchhhcccccccCCchhhhcCCCccceeeecccccccccCccccccccccccccccccCCCCCchhhhcccccce
Q 001253 267 GNCTSLETLALYDNKQVGQLPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLEL 346 (1114)
Q Consensus 267 ~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~ 346 (1114)
..++.++.+..++|.....+ +... ++.+++..|.+.+.++..+..+.. .|||++|.++ -..+..+.+|+.
T Consensus 134 ~~lt~~~~~~~s~N~~~~~l----g~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~ 203 (1081)
T KOG0618|consen 134 EVLTAEEELAASNNEKIQRL----GQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEV 203 (1081)
T ss_pred HhhhHHHHHhhhcchhhhhh----cccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhh
Confidence 77777777777777322222 2222 777777777777777777776666 6788888776 234666777888
Q ss_pred eecccccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccc
Q 001253 347 LYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHL 426 (1114)
Q Consensus 347 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 426 (1114)
+....|++....- .-++|+.|+.++|.++...+ . ..-.+|+++++++|++++. |++++.+.+|+.|+..+|+|
T Consensus 204 l~c~rn~ls~l~~----~g~~l~~L~a~~n~l~~~~~-~-p~p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l 276 (1081)
T KOG0618|consen 204 LHCERNQLSELEI----SGPSLTALYADHNPLTTLDV-H-PVPLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRL 276 (1081)
T ss_pred hhhhhcccceEEe----cCcchheeeeccCcceeecc-c-cccccceeeecchhhhhcc-hHHHHhcccceEecccchhH
Confidence 8888888764321 23678888888888773222 1 1234566667777766643 36666667777777777777
Q ss_pred cCCCCccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchh-hcccc-ccEeecccccCCCCccc
Q 001253 427 TGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDL-CKLAN-LSTVELDQNQFSGPIPT 504 (1114)
Q Consensus 427 ~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~-L~~L~L~~N~l~~~~p~ 504 (1114)
+ .+|..+...++|++|.+.+|.+. .+|.....+++|++|+|..|+|. .+|+.+ ..+.. |+.|+.+.|+++.....
T Consensus 277 ~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~ 353 (1081)
T KOG0618|consen 277 V-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSY 353 (1081)
T ss_pred H-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccc
Confidence 4 56666666667777777777766 55666666667777777777666 444432 22222 55555566665522211
Q ss_pred cccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccc-cccccccceEEECccccccCCCchhhhhccc
Q 001253 505 EIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPL-EIFSCKMLQRLDLSWNKFVGALPREIGSLFQ 583 (1114)
Q Consensus 505 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 583 (1114)
.=...+.|+.|+|.+|+++...-..+.+.++|+.|+|++|+|. .+|+ .+.++..|+.|+||+|+++ .+|..+..+..
T Consensus 354 ~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~ 431 (1081)
T KOG0618|consen 354 EENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGR 431 (1081)
T ss_pred cchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhh
Confidence 1113344555555555555444444555555555555555554 3332 2334555555555555554 44455555555
Q ss_pred CCeeeccCccCCCcccccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccC-CccccchhhhHhhhc
Q 001253 584 LELLKLSENELSGSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLI-PPELGNLILLEYLLL 662 (1114)
Q Consensus 584 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L 662 (1114)
|++|...+|+|. ..| .+..++.|+.+|+|.|+|+ ... |.... -++|++|||
T Consensus 432 L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~-------------------------~~~l~~~~p-~p~LkyLdl 483 (1081)
T KOG0618|consen 432 LHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLS-------------------------EVTLPEALP-SPNLKYLDL 483 (1081)
T ss_pred hHHHhhcCCcee-ech-hhhhcCcceEEecccchhh-------------------------hhhhhhhCC-Ccccceeec
Confidence 555555555554 344 4444555555555555444 322 22222 156777777
Q ss_pred cCcccccCCCCccccccccceEEeccC
Q 001253 663 NNNHLSGEIPGSFVNLSSLLGCNFSYN 689 (1114)
Q Consensus 663 s~N~l~g~ip~~~~~l~~l~~l~ls~N 689 (1114)
++|.-.-.--..|..+.++..+++.-|
T Consensus 484 SGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 484 SGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred cCCcccccchhhhHHhhhhhheecccC
Confidence 777643344455666666767776666
No 46
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=329.62 Aligned_cols=273 Identities=26% Similarity=0.372 Sum_probs=201.6
Q ss_pred cCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHh--cCCCCceeeEEeEEEecC----c
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLG--KIRHRNIVKLYGFCYHQG----S 882 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~~~----~ 882 (1114)
...+..+.||+|.||.||||.++ ++.||||++.... .+.|..|-++.+ .++|+||++++++-+..+ +
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 34455568999999999999998 5999999996543 455666666655 558999999999877655 7
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEecCCCCCCeEECCCCCeEEeec
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDC------KPRIFHRDIKSNNILLDDKFEAHVGDF 956 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlk~~Nill~~~~~~kl~Df 956 (1114)
+++|+||.+.|+|.++++ ...++|....+|+..+++||+|||+.. +|+|+|||||.+||||..|+++.|+||
T Consensus 283 ywLVt~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred eeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 899999999999999998 567999999999999999999999864 679999999999999999999999999
Q ss_pred cCceecCCCCC-CccccccccccccCccccccCC-CC-----cccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 001253 957 GLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMK-VT-----EKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNF 1029 (1114)
Q Consensus 957 G~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~-~~-----~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 1029 (1114)
|+|..+..... ......+||.+|||||++.+.- +. .+.||||+|.++|||+++...+.+ ....++.--....
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~-~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP-GPVPEYQLPFEAE 439 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC-CCCCcccCchhHH
Confidence 99998763322 2233478999999999987543 22 368999999999999997654432 1111110001111
Q ss_pred HhcCCccccccc----cccc--CC-CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCC
Q 001253 1030 IRNNSLVSGMLD----ARLN--LQ-DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQG 1091 (1114)
Q Consensus 1030 ~~~~~~~~~~~~----~~~~--~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 1091 (1114)
+...+-.+.+.+ .+.+ .+ ....-..+..+.+.+..||+.||+.|.|+.=|-+.+.+++....
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 111111111110 0000 00 01111345578889999999999999999999999988866544
No 47
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-38 Score=329.01 Aligned_cols=250 Identities=23% Similarity=0.378 Sum_probs=216.0
Q ss_pred cCCcCCceecccCCeEEEEEEe-CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVL-RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.+|++.+.||+|.||.|-+|.. ..|+.||||.+++....++...-.+++|+++|..++||||++++++|+..+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 6788889999999999999996 589999999999988877777778899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||..+|.|+|++.. .+.+++.+...+++||.+|+.|+|.+ +++|||+|.+|||+|+++++||+|||++-.+. ..
T Consensus 133 EYaS~GeLYDYiSe-r~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~--~~ 206 (668)
T KOG0611|consen 133 EYASGGELYDYISE-RGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA--DK 206 (668)
T ss_pred EecCCccHHHHHHH-hccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc--cc
Confidence 99999999999984 45899999999999999999999999 99999999999999999999999999998865 45
Q ss_pred CccccccccccccCccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVT-EKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
...++++|+|-|.+||++.+.+|. +.+|-||+||++|.++.|..||++.+. ...+++ +..+.+.+
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh----k~lvrQ-Is~GaYrE--------- 272 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH----KRLVRQ-ISRGAYRE--------- 272 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH----HHHHHH-hhcccccC---------
Confidence 567889999999999999999986 689999999999999999999975442 222322 23332211
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
+ +......-+|++|+..+|++|.|..+|..-.
T Consensus 273 -P----~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 273 -P----ETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -C----CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 1 1112456789999999999999999987654
No 48
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.8e-37 Score=354.34 Aligned_cols=261 Identities=25% Similarity=0.401 Sum_probs=207.1
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEe------CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEE
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVL------RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFC 877 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 877 (1114)
....++|++.++||+|+||+||+|++ .++..||||+++..... ...+.+.+|+.+++.+ +||||++++++|
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc--HHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 34456899999999999999999974 24568999998754332 2345688899999999 899999999999
Q ss_pred EecCceEEEEecCCCCCHHHHhccCC------------------------------------------------------
Q 001253 878 YHQGSNLLMYEYMARGSLGELLHGAS------------------------------------------------------ 903 (1114)
Q Consensus 878 ~~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------ 903 (1114)
.+.+..++||||+++|+|.++++...
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999999999999986321
Q ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 904 --------------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 904 --------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 1478889999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCCc-cccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 964 MPQSKS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 964 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
...... .....++..|+|||++.+..++.++|||||||++|||++ |..||..........+++.. +..
T Consensus 266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~----~~~------ 335 (375)
T cd05104 266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE----GYR------ 335 (375)
T ss_pred CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh----Ccc------
Confidence 322211 122345678999999999999999999999999999998 88888755433333332221 100
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
...+.....++.+++.+||+.||++||+++|+++.|++.
T Consensus 336 ------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 ------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 000111124688999999999999999999999999863
No 49
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.7e-37 Score=338.33 Aligned_cols=257 Identities=20% Similarity=0.333 Sum_probs=207.3
Q ss_pred hcCCcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCce
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 883 (1114)
.++|++.+.||+|+||.||+|.++ .+..||+|+++.... ......+.+|+..++.++||||+++++++..++..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 357889999999999999999864 356899999876533 23345788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++|+|.+++......+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 999999999999999986666889999999999999999999998 99999999999999999999999999876532
Q ss_pred CCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
...........++..|+|||.+.+..++.++|||||||++||+++ |+.||..... ...++. +.....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~----~~~~~~-~~~~~~------- 226 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG----QDVIKA-VEDGFR------- 226 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH----HHHHHH-HHCCCC-------
Confidence 222112222345678999999999999999999999999999775 9999975432 112221 111100
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.+.+......+.+++.+||+.+|++||+++|+.+.|+++
T Consensus 227 -----~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 -----LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 011122334688899999999999999999999998764
No 50
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=338.30 Aligned_cols=261 Identities=24% Similarity=0.380 Sum_probs=221.6
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC---CCc--EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR---TGH--TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH 879 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~---~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 879 (1114)
++.++.....+.||+|-||.||+|.+. .|+ .||||..+.+...+. .+.|..|+.+++.++|||||+++|+|.+
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~--tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD--TEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh--HHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 445566777789999999999999964 233 488898887655433 6779999999999999999999999975
Q ss_pred cCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 880 QGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
...++|||.++-|.|..+++.+...++......++.||..||+|||+. .+|||||.++|||+.....||++|||++
T Consensus 463 -~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 463 -QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred -cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchh
Confidence 568999999999999999998888999999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccc
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSG 1038 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1114)
+.+.+......+...-+..|||||.+.-.+++.++|||.|||.+||+++ |..||......+- ..
T Consensus 539 R~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--------------I~- 603 (974)
T KOG4257|consen 539 RYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--------------IG- 603 (974)
T ss_pred hhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--------------EE-
Confidence 9988777766666667889999999999999999999999999999887 9999986554221 11
Q ss_pred cccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001253 1039 MLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNR 1088 (1114)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1088 (1114)
.-.-..+.+.++.++..++.++.+||..||.+||++.|+...|.++..
T Consensus 604 --~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 --HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred --EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 111122234455667789999999999999999999999999988744
No 51
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.5e-37 Score=334.88 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=205.7
Q ss_pred cCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
++|++.+.||+|+||.||+|+++++..+|+|.+...... .+.+..|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 468888999999999999999988889999998644322 4568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++|+|.++++.....+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++|||.++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 9999999999986556789999999999999999999998 9999999999999999999999999999865332222
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+.+.........
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~----~~~~~~i~~~~~~------------ 220 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN----YEVVEMISRGFRL------------ 220 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHHCCCCC------------
Confidence 2223345678999999998889999999999999999999 8999864432 2222222111100
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
..+......+.+++.+||+++|++||+++|+++.|.
T Consensus 221 -~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 221 -YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 001112346889999999999999999999998863
No 52
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=324.60 Aligned_cols=264 Identities=27% Similarity=0.338 Sum_probs=203.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----c
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG-----S 882 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 882 (1114)
-.|...+++|.|+||.||+|... +++.||||++..+.... .+|+++|+.++|||||++.-+|.... .
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 35777889999999999999976 67999999997666533 36899999999999999999986532 2
Q ss_pred eEEEEecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-CCeEEeeccC
Q 001253 883 NLLMYEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK-FEAHVGDFGL 958 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfG~ 958 (1114)
..+|||||+. +|.+.++. ....++.-.+.-+..|+.+||+|||+. +|+||||||.|+|+|.+ |.+||||||.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence 3589999988 99999874 356788888899999999999999998 99999999999999976 8999999999
Q ss_pred ceecCCCCCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH-------H
Q 001253 959 AKVIDMPQSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNF-------I 1030 (1114)
Q Consensus 959 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~-------~ 1030 (1114)
|+..... ........+..|+|||.+.+. .|+.+.||||.||++.||+-|++-|++....+.++.+++-+ +
T Consensus 173 AK~L~~~--epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 173 AKVLVKG--EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred ceeeccC--CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9987533 233455678899999998864 59999999999999999999999998766555555554421 1
Q ss_pred hc--CCcccccccccccCCCc---ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 001253 1031 RN--NSLVSGMLDARLNLQDE---KTVSHMITVLKIAMLCTNISPFDRPTMREVVL--MLSES 1086 (1114)
Q Consensus 1031 ~~--~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1086 (1114)
.. ..+.+.. .+.+..... .......+..+++.+++..+|.+|.++.|++. .+.++
T Consensus 251 ~~mn~~y~~~~-~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel 312 (364)
T KOG0658|consen 251 KSMNPNYTEFK-FPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL 312 (364)
T ss_pred hhcCccccccc-CcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence 11 1111111 111111110 22334457899999999999999999999874 34444
No 53
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.3e-36 Score=339.96 Aligned_cols=263 Identities=22% Similarity=0.384 Sum_probs=204.4
Q ss_pred hcCCcCCceecccCCeEEEEEEeCC-----------------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCce
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRT-----------------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNI 870 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 870 (1114)
.++|++.++||+|+||.||+|++++ +..||+|++..... .....++.+|+.++++++||||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN--KNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCe
Confidence 4678899999999999999998642 33699999875432 3345678899999999999999
Q ss_pred eeEEeEEEecCceEEEEecCCCCCHHHHhccCC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 001253 871 VKLYGFCYHQGSNLLMYEYMARGSLGELLHGAS------------------STLDWQTRFMIALGAAEGLSYLHHDCKPR 932 (1114)
Q Consensus 871 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 932 (1114)
+++++++.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ 158 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---N 158 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---C
Confidence 999999999999999999999999999985321 2468889999999999999999998 9
Q ss_pred eEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh--C
Q 001253 933 IFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT--G 1009 (1114)
Q Consensus 933 ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t--g 1009 (1114)
|+||||||+||++++++.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ +
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 99999999999999999999999999986532222 11223456789999999988889999999999999999987 5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1010 RAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1010 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
..||..... ......+....+....... ...+......+.+++.+||+.||++|||+.||.+.|++
T Consensus 239 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 239 EQPYGELTD-EQVIENAGEFFRDQGRQVY---------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCcCCH-HHHHHHHHHHhhhcccccc---------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 567764432 2222222222221110000 00111223468899999999999999999999998864
No 54
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-39 Score=314.22 Aligned_cols=252 Identities=25% Similarity=0.360 Sum_probs=204.9
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|++.++||+|.|+.||++... +|+.+|+|++....... ...+++.+|+.+.+.++|||||++.+.+...+..|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 367888889999999999999865 79999999887554332 2467899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC---CCeEEeeccCceecC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK---FEAHVGDFGLAKVID 963 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfG~a~~~~ 963 (1114)
+|+|+|++|..-+-. +...++..+-..++||++|+.|+|.+ +|||||+||+|+++-.. .-+|++|||+|..++
T Consensus 89 Fe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999999665432 24678888889999999999999999 99999999999999543 459999999999876
Q ss_pred CCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
.......++|||+|||||++...+|+..+|||+.||++|-++.|..||.+.+.. ++.+.+ ..+.+
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rlye~I----~~g~y-------- 229 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYEQI----KAGAY-------- 229 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HHHHHH----hcccc--------
Confidence 445556789999999999999999999999999999999999999999854332 222222 22211
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVV 1080 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1080 (1114)
....+.-.....+..+++++|+..||.+|.|+.|.+
T Consensus 230 -d~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 230 -DYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred -CCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 111222223344677899999999999999998765
No 55
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=324.19 Aligned_cols=279 Identities=24% Similarity=0.328 Sum_probs=210.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe-----cC
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH-----QG 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~ 881 (1114)
...|...+.||+|+||.|+.|..+ +|+.||||++.......- ..++..+|++.+++++|+||+.+.+++.. -.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~-~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQI-DAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchH-HHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 355666789999999999999976 899999999975544332 34556679999999999999999999865 24
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..|+|+|+|+- +|...++ .+..++......+..|+++|+.|+|+. +|+|||+||.|++++.+..+||+|||+|+.
T Consensus 100 DvYiV~elMet-DL~~iik-~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIK-SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eeEEehhHHhh-HHHHHHH-cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceee
Confidence 67999999955 9999998 344599999999999999999999999 999999999999999999999999999998
Q ss_pred cCCC-CCCccccccccccccCccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH----------HH
Q 001253 962 IDMP-QSKSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR----------NF 1029 (1114)
Q Consensus 962 ~~~~-~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~----------~~ 1029 (1114)
.... ....++..+.|..|+|||++. ...|+.+.||||.|||+.||++|++-|++.+....+..... ..
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~ 254 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQK 254 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHH
Confidence 7532 234456788999999999875 56799999999999999999999999986654332211111 00
Q ss_pred Hhc---CCccccccc-ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhccCCCc
Q 001253 1030 IRN---NSLVSGMLD-ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL--MLSESNRRQGHF 1093 (1114)
Q Consensus 1030 ~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~~~~~~ 1093 (1114)
+.. ..+....-. ++..+ ....+.......+++.+|+..||.+|+|++|.++ .++.......-.
T Consensus 255 i~s~~ar~yi~slp~~p~~~f-~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 255 IRSEKARPYIKSLPQIPKQPF-SSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred hccHHHHHHHHhCCCCCCCCH-HHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 110 001111100 00000 0011233457889999999999999999999875 455555444443
No 56
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1e-36 Score=351.31 Aligned_cols=262 Identities=26% Similarity=0.430 Sum_probs=207.8
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEE
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFC 877 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 877 (1114)
....++|++.++||+|+||.||+|++. ++..||+|+++..... .....+.+|+.+++.+ +||||++++++|
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 345578999999999999999999853 3457999999755432 2345688899999999 899999999999
Q ss_pred EecCceEEEEecCCCCCHHHHhccCC------------------------------------------------------
Q 001253 878 YHQGSNLLMYEYMARGSLGELLHGAS------------------------------------------------------ 903 (1114)
Q Consensus 878 ~~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------ 903 (1114)
...+..++||||+++|+|.++++...
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999999999999885321
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 904 ---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 904 ---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
..+++.++.+++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 2468888999999999999999998 9999999999999999999999999999865432221
Q ss_pred -ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 969 -SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 969 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
......+++.|||||++.+..++.++|||||||++|||++ |+.||............+. .. . ..
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~----~~-~-----~~---- 334 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVK----RG-Y-----QM---- 334 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHH----cc-c-----Cc----
Confidence 1122345678999999998899999999999999999997 9999976543322222211 11 0 00
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
..+.....++.+++.+||+.||.+|||+.++++.|+++.
T Consensus 335 --~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 --SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred --cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 001111346889999999999999999999999999864
No 57
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-37 Score=326.56 Aligned_cols=258 Identities=24% Similarity=0.272 Sum_probs=201.0
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCCh-----------hhHHHHHHHHHHHhcCCCCceeeEEe
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNN-----------NVDNSFRAEILTLGKIRHRNIVKLYG 875 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~l~~ 875 (1114)
-++|++.+.||+|.||.|-+|+.. +++.||||++.+...... ...+..++|+.++++++|||||++++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 378999999999999999999965 789999999976532111 11247889999999999999999999
Q ss_pred EEEec--CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEE
Q 001253 876 FCYHQ--GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHV 953 (1114)
Q Consensus 876 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 953 (1114)
+..+. +..|||+|||..|.+.+.=.. ...++..++++++++++.||+|||.+ ||+||||||+|+|++++|+|||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p~d-~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCPPD-KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCCCC-cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEe
Confidence 98764 578999999999887654431 22389999999999999999999999 9999999999999999999999
Q ss_pred eeccCceecCCC----CCCccccccccccccCccccccCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHH
Q 001253 954 GDFGLAKVIDMP----QSKSMSAIAGSYGYIAPEYAYTMK----VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTW 1025 (1114)
Q Consensus 954 ~DfG~a~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~ 1025 (1114)
+|||.+...... ........+|||.|+|||...+.. .+.+.||||+||++|.++.|+.||.+... ..
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~-----~~ 326 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE-----LE 326 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH-----HH
Confidence 999999865211 111223468999999999987633 34688999999999999999999964321 11
Q ss_pred HHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1026 VRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
..+.+. ...+.. +...+....+.++|.++|.+||++|.+..+|..-..-
T Consensus 327 l~~KIv---------n~pL~f--P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 327 LFDKIV---------NDPLEF--PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred HHHHHh---------cCcccC--CCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 111121 222221 1222445678899999999999999999998655443
No 58
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.6e-37 Score=343.74 Aligned_cols=247 Identities=23% Similarity=0.287 Sum_probs=202.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|+.+ +|+.||+|++...........+.+.+|+.++++++||||+++++++.++...|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888999999999999999976 78999999997544333334566888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~--- 153 (291)
T cd05612 81 EYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD--- 153 (291)
T ss_pred eCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC---
Confidence 99999999999974 34688999999999999999999998 999999999999999999999999999986532
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ....+..... . ..
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~----~~~~~~i~~~-~---------~~-- 216 (291)
T cd05612 154 -RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP----FGIYEKILAG-K---------LE-- 216 (291)
T ss_pred -CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhC-C---------cC--
Confidence 12345799999999999999999999999999999999999999975332 2222221111 1 11
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPT-----MREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1081 (1114)
.+......+.+++.+||+.||.+||+ ++|+++
T Consensus 217 --~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 217 --FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred --CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 11112346789999999999999995 777663
No 59
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.7e-37 Score=347.30 Aligned_cols=244 Identities=21% Similarity=0.238 Sum_probs=199.5
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARG 893 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 893 (1114)
+.||+|+||+||+|+.+ +|+.||+|+++............+.+|+.++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999975 78999999998654333333456778999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccc
Q 001253 894 SLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAI 973 (1114)
Q Consensus 894 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 973 (1114)
+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.... ........
T Consensus 81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~-~~~~~~~~ 155 (323)
T cd05571 81 ELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKTF 155 (323)
T ss_pred cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCccccc-CCCcccce
Confidence 99999874 35789999999999999999999998 999999999999999999999999999875321 22233456
Q ss_pred cccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHH
Q 001253 974 AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVS 1053 (1114)
Q Consensus 974 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1114)
+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ........... . . ..+..
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~----~~~~~~~~~~~-~---------~----~~p~~ 217 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----HEKLFELILME-E---------I----RFPRT 217 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC----HHHHHHHHHcC-C---------C----CCCCC
Confidence 79999999999999999999999999999999999999996432 12222211111 1 0 11112
Q ss_pred HHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1054 HMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1054 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
....+.+++.+||+.||++|| ++.++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 234678999999999999999 7888864
No 60
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-40 Score=374.14 Aligned_cols=439 Identities=27% Similarity=0.354 Sum_probs=309.5
Q ss_pred cceeeccccccCCCCcccccccccccEEEecCCcccCccccccccccccchhhcccccccCCchhhhcCCCccceeeecc
Q 001253 224 LQYLGLAQNQLSGEIPKEIGMLKYLTDVILWGNQLSGVIPKELGNCTSLETLALYDNKQVGQLPKELGSIGSLKYLYIYR 303 (1114)
Q Consensus 224 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~L~~ 303 (1114)
|+.||+++|+++ ..|..+..+.+|+.|.++.|.|. ..|.+.+++.+|++|.|..|. ....|.++..+++|++|+++.
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~-l~~lP~~~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNR-LQSLPASISELKNLQYLDLSF 123 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccch-hhcCchhHHhhhcccccccch
Confidence 444444444443 34444444444444444444444 334444444455555554442 334455555555555555555
Q ss_pred cccccccCccccccccccccccccccCCCCCchhhhcccccceeecccccccCcccccccccccCCEEEccccccccccc
Q 001253 304 NELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIP 383 (1114)
Q Consensus 304 n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 383 (1114)
|++. .+|..+..+..++.++.++|...... +.. .++.++|..|.+.+.++.++..+.. .|||++|.+. -
T Consensus 124 N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~l----g~~-~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~ 192 (1081)
T KOG0618|consen 124 NHFG-PIPLVIEVLTAEEELAASNNEKIQRL----GQT-SIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---V 192 (1081)
T ss_pred hccC-CCchhHHhhhHHHHHhhhcchhhhhh----ccc-cchhhhhhhhhcccchhcchhhhhe--eeecccchhh---h
Confidence 5554 55666666666666666666222111 111 1666667777776666666665555 6777777765 2
Q ss_pred CccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccccCCCCccccccCccceeeeccCCccCCcCcccccCCc
Q 001253 384 LGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKS 463 (1114)
Q Consensus 384 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 463 (1114)
.....+.+|+.|....|++.... -.-++|+.|+.++|.++...+. ....+|+++++++|+++ .+|++++.+.+
T Consensus 193 ~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~n 265 (1081)
T KOG0618|consen 193 LDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACAN 265 (1081)
T ss_pred hhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhccc
Confidence 23455666777777777665321 1346777888888888733221 22357888888888888 46688888999
Q ss_pred ceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEEecCceeccCCCcc-ccCCCC-cceeec
Q 001253 464 LVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPRE-VGNLSN-LVTFNV 541 (1114)
Q Consensus 464 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~-L~~L~L 541 (1114)
|+.|...+|+++ .+|..+....+|+.|.+.+|.++ .+|.....++.|++|||..|+|. ..|+. |.-+.. |..|+.
T Consensus 266 le~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~ 342 (1081)
T KOG0618|consen 266 LEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNV 342 (1081)
T ss_pred ceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhh
Confidence 999999999986 78888888899999999999998 67778888999999999999998 45543 333333 788888
Q ss_pred cccccccccccc-ccccccceEEECccccccCCCchhhhhcccCCeeeccCccCCCcccccccccccccccccCCCcCCC
Q 001253 542 SSNFLTGRIPLE-IFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELSGSIPVQIGNLSRLTELQMGGNSFSG 620 (1114)
Q Consensus 542 s~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 620 (1114)
+.|++. ..|.. -...+.|+.|++.+|.++...-+.+.+...|+.|+|++|+|.......+.++..|++|+||||+|+
T Consensus 343 s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~- 420 (1081)
T KOG0618|consen 343 SSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT- 420 (1081)
T ss_pred hhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-
Confidence 888887 45522 224778999999999999887778888999999999999999555566889999999999999999
Q ss_pred CCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcccccCCCCccccccccceEEeccCcc
Q 001253 621 GIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLSGEIPGSFVNLSSLLGCNFSYNNL 691 (1114)
Q Consensus 621 ~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~ls~N~l 691 (1114)
.+|.++.++..|+ +|..-+|+|... | .+.++++|+.+|+|.|+|+-..-..-...+.|++|||++|..
T Consensus 421 ~Lp~tva~~~~L~-tL~ahsN~l~~f-P-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 421 TLPDTVANLGRLH-TLRAHSNQLLSF-P-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhHHHHhhhhhH-HHhhcCCceeec-h-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 8899999999999 799999999954 7 899999999999999999976655555668999999999984
No 61
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-36 Score=339.44 Aligned_cols=267 Identities=22% Similarity=0.283 Sum_probs=205.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||+||+|+++ +++.||+|++...... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 36889999999999999999986 6889999999765432 233456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||++++.+..+.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 80 EYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred ecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 9999977765544 445789999999999999999999998 999999999999999999999999999987643333
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH-----------HHHHhcCCcc
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWV-----------RNFIRNNSLV 1036 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~ 1036 (1114)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||......+...... +.......+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 33345678999999999998889999999999999999999999997543222111110 0000110000
Q ss_pred cccccccccCCC----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGMLDARLNLQD----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
... .+...... .........+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~-~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 236 GLR-FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccc-cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 00000000 000112346899999999999999999999874
No 62
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.7e-37 Score=348.00 Aligned_cols=246 Identities=22% Similarity=0.271 Sum_probs=202.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||+||+|+++ +++.||+|++...........+.+.+|+.++++++||||+++++++.+++..|+||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57899999999999999999986 68999999997654333334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-- 171 (329)
T ss_pred cCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC--
Confidence 99999999999974 34688899999999999999999998 9999999999999999999999999999875322
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+..+. +..+ .....
T Consensus 172 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~~~~~~-i~~~---------~~~~p 235 (329)
T PTZ00263 172 --TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----FRIYEK-ILAG---------RLKFP 235 (329)
T ss_pred --cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----HHHHHH-HhcC---------CcCCC
Confidence 2345799999999999999999999999999999999999999964321 222222 1111 11111
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPT-----MREVV 1080 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl 1080 (1114)
. .....+.+++.+||+.||.+||+ +++++
T Consensus 236 ~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 236 N----WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred C----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 1 12235778999999999999997 56665
No 63
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.6e-37 Score=339.60 Aligned_cols=252 Identities=24% Similarity=0.343 Sum_probs=215.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc-eEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS-NLLM 886 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv 886 (1114)
++|..++++|+|+||.++.++.+ +++.||+|.+.-....... .+....|+.++++++|||||.+.+.+.+++. .++|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 57888999999999999999977 6789999999866654433 4467789999999999999999999999888 8999
Q ss_pred EecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 887 YEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|+|++||++.+.+.+.. ..++++.+..++.|++.|+.|||+. .|+|||||+.||+++.++.|||+|||+|+....+
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 99999999999997655 6899999999999999999999988 9999999999999999999999999999987643
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
. ....+.+||+.||.||.+.+.+|..|+||||+||++|||++-+++|.+.+. ..-+.+..+..
T Consensus 160 ~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m----~~Li~ki~~~~------------ 222 (426)
T KOG0589|consen 160 D-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM----SELILKINRGL------------ 222 (426)
T ss_pred h-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch----HHHHHHHhhcc------------
Confidence 3 355678999999999999999999999999999999999999999975443 22222222211
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..+.+.....++..+|..|++.+|+.||++.+++..
T Consensus 223 -~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 022333445678899999999999999999999876
No 64
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.2e-36 Score=337.06 Aligned_cols=264 Identities=21% Similarity=0.318 Sum_probs=202.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|+.+ +++.||+|+++...... ....+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC--cchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 56899999999999999999976 78999999987543222 2345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++ +|.+++......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 83 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~- 157 (288)
T cd07871 83 EYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT- 157 (288)
T ss_pred eCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-
Confidence 99986 99999876666789999999999999999999998 99999999999999999999999999998653222
Q ss_pred CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc------------CC
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN------------NS 1034 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~------------~~ 1034 (1114)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+...... ..... ..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIF-RLLGTPTEETWPGITSNEE 236 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhCCCChHHhhccccchh
Confidence 22334568999999998865 568999999999999999999999997543222111111 11110 00
Q ss_pred cccccccccccCCC--cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1035 LVSGMLDARLNLQD--EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1035 ~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+.... .+...... ........+..+++.+|+++||.+|||++|+++
T Consensus 237 ~~~~~-~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYL-FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccc-cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 00000000 000112346789999999999999999999874
No 65
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=320.78 Aligned_cols=254 Identities=22% Similarity=0.272 Sum_probs=212.9
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
-++|+..+.||+|.-|+||+|+.+ ++..+|+|++.+..........+.+.|-++++.++||.++.+|+.++.+...|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 467888889999999999999987 4689999999887766555667788899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC-
Q 001253 887 YEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM- 964 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~- 964 (1114)
||||+||+|..+.+++ ...+++..+.-++..|+-||+|||.. |||+|||||+||||.++|++.|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999854 45789999999999999999999999 999999999999999999999999998753311
Q ss_pred ------------------------------------------------------CCCCccccccccccccCccccccCCC
Q 001253 965 ------------------------------------------------------PQSKSMSAIAGSYGYIAPEYAYTMKV 990 (1114)
Q Consensus 965 ------------------------------------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~ 990 (1114)
+.......++||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00011234689999999999999999
Q ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCC
Q 001253 991 TEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISP 1070 (1114)
Q Consensus 991 ~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 1070 (1114)
+.++|.|+|||++|||+.|..||.+......+...+.+ .+.. +.....+..+.++|++.|.+||
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~--------------~l~F--p~~~~vs~~akDLIr~LLvKdP 376 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ--------------PLKF--PEEPEVSSAAKDLIRKLLVKDP 376 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC--------------CCcC--CCCCcchhHHHHHHHHHhccCh
Confidence 99999999999999999999999887766655554432 1111 1122455678999999999999
Q ss_pred CCCCC----HHHHH
Q 001253 1071 FDRPT----MREVV 1080 (1114)
Q Consensus 1071 ~~RPs----~~evl 1080 (1114)
++|.. |.||.
T Consensus 377 ~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 377 SKRLGSKRGAAEIK 390 (459)
T ss_pred hhhhccccchHHhh
Confidence 99998 66554
No 66
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.8e-36 Score=332.93 Aligned_cols=256 Identities=23% Similarity=0.389 Sum_probs=208.3
Q ss_pred HhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
..++|++.++||+|+||+||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence 3478999999999999999999988888999999865332 246788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 887 YEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|||+++++|.++++.. ...+++..+..++.|+++|++|||+. +++||||||+||++++++.++|+|||.+......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999999743 45688999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
.........++..|+|||++.+..++.++|||||||++|+|++ |+.||...... ..... +.... . .
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~~-~~~~~------~--~ 223 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS----DVMSA-LQRGY------R--M 223 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH----HHHHH-HHcCC------C--C
Confidence 2222233446778999999988889999999999999999998 99998643321 11111 11110 0 0
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
+........+.+++.+|++.+|++||+++++.+.|+++
T Consensus 224 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 ----PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 01111234678899999999999999999999999863
No 67
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.8e-36 Score=317.17 Aligned_cols=271 Identities=23% Similarity=0.326 Sum_probs=208.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCc-eeeEEeEEEecC-----
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRN-IVKLYGFCYHQG----- 881 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 881 (1114)
..|+..++||+|+||+||+|+.+ +|+.||+|++.-.... +.......+|+.+++.++|+| ||.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 45677778999999999999966 7899999999876553 223344568999999999999 999999998877
Q ss_pred -ceEEEEecCCCCCHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeecc
Q 001253 882 -SNLLMYEYMARGSLGELLHGAS---STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFG 957 (1114)
Q Consensus 882 -~~~lv~E~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 957 (1114)
..++||||++. +|..++.... ..++...+..++.|+++||+|||++ +|+||||||.||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 78999999987 9999998655 4678889999999999999999999 99999999999999999999999999
Q ss_pred CceecCCCCCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc---C
Q 001253 958 LAKVIDMPQSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN---N 1033 (1114)
Q Consensus 958 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~ 1033 (1114)
+|+.+..+. ......++|..|+|||++.+. .|+...||||+|||++||++++.-|++..+.+.+....+- +.. .
T Consensus 166 lAra~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~-lGtP~e~ 243 (323)
T KOG0594|consen 166 LARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRL-LGTPNEK 243 (323)
T ss_pred hHHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH-cCCCCcc
Confidence 999765433 334566899999999999876 6999999999999999999999888765543222222221 111 1
Q ss_pred Ccc--cccccccccCCCcc-c-------HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 001253 1034 SLV--SGMLDARLNLQDEK-T-------VSHMITVLKIAMLCTNISPFDRPTMREVVLM--LSES 1086 (1114)
Q Consensus 1034 ~~~--~~~~~~~~~~~~~~-~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 1086 (1114)
.+. ..+.+-........ + ........+++.+|++.+|.+|.|++.+++. +.+.
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 111 11111110111111 0 1111368889999999999999999998875 5544
No 68
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.6e-36 Score=345.46 Aligned_cols=256 Identities=22% Similarity=0.234 Sum_probs=206.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||.||+|+++ +++.||+|++...........+.+..|+.+++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999986 68999999998654333334566888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 99999999999974 34688999999999999999999998 999999999999999999999999999986532
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
......|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+............. .+..
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~~~~---~~~~--- 222 (333)
T cd05600 154 -YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP----NETWENLKYWKETLQ---RPVY--- 222 (333)
T ss_pred -ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH----HHHHHHHHhcccccc---CCCC---
Confidence 23455799999999999999999999999999999999999999975432 111111111100000 0000
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..........+.+++.+|++.+|.+||+++|+++.
T Consensus 223 ~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 223 DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00011234568899999999999999999999864
No 69
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.7e-36 Score=336.45 Aligned_cols=267 Identities=22% Similarity=0.333 Sum_probs=202.2
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|++.++||+|+||+||+|+.+ +++.||+|++....... ....+.+|+.+++.++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG--TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc--cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 478999999999999999999986 78999999987544322 234567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||++ +++.+++......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~- 156 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP- 156 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC-
Confidence 99996 588888876666789999999999999999999998 9999999999999999999999999999764322
Q ss_pred CCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc---c-----c
Q 001253 967 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL---V-----S 1037 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~-----~ 1037 (1114)
........|++.|+|||++.+ ..++.++||||+||++|||++|+.||............+......... . .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 222344568999999998865 457889999999999999999999997543322111111111110000 0 0
Q ss_pred ccccccccCCCcccH-------HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1038 GMLDARLNLQDEKTV-------SHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1038 ~~~~~~~~~~~~~~~-------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
............... .....+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000000000 01235778999999999999999999874
No 70
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.2e-36 Score=329.96 Aligned_cols=257 Identities=26% Similarity=0.418 Sum_probs=208.6
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
+..++|++.+.||+|++|.||+|.+.+++.||+|.++..... .+.+.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD----PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYI 78 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc----HHHHHHHHHHHHHCCCCCccceeEEEecCCCeee
Confidence 345679999999999999999999887889999998754322 4568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
||||+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++||||||+||++++++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 999999999999997543 4689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
...........+..|+|||+..+..++.++||||||+++|||++ |+.||..... ..... .+.....
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~-~~~~~~~-------- 222 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN----AEVLQ-QVDQGYR-------- 222 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH----HHHHH-HHHcCCC--------
Confidence 32222222234568999999998899999999999999999999 9999864332 11111 1111100
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
. ..+......+.+++.+|++.+|++||++.++++.|++.
T Consensus 223 ~----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 M----PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred C----CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0 01112234688999999999999999999999999863
No 71
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.9e-36 Score=345.73 Aligned_cols=263 Identities=24% Similarity=0.362 Sum_probs=208.9
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEE
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFC 877 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 877 (1114)
....++|++.++||+|+||+||+|++. .+..||||++..... ....+.+.+|+.+++++. ||||+++++++
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR--SSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 344678999999999999999999863 234799999965433 233567889999999996 99999999999
Q ss_pred EecCceEEEEecCCCCCHHHHhccCC------------------------------------------------------
Q 001253 878 YHQGSNLLMYEYMARGSLGELLHGAS------------------------------------------------------ 903 (1114)
Q Consensus 878 ~~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------ 903 (1114)
.+.+..|+||||+++|+|.++++...
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 99999999999999999999886321
Q ss_pred -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 001253 904 -----------------------------------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNN 942 (1114)
Q Consensus 904 -----------------------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 942 (1114)
..+++..+..++.|+++|++|||+. +|+||||||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~N 267 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARN 267 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHh
Confidence 2467888899999999999999998 99999999999
Q ss_pred eEECCCCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCC
Q 001253 943 ILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGG 1020 (1114)
Q Consensus 943 ill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~ 1020 (1114)
|++++++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 9999999999999999986532222 12233457788999999999899999999999999999997 999987543322
Q ss_pred CHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001253 1021 DLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNR 1088 (1114)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1088 (1114)
.....+ .... +. ..+......+.+++.+||+.||++||++.+|.+.|+++..
T Consensus 348 ~~~~~~----~~~~--------~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 TFYNKI----KSGY--------RM----AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHHHH----hcCC--------CC----CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 222211 1110 00 1111233568899999999999999999999999998643
No 72
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-37 Score=300.26 Aligned_cols=263 Identities=25% Similarity=0.359 Sum_probs=211.3
Q ss_pred HHhcCCcCCceecccCCeEEEEEE-eCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC---
Q 001253 806 VATDNFDERFVIGRGACGTVYRAV-LRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG--- 881 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 881 (1114)
+..++|++.+.+|+|+|+-||.+. ..+++.||+|++..... +..+...+|++..++++||||++++++...+.
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~---~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ---EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccch---HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 445789999999999999999999 45789999999976553 23566788999999999999999999875433
Q ss_pred --ceEEEEecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeec
Q 001253 882 --SNLLMYEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDF 956 (1114)
Q Consensus 882 --~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 956 (1114)
..|++++|...|+|.+.+.. .+..+++.+.++|+.++++||++||+. .++++||||||.||++.+++.+++.||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence 47999999999999998863 445899999999999999999999997 346999999999999999999999999
Q ss_pred cCceecCCCCCCc--------cccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHH
Q 001253 957 GLAKVIDMPQSKS--------MSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTW 1025 (1114)
Q Consensus 957 G~a~~~~~~~~~~--------~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~ 1025 (1114)
|.++......... ......|..|+|||.+. +...+.++|||||||++|+|+.|..||+...+.+
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G----- 248 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG----- 248 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC-----
Confidence 9997653221111 11234688999999885 4457789999999999999999999997433222
Q ss_pred HHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1026 VRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
+...-++..+.+......+ .+..+.+++++|++.||.+||+..+++..++++
T Consensus 249 -------gSlaLAv~n~q~s~P~~~~--yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 249 -------GSLALAVQNAQISIPNSSR--YSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -------CeEEEeeeccccccCCCCC--ccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 2333334444444333333 556789999999999999999999999998875
No 73
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-38 Score=316.10 Aligned_cols=249 Identities=25% Similarity=0.387 Sum_probs=212.6
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+-|.++.+||+|+||.||+|.++ +|..+|||++..... .+++..|+.++++++.|+||++||.|......++||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-----LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM 107 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-----LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM 107 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-----HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence 34777889999999999999977 799999999876544 677889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|||.-|+..|+++-+.+.+++.++..+.+..++||+|||-. .-+|||||+.|||++.+|.+|++|||.|..+.+ .-
T Consensus 108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-TM 183 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-TM 183 (502)
T ss_pred hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhh-hH
Confidence 99999999999998889999999999999999999999998 889999999999999999999999999987642 23
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
....++.|||.|||||++..-.|+.++||||+|++..||..|++||.+..+-.. -.+........
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA---------------IFMIPT~PPPT 248 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA---------------IFMIPTKPPPT 248 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce---------------eEeccCCCCCC
Confidence 445678899999999999999999999999999999999999999975543110 01111111111
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+.....++-++++.|+-..|++|.|+.++++
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 2335566678999999999999999999987764
No 74
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.9e-36 Score=328.23 Aligned_cols=252 Identities=23% Similarity=0.375 Sum_probs=204.8
Q ss_pred cCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
++|++.+.||+|+||+||+|.++++..||+|.+...... ...+.+|+.++++++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 568888999999999999999887778999998744322 4568899999999999999999999998889999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++|+|.+++......+++.++..++.|++.|++|||+. +++|+||||+||++++++.+||+|||.++....+...
T Consensus 80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 9999999999986556789999999999999999999998 9999999999999999999999999999865433222
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
......++..|+|||...+..++.++|||||||++|||++ |..||..... ...... +..... .
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~----~~~~~~-~~~~~~-----~------ 220 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN----SETVEK-VSQGLR-----L------ 220 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH----HHHHHH-HhcCCC-----C------
Confidence 2222345678999999988889999999999999999998 9999864332 111111 111110 0
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
..+......+.+++.+||+.+|++||++.++++.++
T Consensus 221 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 -YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 001112356889999999999999999999998764
No 75
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=349.87 Aligned_cols=268 Identities=22% Similarity=0.285 Sum_probs=218.8
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCC-cEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeE-EEe---
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTG-HTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGF-CYH--- 879 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~--- 879 (1114)
+...++++.++|.+|||+.||.|++..+ ..||+|++... ++...+.+++|+.+|+.++ |+|||.+++. ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 5567888999999999999999998755 99999998765 3455788999999999997 9999999993 321
Q ss_pred ---cCceEEEEecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEee
Q 001253 880 ---QGSNLLMYEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGD 955 (1114)
Q Consensus 880 ---~~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 955 (1114)
.-++++.||||.||.|-|++..+ ...+++.++++|+.++++|+++||.. +++|||||||-+|||++.++..||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 13567999999999999999733 33699999999999999999999986 78899999999999999999999999
Q ss_pred ccCceecCCCCCCc--c------ccccccccccCcccc---ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHH
Q 001253 956 FGLAKVIDMPQSKS--M------SAIAGSYGYIAPEYA---YTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVT 1024 (1114)
Q Consensus 956 fG~a~~~~~~~~~~--~------~~~~g~~~y~aPE~~---~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~ 1024 (1114)
||.|...-...... . -...-|+.|+|||++ .+.+++.|+||||+||+||-++....||+....
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------ 263 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------ 263 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc------
Confidence 99997432222111 0 123578999999987 478899999999999999999999999975422
Q ss_pred HHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCccccc
Q 001253 1025 WVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSP 1097 (1114)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~ 1097 (1114)
-++....+.+ +........+.++|+.||++||.+||++.||+..+.+++.+.-+....+
T Consensus 264 ------------laIlng~Y~~--P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 264 ------------LAILNGNYSF--PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred ------------eeEEeccccC--CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence 1223333332 2234566789999999999999999999999999999988877776655
No 76
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=344.61 Aligned_cols=248 Identities=21% Similarity=0.267 Sum_probs=202.7
Q ss_pred hcCCcCCceecccCCeEEEEEEeCC--CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRT--GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
.++|++.++||+|+||.||+|.++. +..||+|++...........+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3579999999999999999998652 36899999976543333345668889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~- 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT- 183 (340)
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence 99999999999999743 4689999999999999999999998 999999999999999999999999999987542
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+..... . ..
T Consensus 184 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~i~~~-~---------~~ 246 (340)
T PTZ00426 184 ---RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP----LLIYQKILEG-I---------IY 246 (340)
T ss_pred ---CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH----HHHHHHHhcC-C---------CC
Confidence 12345799999999999998899999999999999999999999974332 1112221111 1 11
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
.+......+.+++.+|++.||++|+ +++|+++
T Consensus 247 ----~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 247 ----FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ----CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 1111223577899999999999995 7888764
No 77
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.9e-35 Score=325.97 Aligned_cols=261 Identities=21% Similarity=0.312 Sum_probs=212.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||.||+|+.+ +++.||||++.............+..|+.+++.++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999975 78999999987654444555667889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 888 EYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 888 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988852 234688999999999999999999998 999999999999999999999999999887542
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
.. .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... +...+... +..... +
T Consensus 159 ~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~--~~~~~~~~-~~~~~~------~-- 226 (267)
T cd08228 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLFSLCQK-IEQCDY------P-- 226 (267)
T ss_pred hh-HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc--cHHHHHHH-HhcCCC------C--
Confidence 22 122345688899999999888899999999999999999999999864322 22222222 111110 0
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
..........+.+++.+||+.+|++||++.++++.+++++
T Consensus 227 ---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 227 ---PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ---CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1111223356889999999999999999999999998864
No 78
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-36 Score=341.34 Aligned_cols=241 Identities=23% Similarity=0.270 Sum_probs=196.4
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
||+|+||+||+|+.. +++.||+|++.............+.+|+.++++++||||+++++++...+..|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999976 6889999999765433333456678899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccc
Q 001253 896 GELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAG 975 (1114)
Q Consensus 896 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g 975 (1114)
.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.... .........|
T Consensus 81 ~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~g 155 (312)
T cd05585 81 FHHLQR-EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMK-DDDKTNTFCG 155 (312)
T ss_pred HHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCcc-CCCccccccC
Confidence 999974 34689999999999999999999998 999999999999999999999999999985322 2223345679
Q ss_pred cccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHH
Q 001253 976 SYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHM 1055 (1114)
Q Consensus 976 ~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1114)
|+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..+...... . ..+....
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~----~~~~~~~~~~~~----------~----~~~~~~~ 217 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN----VNEMYRKILQEP----------L----RFPDGFD 217 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC----HHHHHHHHHcCC----------C----CCCCcCC
Confidence 999999999999999999999999999999999999997432 223333322211 1 1111223
Q ss_pred HHHHHHHhhccCCCCCCCCC---HHHHH
Q 001253 1056 ITVLKIAMLCTNISPFDRPT---MREVV 1080 (1114)
Q Consensus 1056 ~~l~~li~~cl~~dP~~RPs---~~evl 1080 (1114)
..+.+++.+||+.||.+||+ +.|++
T Consensus 218 ~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 218 RDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 46789999999999999985 45554
No 79
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.3e-36 Score=341.40 Aligned_cols=244 Identities=21% Similarity=0.255 Sum_probs=199.8
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARG 893 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 893 (1114)
++||+|+||+||+|+.+ +|+.||+|++.............+.+|+.+++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999976 78999999998654444444567788999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccc
Q 001253 894 SLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAI 973 (1114)
Q Consensus 894 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 973 (1114)
+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.... ........
T Consensus 81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~-~~~~~~~~ 155 (328)
T cd05593 81 ELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT-DAATMKTF 155 (328)
T ss_pred CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCC-cccccccc
Confidence 99998874 34789999999999999999999998 999999999999999999999999999875322 22223456
Q ss_pred cccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHH
Q 001253 974 AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVS 1053 (1114)
Q Consensus 974 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1114)
+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+..... .. ..+..
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~----~~~~~~~~~~----------~~----~~p~~ 217 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELILME----------DI----KFPRT 217 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH----HHHHHHhccC----------Cc----cCCCC
Confidence 799999999999998999999999999999999999999964321 2222221111 00 11112
Q ss_pred HHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1054 HMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1054 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
....+.+++.+||+.||++|| ++.|+++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 234678899999999999997 8898875
No 80
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9e-36 Score=338.70 Aligned_cols=264 Identities=23% Similarity=0.358 Sum_probs=205.5
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|++.+.||+|+||.||+|+++ +|..||+|++..... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 478999999999999999999976 688999999875432 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++|+|.+++.. ...+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 156 (331)
T cd06649 82 MEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 156 (331)
T ss_pred eecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc--
Confidence 999999999999974 346889999999999999999999852 699999999999999999999999999976532
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc--c--------
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL--V-------- 1036 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~-------- 1036 (1114)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||...+. ..+...+......... .
T Consensus 157 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 157 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA-KELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred -cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHhcccccccccCCccccCcccc
Confidence 222345799999999999999999999999999999999999999964332 1111111100000000 0
Q ss_pred -----------------------cccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1037 -----------------------SGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1037 -----------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
+.+...... .........++.+++.+||++||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPP--KLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCc--CCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000 00011234568899999999999999999999764
No 81
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-35 Score=330.85 Aligned_cols=253 Identities=26% Similarity=0.318 Sum_probs=203.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.|++.++||+|+||+||++... +++.||+|++.............+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3778899999999999999975 789999999976543333334557789999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||++..... .
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~--~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPE--G 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCC--C
Confidence 99999999988643 34689999999999999999999998 999999999999999999999999999986532 2
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||......... ..+...+....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~------------- 221 (285)
T cd05605 156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVKEDQ------------- 221 (285)
T ss_pred CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhhhcc-------------
Confidence 2223457899999999999888999999999999999999999999754432211 11222111110
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
...+......+.+++.+||+.||++|| +++++++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 111122344678999999999999999 7777654
No 82
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=340.61 Aligned_cols=261 Identities=25% Similarity=0.402 Sum_probs=216.9
Q ss_pred CCcCCceecccCCeEEEEEEeC-CC----cEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TG----HTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
..+..++||+|+||+||+|.|- .| -+||||++...... ....++.+|+..|.+++|||+++++++|.... ..
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~--~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP--KASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc--hhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 4566789999999999999974 34 36899998765443 33567899999999999999999999998766 78
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+|++||+.|+|.|+++.++..+..+..+.|..|||+||.|||.+ ++|||||.++||||.+-..+|+.|||+|+....
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 99999999999999999899999999999999999999999998 999999999999999999999999999997653
Q ss_pred CCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 965 PQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 965 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
... .......-++.|||-|.+....|+.++|||||||++||++| |..||..... +.+.+.++.++-
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-----~eI~dlle~geR------- 918 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-----EEIPDLLEKGER------- 918 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-----HHhhHHHhcccc-------
Confidence 322 23333445678999999999999999999999999999998 9999976543 334444444321
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCc
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHF 1093 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 1093 (1114)
-..++-...+++.++.+||..|+..||+|+++..++.+..+--.++
T Consensus 919 -----LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqry 964 (1177)
T KOG1025|consen 919 -----LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRY 964 (1177)
T ss_pred -----CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceE
Confidence 2234445667899999999999999999999999999875544443
No 83
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.9e-36 Score=341.26 Aligned_cols=244 Identities=22% Similarity=0.249 Sum_probs=198.7
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARG 893 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 893 (1114)
+.||+|+||.||+|+.+ +|+.||+|++.............+.+|+.+++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999975 78999999998654433334556778999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccc
Q 001253 894 SLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAI 973 (1114)
Q Consensus 894 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 973 (1114)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..... ........
T Consensus 81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~-~~~~~~~~ 155 (323)
T cd05595 81 ELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKTF 155 (323)
T ss_pred cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccC-CCCccccc
Confidence 99998874 34789999999999999999999998 999999999999999999999999999875321 22233446
Q ss_pred cccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHH
Q 001253 974 AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVS 1053 (1114)
Q Consensus 974 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1114)
.|++.|+|||++.+..++.++||||+||++|||++|+.||..... ....+...... .. .+..
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~----~~~~~~~~~~~----------~~----~p~~ 217 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----ERLFELILMEE----------IR----FPRT 217 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCC----------CC----CCCC
Confidence 799999999999999999999999999999999999999964332 11122211110 00 1112
Q ss_pred HHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1054 HMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1054 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
....+.+++.+||+.||.+|| ++.++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 234678999999999999998 7888765
No 84
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-36 Score=334.40 Aligned_cols=253 Identities=25% Similarity=0.327 Sum_probs=216.7
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 885 (1114)
.+.|++.+.||+|.||.||+|+.+ +|+.+|+|++.+...........+.+|+.+++++. |||||.++++|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 367888899999999999999987 59999999998877655445678999999999998 9999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC----CCeEEeeccCcee
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK----FEAHVGDFGLAKV 961 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfG~a~~ 961 (1114)
|||+++||.|.+.+... .+++..+..++.|++.|+.|||+. ||+|||+||+|+|+... +.+|++|||+|..
T Consensus 114 vmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred EEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 99999999999998755 399999999999999999999998 99999999999999643 5799999999998
Q ss_pred cCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
... .......+||+.|+|||++...+|+..+||||+||++|.|++|.+||.+......... +..+
T Consensus 189 ~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~-----i~~~-------- 253 (382)
T KOG0032|consen 189 IKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLA-----ILRG-------- 253 (382)
T ss_pred ccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHH-----HHcC--------
Confidence 764 5567788999999999999999999999999999999999999999986554333221 1111
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.+....+........+.+++++|+..||.+|+|+.++++
T Consensus 254 -~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 254 -DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 112223333344567889999999999999999999998
No 85
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.4e-36 Score=330.15 Aligned_cols=255 Identities=24% Similarity=0.399 Sum_probs=206.7
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
..+|++.++||+|+||.||+|.++ +++.||+|++..... ....+.+|+.++++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch----HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence 356888899999999999999976 588999999864322 245688899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 887 YEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|||+++++|.+++... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 9999999999998743 34689999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
.........++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+..+.. ... + .
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~----~~~~~~~-~~~-~-----~--- 223 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVYELL-EKG-Y-----R--- 223 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHH-HCC-C-----C---
Confidence 2222222335678999999998999999999999999999998 8899864322 2222221 110 0 0
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
...+......+.+++.+||+.||++||++.+++++|+.+
T Consensus 224 ---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 224 ---MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111122235688999999999999999999999999875
No 86
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.8e-36 Score=348.17 Aligned_cols=255 Identities=28% Similarity=0.331 Sum_probs=207.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||+||+|+.. +|+.||||++.............+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999976 78999999998654333344567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC-
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ- 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~- 966 (1114)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999999854 6789999999999999999999998 99999999999999999999999999998654332
Q ss_pred ---------------------------CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC
Q 001253 967 ---------------------------SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQG 1019 (1114)
Q Consensus 967 ---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~ 1019 (1114)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~- 235 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL- 235 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH-
Confidence 1123345799999999999999999999999999999999999999975432
Q ss_pred CCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHH
Q 001253 1020 GDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPT-MREVVLM 1082 (1114)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 1082 (1114)
........... ....... .......+.+++.+|+. ||.+||+ ++|+++.
T Consensus 236 ---~~~~~~i~~~~--------~~~~~p~--~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 ---QETYNKIINWK--------ESLRFPP--DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ---HHHHHHHhccC--------CcccCCC--CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11222211100 0000001 11124568889999997 9999999 9999863
No 87
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.8e-36 Score=330.36 Aligned_cols=257 Identities=26% Similarity=0.435 Sum_probs=210.5
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
.+..+|++.++||+|+||+||+|.+++++.+|+|++...... ....+..|+.+++.++||||+++++++...+..++
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLL---KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchh---hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 345679999999999999999999988999999998754432 24568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
||||+++++|.++++.. ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+.....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999999999753 34689999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
.... .....++..|+|||...+..++.++||||||+++|+|++ |+.||...... +..+...... +
T Consensus 157 ~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~----~~~~~~~~~~---------~ 222 (261)
T cd05148 157 DVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH----EVYDQITAGY---------R 222 (261)
T ss_pred cccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH----HHHHHHHhCC---------c
Confidence 2222 223446778999999988889999999999999999998 89999654321 1111111110 0
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
...+......+.+++.+||+.||++|||++++++.|+.+
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 ----MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 111122334688999999999999999999999999863
No 88
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.4e-36 Score=347.87 Aligned_cols=256 Identities=22% Similarity=0.264 Sum_probs=204.4
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
..++|++.++||+|+||+||+|+.+ +++.||+|++...........+.+..|+.+++.++||||+++++++.++...|+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3468999999999999999999976 689999999975433222334557789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999974 3578888999999999999999998 9999999999999999999999999999876433
Q ss_pred CCCccccccccccccCccccccC----CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTM----KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
.........||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ............
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----~~~~~~i~~~~~------- 264 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----VGTYSKIMDHKN------- 264 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH----HHHHHHHHcCCC-------
Confidence 22233456799999999998653 378899999999999999999999975332 222222221110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFD--RPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1081 (1114)
.+. .+........+.+++.+|++.+|.+ ||++.|+++
T Consensus 265 -~~~--~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 265 -SLT--FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred -cCC--CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 011 0111122346788999999999988 999999965
No 89
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=334.42 Aligned_cols=248 Identities=27% Similarity=0.390 Sum_probs=209.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.-|...+.||+|+||.||-|++. +.+.||||++.-......+.-+++..|+..+++++|||++.+.|+|..+...|+||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 34666788999999999999965 78899999998776666677788999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|||-| +-.|++.-..+++.+.++..|+.+.+.||+|||+. +.||||||+.|||+++.|.|||+|||.|....
T Consensus 106 EYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~---- 177 (948)
T KOG0577|consen 106 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMA---- 177 (948)
T ss_pred HHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcC----
Confidence 99966 99999887778899999999999999999999999 99999999999999999999999999998754
Q ss_pred CccccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
...+++|||+|||||++. .+.|+-|+||||+|++..|+..+++|+..+..-..++.+ ..+. .+.+
T Consensus 178 -PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI----AQNe-------sPtL 245 (948)
T KOG0577|consen 178 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNE-------SPTL 245 (948)
T ss_pred -chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH----HhcC-------CCCC
Confidence 235679999999999985 567999999999999999999999998755432222211 1111 1111
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+....+..|+..|++.-|.+|||.+++++
T Consensus 246 -----qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 246 -----QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -----CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 13345567889999999999999999987764
No 90
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.8e-36 Score=345.66 Aligned_cols=258 Identities=22% Similarity=0.276 Sum_probs=204.0
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
...++|++.++||+|+||.||+|+.+ +++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+++..|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999976 68899999997543333333556788999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|.....
T Consensus 120 lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 99999999999999974 3578899999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCccccccccccccCccccccCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMK----VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
.........+||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ............
T Consensus 195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~----~~~~~~i~~~~~------ 264 (370)
T cd05621 195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL----VGTYSKIMDHKN------ 264 (370)
T ss_pred CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCc------
Confidence 3333334567999999999987543 77899999999999999999999975432 222222221110
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFD--RPTMREVVLM 1082 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 1082 (1114)
.+. .+........+.+++.+|+..+|.+ ||++.|+++.
T Consensus 265 --~~~--~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 265 --SLN--FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred --ccC--CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 011 1111223345778888999855543 8899998774
No 91
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.9e-36 Score=325.95 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=203.7
Q ss_pred cCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.+|++.+.||+|+||.||+|.++++..+|+|++...... ...+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 457888999999999999999887788999998644322 3467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++++|.+++......+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 9999999999986666789999999999999999999998 9999999999999999999999999999865432222
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... +.... +.... .
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~-~~~~~------~------ 219 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS----EVVES-VSAGY------R------ 219 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH----HHHHH-HHcCC------c------
Confidence 2222234568999999998899999999999999999999 78888643321 11111 11110 0
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
...+......+.+++.+||+.+|++|||+.|+++.|
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 220 LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 011112344688999999999999999999999886
No 92
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.9e-36 Score=341.24 Aligned_cols=255 Identities=22% Similarity=0.248 Sum_probs=207.2
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||+||+|+.+ +|+.||+|+++..........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999976 78999999998665444445667889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 99999999999987667899999999999999999999998 999999999999999999999999999987643333
Q ss_pred CccccccccccccCccccc------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY------TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~------~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
.......||+.|+|||++. ...++.++||||+||++|||++|+.||..... ..............
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~----~~~~~~i~~~~~~~----- 228 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS----AKTYNNIMNFQRFL----- 228 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH----HHHHHHHHcCCCcc-----
Confidence 2333457999999999986 45678899999999999999999999964332 22222222211110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
. .+........+.+++.+|++ +|.+||++.++++
T Consensus 229 ---~--~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 229 ---K--FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ---C--CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 01111223467889999998 9999999999874
No 93
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-35 Score=338.49 Aligned_cols=254 Identities=23% Similarity=0.240 Sum_probs=202.3
Q ss_pred CCcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCC-CChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCce
Q 001253 810 NFDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNRE-GNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 883 (1114)
+|++.++||+|+||+||+|+.. +++.||+|++.+... ......+.+..|+.+++.+ +||+|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788899999999999999853 688999999975432 1222345678899999999 589999999999999999
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 81 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 999999999999999874 34689999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
...........||+.|+|||++.+. .++.++|||||||++|||++|+.||.............+...... .
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~--------~ 228 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD--------P 228 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC--------C
Confidence 3333333456799999999998865 478899999999999999999999975443333333222222111 1
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
..+......+.+++.+||+.||++|| +++++++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 229 ------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11112234678899999999999999 6667764
No 94
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6.9e-36 Score=346.28 Aligned_cols=254 Identities=24% Similarity=0.286 Sum_probs=199.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.|+.+++||+|+||+||+|+.+ +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888899999999999999975 788999999976544444445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS- 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~- 967 (1114)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 99999999999743 4688899999999999999999998 999999999999999999999999999754311000
Q ss_pred ---------------------------------------------CccccccccccccCccccccCCCCcccchHHHHHH
Q 001253 968 ---------------------------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVV 1002 (1114)
Q Consensus 968 ---------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvi 1002 (1114)
......+||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00123579999999999999899999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhh--ccCCCCCCCCCHHHHH
Q 001253 1003 LLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAML--CTNISPFDRPTMREVV 1080 (1114)
Q Consensus 1003 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~evl 1080 (1114)
+|||++|+.||........ ........ .... .+.......++.+++.+ |+..+|.+||+++|++
T Consensus 238 l~elltG~~Pf~~~~~~~~----~~~i~~~~--------~~~~--~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTET----QLKVINWE--------NTLH--IPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred HHHHHhCCCCCcCCCHHHH----HHHHHccc--------cccC--CCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 9999999999975432111 11111100 0000 01111123456677777 5566677799999997
Q ss_pred H
Q 001253 1081 L 1081 (1114)
Q Consensus 1081 ~ 1081 (1114)
+
T Consensus 304 ~ 304 (381)
T cd05626 304 A 304 (381)
T ss_pred c
Confidence 6
No 95
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.7e-36 Score=330.53 Aligned_cols=249 Identities=34% Similarity=0.542 Sum_probs=195.2
Q ss_pred CCceecccCCeEEEEEEeC-----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 813 ERFVIGRGACGTVYRAVLR-----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 813 ~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
..+.||.|+||.||+|.++ .+..|+||+++.. ...+..+.+.+|++.+++++||||++++|++...+..++||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccccccccc
Confidence 4568999999999999976 3568999999543 23334678899999999999999999999999888899999
Q ss_pred ecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||+++|+|.++++.. ...+++.++..|+.|+++||+|||+. +++|+||+++||++++++.+||+|||++.......
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 999999999999876 66899999999999999999999998 99999999999999999999999999998762221
Q ss_pred C-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 967 S-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 967 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
. ...........|+|||.+.+..++.++||||||+++||+++ |+.||... ...+..... ..+...
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~----~~~~~~~~~-~~~~~~-------- 224 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY----DNEEIIEKL-KQGQRL-------- 224 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS----CHHHHHHHH-HTTEET--------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccc-cccccc--------
Confidence 1 22233457789999999999889999999999999999999 67888643 222333332 221111
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
..+......+.+++.+||+.||++||++.++++.|
T Consensus 225 ----~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 ----PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11112234688999999999999999999999876
No 96
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.7e-35 Score=326.26 Aligned_cols=256 Identities=24% Similarity=0.401 Sum_probs=207.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
++|++.+.||+|+||+||+|.++ +...||||+++.... ......+.+|+..++.++||||+++++++...+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS--DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 57899999999999999999975 245799999865432 233567888999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+||||+++++|.+++......+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||+++....
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 99999999999999987666899999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 965 PQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 965 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.... ......++..|+|||.+.+..++.++||||||+++|||++ |..||..... .+.. ..+.....
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~----~~~~-~~~~~~~~------- 226 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN----QDVI-KAVEDGYR------- 226 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH----HHHH-HHHHcCCC-------
Confidence 2211 1122345678999999998899999999999999999998 9999864332 1111 11111100
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.+.+......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 227 -----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 227 -----LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 001112234688999999999999999999999999875
No 97
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7.2e-36 Score=339.54 Aligned_cols=262 Identities=26% Similarity=0.411 Sum_probs=206.4
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCY 878 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 878 (1114)
+..++|++.++||+|+||.||+|+.. +++.||+|++..... ....+.+..|+.++.++ +|+||++++++|.
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 44578999999999999999999742 357899999875432 22345677899999999 8999999999886
Q ss_pred ec-CceEEEEecCCCCCHHHHhccCC------------------------------------------------------
Q 001253 879 HQ-GSNLLMYEYMARGSLGELLHGAS------------------------------------------------------ 903 (1114)
Q Consensus 879 ~~-~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------ 903 (1114)
.. ...+++|||+++++|.+++....
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 54 56789999999999999985321
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-Ccccccccc
Q 001253 904 ------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAGS 976 (1114)
Q Consensus 904 ------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~ 976 (1114)
..+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+|||+++.+..... .......++
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~ 238 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 238 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCC
Confidence 2678999999999999999999998 999999999999999999999999999986532222 122234567
Q ss_pred ccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHH
Q 001253 977 YGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHM 1055 (1114)
Q Consensus 977 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1114)
..|+|||++.+..++.++||||+||++|||++ |..||......+.....+ ..... ...+....
T Consensus 239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~----~~~~~------------~~~~~~~~ 302 (337)
T cd05054 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL----KEGTR------------MRAPEYAT 302 (337)
T ss_pred ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH----hccCC------------CCCCccCC
Confidence 78999999999999999999999999999998 999997543322222221 11110 00111223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001253 1056 ITVLKIAMLCTNISPFDRPTMREVVLMLSESNR 1088 (1114)
Q Consensus 1056 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1088 (1114)
..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 468899999999999999999999999998754
No 98
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.8e-35 Score=328.13 Aligned_cols=247 Identities=23% Similarity=0.272 Sum_probs=197.0
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
||+|+||+||+|.++ +|+.||+|++...........+.+..|+.+++.++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999976 7899999998765433333345677899999999999999999999999999999999999999
Q ss_pred HHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 896 GELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 896 ~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-~~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-SKTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCC-ccccc
Confidence 988743 334689999999999999999999998 99999999999999999999999999998654322 22334
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..|++.|+|||++.+..++.++||||+||++|||++|+.||.............+. ... .. ...+.
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~---------~~----~~~~~ 222 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR-ILN---------DS----VTYPD 222 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh-hcc---------cC----CCCcc
Confidence 57899999999999999999999999999999999999999754432221111111 110 00 11112
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
.....+.+++.+||+.||++|| +++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 2334688999999999999999 5566654
No 99
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=301.96 Aligned_cols=253 Identities=26% Similarity=0.438 Sum_probs=208.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCC--C---hhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecC
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREG--N---NNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 881 (1114)
..|.-.+.+|+|..++|.++..+ +|..+|+|++...... . .+..++-..|+.+++++ .||+|+++.++|+.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 45677788999999999999876 7889999998644322 1 12234456789999988 6999999999999999
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..++|+|.|+.|.|.|++. ..-.++++...+|++|+.+|++|||.. .|||||+||+|||++++.++||+|||+|+.
T Consensus 97 F~FlVFdl~prGELFDyLt-s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLT-SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred hhhhhhhhcccchHHHHhh-hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeec
Confidence 9999999999999999997 344789999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCCccccccccccccCcccccc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYT------MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL 1035 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1114)
+. ........+|||+|.|||.+.. ..|+..+|+||+||++|.++.|.+||.+..+- . +
T Consensus 173 l~--~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm-----l---------M 236 (411)
T KOG0599|consen 173 LE--PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM-----L---------M 236 (411)
T ss_pred cC--CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH-----H---------H
Confidence 64 5566678899999999998853 45788999999999999999999999643321 0 1
Q ss_pred ccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1036 VSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...++.+.+.+..+.-.....++.++|.+|++.||++|.|++|+++
T Consensus 237 LR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 237 LRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1112233334444444556667889999999999999999999975
No 100
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=9.1e-36 Score=337.79 Aligned_cols=247 Identities=25% Similarity=0.319 Sum_probs=196.8
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHH---hcCCCCceeeEEeEEEecCceEEE
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTL---GKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
|++.+.||+|+||+||+|.++ +|+.||||+++..........+.+..|+.++ +.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999976 7899999999765432223344566666554 567899999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++|+|..+++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.... .
T Consensus 81 ~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~-~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG-F 154 (324)
T ss_pred EcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC-C
Confidence 99999999999886 34689999999999999999999998 999999999999999999999999999875321 2
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
.......+|++.|+|||++.+..++.++|||||||++|||++|+.||..... .+.......... .
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~----~~~~~~i~~~~~----------~- 219 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE----EEVFDSIVNDEV----------R- 219 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCC----------C-
Confidence 2233456799999999999999999999999999999999999999974332 222222221110 0
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPT-----MREVVL 1081 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1081 (1114)
.+......+.+++.+||+.||.+||+ +.++++
T Consensus 220 ---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 220 ---YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 11112345788999999999999994 555554
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-35 Score=340.74 Aligned_cols=260 Identities=21% Similarity=0.241 Sum_probs=198.9
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
..+|++.++||+|+||.||+|++. +++.||+|+.. .+.+.+|+.++++++||||+++++++......++|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 467999999999999999999975 78999999743 22367899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||++. ++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 162 ~e~~~-~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 162 LPRYK-TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 99996 5888888643 4688999999999999999999998 99999999999999999999999999997543223
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC---CHHHHHHHHHhcCC-----c---
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGG---DLVTWVRNFIRNNS-----L--- 1035 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~-----~--- 1035 (1114)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....... +....++..+.... +
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 333445679999999999999999999999999999999999998875432111 11111111111000 0
Q ss_pred ----ccccc-------cccccCCC--cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1036 ----VSGML-------DARLNLQD--EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1036 ----~~~~~-------~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....+ ........ .........+.+++.+||++||++|||++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000 00000000 001123446889999999999999999999984
No 102
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8e-36 Score=335.18 Aligned_cols=199 Identities=28% Similarity=0.375 Sum_probs=173.3
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CC-----ceeeEEeEEEec
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HR-----NIVKLYGFCYHQ 880 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~ 880 (1114)
..+|.+.+.||+|+||.|.+|.+. +++.||||+++..... .++-..|+.++..++ |. |+|+++++|...
T Consensus 185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f----~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF----LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH----HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 348999999999999999999965 7999999999866543 445567999999997 53 899999999999
Q ss_pred CceEEEEecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC--CeEEeecc
Q 001253 881 GSNLLMYEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF--EAHVGDFG 957 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~--~~kl~DfG 957 (1114)
++.|+|+|.++. +|+++++.+. ..++...+..++.||+.||.+||+. +|||+||||+|||+.+.+ .|||+|||
T Consensus 261 ~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFG 336 (586)
T KOG0667|consen 261 NHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFG 336 (586)
T ss_pred cceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecc
Confidence 999999999976 9999998543 4789999999999999999999998 999999999999997644 69999999
Q ss_pred CceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 001253 958 LAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQ 1018 (1114)
Q Consensus 958 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~ 1018 (1114)
.|+... ....+...+..|+|||++.+.+|+.+.||||||||++||++|.+.|++...
T Consensus 337 SSc~~~----q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 337 SSCFES----QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred cccccC----CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 999743 223367889999999999999999999999999999999999777765443
No 103
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.2e-35 Score=336.92 Aligned_cols=244 Identities=22% Similarity=0.296 Sum_probs=195.5
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+||+||+|+.+ +++.||+|++++.........+.+..|+.++.++ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 6889999999876544444455677888888776 899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~-~~~~~~~ 155 (329)
T cd05618 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTST 155 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccC-CCCcccc
Confidence 999998864 34789999999999999999999998 999999999999999999999999999875322 2222345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC----CCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQG----GDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....++.+.+.... .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---------~---- 222 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---------I---- 222 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---------C----
Confidence 67999999999999999999999999999999999999999643211 112223322222111 0
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
..+......+.+++.+||+.||++||++
T Consensus 223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1112223467899999999999999984
No 104
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.3e-35 Score=338.53 Aligned_cols=248 Identities=28% Similarity=0.419 Sum_probs=195.9
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..++||+|+||+||+|+++ +|+.||||++..... ....+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE--DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc--HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 45667789999999999999976 789999999865432 234567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+.. ..++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 152 e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 152 EFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred ecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 999999987532 356778889999999999999998 99999999999999999999999999998754221
Q ss_pred CccccccccccccCcccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.......|+..|+|||++.. ...+.++|||||||++|||++|+.||..... .++...........
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-~~~~~~~~~~~~~~--------- 292 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-GDWASLMCAICMSQ--------- 292 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-ccHHHHHHHHhccC---------
Confidence 22234579999999998743 2345689999999999999999999973322 22222222111110
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...........+.+++.+||+.||++||++.|+++
T Consensus 293 ----~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 293 ----PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred ----CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111223346889999999999999999999986
No 105
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.3e-35 Score=323.98 Aligned_cols=254 Identities=27% Similarity=0.438 Sum_probs=205.3
Q ss_pred HhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
..++|++.++||+|+||.||+|.++++..||+|.+...... .+.+.+|+.++++++|++++++++++. ....++|
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv 78 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV 78 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence 34678999999999999999999888889999998764432 356889999999999999999999875 4568999
Q ss_pred EecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 887 YEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|||+++++|.++++.. ...+++.++..++.+++.|++|||+. +++||||||+||++++++.++|+|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 9999999999999753 34689999999999999999999998 9999999999999999999999999999875433
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
.........++..|+|||+..+..++.++||||||+++|||++ |..||..... .+..........
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~----~~~~~~~~~~~~---------- 221 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN----REVLEQVERGYR---------- 221 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH----HHHHHHHHcCCC----------
Confidence 2222223345678999999988889999999999999999999 8888864332 122222111100
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
.+.+......+.+++.+|++.+|.+|||++++.+.|++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 ---MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01111223468899999999999999999999999875
No 106
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.3e-35 Score=323.86 Aligned_cols=255 Identities=25% Similarity=0.428 Sum_probs=206.5
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
+..++|++.++||+|+||+||+|..++++.||+|.+...... ..++.+|+.++++++|||++++++++. .+..++
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEE
Confidence 345789999999999999999999988999999998754432 456889999999999999999999874 457899
Q ss_pred EEecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
||||+++++|.+++... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 99999999999998643 34789999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
..........++..|+|||++.+..++.++||||||+++||+++ |+.||..... ....+.. .... .
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~-~~~~--------~ 221 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN----PEVIQNL-ERGY--------R 221 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh----HHHHHHH-HcCC--------C
Confidence 22222233456788999999998889999999999999999999 9999975432 1112111 1110 0
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
. +.+......+.+++.+||+.+|++||+++++++.|+.
T Consensus 222 ~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 M----PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred C----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0 0111123468899999999999999999999999875
No 107
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.1e-35 Score=324.38 Aligned_cols=254 Identities=26% Similarity=0.423 Sum_probs=205.0
Q ss_pred hcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.++|++.++||+|+||+||+|+++++..||+|++...... .+.+.+|++++++++||||+++++++. .+..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT 79 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence 4679999999999999999999887778999998753321 356889999999999999999999875 45679999
Q ss_pred ecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||+++|+|.+++... ...+++..+..++.|+++||+|+|+. +++||||||+||++++++.++|+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 999999999999753 34689999999999999999999998 99999999999999999999999999998765333
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
........++..|+|||+..+..++.++||||+|+++|||++ |..||...... ..... ..... .
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~----~~~~~-~~~~~--------~-- 221 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQ-VERGY--------R-- 221 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH----HHHHH-HhcCC--------C--
Confidence 222233456778999999988899999999999999999999 78888643321 11111 11100 0
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
..........+.+++.+|++.||++||++.++++.|++.
T Consensus 222 --~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 222 --MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 011123345688999999999999999999999999874
No 108
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.3e-35 Score=337.02 Aligned_cols=248 Identities=21% Similarity=0.293 Sum_probs=199.2
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
++||+|+||+||+|+++ +++.||+|+++..........+.+..|..+++.+ +||||+++++++.+....|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999976 6899999999876544444456678899999888 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-~~~~~~~ 155 (329)
T cd05588 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR-PGDTTST 155 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccccc-CCCcccc
Confidence 999998863 35789999999999999999999998 999999999999999999999999999875321 2223345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC----CCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQG----GDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....++..+.+.... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--- 223 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ---------IR--- 223 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC---------CC---
Confidence 67999999999999999999999999999999999999999643221 122223332222211 11
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCC------HHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPT------MREVV 1080 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl 1080 (1114)
.+......+.+++.+|++.||.+||+ +++++
T Consensus 224 -~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 224 -IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 11122346788999999999999998 56665
No 109
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.1e-35 Score=335.34 Aligned_cols=241 Identities=24% Similarity=0.304 Sum_probs=191.7
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhc-CCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGK-IRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
++||+|+||+||+|+.+ +++.||+|+++..........+.+..|..++.. .+||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 688999999986543322233445556666654 4899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~-~~~~~~ 155 (316)
T cd05592 81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG-EGKAST 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC-CCcccc
Confidence 9999998743 4689999999999999999999998 9999999999999999999999999999864322 233345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+......... ...+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~----~~~~~~i~~~~--------------~~~~~ 217 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE----DELFDSILNDR--------------PHFPR 217 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHcCC--------------CCCCC
Confidence 6799999999999999999999999999999999999999975432 22222211110 01111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMRE 1078 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~e 1078 (1114)
.....+.+++.+||+.||++||++.+
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChH
Confidence 12345778999999999999998753
No 110
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.4e-35 Score=328.25 Aligned_cols=256 Identities=30% Similarity=0.474 Sum_probs=206.5
Q ss_pred cCCcCCceecccCCeEEEEEEeCC------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRT------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
++|++.+.||+|+||.||+|.... ...||+|.+..... ......+.+|+..+++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE--PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC--HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 468888999999999999998652 25799999864432 3345678899999999999999999999999899
Q ss_pred eEEEEecCCCCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC
Q 001253 883 NLLMYEYMARGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD 947 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 947 (1114)
.+++|||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 999999999999999986431 4578899999999999999999998 9999999999999999
Q ss_pred CCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHH
Q 001253 948 KFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTW 1025 (1114)
Q Consensus 948 ~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~ 1025 (1114)
++.++|+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... +.
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~--- 235 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EV--- 235 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HH---
Confidence 99999999999986532221 22233457889999999988889999999999999999998 99998754321 11
Q ss_pred HHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1026 VRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
...+..... ...+......+.+++.+||+.||.+||+++||++.|+.+
T Consensus 236 -~~~i~~~~~------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 236 -IEMIRSRQL------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred -HHHHHcCCc------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 111221111 111223345789999999999999999999999999763
No 111
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.7e-36 Score=339.62 Aligned_cols=244 Identities=21% Similarity=0.248 Sum_probs=198.0
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARG 893 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 893 (1114)
+.||+|+||+||+|+.+ +|+.||+|++.............+..|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999975 78999999998654433334556778999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 894 SLGELLHGASSTLDWQTRFMIALGAAEGLSYLHH-DCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 894 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~-~~~~~~~ 155 (325)
T cd05594 81 ELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKT 155 (325)
T ss_pred cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCC-CCccccc
Confidence 99998874 3478999999999999999999997 6 899999999999999999999999999875321 2222344
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+..... ... .+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~----~~~~~~i~~~----------~~~----~p~ 217 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELILME----------EIR----FPR 217 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH----HHHHHHHhcC----------CCC----CCC
Confidence 5799999999999999999999999999999999999999964332 1222211111 001 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
.....+.+++.+||+.||++|+ +++++++
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 218 TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 1234678899999999999996 8998874
No 112
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8e-36 Score=344.44 Aligned_cols=254 Identities=27% Similarity=0.340 Sum_probs=202.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|+.+ +|+.||||++.............+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46889999999999999999976 68999999997653333334556788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..+.....
T Consensus 81 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 999999999999743 4689999999999999999999998 999999999999999999999999999875421110
Q ss_pred C-------------------------------------ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCC
Q 001253 968 K-------------------------------------SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGR 1010 (1114)
Q Consensus 968 ~-------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~ 1010 (1114)
. .....+||+.|+|||++.+..++.++||||+||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0 111346999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 001253 1011 APVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPT---MREVVL 1081 (1114)
Q Consensus 1011 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1081 (1114)
.||..... ....+...... ..+.. .........+.+++.+|+. +|.+|++ ++|+++
T Consensus 237 ~Pf~~~~~----~~~~~~i~~~~--------~~~~~--~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 237 PPFCSDNP----QETYRKIINWK--------ETLQF--PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCH----HHHHHHHHcCC--------CccCC--CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99975432 22222221110 00110 0111123467788999996 9999998 888766
No 113
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.1e-35 Score=333.85 Aligned_cols=262 Identities=25% Similarity=0.439 Sum_probs=208.1
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCc----EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGH----TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
..+|+..+.||+|+||+||+|++. +|+ .||+|++..... ....+++..|+.+++.++||||++++++|... .
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence 357999999999999999999964 333 489999864322 23356788999999999999999999998764 5
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
.++|+||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccc
Confidence 7899999999999999987667789999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 963 DMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 963 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
...... ......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+ +........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~----~~-~~~~~~~~~------ 228 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----SE-ISSILEKGE------ 228 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH----HH-HHHHHhCCC------
Confidence 432221 1122335678999999999999999999999999999997 9999864321 11 122222111
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCC
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGH 1092 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 1092 (1114)
... .+......+.+++.+||+.+|.+||++.+++..+.++.+...+
T Consensus 229 --~~~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~ 274 (316)
T cd05108 229 --RLP----QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 274 (316)
T ss_pred --CCC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCch
Confidence 000 1111234678999999999999999999999999988665443
No 114
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.8e-35 Score=325.03 Aligned_cols=250 Identities=24% Similarity=0.290 Sum_probs=197.9
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
||+|+||+||+++.+ +|+.||+|++...........+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999976 6899999999754333222344556799999999999999999999999999999999999999
Q ss_pred HHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccccc
Q 001253 896 GELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIA 974 (1114)
Q Consensus 896 ~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 974 (1114)
.+++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||++...... .......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeeccC
Confidence 9888643 33688999999999999999999998 9999999999999999999999999999865422 2223456
Q ss_pred ccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHH
Q 001253 975 GSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSH 1054 (1114)
Q Consensus 975 g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1114)
|++.|+|||++.+..++.++||||+||++|||++|+.||.............+..... ..... ....
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~ 222 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED----------EVKFE---HQNF 222 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc----------ccccc---cccC
Confidence 8999999999998889999999999999999999999997543322222222221111 00000 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1055 MITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1055 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
..++.+++.+||+.||++||+++|+++...
T Consensus 223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 223 TEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred CHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 345789999999999999999988764444
No 115
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.2e-35 Score=339.27 Aligned_cols=263 Identities=25% Similarity=0.363 Sum_probs=208.6
Q ss_pred HHHHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeE
Q 001253 804 LVVATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGF 876 (1114)
Q Consensus 804 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~ 876 (1114)
+.+..++|.+.++||+|+||.||+|+++ .++.||+|+++..... ...+.+..|+.++.++. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 4566678999999999999999999964 3468999999754332 22456888999999997 9999999999
Q ss_pred EEecCceEEEEecCCCCCHHHHhccCC-----------------------------------------------------
Q 001253 877 CYHQGSNLLMYEYMARGSLGELLHGAS----------------------------------------------------- 903 (1114)
Q Consensus 877 ~~~~~~~~lv~E~~~~gsL~~~l~~~~----------------------------------------------------- 903 (1114)
+...+..++||||+++|+|.++++...
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 999999999999999999999986421
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 001253 904 --------------------------------------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIK 939 (1114)
Q Consensus 904 --------------------------------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 939 (1114)
..+++.....++.|++.||+|||+. +++|||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlk 266 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLA 266 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCC
Confidence 1357778889999999999999988 99999999
Q ss_pred CCCeEECCCCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCC
Q 001253 940 SNNILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLD 1017 (1114)
Q Consensus 940 ~~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~ 1017 (1114)
|+||++++++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999986532211 12223457889999999998889999999999999999998 888986543
Q ss_pred CCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1018 QGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
..+ .....+..+.. ...+......+.+++.+||+.+|.+||+++|+++.|+++.
T Consensus 347 ~~~----~~~~~~~~~~~------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 347 MNE----QFYNAIKRGYR------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred chH----HHHHHHHcCCC------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 222 11121211110 0111122357889999999999999999999999999864
No 116
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-35 Score=340.09 Aligned_cols=204 Identities=28% Similarity=0.390 Sum_probs=177.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|+.+ +++.||+|++.............+..|+.++.+++||+|+++++++.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999976 68999999997654333334567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 99999999999974 35789999999999999999999998 999999999999999999999999999875431110
Q ss_pred ----------------------------------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCC
Q 001253 968 ----------------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPV 1013 (1114)
Q Consensus 968 ----------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~ 1013 (1114)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0112457999999999999999999999999999999999999999
Q ss_pred CCC
Q 001253 1014 QPL 1016 (1114)
Q Consensus 1014 ~~~ 1016 (1114)
...
T Consensus 237 ~~~ 239 (363)
T cd05628 237 CSE 239 (363)
T ss_pred CCC
Confidence 753
No 117
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.7e-35 Score=353.93 Aligned_cols=263 Identities=24% Similarity=0.314 Sum_probs=208.6
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|++. +|+.||+|++.......+...+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999976 68999999998665554555677899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeecc
Q 001253 888 EYMARGSLGELLHGA----------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFG 957 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 957 (1114)
||++||+|.++++.. ....++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998631 12456778899999999999999998 99999999999999999999999999
Q ss_pred CceecCCCCC-----------------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC
Q 001253 958 LAKVIDMPQS-----------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGG 1020 (1114)
Q Consensus 958 ~a~~~~~~~~-----------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~ 1020 (1114)
+++....... ......+||+.|||||++.+..++.++||||+||++|||++|+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521110 11123569999999999999999999999999999999999999997532211
Q ss_pred CHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhcc
Q 001253 1021 DLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRP-TMREVVLMLSESNRR 1089 (1114)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~ 1089 (1114)
.. ...... ++.. ..........+.+++.+|++.||++|| +++++++.|+.....
T Consensus 239 i~---~~~~i~---------~P~~---~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 239 IS---YRDVIL---------SPIE---VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hh---hhhhcc---------Chhh---ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 000000 0000 000112234578899999999999995 678888888887553
No 118
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.1e-35 Score=336.07 Aligned_cols=239 Identities=24% Similarity=0.319 Sum_probs=193.2
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
++||+|+||+||+|+.+ +++.||+|++...........+.+..|..++... +||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 6889999999765432233345567788888766 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~-~~~~~~~ 155 (320)
T cd05590 81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF-NGKTTST 155 (320)
T ss_pred chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc-CCCcccc
Confidence 9999998743 4689999999999999999999998 999999999999999999999999999875421 2223345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+..... .. ..+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~----~~~~~~i~~~-~~-------------~~~~ 217 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE----DDLFEAILND-EV-------------VYPT 217 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH----HHHHHHHhcC-CC-------------CCCC
Confidence 6799999999999999999999999999999999999999974332 2222222211 10 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
.....+.+++.+|++.||++||++
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 218 WLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCC
Confidence 123467899999999999999998
No 119
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.5e-35 Score=335.88 Aligned_cols=244 Identities=23% Similarity=0.295 Sum_probs=196.7
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCC-CceeeEEeEEEecCceEEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRH-RNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 887 (1114)
+|++.+.||+|+||+||+|+.+ +++.||+|++...........+.+..|..++..++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5788899999999999999976 678999999986543333335567789999999976 56889999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++..... ..
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~-~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF-GG 155 (324)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC-CC
Confidence 99999999999874 34688999999999999999999998 999999999999999999999999999875321 12
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... . .
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~----~~~~~~i~~~-~---------~--- 218 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE----DELFQSIMEH-N---------V--- 218 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHcC-C---------C---
Confidence 233456799999999999999999999999999999999999999975432 1222221111 0 0
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
..+......+.+++.+|++.||.+|++.
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 219 -SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1111223467889999999999999986
No 120
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-36 Score=318.45 Aligned_cols=249 Identities=24% Similarity=0.328 Sum_probs=216.2
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+-|...+.||+|.|++|-+|++- +|+.||||++.+.+.+.-. ...+.+|++.|+.++|||||++|++.......|+|.
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s-t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS-TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhh-hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 45788889999999999999965 8999999999887765433 445667999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE-CCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILL-DDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill-~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|.=++|+|+|++.++...+.+....+++.||+.|+.|+|+. .+||||+||+||.+ ..-|-|||+|||++-.+. +
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~--P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ--P 171 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC--C
Confidence 99999999999998889999999999999999999999998 89999999999875 567899999999998764 5
Q ss_pred CCccccccccccccCccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVT-EKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
.....+.+|+..|-|||++.+..|+ +++||||+|||+|-+++|+.||....+.+.+- .++|+.+
T Consensus 172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT--------------mImDCKY- 236 (864)
T KOG4717|consen 172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT--------------MIMDCKY- 236 (864)
T ss_pred cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh--------------hhhcccc-
Confidence 5667888999999999999999988 47899999999999999999998766544332 2334443
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+.....+..++|..|+..||.+|.+.+||+.
T Consensus 237 ---tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 ---TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ---cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 345556678899999999999999999999864
No 121
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.2e-34 Score=321.50 Aligned_cols=260 Identities=24% Similarity=0.386 Sum_probs=205.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCc----EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCce
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGH----TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 883 (1114)
++|++.+.||+|+||+||+|.+. +++ .+|+|.+.... ......++..|+..+++++||||+++++++. +...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCcc
Confidence 57888899999999999999975 444 47777764322 1223456778888999999999999999875 4567
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++++||+++|+|.+++......+++..+..++.|++.||+|+|+. +++||||||+||++++++.+||+|||.++...
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 899999999999999987677899999999999999999999998 99999999999999999999999999998653
Q ss_pred CCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 964 MPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 964 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
.... .......++..|+|||.+.+..++.++|||||||++||+++ |+.||..... ....+.+..+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~---- 231 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP-----HEVPDLLEKGERLA---- 231 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHCCCcCC----
Confidence 2221 22234457788999999998899999999999999999998 9999865432 11222222221110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCC
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQG 1091 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 1091 (1114)
.+......+.+++.+||..||++|||+.|+++.|..+.+..+
T Consensus 232 --------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~ 273 (279)
T cd05111 232 --------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPP 273 (279)
T ss_pred --------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCc
Confidence 000112356789999999999999999999999999876443
No 122
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=332.40 Aligned_cols=244 Identities=27% Similarity=0.436 Sum_probs=205.8
Q ss_pred eecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCC
Q 001253 816 VIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGS 894 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 894 (1114)
++|+|.||+||-|++. +...+|||.+....... .+-+.+|+...++++|.|||+++|.+..++.+-+.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~---~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSRE---VQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchh---hccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 7999999999999976 57789999986544322 4557889999999999999999999999999899999999999
Q ss_pred HHHHhccCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC-CCCCeEEeeccCceecCCCCCCccc
Q 001253 895 LGELLHGASSTL--DWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLD-DKFEAHVGDFGLAKVIDMPQSKSMS 971 (1114)
Q Consensus 895 L~~~l~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfG~a~~~~~~~~~~~~ 971 (1114)
|.++++..-+++ .+.+.-...+||++||.|||.. .|||||||-+||||+ -.|.+||+|||-++... .......
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-ginP~TE 734 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-GINPCTE 734 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhc-cCCcccc
Confidence 999998776777 6777888999999999999999 999999999999996 57899999999998764 2334557
Q ss_pred cccccccccCccccccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCc
Q 001253 972 AIAGSYGYIAPEYAYTM--KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDE 1049 (1114)
Q Consensus 972 ~~~g~~~y~aPE~~~~~--~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1114)
++.||..|||||++..+ .|+.++|||||||++.||.||++||....... ...++ -+-++..++
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--AAMFk-------------VGmyKvHP~ 799 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--AAMFK-------------VGMYKVHPP 799 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--Hhhhh-------------hcceecCCC
Confidence 78999999999999765 48889999999999999999999998655322 11111 122233456
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1050 KTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1050 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.+.+...+...+|.+|+.+||.+||+|++++.
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 77788889999999999999999999999975
No 123
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.4e-35 Score=332.21 Aligned_cols=202 Identities=27% Similarity=0.470 Sum_probs=176.4
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
..++|++.++||+|+||+||+|.++ ++..+|+|++..... ......+.+|+++++.++||||++++++|.+++..++
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 3478999999999999999999987 688899998875432 2335678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+++|+|.++++. ...+++.....++.+++.|++|||+.. +++||||||+||++++++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999999974 346889999999999999999999741 7999999999999999999999999998754321
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPL 1016 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~ 1016 (1114)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 223456899999999999888999999999999999999999999753
No 124
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.7e-35 Score=321.41 Aligned_cols=253 Identities=25% Similarity=0.425 Sum_probs=203.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.++|.+.++||+|++|.||+|.++.+..+|+|++..... ..+.+.+|+.++++++|||++++++++. .+..++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 356888999999999999999988777899998765432 2456888999999999999999999875 45689999
Q ss_pred ecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||+++++|.++++... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999999997533 3589999999999999999999998 99999999999999999999999999998754332
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
........++..|+|||...+..++.++||||+|+++|||++ |+.||...... ...........
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~----------- 221 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR----EVLEQVERGYR----------- 221 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcCCC-----------
Confidence 222223346778999999988889999999999999999999 88998753321 11111111100
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
...+......+.+++.+||+.||++||+++++++.|++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 --MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01111233568899999999999999999999999986
No 125
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.3e-35 Score=341.60 Aligned_cols=262 Identities=21% Similarity=0.257 Sum_probs=205.2
Q ss_pred HHHHHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec
Q 001253 802 KDLVVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ 880 (1114)
Q Consensus 802 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 880 (1114)
.++....++|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344556689999999999999999999976 6889999998754333333345678899999999999999999999999
Q ss_pred CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCce
Q 001253 881 GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 960 (1114)
+..|+||||+++|+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 999999999999999999974 3578888999999999999999998 99999999999999999999999999998
Q ss_pred ecCCCCCCccccccccccccCccccccCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcc
Q 001253 961 VIDMPQSKSMSAIAGSYGYIAPEYAYTMK----VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLV 1036 (1114)
Q Consensus 961 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1114)
..............||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ....+........
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~----~~~~~~i~~~~~~- 265 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----VGTYSKIMNHKNS- 265 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCc-
Confidence 76433333334567999999999987543 78899999999999999999999975332 2222222221110
Q ss_pred cccccccccCCCcccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 001253 1037 SGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFD--RPTMREVVLM 1082 (1114)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 1082 (1114)
.. ..........+.+++.+|++.++.+ ||++.|+++.
T Consensus 266 -------~~--~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 266 -------LT--FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred -------cc--CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 00 0111123346778999999844433 7888888774
No 126
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6e-35 Score=322.05 Aligned_cols=261 Identities=22% Similarity=0.320 Sum_probs=211.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||.||+|+.+ +++.||||.+...........+++..|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46788889999999999999964 78999999887654444444567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 888 EYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 888 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
||+++++|.++++. ....+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998863 234689999999999999999999998 999999999999999999999999999886542
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
.. .......|+..|+|||.+.+..++.++||||+|+++|+|++|..||..... +.....+.. .... .+
T Consensus 159 ~~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~-~~~~------~~-- 226 (267)
T cd08229 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKI-EQCD------YP-- 226 (267)
T ss_pred CC-cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc--hHHHHhhhh-hcCC------CC--
Confidence 22 222345688999999999988899999999999999999999999864322 112222211 1100 00
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
..........+.+++.+||+.||++|||+.+|++.++++.
T Consensus 227 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 227 ---PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0111123446889999999999999999999999999864
No 127
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.6e-35 Score=322.67 Aligned_cols=256 Identities=26% Similarity=0.448 Sum_probs=208.7
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
+..++|++.++||+|+||+||+|..++++.||||.+...... .+++.+|+..+++++|||++++++++..+...++
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEE
Confidence 345789999999999999999999888889999998754332 4568899999999999999999999998899999
Q ss_pred EEecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
||||+++++|.+++.... ..+++.++..++.+++.|++|||+. +++|+||||+||++++++.+|++|||.+.....
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 999999999999997543 4789999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
..........++..|+|||.+.+..++.++||||+|+++||+++ |+.||..... ............
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~----~~~~~~~~~~~~--------- 222 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN----REVLEQVERGYR--------- 222 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcCCC---------
Confidence 22222223345678999999998889999999999999999998 9999864332 112222111100
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
...+......+.+++.+|++.+|++||+++++++.|+.
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 ----MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00111113468899999999999999999999999875
No 128
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2e-35 Score=327.71 Aligned_cols=258 Identities=23% Similarity=0.409 Sum_probs=203.6
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH 879 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 879 (1114)
+.+++|++.+.||+|+||+||+|.++ +++.||+|++..... .....++.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 45678999999999999999999854 356799999864332 2234568899999999999999999999999
Q ss_pred cCceEEEEecCCCCCHHHHhccCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC
Q 001253 880 QGSNLLMYEYMARGSLGELLHGAS---------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE 950 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 950 (1114)
+...++||||+++|+|.++++... ..+++..+..++.|+++|++|||+. +++||||||+||++++++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCC
Confidence 999999999999999999986422 2457888999999999999999998 9999999999999999999
Q ss_pred eEEeeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHH
Q 001253 951 AHVGDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRN 1028 (1114)
Q Consensus 951 ~kl~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 1028 (1114)
++|+|||+++........ ......+++.|+|||++.+..++.++|||||||++|||++ |..||..... ....+
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~----~~~~~- 232 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN----EQVLR- 232 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHH-
Confidence 999999998754322211 1122345788999999998889999999999999999999 6888864332 12222
Q ss_pred HHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1029 FIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
.+...... ..+......+.+++.+||+.||++|||+.|+++.|++
T Consensus 233 ~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVMEGGLL------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHcCCcC------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11111110 0111123468899999999999999999999998864
No 129
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.4e-35 Score=335.69 Aligned_cols=244 Identities=22% Similarity=0.302 Sum_probs=196.3
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
++||+|+||+||+|+.+ +++.||+|++...........+.+..|.+++..+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999976 6789999999765433333345567788888765 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~-~~~~~~~ 155 (321)
T cd05591 81 GDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL-NGVTTTT 155 (321)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceeccc-CCccccc
Confidence 999998874 34688999999999999999999998 999999999999999999999999999976432 2222345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..|++.|+|||++.+..++.++||||+||++|||++|+.||..... ....+...... . ..+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~----~~~~~~i~~~~-~-------------~~p~ 217 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE----DDLFESILHDD-V-------------LYPV 217 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH----HHHHHHHHcCC-C-------------CCCC
Confidence 6799999999999998999999999999999999999999975432 22222222111 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-------CHHHHHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRP-------TMREVVL 1081 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RP-------s~~evl~ 1081 (1114)
.....+.+++.+|++.||++|| ++.++++
T Consensus 218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 1234678899999999999999 7777763
No 130
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.9e-35 Score=334.93 Aligned_cols=244 Identities=23% Similarity=0.298 Sum_probs=196.5
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+|++.+.||+|+||+||+|+.+ +++.||+|++.+.........+.+..|..++... +|++|+++++++.+.+..|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5788899999999999999976 6789999999865433333344566677777777 5899999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.... ..
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~-~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW-DG 155 (323)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC-CC
Confidence 999999999998743 4688999999999999999999998 999999999999999999999999999975432 12
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+..... . .
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~----~~~~~~i~~~-~---------~--- 218 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELFQSIMEH-N---------V--- 218 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH----HHHHHHHHhC-C---------C---
Confidence 223456799999999999999999999999999999999999999975332 1122221111 1 0
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
..+......+.+++.+|++.||++|++.
T Consensus 219 -~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 -AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1111223467899999999999999985
No 131
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.6e-35 Score=325.09 Aligned_cols=264 Identities=25% Similarity=0.424 Sum_probs=209.8
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCc----EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGH----TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
.++|+..++||+|+||+||+|++. +|+ +||+|++..... ....+.+..|+..++.++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS--PKANKEILDEAYVMAGVGSPYVCRLLGICLT-ST 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC--HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CC
Confidence 467899999999999999999864 444 589999865432 3335678889999999999999999999875 45
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
.+++|||+++|+|.++++.....+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeec
Confidence 7899999999999999986666899999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 963 DMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 963 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
...... ......+++.|+|||...+..++.++|||||||++|||++ |..||..... ..... .+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~----~~~~~~~----- 229 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-REIPD----LLEKGER----- 229 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHH----HHHCCCc-----
Confidence 432221 1122235678999999998899999999999999999998 8898864332 11111 2221110
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcc
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFE 1094 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 1094 (1114)
...+......+.+++.+||+.||++||++.|+++.++++.+..+++.
T Consensus 230 -------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~~~ 276 (279)
T cd05109 230 -------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSRFV 276 (279)
T ss_pred -------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcCeE
Confidence 00111223468899999999999999999999999999977765543
No 132
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.1e-34 Score=317.80 Aligned_cols=261 Identities=22% Similarity=0.324 Sum_probs=212.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||.||+|..+ +|+.||+|.++..........+.+.+|++++++++|++++++++++..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999987 89999999987544444444667889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 888 EYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 888 E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
||+++|+|.+++.. ....+++.++..++.+++.|++|||+. +++||||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999998863 234689999999999999999999998 999999999999999999999999999886542
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
.. .......+++.|+|||.+.+..++.++||||+||++|+|++|+.||.... ....+.... ...+.. .
T Consensus 159 ~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~-~~~~~~-----~--- 226 (267)
T cd08224 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK--MNLYSLCKK-IEKCDY-----P--- 226 (267)
T ss_pred CC-cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC--ccHHHHHhh-hhcCCC-----C---
Confidence 22 22234568889999999998889999999999999999999999986432 222222221 111100 0
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
..........+.+++.+||+.+|++|||+.++++++++++
T Consensus 227 ---~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 227 ---PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ---CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0011133446889999999999999999999999999875
No 133
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3e-35 Score=328.09 Aligned_cols=260 Identities=26% Similarity=0.439 Sum_probs=207.9
Q ss_pred hcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 881 (1114)
.++|.+.+.||+|+||+||++... ++..+|+|.+.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 467899999999999999999852 34568999886432 233567889999999999999999999999999
Q ss_pred ceEEEEecCCCCCHHHHhccCC------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 001253 882 SNLLMYEYMARGSLGELLHGAS------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF 949 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 949 (1114)
..++||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 9999999999999999986332 2589999999999999999999998 999999999999999999
Q ss_pred CeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHH
Q 001253 950 EAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVR 1027 (1114)
Q Consensus 950 ~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~ 1027 (1114)
.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||..... .....
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~----~~~~~ 233 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN----NEVIE 233 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH
Confidence 999999999986532221 11223345778999999998889999999999999999998 8888864432 11111
Q ss_pred HHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccC
Q 001253 1028 NFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQ 1090 (1114)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1090 (1114)
. +..+... . .+......+.+++.+||+.||.+|||+.|+.+.|+++.+..
T Consensus 234 ~-i~~~~~~--------~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 234 C-ITQGRVL--------Q----RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred H-HHcCCcC--------C----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 1 2221110 0 00112246889999999999999999999999999997653
No 134
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.4e-35 Score=343.59 Aligned_cols=255 Identities=23% Similarity=0.291 Sum_probs=200.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|+.+ +++.||||++...........+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46889999999999999999975 78999999987654333344567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 99999999999974 35688999999999999999999998 999999999999999999999999999864321000
Q ss_pred ------------C----------------------------------ccccccccccccCccccccCCCCcccchHHHHH
Q 001253 968 ------------K----------------------------------SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGV 1001 (1114)
Q Consensus 968 ------------~----------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGv 1001 (1114)
. .....+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 001246999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCC---CCHHH
Q 001253 1002 VLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDR---PTMRE 1078 (1114)
Q Consensus 1002 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~e 1078 (1114)
++|||++|+.||..... ....+...... ..+.. +........+.+++.+|+. +|.+| +++.|
T Consensus 237 il~elltG~~Pf~~~~~----~~~~~~i~~~~--------~~~~~--p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~ 301 (377)
T cd05629 237 IMFECLIGWPPFCSENS----HETYRKIINWR--------ETLYF--PDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHE 301 (377)
T ss_pred hhhhhhcCCCCCCCCCH----HHHHHHHHccC--------CccCC--CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence 99999999999965332 11122211100 00110 0111123467789999997 66665 69998
Q ss_pred HHHH
Q 001253 1079 VVLM 1082 (1114)
Q Consensus 1079 vl~~ 1082 (1114)
+++.
T Consensus 302 ~l~h 305 (377)
T cd05629 302 IKSH 305 (377)
T ss_pred HhcC
Confidence 8764
No 135
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.5e-35 Score=335.90 Aligned_cols=266 Identities=25% Similarity=0.340 Sum_probs=196.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----ce
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG-----SN 883 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 883 (1114)
+|++.++||+|+||.||+|+.+ +|+.||||++....... .....+.+|+.+++.++||||+++++++.... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-hhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5788899999999999999976 78999999987543222 22346788999999999999999999886432 47
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|+||||++ ++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 80 ~lv~e~~~-~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 80 YVVFELME-SDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEecCC-CCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 99999996 589998874 34689999999999999999999999 99999999999999999999999999998543
Q ss_pred CCCC--CccccccccccccCcccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc-------
Q 001253 964 MPQS--KSMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN------- 1032 (1114)
Q Consensus 964 ~~~~--~~~~~~~g~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~------- 1032 (1114)
.... .......|++.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....+......
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH-QLDLITDLLGTPSPETIS 233 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCCHHHHH
Confidence 2211 12234579999999999865 678999999999999999999999996543211 11111110000
Q ss_pred ----C---CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1033 ----N---SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1033 ----~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
. .+...+..................+.+++.+||+.||++|||++|+++.
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 0000000000000000001122457899999999999999999999853
No 136
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.1e-35 Score=334.45 Aligned_cols=244 Identities=25% Similarity=0.310 Sum_probs=196.5
Q ss_pred ceecccCCeEEEEEEeC----CCcEEEEEEecccCC-CChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 815 FVIGRGACGTVYRAVLR----TGHTVAVKKLASNRE-GNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
++||+|+||+||+++.. +++.||+|++..... ........+..|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999853 578999999975432 1122245577899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS 969 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 969 (1114)
+++|+|.+++.. ...+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 82 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 156 (323)
T cd05584 82 LSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE-GTV 156 (323)
T ss_pred CCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-CCc
Confidence 999999999974 34678888899999999999999998 9999999999999999999999999998754322 222
Q ss_pred cccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCc
Q 001253 970 MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDE 1049 (1114)
Q Consensus 970 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1114)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||..... .......... ...
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~----~~~~~~~~~~----------~~~---- 218 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR----KKTIDKILKG----------KLN---- 218 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH----HHHHHHHHcC----------CCC----
Confidence 3345799999999999988899999999999999999999999975332 2222222211 111
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1050 KTVSHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1050 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
.+......+.+++.+||+.||++|| ++.++++
T Consensus 219 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 219 LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1111234678999999999999999 7888765
No 137
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.2e-35 Score=320.29 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=198.7
Q ss_pred eecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCC
Q 001253 816 VIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGS 894 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 894 (1114)
.||+|+||+||+|+++ +++.||+|.+.... ..+....+.+|+++++.++||||+++++++......++||||+++++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 6999999999999975 78999999876433 23345678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcc-ccc
Q 001253 895 LGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSM-SAI 973 (1114)
Q Consensus 895 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~ 973 (1114)
|.+++......+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+........... ...
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 9999976666789999999999999999999998 999999999999999999999999999876432111111 111
Q ss_pred cccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 974 AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 974 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..+..|+|||.+.+..++.++||||+|+++|||++ |..||..... ........... . ...+.
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~~~~~~~~~~--------~----~~~~~ 219 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQTREAIEQGV--------R----LPCPE 219 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCC--------C----CCCcc
Confidence 23567999999998889999999999999999998 8888864322 11111111110 0 01111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
.....+.+++.+|++.+|++|||+.|++++|++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 223468899999999999999999999999863
No 138
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.8e-35 Score=343.29 Aligned_cols=253 Identities=23% Similarity=0.258 Sum_probs=197.6
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.|+..++||+|+||+||+|+.+ +++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999975 688999999976543333445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC--
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ-- 966 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~-- 966 (1114)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 99999999999743 4688899999999999999999998 99999999999999999999999999975321000
Q ss_pred --------------------------------------------CCccccccccccccCccccccCCCCcccchHHHHHH
Q 001253 967 --------------------------------------------SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVV 1002 (1114)
Q Consensus 967 --------------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvi 1002 (1114)
.......+||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 001123579999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCC---HHHH
Q 001253 1003 LLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPT---MREV 1079 (1114)
Q Consensus 1003 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ev 1079 (1114)
+|||++|+.||...... ......... ..... .+........+.+++.+++ .+|++|++ +.|+
T Consensus 238 l~elltG~~Pf~~~~~~----~~~~~i~~~--------~~~~~--~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei 302 (382)
T cd05625 238 LYEMLVGQPPFLAQTPL----ETQMKVINW--------QTSLH--IPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI 302 (382)
T ss_pred HHHHHhCCCCCCCCCHH----HHHHHHHcc--------CCCcC--CCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence 99999999999754321 111111110 00011 0111112345667777765 49999987 7776
Q ss_pred HH
Q 001253 1080 VL 1081 (1114)
Q Consensus 1080 l~ 1081 (1114)
++
T Consensus 303 ~~ 304 (382)
T cd05625 303 KA 304 (382)
T ss_pred hc
Confidence 64
No 139
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.2e-35 Score=334.04 Aligned_cols=258 Identities=23% Similarity=0.265 Sum_probs=201.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||+||+|+.+ +++.||+|++.+.........+.+.+|+.++..++|+||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999976 68999999997543333333566888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.+....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 99999999999986566789999999999999999999998 999999999999999999999999999976543332
Q ss_pred CccccccccccccCcccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.......||+.|+|||++.. ..++.++||||+||++|||++|+.||.... ..+...........
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~----~~~~~~~i~~~~~~------- 226 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES----LVETYGKIMNHKEH------- 226 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC----HHHHHHHHHcCCCc-------
Confidence 22333569999999999863 457889999999999999999999996432 22222222211110
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCC--CCCCHHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPF--DRPTMREVVLM 1082 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~ 1082 (1114)
... ..........+.+++.+|+..+++ .||++.++++.
T Consensus 227 -~~~-~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 227 -FQF-PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -ccC-CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000 011111234567788887755433 37899888765
No 140
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.2e-35 Score=326.73 Aligned_cols=265 Identities=20% Similarity=0.327 Sum_probs=196.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC--CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC---CCCceeeEEeEEEe----
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR--TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI---RHRNIVKLYGFCYH---- 879 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~---- 879 (1114)
++|++.+.||+|+||+||+|+.. +++.||+|++........ ....+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC-chHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 36889999999999999999973 468899999875543222 223455676666655 69999999999853
Q ss_pred -cCceEEEEecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeecc
Q 001253 880 -QGSNLLMYEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFG 957 (1114)
Q Consensus 880 -~~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 957 (1114)
....++||||++ ++|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 346799999997 4899988643 34689999999999999999999998 99999999999999999999999999
Q ss_pred CceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC---C
Q 001253 958 LAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN---S 1034 (1114)
Q Consensus 958 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~ 1034 (1114)
+++..... .......|++.|+|||++.+..++.++||||+||++|||++|++||......+.....+ +..... .
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~-~~~~~~~~~~ 232 (290)
T cd07862 156 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL-DVIGLPGEED 232 (290)
T ss_pred ceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHH-HHhCCCChhh
Confidence 99875422 23345578999999999998899999999999999999999999997654322222211 111100 0
Q ss_pred cccc--cccccccCCCccc-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1035 LVSG--MLDARLNLQDEKT-----VSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1035 ~~~~--~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+... .....+......+ ......+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000 0000000001111 112345678999999999999999999884
No 141
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-36 Score=332.16 Aligned_cols=263 Identities=24% Similarity=0.378 Sum_probs=211.1
Q ss_pred hcCCcCCceecccCCeEEEEEEeC--CC--cEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCce
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR--TG--HTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~--~g--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 883 (1114)
.++....++||+|.||+||+|.|+ .| ..||||.++...... ...+|.+|+.+|.+++|||++++||+..+ ...
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 345566678999999999999987 34 369999998776543 47889999999999999999999999987 778
Q ss_pred EEEEecCCCCCHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 884 LLMYEYMARGSLGELLHG-ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
.+|||.++.|+|.+.+++ ....+-......++.|||.||.||.++ ++||||+.++|+++-....|||+|||+.+.+
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceecc
Confidence 899999999999999987 455788888899999999999999999 9999999999999999999999999999977
Q ss_pred CCCCCCc-c-ccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 963 DMPQSKS-M-SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 963 ~~~~~~~-~-~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
+...... + ....-+..|+|||.+....++.++|||+|||++|||+| |..||.+... .+.++. +..
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g----~qIL~~-iD~------- 330 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG----IQILKN-IDA------- 330 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH----HHHHHh-ccc-------
Confidence 5332221 1 12234568999999999999999999999999999999 7899976543 222222 111
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH--HhhhccCCCc
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLML--SESNRRQGHF 1093 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L--~~i~~~~~~~ 1093 (1114)
. .+-+.+..+...++++++.||..+|++||||..+.+.+ .+........
T Consensus 331 ---~--erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaqp~~a~~ 381 (1039)
T KOG0199|consen 331 ---G--ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPAVARE 381 (1039)
T ss_pred ---c--ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCCceeee
Confidence 1 11233445667899999999999999999999998544 4443333333
No 142
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.2e-35 Score=348.36 Aligned_cols=250 Identities=23% Similarity=0.276 Sum_probs=202.2
Q ss_pred cCCcCCceecccCCeEEEEEEeC-C-CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-T-GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
..|.+.+.||+|+||.||+|... + ++.||+|.+.... ......++.|+.+++.++|||||++++++..++..|+|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND---ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 34889999999999999999865 3 6788888764332 23345678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 887 YEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|||+++|+|.++++. ....+++.++..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 999999999998853 234688999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 964 MPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 964 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ........... .. .
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~----~~~~~~~~~~~-~~-----~- 289 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS----QREIMQQVLYG-KY-----D- 289 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhC-CC-----C-
Confidence 3222 22345679999999999999999999999999999999999999996432 22222222111 10 0
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+......+.+++.+||+.||++||++++++.
T Consensus 290 ------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 ------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 011122346889999999999999999999864
No 143
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.8e-35 Score=326.42 Aligned_cols=269 Identities=24% Similarity=0.388 Sum_probs=209.4
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH 879 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 879 (1114)
+..++|++.++||+|+||.||+|..+ .+..||+|.+..... ......+.+|+.++++++||||+++++++.+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 45688999999999999999999754 245899998764432 2224457889999999999999999999999
Q ss_pred cCceEEEEecCCCCCHHHHhccCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC
Q 001253 880 QGSNLLMYEYMARGSLGELLHGAS---------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE 950 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 950 (1114)
.+..++||||+++|+|.++++... ...++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~ 157 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFT 157 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCc
Confidence 999999999999999999996421 2456778899999999999999998 9999999999999999999
Q ss_pred eEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHH
Q 001253 951 AHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRN 1028 (1114)
Q Consensus 951 ~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 1028 (1114)
++++|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+..+
T Consensus 158 ~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~----~~~~~- 232 (288)
T cd05061 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN----EQVLK- 232 (288)
T ss_pred EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH-
Confidence 99999999985432221 11222345778999999998889999999999999999998 7888864332 12222
Q ss_pred HHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCC
Q 001253 1029 FIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDH 1100 (1114)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~ 1100 (1114)
.+..+... ..+......+.+++.+|++.||++|||+.++++.+++... ..+.++||
T Consensus 233 ~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~----~~~~~~~~ 288 (288)
T cd05061 233 FVMDGGYL------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH----PSFPEVSF 288 (288)
T ss_pred HHHcCCCC------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC----CCCCCCCC
Confidence 22111110 0011123468899999999999999999999999988642 35555554
No 144
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.3e-35 Score=343.93 Aligned_cols=255 Identities=23% Similarity=0.260 Sum_probs=198.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.+|++.++||+|+||+||+|+.+ +++.||||++...........+.+.+|+.++++++||||+++++.+.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36899999999999999999975 68999999987543322233566888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC-
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ- 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~- 966 (1114)
||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 81 DYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 999999999999743 4688888999999999999999998 99999999999999999999999999975321000
Q ss_pred -----------------------------------------CCccccccccccccCccccccCCCCcccchHHHHHHHHH
Q 001253 967 -----------------------------------------SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLE 1005 (1114)
Q Consensus 967 -----------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~e 1005 (1114)
.......+||+.|||||++.+..++.++||||+||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 001123579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCC---CHHHHHHH
Q 001253 1006 LLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRP---TMREVVLM 1082 (1114)
Q Consensus 1006 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~ 1082 (1114)
|++|+.||...... .......... .... ..........+.+++.+|+ .+|.+|+ ++.|+++.
T Consensus 237 ll~G~~Pf~~~~~~----~~~~~i~~~~--------~~~~--~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 237 MLVGQPPFLADTPA----ETQLKVINWE--------TTLH--IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhhCCCCCCCCCHH----HHHHHHhccC--------cccc--CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999754321 1111111100 0000 0011112335667777766 4999999 88888754
No 145
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.5e-35 Score=333.00 Aligned_cols=244 Identities=23% Similarity=0.289 Sum_probs=196.9
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+||+||+|+++ +++.||+|++++...........+..|..+++.+ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 6789999999865433333345667788888877 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.... .......
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-~~~~~~~ 155 (318)
T cd05570 81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL-GGVTTST 155 (318)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCc-CCCcccc
Confidence 9999998743 4789999999999999999999998 999999999999999999999999999875321 2222334
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
.+|++.|+|||++.+..++.++||||+||++|||++|+.||.... ........... .. ..+.
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~----~~~~~~~i~~~-~~-------------~~~~ 217 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD----EDELFQSILED-EV-------------RYPR 217 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC----HHHHHHHHHcC-CC-------------CCCC
Confidence 579999999999999999999999999999999999999996433 12222221111 10 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTM-----REVVL 1081 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 1081 (1114)
.....+.+++.+||+.||.+||++ .++++
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 223467899999999999999999 77764
No 146
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.1e-35 Score=334.95 Aligned_cols=244 Identities=21% Similarity=0.271 Sum_probs=196.0
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+||+||+|+.+ +++.||+|++...........+.+..|+.++.++ +||+|+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 6789999999876544444456688899998888 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~-~~~~~~~ 155 (327)
T cd05617 81 GDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG-PGDTTST 155 (327)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccC-CCCceec
Confidence 999998863 34689999999999999999999998 999999999999999999999999999875321 2223345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC--CHHHHHHHHHhcCCcccccccccccCCCcc
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGG--DLVTWVRNFIRNNSLVSGMLDARLNLQDEK 1050 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1114)
.+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....++........ .. .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------~~----~ 222 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP---------IR----I 222 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC---------CC----C
Confidence 679999999999999999999999999999999999999996433221 12222222222111 11 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1051 TVSHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1051 ~~~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
+......+.+++.+|++.||.+|+++
T Consensus 223 p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 PRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 11122457789999999999999985
No 147
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=8.9e-35 Score=323.53 Aligned_cols=266 Identities=27% Similarity=0.362 Sum_probs=201.7
Q ss_pred CcCCceecccCCeEEEEEEe-----CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--Cce
Q 001253 811 FDERFVIGRGACGTVYRAVL-----RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSN 883 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 883 (1114)
|+..+.||+|+||+||++.. .+++.||+|+++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 48889999999999988763 2578899999875432 12356688899999999999999999988754 357
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||+++...
T Consensus 84 ~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 899999999999999974 3589999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCC--ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC--Cccccc
Q 001253 964 MPQSK--SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN--SLVSGM 1039 (1114)
Q Consensus 964 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 1039 (1114)
..... ......++..|+|||...+..++.++||||||+++|||++|..||...... ............ ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhhh
Confidence 32211 112234567799999998888999999999999999999999998643321 111100000000 000000
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
.+.... ...+......+.+++.+||+++|++|||++++++.|++++
T Consensus 237 ~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMR--LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCC--CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 000000 1112223457899999999999999999999999999875
No 148
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.3e-35 Score=317.54 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=200.7
Q ss_pred eecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 816 VIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
+||+|+||.||+|..++++.||+|++..... ......+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP--QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 6899999999999988889999999875432 23345688899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccc
Q 001253 896 GELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAG 975 (1114)
Q Consensus 896 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g 975 (1114)
.+++......+++..+..++.+++.|+.|+|+. +++||||||+||++++++.+|++|||++...............+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 999976666789999999999999999999998 99999999999999999999999999997643222222222345
Q ss_pred cccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHH
Q 001253 976 SYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSH 1054 (1114)
Q Consensus 976 ~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1114)
+..|+|||++.+..++.++||||||+++||+++ |..||..... .. ....+..... ...+...
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~----~~-~~~~~~~~~~------------~~~~~~~ 219 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN----QQ-AREQVEKGYR------------MSCPQKC 219 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH----HH-HHHHHHcCCC------------CCCCCCC
Confidence 678999999998889999999999999999998 9999864432 11 1111111110 0111122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1055 MITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1055 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
...+.+++.+|++.+|++||++.|++++|.
T Consensus 220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 220 PDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 346889999999999999999999999875
No 149
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.2e-35 Score=325.03 Aligned_cols=256 Identities=27% Similarity=0.453 Sum_probs=205.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 881 (1114)
.++|.+.+.||+|+||.||+|+.. +++.||+|+++.... .+..+.+.+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 356888899999999999999864 347899999875433 223567899999999999999999999999999
Q ss_pred ceEEEEecCCCCCHHHHhccCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC
Q 001253 882 SNLLMYEYMARGSLGELLHGAS-------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK 948 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 948 (1114)
..++||||+++++|.++++... ..+++.++..++.|++.|++|+|+. +++||||||+||+++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCC
Confidence 9999999999999999996432 3578899999999999999999998 99999999999999999
Q ss_pred CCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHH
Q 001253 949 FEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWV 1026 (1114)
Q Consensus 949 ~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~ 1026 (1114)
+.+||+|||.++....... .......+++.|+|||++.+..++.++||||+||++|||++ |..||...... ..+
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~----~~~ 234 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE----EVI 234 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHH
Confidence 9999999999986432221 11223346788999999999999999999999999999998 99998654321 111
Q ss_pred HHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1027 RNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
.. +..+.. . ..+......+.+++.+||+.||++||++.|+++.|++
T Consensus 235 ~~-~~~~~~---------~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 235 EC-ITQGRL---------L---QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HH-HHcCCc---------C---CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 11 111111 0 0111223468899999999999999999999999863
No 150
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.9e-35 Score=330.79 Aligned_cols=243 Identities=25% Similarity=0.338 Sum_probs=192.9
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhc-CCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGK-IRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+||+||+|+++ +++.||||+++..........+.+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999976 578999999976532222223445667777765 4899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~~~~ 155 (316)
T cd05619 81 GDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENML-GDAKTCT 155 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCC-CCCceee
Confidence 999999974 34688999999999999999999998 999999999999999999999999999875321 1222345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+. +.... .. .+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~----~~~~~~-i~~~~-------~~------~~~ 217 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE----EELFQS-IRMDN-------PC------YPR 217 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH----HHHHHH-HHhCC-------CC------CCc
Confidence 5799999999999998999999999999999999999999975332 122222 11110 00 011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMR-EVV 1080 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~-evl 1080 (1114)
.....+.+++.+||+.||++||++. ++.
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1223578899999999999999997 554
No 151
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.7e-35 Score=335.41 Aligned_cols=240 Identities=26% Similarity=0.292 Sum_probs=191.5
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHH-HHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEIL-TLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+||+||+|+.+ +|+.||+|++...........+.+..|.. +++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999976 78999999997653322222334444444 56889999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~~ 155 (323)
T cd05575 81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE-HSKTTST 155 (323)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccccc-CCCcccc
Confidence 999999874 45788999999999999999999998 999999999999999999999999999875321 2223345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..+..... .... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~----~~~~~~~i~~~----------~~~~----~~ 217 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD----TAEMYDNILNK----------PLRL----KP 217 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC----HHHHHHHHHcC----------CCCC----CC
Confidence 679999999999999999999999999999999999999997432 22222222211 1111 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMR 1077 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~ 1077 (1114)
.....+.+++.+|++.||.+||+++
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1234678999999999999999985
No 152
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2e-35 Score=335.20 Aligned_cols=246 Identities=23% Similarity=0.256 Sum_probs=193.0
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHH-HHHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEI-LTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+||+||+|+++ +++.||+|++.............+..|. .+++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999976 6788999999754322222233344444 456788999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+.+.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 ~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~-~~~~~~~ 155 (325)
T cd05602 81 GELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-HNGTTST 155 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccccc-CCCCccc
Confidence 999999974 34677888889999999999999998 999999999999999999999999999975422 2223345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+..+...... .. ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~----------~~----~~~ 217 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT----AEMYDNILNKP----------LQ----LKP 217 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH----HHHHHHHHhCC----------cC----CCC
Confidence 6799999999999999999999999999999999999999974332 22222222110 11 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
.....+.+++.+|++.||.+||++.+.+.++
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i 248 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 248 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence 2234678899999999999999987654443
No 153
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.4e-35 Score=325.97 Aligned_cols=258 Identities=25% Similarity=0.428 Sum_probs=206.9
Q ss_pred cCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
++|.+.+.||+|+||.||+|... ++..+|+|.+..... ...+.+.+|+..+++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH---HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 56888899999999999999853 345688888754332 234678899999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC
Q 001253 883 NLLMYEYMARGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD 947 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 947 (1114)
.++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 999999999999999986432 3478999999999999999999998 9999999999999999
Q ss_pred CCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHH
Q 001253 948 KFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTW 1025 (1114)
Q Consensus 948 ~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~ 1025 (1114)
++.++|+|||++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... ..
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~ 234 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT----EV 234 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HH
Confidence 99999999999976532221 11223456788999999999999999999999999999999 99998654321 11
Q ss_pred HHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1026 VRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
+.. ...+.... .+......+.+++.+||+.||++||++.+|+++|+++.+.
T Consensus 235 ~~~-~~~~~~~~------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 235 IEC-ITQGRVLE------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHH-HhCCCCCC------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 111 11111110 0111234688999999999999999999999999999664
No 154
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.8e-35 Score=328.69 Aligned_cols=265 Identities=19% Similarity=0.333 Sum_probs=202.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|+.+ +++.||+|++....... ....+.+|+.++++++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC--cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 56889999999999999999976 68899999987554322 2345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++ ++.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 158 (309)
T cd07872 84 EYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT- 158 (309)
T ss_pred eCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence 99986 89888876666789999999999999999999998 99999999999999999999999999998653222
Q ss_pred CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC------c--ccc
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS------L--VSG 1038 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------~--~~~ 1038 (1114)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+......+ ...... . ...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR-LLGTPTEETWPGISSNDE 237 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-HhCCCCHHHHhhhcchhh
Confidence 22234568899999998865 4588999999999999999999999975443222111111 110000 0 000
Q ss_pred cccccccCCC-----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1039 MLDARLNLQD-----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1039 ~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+....... .........+.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000000 001112346789999999999999999999986
No 155
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.7e-34 Score=321.28 Aligned_cols=252 Identities=24% Similarity=0.298 Sum_probs=201.4
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|+..+.||+|+||+||+|++. +++.||+|++.............+.+|+.+++.++|++++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999975 7899999998765443333345577899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 890 MARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 890 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++..... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~--~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPE--GE 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCC--CC
Confidence 9999999988643 34699999999999999999999998 999999999999999999999999999976432 12
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
......|+..|+|||++.+..++.++|+||+||++|||++|+.||........... +...+.....
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~-~~~~~~~~~~------------- 222 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE-VDRRVLETEE------------- 222 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhhhcccc-------------
Confidence 22345789999999999988999999999999999999999999975433211111 1111111100
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPT-----MREVVL 1081 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1081 (1114)
.........+.+++.+|++.||++||+ +.++++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 011122335788999999999999999 556655
No 156
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=9.8e-35 Score=320.51 Aligned_cols=257 Identities=25% Similarity=0.450 Sum_probs=206.7
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CC---cEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCce
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TG---HTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 883 (1114)
.++|+..+.||+|+||.||+|+.+ ++ ..+|+|.+..... ....+.+..|+.++++++|||++++.+++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT--EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC--HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 457888899999999999999975 33 3799998865432 23356788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++++|.+++......+++.++..++.|++.|++|+|+. +++||||||+||++++++.+|++|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999999999986667889999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCCcc--ccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 964 MPQSKSM--SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 964 ~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
....... .....+..|+|||++.+..++.++|||||||++||+++ |+.||..... ....+.. ....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~----~~~~~~i-~~~~------ 227 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN----HEVMKAI-NDGF------ 227 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH----HHHHHHH-hcCC------
Confidence 3222111 11223567999999988889999999999999999997 9999965432 1222221 1110
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
. .+........+.+++.+||+.+|++||++.+|++.|+++
T Consensus 228 --~----~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 --R----LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --C----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 011112234688999999999999999999999999886
No 157
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.5e-35 Score=330.50 Aligned_cols=243 Identities=25% Similarity=0.317 Sum_probs=192.9
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhc-CCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGK-IRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
++||+|+||.||+|+++ +|+.||+|+++..........+.+..|..++.. .+||+|+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999986 689999999976533222224455667777765 4899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~~~~ 155 (316)
T cd05620 81 GDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF-GDNRAST 155 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeeccc-CCCceec
Confidence 999999874 34688999999999999999999998 999999999999999999999999999875321 1223345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..|++.|+|||++.+..++.++||||+||++|||++|+.||..... ....+. +.... . ..+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~----~~~~~~-~~~~~-------~------~~~~ 217 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE----DELFES-IRVDT-------P------HYPR 217 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----HHHHHH-HHhCC-------C------CCCC
Confidence 6799999999999999999999999999999999999999964332 122221 11110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMR-EVV 1080 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~-evl 1080 (1114)
....++.+++.+||+.||++||++. +++
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1234678899999999999999985 554
No 158
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.8e-35 Score=326.87 Aligned_cols=261 Identities=26% Similarity=0.411 Sum_probs=207.9
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEE
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFC 877 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 877 (1114)
.+..++|+..+.||+|+||.||+|.++ ....+|+|++..... ......+.+|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 345678999999999999999999864 236799999875432 22345688899999999 899999999999
Q ss_pred EecCceEEEEecCCCCCHHHHhccC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 001253 878 YHQGSNLLMYEYMARGSLGELLHGA---------------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNN 942 (1114)
Q Consensus 878 ~~~~~~~lv~E~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 942 (1114)
..++..++||||+++|+|.++++.. ...+++..+..++.|++.|++|||+. +|+||||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccceee
Confidence 9999999999999999999998632 34689999999999999999999998 99999999999
Q ss_pred eEECCCCCeEEeeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCC
Q 001253 943 ILLDDKFEAHVGDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGG 1020 (1114)
Q Consensus 943 ill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~ 1020 (1114)
|++++++.+||+|||.++.+...... ......++..|+|||++.+..++.++|||||||++||+++ |..||.....
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-- 240 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-- 240 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH--
Confidence 99999999999999999865432211 1122345678999999998899999999999999999997 8899864332
Q ss_pred CHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1021 DLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
.+.. +....... ...+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 241 --~~~~-~~~~~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 --EELF-KLLKEGYR------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred --HHHH-HHHHcCCc------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111 11111110 0111222346889999999999999999999999999874
No 159
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.5e-34 Score=316.76 Aligned_cols=250 Identities=25% Similarity=0.388 Sum_probs=205.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..+.||+|++|.||+|+.+ +++.||+|.+...... ....+.+..|+.+++.++|||++++++++..++..++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 4777889999999999999976 6899999998754332 2345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+++++|.++++.. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~- 155 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT- 155 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc-
Confidence 99999999999754 45789999999999999999999998 99999999999999999999999999998764322
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......|++.|+|||+..+..++.++||||||+++|||++|+.||..... ....+.... +..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~-~~~------------ 218 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ----GALILKIIR-GVF------------ 218 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHc-CCC------------
Confidence 222345688999999999999999999999999999999999999964431 111221111 110
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+||+.+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 219 PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 0111123346889999999999999999999986
No 160
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.4e-34 Score=324.67 Aligned_cols=260 Identities=25% Similarity=0.409 Sum_probs=207.6
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCY 878 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 878 (1114)
...++|.+.+.||+|+||.||+|.+. ++..||+|+++.... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 34467999999999999999999742 355899999875433 22346788999999999 7999999999999
Q ss_pred ecCceEEEEecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeecc
Q 001253 879 HQGSNLLMYEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFG 957 (1114)
Q Consensus 879 ~~~~~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 957 (1114)
..+..++||||+++|+|.++++... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||
T Consensus 110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 9999999999999999999997533 3489999999999999999999998 99999999999999999999999999
Q ss_pred CceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCc
Q 001253 958 LAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSL 1035 (1114)
Q Consensus 958 ~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1114)
.++....... .......++..|+|||.+.+..++.++||||+||++|||++ |..||............ ......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~----~~~~~~ 262 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL----IKEGYR 262 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH----HHcCCc
Confidence 9986532221 11222346788999999999899999999999999999998 99998754432222111 111100
Q ss_pred ccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1036 VSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
...+......+.+++.+|++++|++|||+.|+++.|++.
T Consensus 263 ------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 ------------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 000111234688999999999999999999999999874
No 161
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.5e-35 Score=337.43 Aligned_cols=266 Identities=23% Similarity=0.289 Sum_probs=200.7
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----ce
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG-----SN 883 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 883 (1114)
+|+..++||+|+||+||+|+.. +|+.||+|++...... ....+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN-LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccc-hHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 4788899999999999999975 7899999998654322 223456788999999999999999999998776 78
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|+||||+.+ +|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 80 ~lv~e~~~~-~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 80 YVVTELMQS-DLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEEeecccc-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 999999975 88887763 45789999999999999999999998 99999999999999999999999999998754
Q ss_pred CCCCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcc------
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLV------ 1036 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 1036 (1114)
...........+++.|+|||++.+. .++.++||||+||++|||++|+.||........ ...+.+........
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ-LDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCHHHHHHhh
Confidence 3333334445688999999998774 478999999999999999999999975442211 11111111100000
Q ss_pred ----cccc-----cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1037 ----SGML-----DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1037 ----~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..+. .+...............+.+++.+|++.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000 000000000011123467899999999999999999999863
No 162
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.6e-35 Score=345.35 Aligned_cols=255 Identities=25% Similarity=0.295 Sum_probs=204.9
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC----
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG---- 881 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 881 (1114)
..++|++.++||+|+||+||+|+.. +|+.||||++...... ......+.+|+..+..++|+|++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3478999999999999999999965 7899999999765432 233556788999999999999999988775432
Q ss_pred ----ceEEEEecCCCCCHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEe
Q 001253 882 ----SNLLMYEYMARGSLGELLHGA---SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVG 954 (1114)
Q Consensus 882 ----~~~lv~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 954 (1114)
..++||||+++|+|.++++.. ...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 257999999999999998642 34689999999999999999999998 99999999999999999999999
Q ss_pred eccCceecCCCC-CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 955 DFGLAKVIDMPQ-SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 955 DfG~a~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
|||+++.+.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||... .....+......
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~----~~~~~~~~~~~~- 260 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE----NMEEVMHKTLAG- 260 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC----CHHHHHHHHhcC-
Confidence 999998654322 22234567999999999999999999999999999999999999999643 222333322211
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
.. ...+......+.+++.+||+.||.+||++.++++.
T Consensus 261 ~~------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 RY------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CC------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 10 01112233468899999999999999999998763
No 163
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-34 Score=333.41 Aligned_cols=264 Identities=26% Similarity=0.331 Sum_probs=199.0
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG----- 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 881 (1114)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++...... ......+.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 478999999999999999999975 6899999999755332 233456778999999999999999999986543
Q ss_pred -ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCce
Q 001253 882 -SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 882 -~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 960 (1114)
..|+||||+++ ++.+.++ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 46999999976 6666664 3478889999999999999999998 99999999999999999999999999997
Q ss_pred ecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH--------------
Q 001253 961 VIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWV-------------- 1026 (1114)
Q Consensus 961 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~-------------- 1026 (1114)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...+....+....
T Consensus 172 ~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 172 TACT--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred cccc--CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 6432 222344578999999999999999999999999999999999999997554221111111
Q ss_pred ----HHHHhcCCcccccc------cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1027 ----RNFIRNNSLVSGML------DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1027 ----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+.+........... +................+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111100000000 00000000011112346789999999999999999999987
No 164
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-34 Score=319.75 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=206.2
Q ss_pred cCCcCCceecccCCeEEEEEEeC-C---CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-T---GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
++|++.+.||+|+||.||+|+++ + +..+|+|.++.... ....+.+..|+.++++++||||+++++++..++..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 57888999999999999999864 2 34799999865432 233567889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+||||+++++|.+++......+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.....
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999999987666789999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCcc--ccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 965 PQSKSM--SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 965 ~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
...... ....++..|+|||.+.+..++.++||||||+++||+++ |..||...... +....+ ....
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-~~~~~~----~~~~------- 226 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-DVIKAI----EEGY------- 226 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-HHHHHH----hCCC-------
Confidence 322211 11233568999999998889999999999999999886 99998654321 111111 1110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
+ .+.+......+.+++.+|++.+|.+||++.++++.|+++
T Consensus 227 -~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 -R----LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -c----CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 011112234678999999999999999999999999875
No 165
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.1e-34 Score=316.91 Aligned_cols=254 Identities=25% Similarity=0.368 Sum_probs=203.9
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCC--hhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGN--NNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
++|++.+.||+|++|.||+|... +++.||+|++....... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999975 68999999987543322 1224568889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+++++|.+++... ..+++.....++.|++.|++|||+. +++||||+|+||++++++.++|+|||.++.....
T Consensus 82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 99999999999998743 4688899999999999999999998 9999999999999999999999999999865422
Q ss_pred CCCcc--ccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 966 QSKSM--SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 966 ~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||..... . ........... .
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~-~~~~~~~~~~~--------~ 225 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA---M-AAIFKIATQPT--------N 225 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch---H-HHHHHHhccCC--------C
Confidence 21111 334678899999999998899999999999999999999999864322 1 11111111100 0
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
...+......+.+++.+||+.+|.+|||+.|+++.
T Consensus 226 ----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 ----PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ----CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11112233467889999999999999999999863
No 166
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.8e-35 Score=326.52 Aligned_cols=261 Identities=26% Similarity=0.458 Sum_probs=204.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCc--EEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGH--TVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 884 (1114)
++|++.+.||+|+||+||+|+++ ++. .+|+|.+.... .....+.+.+|+.++.++ +||||+++++++..++..|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 57888999999999999999975 454 45777765332 223356788899999999 8999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 001253 885 LMYEYMARGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF 949 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 949 (1114)
+||||+++|+|.++++... ..+++.++..++.|++.|++|||+. +++||||||+||++++++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCC
Confidence 9999999999999996432 2578999999999999999999998 999999999999999999
Q ss_pred CeEEeeccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHH
Q 001253 950 EAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRN 1028 (1114)
Q Consensus 950 ~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 1028 (1114)
.+||+|||++..... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... .+..+.
T Consensus 162 ~~kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~ 235 (303)
T cd05088 162 VAKIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----AELYEK 235 (303)
T ss_pred cEEeCccccCcccch--hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh----HHHHHH
Confidence 999999999864221 111112234678999999988889999999999999999998 9999864332 111111
Q ss_pred HHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCc
Q 001253 1029 FIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHF 1093 (1114)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 1093 (1114)
..... . ...+......+.+++.+||+.+|++||++.++++.++++...+..+
T Consensus 236 -~~~~~--------~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~ 287 (303)
T cd05088 236 -LPQGY--------R----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 287 (303)
T ss_pred -HhcCC--------c----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhh
Confidence 11100 0 0011112346789999999999999999999999999885554433
No 167
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-34 Score=315.97 Aligned_cols=248 Identities=23% Similarity=0.376 Sum_probs=198.1
Q ss_pred eecccCCeEEEEEEeC---CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 816 VIGRGACGTVYRAVLR---TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
.||+|+||.||+|.++ ++..||+|++..... ....+.+.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE--KSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC--hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 4899999999999864 355799999865432 334567889999999999999999999885 4578999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc--c
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS--M 970 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~--~ 970 (1114)
++|.+++......+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......... .
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 999999986667899999999999999999999998 99999999999999999999999999998654322211 1
Q ss_pred ccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCc
Q 001253 971 SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDE 1049 (1114)
Q Consensus 971 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1114)
....++..|+|||.+.+..++.++|||||||++||+++ |..||...... ... ..+..+.. ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~-~~~~~~~~------------~~ 218 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP----EVM-SFIEQGKR------------LD 218 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH----HHH-HHHHCCCC------------CC
Confidence 12234578999999988889999999999999999996 99999754321 111 22222110 11
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1050 KTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1050 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.+.....++.+++.+||..+|++||++.+|.+.|+++
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1122345688999999999999999999999999875
No 168
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-34 Score=330.96 Aligned_cols=263 Identities=25% Similarity=0.393 Sum_probs=204.3
Q ss_pred HHhcCCcCCceecccCCeEEEEEEe------CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVL------RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCY 878 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 878 (1114)
...++|++.++||+|+||+||+|++ .+++.||||+++..... ...+.+.+|+.++.++ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh--HHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 3457899999999999999999974 25788999999754322 2345678899999999 6899999999886
Q ss_pred ec-CceEEEEecCCCCCHHHHhccCC------------------------------------------------------
Q 001253 879 HQ-GSNLLMYEYMARGSLGELLHGAS------------------------------------------------------ 903 (1114)
Q Consensus 879 ~~-~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------ 903 (1114)
.. ...++||||+++|+|.++++...
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 54 46789999999999999986321
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-Ccc
Q 001253 904 ------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS-KSM 970 (1114)
Q Consensus 904 ------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~ 970 (1114)
..+++.++..++.|+++|++|||+. +|+||||||+||++++++.+||+|||++........ ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 238 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK 238 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhc
Confidence 2367888899999999999999998 999999999999999999999999999986532221 112
Q ss_pred ccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCc
Q 001253 971 SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDE 1049 (1114)
Q Consensus 971 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1114)
....+++.|+|||.+.+..++.++||||||+++|||++ |..||.......... .....+.. ..
T Consensus 239 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~----~~~~~~~~--------~~---- 302 (343)
T cd05103 239 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC----RRLKEGTR--------MR---- 302 (343)
T ss_pred CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHH----HHHhccCC--------CC----
Confidence 22345678999999988899999999999999999997 899986543221111 11111110 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1050 KTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1050 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
.+......+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 303 ~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 303 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0011123588999999999999999999999999988653
No 169
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.8e-35 Score=331.65 Aligned_cols=258 Identities=22% Similarity=0.258 Sum_probs=201.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+++.+ +++.||+|++.+...........+..|+.++..++|++|+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46889999999999999999976 57889999986543322333456888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++++....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 99999999999986566789999999999999999999998 999999999999999999999999999976533222
Q ss_pred CccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+..........
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~----~~~~~~~i~~~~~-------- 225 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES----LVETYGKIMNHKE-------- 225 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC----HHHHHHHHhCCCc--------
Confidence 2333457999999999986 3457889999999999999999999997432 2222222221110
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFD--RPTMREVVLM 1082 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 1082 (1114)
+... ..........+.+++.+|+..+|.+ |++++|+++.
T Consensus 226 ~~~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 226 RFQF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cccC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0000 1111122346778888888654444 7899988765
No 170
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.3e-34 Score=317.13 Aligned_cols=252 Identities=23% Similarity=0.419 Sum_probs=204.7
Q ss_pred cCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.+|++.+.||+|+||.||+|.+.+++.+|+|++...... ...+.+|++++++++||+++++++++......++|||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 467888999999999999999887889999998654332 3568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++++|.+++......+++..+..++.+++.|++|||+. +++||||||+||+++.++.++|+|||.+.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 9999999999986666789999999999999999999998 9999999999999999999999999999865432222
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
......++..|+|||.+.+..++.++||||+|+++|||++ |+.||..... ...+... ..+. ....
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~~~~~~-~~~~---~~~~------ 222 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN----SEVVETI-NAGF---RLYK------ 222 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH----HHHHHHH-hCCC---CCCC------
Confidence 2223345678999999998889999999999999999998 8999864321 2222221 1110 0000
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
+......+.+++.+||+.+|++||++.|+++.|.
T Consensus 223 ---~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 ---PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 0112346889999999999999999999998873
No 171
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6.4e-35 Score=331.53 Aligned_cols=257 Identities=23% Similarity=0.252 Sum_probs=201.6
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|+.+ +++.||+|++.............+.+|..++..++|++|+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999976 68899999987543322333456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++......+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 99999999999986566789999999999999999999998 999999999999999999999999999987653333
Q ss_pred CccccccccccccCcccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.......|++.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+......... .
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~----~~~~~~i~~~~--------~ 225 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL----VETYGKIMNHE--------E 225 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH----HHHHHHHHcCC--------C
Confidence 33334579999999999875 4678899999999999999999999974332 22222222111 0
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFD--RPTMREVVL 1081 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1081 (1114)
+... +.........+.+++.+|+..++.+ |++++++++
T Consensus 226 ~~~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 226 RFQF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cccC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 0100 0111112346778899998865544 467887764
No 172
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.1e-34 Score=319.00 Aligned_cols=252 Identities=26% Similarity=0.333 Sum_probs=202.1
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|+..+.||+|+||+||+|.++ +++.||+|.+...........+.+..|+.++++++|++++++++.+.+++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 677789999999999999976 7899999998765443333345577899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 890 MARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 890 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
+++++|.+++... ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++..... ..
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~--~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQ 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCC--Cc
Confidence 9999999988643 34689999999999999999999998 999999999999999999999999999876432 22
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
......|+..|+|||++.+..++.++||||+||++|||++|+.||......... ........... .
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~~~~-------~------ 222 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEVQ-------E------ 222 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhhhhh-------h------
Confidence 223457899999999999999999999999999999999999999754322111 11111111100 0
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPT-----MREVVL 1081 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1081 (1114)
.........+.+++.+||+.||++||| ++|+++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 011112345789999999999999999 788876
No 173
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.7e-34 Score=323.26 Aligned_cols=263 Identities=24% Similarity=0.394 Sum_probs=202.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeCC---------------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceee
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRT---------------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVK 872 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 872 (1114)
.++|++.++||+|+||.||+|+... ...||+|++..... ......+.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT--KTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCcCe
Confidence 4679999999999999999998642 23589999875432 233567889999999999999999
Q ss_pred EEeEEEecCceEEEEecCCCCCHHHHhccCC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 001253 873 LYGFCYHQGSNLLMYEYMARGSLGELLHGAS-----------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSN 941 (1114)
Q Consensus 873 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-----------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 941 (1114)
+++++......++||||+++++|.+++.... ..+++..+..++.|+++|++|||+. +++||||||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 158 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATR 158 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChh
Confidence 9999999999999999999999999986432 2468899999999999999999998 9999999999
Q ss_pred CeEECCCCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh--CCCCCCCCCC
Q 001253 942 NILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT--GRAPVQPLDQ 1018 (1114)
Q Consensus 942 Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t--g~~p~~~~~~ 1018 (1114)
||++++++.+||+|||++........ .......++..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 99999999999999999976432221 11223345778999999998889999999999999999998 5567764332
Q ss_pred CCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1019 GGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
......+......... .. . ...+......+.+++.+||+.||++||++++|++.|++
T Consensus 239 -~~~~~~~~~~~~~~~~--~~----~---~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 -EQVIENTGEFFRNQGR--QI----Y---LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred -HHHHHHHHHhhhhccc--cc----c---CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1111211111111000 00 0 00011123478999999999999999999999999864
No 174
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.9e-34 Score=319.68 Aligned_cols=261 Identities=29% Similarity=0.409 Sum_probs=202.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe--cC
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH--QG 881 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 881 (1114)
.+|++.+.||+|+||+||+|..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 57888999999999999999853 57899999986543 2335678899999999999999999998754 34
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..++||||+++|+|.+++......+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 67899999999999999986666789999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCCc--cccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC-----------CHHHHHHH
Q 001253 962 IDMPQSKS--MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGG-----------DLVTWVRN 1028 (1114)
Q Consensus 962 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~-----------~~~~~~~~ 1028 (1114)
........ .....++..|+|||+..+..++.++||||+||++|||++|..|+....... .......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 54322111 112234456999999998889999999999999999999887654321100 00000001
Q ss_pred HHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1029 FIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
..... .. ...+......+.+++.+||+.+|++|||+.|+++.|++++
T Consensus 238 ~~~~~----------~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 238 LLKNN----------GR--LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHhcC----------Cc--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 11100 00 0111122346889999999999999999999999998763
No 175
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.8e-35 Score=333.99 Aligned_cols=246 Identities=27% Similarity=0.295 Sum_probs=194.5
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHH-HHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEIL-TLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+||+||+|+.+ +|+.||+|++.............+..|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999975 78999999997654333233344555554 56789999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.... .......
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~-~~~~~~~ 155 (325)
T cd05604 81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA-QSDTTTT 155 (325)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCC-CCCCccc
Confidence 999998873 45789999999999999999999998 999999999999999999999999999875321 2223345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..|++.|+|||++.+..++.++||||+||++|||++|+.||...+ ..+..+..... . ... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~----~~~~~~~~~~~-~---------~~~----~~ 217 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD----VAEMYDNILHK-P---------LVL----RP 217 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC----HHHHHHHHHcC-C---------ccC----CC
Confidence 679999999999999999999999999999999999999997533 22222222211 0 110 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
.....+.+++.+|++.+|.+||++++.++.+
T Consensus 218 ~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 218 GASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred CCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 1234577899999999999999986544443
No 176
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-34 Score=323.79 Aligned_cols=261 Identities=26% Similarity=0.421 Sum_probs=204.9
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCc--EEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGH--TVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 884 (1114)
++|++.+.||+|+||.||+|..+ ++. .+|+|.++.... ....+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS--ENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC--HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 57889999999999999999976 333 478888763222 22346688899999999 7999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 001253 885 LMYEYMARGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF 949 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 949 (1114)
+||||+++|+|.++++... ..+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 9999999999999996432 2588899999999999999999998 999999999999999999
Q ss_pred CeEEeeccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHH
Q 001253 950 EAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRN 1028 (1114)
Q Consensus 950 ~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~ 1028 (1114)
.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||..... ......
T Consensus 157 ~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~----~~~~~~ 230 (297)
T cd05089 157 ASKIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC----AELYEK 230 (297)
T ss_pred eEEECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHH
Confidence 9999999998743211 11111233567999999998889999999999999999997 9999965432 122222
Q ss_pred HHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCc
Q 001253 1029 FIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHF 1093 (1114)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 1093 (1114)
.... . . ...+......+.+++.+||+.+|.+||+++++++.|+++..+...+
T Consensus 231 ~~~~-~----------~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~ 282 (297)
T cd05089 231 LPQG-Y----------R--MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAY 282 (297)
T ss_pred HhcC-C----------C--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccc
Confidence 1111 0 0 0011122346889999999999999999999999999987665443
No 177
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.7e-37 Score=336.85 Aligned_cols=385 Identities=28% Similarity=0.387 Sum_probs=317.5
Q ss_pred CCCCccCEEEecCCccc-CCCCcccCCCCCCCEEEccCCCcccccccccccccccceeccccccccCCCCcccccCcccc
Q 001253 99 GGLVHLTALDLSFNQLS-RNIPKEIGNCSSLEVLNLNNNRLEAHIPKELGNLSSLTILNIYNNRISGPFPKEIGKLSALS 177 (1114)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 177 (1114)
+-|+.++..|+|+|.++ +..|.....+++++.|.|....+. .+|..++.|.+|++|.+++|++. .+-+++..|+.|+
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLR 81 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhH
Confidence 34567788888888887 467888888888888888888887 58888888888888888888887 5667778888888
Q ss_pred hhhhcccccCC-CCCCCccccccccceeccccccccccCCCCCCCCccceeeccccccCCCCccc-ccccccccEEEecC
Q 001253 178 QLVAYSNNISG-SLPPTLGNLKRLKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPKE-IGMLKYLTDVILWG 255 (1114)
Q Consensus 178 ~L~l~~n~i~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~~ 255 (1114)
.+.+..|++.. -+|+.+..|..|..|+|++|++. ..|..+..-+++-.|+||+|+|. .||.. |-+|+.|-.|||++
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhcccc
Confidence 88888888854 37888888899999999999888 78888888888999999999998 56655 55888889999999
Q ss_pred CcccCccccccccccccchhhcccccccCCchhhhcCCCccceeeecccccc-cccCccccccccccccccccccCCCCC
Q 001253 256 NQLSGVIPKELGNCTSLETLALYDNKQVGQLPKELGSIGSLKYLYIYRNELN-GTIPREIGKLSSALEIDFSENSLIGEI 334 (1114)
Q Consensus 256 N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~ls~N~l~~~~ 334 (1114)
|++. .+|+.+..+..|++|+|++|.+...--..+..+++|+.|.+++.+-+ ..+|.++..+.+|.++|+|.|++. .+
T Consensus 160 NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~v 237 (1255)
T KOG0444|consen 160 NRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IV 237 (1255)
T ss_pred chhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cc
Confidence 9998 67778899999999999999865544444556788888888887644 568999999999999999999987 78
Q ss_pred chhhhcccccceeecccccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCCccc-CCCCCCCCcC
Q 001253 335 PVELSKILGLELLYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLV-GGIPQRLGAY 413 (1114)
Q Consensus 335 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l 413 (1114)
|..+.++.+|+.|+|++|+|+. .........+|++|+||.|+++ ..|.+++.+++|+.|.+.+|++. ..+|..++.+
T Consensus 238 Pecly~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL 315 (1255)
T KOG0444|consen 238 PECLYKLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKL 315 (1255)
T ss_pred hHHHhhhhhhheeccCcCceee-eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhh
Confidence 9999999999999999999984 3444566789999999999999 78999999999999999999986 4588889999
Q ss_pred ccceEEEeecccccCCCCccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeec
Q 001253 414 SQLWVVDLSDNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVEL 493 (1114)
Q Consensus 414 ~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 493 (1114)
.+|+++..++|++. ..|..+|++..|+.|.|++|++. .+|+++.-++.|+.|+|..|.----.|..-..-++|+.-++
T Consensus 316 ~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYNI 393 (1255)
T KOG0444|consen 316 IQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYNI 393 (1255)
T ss_pred hhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeeec
Confidence 99999999999998 88999999999999999999998 68999999999999999998754233333222244554443
No 178
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.5e-34 Score=317.34 Aligned_cols=255 Identities=24% Similarity=0.412 Sum_probs=205.7
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
+..++|++.++||+|+||.||+|.+.++..+|+|.+..... ..+.+.+|+.++++++|+||+++++++.+ ...++
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYI 77 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChh----HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEE
Confidence 34578999999999999999999988788899998864322 24568889999999999999999999887 77899
Q ss_pred EEecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+|||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 99999999999999753 34678999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
..........++..|+|||++....++.++|||||||++|++++ |+.||...... +...+ +.....
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-~~~~~----~~~~~~-------- 221 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIRA----LERGYR-------- 221 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-HHHHH----HhCCCC--------
Confidence 22222223346678999999998889999999999999999999 89998753321 11111 111110
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
. +........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 222 ~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 M----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred C----CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0 0111223468899999999999999999999999875
No 179
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.8e-35 Score=332.34 Aligned_cols=240 Identities=25% Similarity=0.288 Sum_probs=190.8
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHH-HHHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEI-LTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
++||+|+||+||+|+.+ +|+.||+|++.+...........+..|. .+++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999986 6889999999755432222234444454 467889999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+.+.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~~ 155 (321)
T cd05603 81 GELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE-PEETTST 155 (321)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCC-CCCcccc
Confidence 999988863 35688888999999999999999998 999999999999999999999999999875322 2223345
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..|++.|+|||++.+..++.++||||+||++|||++|+.||...+ ........... .. ..+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~i~~~----------~~----~~~~ 217 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD----VSQMYDNILHK----------PL----QLPG 217 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC----HHHHHHHHhcC----------CC----CCCC
Confidence 679999999999999899999999999999999999999997532 22222222111 11 1111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMR 1077 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~ 1077 (1114)
.....+.+++.+|++.||.+||++.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 2234678999999999999999864
No 180
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-34 Score=318.58 Aligned_cols=254 Identities=26% Similarity=0.378 Sum_probs=201.2
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+++|+.++++++||||+++++++..++..++|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD---DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc---hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 367999999999999999999975 7889999998654322 245678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++++|.++++. ...+++..+..++.|++.|++|||+. +|+|||++|+||++++++.++|+|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 85 MEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 999999999999874 34689999999999999999999998 99999999999999999999999999998654221
Q ss_pred CCccccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
.......|++.|+|||.+. ...++.++||||+||++|||++|+.||...........+ ... ....+.
T Consensus 161 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~-----~~~----~~~~~~ 230 (267)
T cd06646 161 -AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM-----SKS----NFQPPK 230 (267)
T ss_pred -cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee-----ecC----CCCCCC
Confidence 2223456889999999874 345778999999999999999999998643321111000 000 000011
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
. .........+.+++.+||+.+|++||+++++++.
T Consensus 231 ~----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 231 L----KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred C----ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 1 0111223578899999999999999999999864
No 181
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.5e-34 Score=321.33 Aligned_cols=261 Identities=21% Similarity=0.379 Sum_probs=208.4
Q ss_pred HhcCCcCCceecccCCeEEEEEEeCC-----CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe-c
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLRT-----GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH-Q 880 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 880 (1114)
..++|++.+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+.++++++||||+++++++.. .
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 45789999999999999999999765 6889999886433 23345668889999999999999999998876 4
Q ss_pred CceEEEEecCCCCCHHHHhccCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEE
Q 001253 881 GSNLLMYEYMARGSLGELLHGAS-------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHV 953 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 953 (1114)
...++++||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+|+
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEE
Confidence 67899999999999999986432 4689999999999999999999998 9999999999999999999999
Q ss_pred eeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHh
Q 001253 954 GDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIR 1031 (1114)
Q Consensus 954 ~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 1031 (1114)
+|||+++.+...... ......++..|+|||++.+..++.++||||||+++||+++ |+.||..... .++. ....
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~-~~~~ 233 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP----FEMA-AYLK 233 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH----HHHH-HHHH
Confidence 999999865322221 1122346678999999998889999999999999999999 9999965322 1221 1122
Q ss_pred cCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1032 NNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
.... . .........+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 234 ~~~~--------~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 234 DGYR--------L----AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred cCCC--------C----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 1110 0 01111234688999999999999999999999999998654
No 182
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.6e-34 Score=316.37 Aligned_cols=250 Identities=23% Similarity=0.332 Sum_probs=203.6
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|++.++||+|+||.||++.+. +++.||+|.+...... ...+.+..|+.+++.++||||+++++++.+++..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS--SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch--HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4788899999999999999976 7899999998654322 235667889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHG-ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+++|++.+++.. ....+++.....++.|++.|+.|||+. +++|+||||+||++++++.++++|||.+.......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 154 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG- 154 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc-
Confidence 9999999998864 334678999999999999999999998 99999999999999999999999999998654322
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... ....... +..+...
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~----~~~~~~~-~~~~~~~----------- 218 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS----WKNLILK-VCQGSYK----------- 218 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC----HHHHHHH-HhcCCCC-----------
Confidence 22234568899999999998889999999999999999999999996432 2222221 1111110
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..+......+.+++.+||+.||++||++.|++..
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 -PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0111223467899999999999999999999864
No 183
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-34 Score=322.36 Aligned_cols=249 Identities=25% Similarity=0.383 Sum_probs=202.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.+|++.+.||+|+||.||+|... +++.||+|.+....... .+.+.+|+.+++.++||||+++++.+..+...|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~---~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch---HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 57889999999999999999965 68999999987544332 456888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.++++. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+.......
T Consensus 97 e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~- 170 (296)
T cd06654 97 EYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (296)
T ss_pred cccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccc-
Confidence 99999999999963 3578999999999999999999998 99999999999999999999999999987643221
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||......... ........ +..
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~----~~~~~~~~-------~~~--- 236 (296)
T cd06654 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL----YLIATNGT-------PEL--- 236 (296)
T ss_pred cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH----HHHhcCCC-------CCC---
Confidence 2223446889999999999888999999999999999999999999654321111 11111100 000
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+......+.+++.+||..||++||++.|+++
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 237 -QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred -CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 111223346788999999999999999999987
No 184
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-34 Score=326.36 Aligned_cols=263 Identities=25% Similarity=0.389 Sum_probs=207.5
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC--------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR--------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGF 876 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 876 (1114)
+..++|.+.+.||+|+||.||+|++. ++..+|+|.+..... ......+..|+.+++.+ +||||++++++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC--hHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 33478999999999999999999853 235699999875432 22345678899999999 79999999999
Q ss_pred EEecCceEEEEecCCCCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 001253 877 CYHQGSNLLMYEYMARGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSN 941 (1114)
Q Consensus 877 ~~~~~~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 941 (1114)
+...+..|+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~ 169 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 169 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHH
Confidence 999999999999999999999997432 2588999999999999999999998 9999999999
Q ss_pred CeEECCCCCeEEeeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 001253 942 NILLDDKFEAHVGDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQG 1019 (1114)
Q Consensus 942 Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~ 1019 (1114)
||++++++.+||+|||.++........ ......+++.|+|||++.+..++.++||||+||++|||++ |..||....
T Consensus 170 Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-- 247 (307)
T cd05098 170 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-- 247 (307)
T ss_pred heEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC--
Confidence 999999999999999998765321111 1112234578999999998889999999999999999998 888885432
Q ss_pred CCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccC
Q 001253 1020 GDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQ 1090 (1114)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1090 (1114)
..+. ...+..... .+.+......+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 248 --~~~~-~~~~~~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 248 --VEEL-FKLLKEGHR------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred --HHHH-HHHHHcCCC------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 1222 222222110 0111223347888999999999999999999999999987653
No 185
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8e-35 Score=329.52 Aligned_cols=244 Identities=23% Similarity=0.300 Sum_probs=195.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+|+..+.||+|+||+||+|+.+ +|+.||+|++...........+.+..|..+++.+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677889999999999999976 68999999998654333333456777888888875 578889999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..... .
T Consensus 81 Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~-~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD-G 155 (323)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC-C
Confidence 99999999999874 34689999999999999999999998 9999999999999999999999999998754322 2
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+...... .
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~----~~~~~~i~~~~----------~--- 218 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE----DELFQSIMEHN----------V--- 218 (323)
T ss_pred ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCC----------C---
Confidence 223345699999999999999999999999999999999999999975432 12222222111 0
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
..+......+.+++.+|++.+|.+|++.
T Consensus 219 -~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 -SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0111123467889999999999999985
No 186
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-34 Score=321.40 Aligned_cols=255 Identities=24% Similarity=0.398 Sum_probs=203.3
Q ss_pred cCCcCCceecccCCeEEEEEEe-----CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCce
Q 001253 809 DNFDERFVIGRGACGTVYRAVL-----RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 883 (1114)
++|++.+.||+|+||+||+|++ .++..||+|.+..... ......+.+|+.++++++||||+++++++..+...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN--PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC--HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4688889999999999999985 2467899999875332 23346788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhccC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC
Q 001253 884 LLMYEYMARGSLGELLHGA----------------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD 947 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 947 (1114)
|+||||+++++|.+++... ...+++.+...++.|++.||+|||+. +++||||||+||++++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 9999999999999998522 12578899999999999999999998 9999999999999999
Q ss_pred CCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHH
Q 001253 948 KFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTW 1025 (1114)
Q Consensus 948 ~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~ 1025 (1114)
++.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||..... ..
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-----~~ 234 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-----QE 234 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HH
Confidence 99999999999986532221 22233456778999999988889999999999999999998 8888864321 11
Q ss_pred HHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1026 VRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
+.+.+...... . .+......+.+++.+||+.||++||++.++.+.|+.
T Consensus 235 ~~~~~~~~~~~--------~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 VIEMVRKRQLL--------P----CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHcCCcC--------C----CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 22222221111 0 111123467889999999999999999999998875
No 187
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.7e-34 Score=322.43 Aligned_cols=258 Identities=26% Similarity=0.397 Sum_probs=204.3
Q ss_pred CCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCce
Q 001253 810 NFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 883 (1114)
+|++.+.||+|+||+||+|+.. ....+|+|.+..... ....+.+..|+.+++.++||||+++++.+..++..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4778899999999999999863 235688888865443 22346788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhccC-----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 001253 884 LLMYEYMARGSLGELLHGA-----------------------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKS 940 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~-----------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 940 (1114)
++||||+.+|+|.+++... ...+++.++..++.|++.|++|||+. +++||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 9999999999999998632 12478899999999999999999998 999999999
Q ss_pred CCeEECCCCCeEEeeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCC
Q 001253 941 NNILLDDKFEAHVGDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQ 1018 (1114)
Q Consensus 941 ~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~ 1018 (1114)
+||++++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999999865322211 1223346778999999988889999999999999999998 9999864321
Q ss_pred CCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1019 GGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
.. +........ . ...+......+.+++.+||+.+|++||+++|+++.|+++..+
T Consensus 236 -~~----~~~~~~~~~------~------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 236 -ER----LFNLLKTGY------R------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred -HH----HHHHHhCCC------C------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 11 112121110 0 011112234688999999999999999999999999998654
No 188
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.9e-34 Score=318.58 Aligned_cols=259 Identities=25% Similarity=0.389 Sum_probs=206.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeCC----CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCce
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRT----GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 883 (1114)
.++|++.++||+|+||.||+|.+.+ ...||+|....... ....+.+..|+.++++++||||+++++++.+ ...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 4568888999999999999999653 24689998865432 2345678899999999999999999998875 557
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++|+|.+++......+++..+..++.+++.|++|+|+. +++||||||+||+++.++.++++|||+++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence 899999999999999986666789999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
...........++..|+|||.+....++.++||||||+++||+++ |..||......+ .... +....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-~~~~----~~~~~-------- 225 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND-VIGR----IENGE-------- 225 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHH----HHcCC--------
Confidence 332222223345578999999988889999999999999999986 999997544321 1111 11111
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
.. ..+......+.+++.+|+.++|.+|||+.++++.|+++...
T Consensus 226 ~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 RL----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred cC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 01112234688899999999999999999999999998654
No 189
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8.8e-35 Score=341.45 Aligned_cols=264 Identities=20% Similarity=0.304 Sum_probs=195.4
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec------
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ------ 880 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 880 (1114)
.++|++.++||+|+||+||+|+.. +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 467999999999999999999975 68999999885432 1235699999999999999999987432
Q ss_pred --CceEEEEecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-CeEEe
Q 001253 881 --GSNLLMYEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF-EAHVG 954 (1114)
Q Consensus 881 --~~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~ 954 (1114)
...++||||+++ ++.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 135689999986 77776642 345789999999999999999999998 999999999999999665 79999
Q ss_pred eccCceecCCCCCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 955 DFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 955 DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
|||+|+.+.. ........||+.|+|||++.+. .++.++||||+||++|||++|.+||........+...++. ....
T Consensus 214 DFGla~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~-~~~p 290 (440)
T PTZ00036 214 DFGSAKNLLA--GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQV-LGTP 290 (440)
T ss_pred ccccchhccC--CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCC
Confidence 9999986542 2223345789999999998754 6899999999999999999999999765432222222211 1000
Q ss_pred ----------Cccccccccccc---CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHH--HHHHhh
Q 001253 1034 ----------SLVSGMLDARLN---LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVV--LMLSES 1086 (1114)
Q Consensus 1034 ----------~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl--~~L~~i 1086 (1114)
.+....++ ... .....+.....++.+++.+||+.||.+|||+.|++ ..++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFP-DVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred CHHHHHHhchhhhcccCC-ccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 00000000 000 00001111234688999999999999999999998 344544
No 190
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.4e-34 Score=314.99 Aligned_cols=249 Identities=27% Similarity=0.433 Sum_probs=200.9
Q ss_pred hcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEE-ecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCY-HQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv 886 (1114)
.++|++.+.||+|+||.||+|..+ |+.||+|.+.... ..+.+.+|+.++++++|+|++++++++. .+...++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 357889999999999999999876 7889999985432 2456889999999999999999999765 45678999
Q ss_pred EecCCCCCHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 887 YEYMARGSLGELLHGASS-TLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|||+++++|.++++.... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 999999999999975443 589999999999999999999998 9999999999999999999999999998864322
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ....... +..+. .
T Consensus 156 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~----~~~~~~~-~~~~~------~--- 217 (256)
T cd05082 156 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP----LKDVVPR-VEKGY------K--- 217 (256)
T ss_pred C----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC----HHHHHHH-HhcCC------C---
Confidence 1 22345678999999998889999999999999999997 999886432 2222221 11110 0
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
...+......+.+++.+||+.+|++|||+.++++.|+++
T Consensus 218 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 ---MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 011112234688999999999999999999999999864
No 191
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.7e-37 Score=338.33 Aligned_cols=364 Identities=24% Similarity=0.359 Sum_probs=219.9
Q ss_pred ccccceeccccccc-cccCCCCCCCCccceeeccccccCCCCcccccccccccEEEecCCcccCccccccccccccchhh
Q 001253 198 KRLKSFRAGQNLIS-GSLPSEIGGCESLQYLGLAQNQLSGEIPKEIGMLKYLTDVILWGNQLSGVIPKELGNCTSLETLA 276 (1114)
Q Consensus 198 ~~L~~L~l~~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 276 (1114)
+-.+-.++++|.++ +.+|.....++++++|-|...++. .+|++++.+++|++|.+++|++. .+-..++.++.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 33445566666666 566777777777777777777776 67777777777777777777777 3445677777777777
Q ss_pred cccccccCC-chhhhcCCCccceeeecccccccccCccccccccccccccccccCCCCCchhhhcccccceeeccccccc
Q 001253 277 LYDNKQVGQ-LPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLFENKLT 355 (1114)
Q Consensus 277 Ls~N~~~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 355 (1114)
+.+|++... +|..+..+..|+.|+|++|++. ..|..+...+++..|+||+|+|....-..|.+++.|-.|+|++|++.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh
Confidence 777776543 6666777777777777777776 66766666667777777777766554455666666666666666666
Q ss_pred CcccccccccccCCEEEcccccccccccCccccccceeeeeccCCccc-CCCCCCCCcCccceEEEeecccccCCCCccc
Q 001253 356 GVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLV-GGIPQRLGAYSQLWVVDLSDNHLTGKIPRHI 434 (1114)
Q Consensus 356 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 434 (1114)
. .|..+..+..|++|+|++|.+...--..+-.++.|..|.+++.+-+ ..+|.++..+.+|..+|||.|.+. ++|+.+
T Consensus 164 ~-LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecl 241 (1255)
T KOG0444|consen 164 M-LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECL 241 (1255)
T ss_pred h-cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHH
Confidence 3 3445566666666666666654322222333445555555554322 345555555666666666666665 555555
Q ss_pred cccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecccccCC-CCccccccccccCc
Q 001253 435 CRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFS-GPIPTEIGNCNALQ 513 (1114)
Q Consensus 435 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~ 513 (1114)
..+++|+.|+||+|+|+ .+.-+.....+|++|+||.|+++ .+|+.+++|++|+.|++.+|+++ .-+|+.++.+.+|+
T Consensus 242 y~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Le 319 (1255)
T KOG0444|consen 242 YKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLE 319 (1255)
T ss_pred hhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhH
Confidence 55555666666666555 33444455555555555555555 55555555555555555555554 22455555555555
Q ss_pred EEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccc
Q 001253 514 RLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKF 570 (1114)
Q Consensus 514 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 570 (1114)
.+..++|.+. ..|+.++.+..|+.|.|+.|++. .+|..+.-++.|+.|||..|.-
T Consensus 320 vf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 320 VFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred HHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 5555555554 45555555555555555555554 4555555555555555555543
No 192
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-34 Score=320.55 Aligned_cols=257 Identities=27% Similarity=0.406 Sum_probs=202.3
Q ss_pred HhcCCcCCceecccCCeEEEEEEeCC------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLRT------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ 880 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 880 (1114)
..++|++.+.||+|+||.||+|.+.. +..||+|.+..... ......+..|+.+++.++|+||+++++++.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS--EQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 34679999999999999999999753 56789998764432 22345688899999999999999999999998
Q ss_pred CceEEEEecCCCCCHHHHhccCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC---Ce
Q 001253 881 GSNLLMYEYMARGSLGELLHGAS------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF---EA 951 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~ 951 (1114)
+..++||||+++++|.++++... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++ .+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcce
Confidence 99999999999999999987443 2589999999999999999999998 999999999999998754 59
Q ss_pred EEeeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHH
Q 001253 952 HVGDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNF 1029 (1114)
Q Consensus 952 kl~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 1029 (1114)
||+|||+++........ .......+..|+|||++.+..++.++|||||||++|||++ |..||..... ..... .
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~----~~~~~-~ 233 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN----QEVME-F 233 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHH-H
Confidence 99999999865322111 1112234568999999998899999999999999999997 9999874332 11111 1
Q ss_pred HhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1030 IRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
+..... ...+......+.+++.+|++.+|++||++.+|++.|++
T Consensus 234 ~~~~~~------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 234 VTGGGR------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHcCCc------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 211110 01111223468899999999999999999999998863
No 193
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-34 Score=324.90 Aligned_cols=262 Identities=23% Similarity=0.399 Sum_probs=208.3
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC--------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR--------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGF 876 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 876 (1114)
+..++|++.+.||+|+||.||+|++. ++..||+|.+..... ....+.+.+|+.+++.+ +||||++++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc--hHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 44578999999999999999999742 245799999864432 23356788999999999 89999999999
Q ss_pred EEecCceEEEEecCCCCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 001253 877 CYHQGSNLLMYEYMARGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSN 941 (1114)
Q Consensus 877 ~~~~~~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 941 (1114)
+......++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +++||||||+
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 166 (304)
T cd05101 90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAAR 166 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccc
Confidence 999999999999999999999987432 3578889999999999999999998 9999999999
Q ss_pred CeEECCCCCeEEeeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 001253 942 NILLDDKFEAHVGDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQG 1019 (1114)
Q Consensus 942 Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~ 1019 (1114)
||++++++.+||+|||.++........ ......+++.|+|||++.+..++.++||||||+++||+++ |..||....
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-- 244 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-- 244 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--
Confidence 999999999999999999876432221 1223346678999999998889999999999999999998 778875432
Q ss_pred CCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1020 GDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
..+..+. +...... ..+......+.+++.+||+.+|.+||++.|+++.|+++..-
T Consensus 245 --~~~~~~~-~~~~~~~------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 245 --VEELFKL-LKEGHRM------------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred --HHHHHHH-HHcCCcC------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2222222 2221110 01112334688899999999999999999999999998653
No 194
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.8e-34 Score=321.16 Aligned_cols=261 Identities=25% Similarity=0.380 Sum_probs=204.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--C
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--G 881 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 881 (1114)
..|++.+.||+|+||.||+|+++ ++..||+|.++.... ......+.+|+.+++.++|||++++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc--HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 34788899999999999999842 578899999865432 23356789999999999999999999998775 5
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..++||||+++++|.+++......+++.++..++.|++.||+|+|+. +++||||||+||+++.++.++|+|||+++.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccc
Confidence 67899999999999999976555789999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCC--ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC----------CCCHHHHHHHH
Q 001253 962 IDMPQSK--SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQ----------GGDLVTWVRNF 1029 (1114)
Q Consensus 962 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~----------~~~~~~~~~~~ 1029 (1114)
....... ......++..|+|||+..+..++.++|||||||++|||++++.|...... ...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 5432221 12234577789999999888899999999999999999998766432110 00011111111
Q ss_pred HhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1030 IRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
...... .+.+......+.+++.+||+.+|++||++.++++.++++
T Consensus 239 ~~~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 LEEGKR------------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHcCcc------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111100 011112345789999999999999999999999999876
No 195
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.8e-35 Score=332.99 Aligned_cols=240 Identities=25% Similarity=0.285 Sum_probs=194.3
Q ss_pred ceecccCCeEEEEEEe----CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecC
Q 001253 815 FVIGRGACGTVYRAVL----RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
+.||+|+||+||+++. .+|+.||+|++....... .....+..|++++++++||||+++++++.+++..|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999985 368899999997644321 22345678999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcc
Q 001253 891 ARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSM 970 (1114)
Q Consensus 891 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 970 (1114)
++|+|.+++.+ ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..... ....
T Consensus 81 ~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~ 155 (318)
T cd05582 81 RGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKA 155 (318)
T ss_pred CCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCce
Confidence 99999999974 34689999999999999999999998 9999999999999999999999999999865322 1223
Q ss_pred ccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcc
Q 001253 971 SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEK 1050 (1114)
Q Consensus 971 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1114)
....|++.|+|||++.+..++.++|||||||++|||++|+.||..... .......... . .. .
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~----~~~~~~i~~~-~---------~~----~ 217 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR----KETMTMILKA-K---------LG----M 217 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH----HHHHHHHHcC-C---------CC----C
Confidence 456799999999999988899999999999999999999999964321 2222221111 1 11 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 001253 1051 TVSHMITVLKIAMLCTNISPFDRPTMRE 1078 (1114)
Q Consensus 1051 ~~~~~~~l~~li~~cl~~dP~~RPs~~e 1078 (1114)
+......+.+++.+||+.||++||++.+
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1122346788999999999999999655
No 196
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.7e-35 Score=334.75 Aligned_cols=253 Identities=25% Similarity=0.328 Sum_probs=197.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..+.||+|+||+||+|+.+ +++.||+|++.............++.|+.++..++||+|+++++++.+++..|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999976 68999999997654333344567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 81 E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 99999999999974 34689999999999999999999998 999999999999999999999999999875421100
Q ss_pred ----------------------------------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCC
Q 001253 968 ----------------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPV 1013 (1114)
Q Consensus 968 ----------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~ 1013 (1114)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0112357999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCC---HHHHH
Q 001253 1014 QPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPT---MREVV 1080 (1114)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl 1080 (1114)
..... ........... ......... .....+.+++.+++ .||.+|++ +.|++
T Consensus 237 ~~~~~----~~~~~~i~~~~--------~~~~~p~~~--~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 291 (360)
T cd05627 237 CSETP----QETYRKVMNWK--------ETLVFPPEV--PISEKAKDLILRFC-TDSENRIGSNGVEEIK 291 (360)
T ss_pred CCCCH----HHHHHHHHcCC--------CceecCCCC--CCCHHHHHHHHHhc-cChhhcCCCCCHHHHh
Confidence 75432 11222211100 001100111 12235667777766 49999986 45544
No 197
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.9e-34 Score=331.66 Aligned_cols=266 Identities=23% Similarity=0.304 Sum_probs=200.8
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC----
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG---- 881 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 881 (1114)
..++|++.+.||+|+||.||+|... +++.||||++....... ...+.+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-HHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4478999999999999999999975 68899999987654322 33456778999999999999999999986433
Q ss_pred --ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 882 --SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 882 --~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
..|+||||+++ ++.+.+. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccc
Confidence 46999999976 6777665 3578899999999999999999998 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH------------
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR------------ 1027 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~------------ 1027 (1114)
+.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||............++
T Consensus 167 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 167 RTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred ccCCC--ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 86532 2223445789999999999999999999999999999999999999975432211111111
Q ss_pred ------HHHhcCCcccccc------cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1028 ------NFIRNNSLVSGML------DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1028 ------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
.+........... +................+.+++.+|++.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 1111100000000 000000011111223467899999999999999999999874
No 198
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.8e-34 Score=320.85 Aligned_cols=263 Identities=24% Similarity=0.406 Sum_probs=204.7
Q ss_pred hcCCcCCceecccCCeEEEEEEeCC-----------------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCce
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRT-----------------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNI 870 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 870 (1114)
..+|++.++||+|+||.||+|+... +..||+|++...... ...+.+.+|++++++++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCCCE
Confidence 4678999999999999999998642 245899998755432 335678899999999999999
Q ss_pred eeEEeEEEecCceEEEEecCCCCCHHHHhccCC----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 001253 871 VKLYGFCYHQGSNLLMYEYMARGSLGELLHGAS----------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKS 940 (1114)
Q Consensus 871 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 940 (1114)
+++++++..++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 999999999999999999999999999987433 2689999999999999999999998 999999999
Q ss_pred CCeEECCCCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh--CCCCCCCCC
Q 001253 941 NNILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT--GRAPVQPLD 1017 (1114)
Q Consensus 941 ~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t--g~~p~~~~~ 1017 (1114)
+||+++.++.++|+|||.++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 999999999999999999986532221 12233456788999999988889999999999999999998 667775433
Q ss_pred CCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1018 QGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
.. ............... .. ....+.....++.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ~~-~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 DQ-QVIENAGHFFRDDGR-------QI--YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred hH-HHHHHHHhccccccc-------cc--cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 21 111111111111000 00 001111223468999999999999999999999998863
No 199
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.2e-34 Score=315.73 Aligned_cols=255 Identities=24% Similarity=0.394 Sum_probs=201.2
Q ss_pred CcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc----
Q 001253 811 FDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS---- 882 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 882 (1114)
|++.+.||+|+||+||+|.+. .+..||+|+++..... ......+..|+..++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 567889999999999999964 2368999998754332 2334578899999999999999999999876554
Q ss_pred --eEEEEecCCCCCHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEee
Q 001253 883 --NLLMYEYMARGSLGELLHGA-----SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGD 955 (1114)
Q Consensus 883 --~~lv~E~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 955 (1114)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|+|+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 68999999999999988532 23689999999999999999999998 999999999999999999999999
Q ss_pred ccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 956 FGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 956 fG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
||.++........ ......++..|+|||+..+..++.++|||||||++|||++ |..||..... .+.... ...+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~----~~~~~~-~~~~ 231 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN----HEIYDY-LRHG 231 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH----HHHHHH-HHcC
Confidence 9999865432221 1122345678999999988889999999999999999999 8888864332 112211 1111
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.. . ..+......+.+++.+||+.||.+||++.|+++.|+++
T Consensus 232 ~~--------~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 NR--------L----KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC--------C----CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 0 11112334788999999999999999999999999875
No 200
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2e-34 Score=319.94 Aligned_cols=255 Identities=27% Similarity=0.437 Sum_probs=202.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 881 (1114)
..+|+..++||+|+||+||+|... ++..+|+|.+.... ......+.+|+++++.++|+||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 356888899999999999999742 35688999876433 233567899999999999999999999999999
Q ss_pred ceEEEEecCCCCCHHHHhccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC
Q 001253 882 SNLLMYEYMARGSLGELLHGAS--------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD 947 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 947 (1114)
..++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC
Confidence 9999999999999999987432 2578999999999999999999998 9999999999999999
Q ss_pred CCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHH
Q 001253 948 KFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTW 1025 (1114)
Q Consensus 948 ~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~ 1025 (1114)
++.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~ 233 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT----EA 233 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH----HH
Confidence 99999999999976532221 11223345788999999999999999999999999999998 88998643321 11
Q ss_pred HHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1026 VRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
.......... ..+......+.+++.+||+.||.+||++.||++.|++
T Consensus 234 ~~~~~~~~~~-------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 IECITQGREL-------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHcCccC-------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111111000 0111223457899999999999999999999998864
No 201
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.3e-34 Score=314.06 Aligned_cols=248 Identities=23% Similarity=0.380 Sum_probs=197.3
Q ss_pred eecccCCeEEEEEEeC---CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 816 VIGRGACGTVYRAVLR---TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+||+|+||+||+|.++ +++.+|+|+++.... .....+.+..|+.+++.++||||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN-DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC-cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 5899999999999753 578899999864433 3344567889999999999999999999885 4567899999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc--c
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS--M 970 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~--~ 970 (1114)
|+|.+++.. ...+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+||+|||.++......... .
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 80 GPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 999999974 34689999999999999999999998 99999999999999999999999999998654332211 1
Q ss_pred ccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCc
Q 001253 971 SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDE 1049 (1114)
Q Consensus 971 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1114)
....++..|+|||.+....++.++|||||||++|||++ |+.||..... . ... ..+..+.. .+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~---~~~-~~i~~~~~------------~~ 218 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-N---EVT-QMIESGER------------ME 218 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-H---HHH-HHHHCCCC------------CC
Confidence 22234678999999988889999999999999999998 9999975432 1 111 12222110 01
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1050 KTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1050 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.+......+.++|.+||+.||++||++.+|++.|++.
T Consensus 219 ~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 219 CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1112334688999999999999999999999999863
No 202
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-34 Score=321.49 Aligned_cols=255 Identities=25% Similarity=0.382 Sum_probs=202.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
.+|++.++||+|+||+||+|++. ++..||+|++..... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE--GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 34677789999999999999864 247899999875432 2335668899999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC
Q 001253 883 NLLMYEYMARGSLGELLHGA---------------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD 947 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 947 (1114)
.++++||+++++|.+++... ...+++..+..++.|++.||+|+|+. +++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecC
Confidence 99999999999999998521 23578888999999999999999998 9999999999999999
Q ss_pred CCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHH
Q 001253 948 KFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTW 1025 (1114)
Q Consensus 948 ~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~ 1025 (1114)
++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||+||++|||++ |..||..... .++
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~~ 235 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDV 235 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH----HHH
Confidence 99999999999886532221 11233456789999999988889999999999999999998 7888864322 222
Q ss_pred HHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1026 VRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
... +...... ..+......+.+++.+||+.+|.+||+++||++.|+.
T Consensus 236 ~~~-i~~~~~~------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 IEM-IRNRQVL------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHH-HHcCCcC------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 222 2221110 0111233458899999999999999999999999875
No 203
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.5e-34 Score=312.94 Aligned_cols=250 Identities=29% Similarity=0.459 Sum_probs=205.5
Q ss_pred hcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.++|++.+.||+|+||.||+|... |+.||+|++..... ..+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 467888999999999999999986 88999999975543 3567888999999999999999999999989999999
Q ss_pred ecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||+++++|.++++... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 9999999999997543 3689999999999999999999998 99999999999999999999999999998653211
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
....++..|+|||++.+..++.++||||+|+++||+++ |+.||..... . .+...+.... .
T Consensus 157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~-~~~~~~~~~~--------~-- 217 (256)
T cd05039 157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----K-DVVPHVEKGY--------R-- 217 (256)
T ss_pred ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH----H-HHHHHHhcCC--------C--
Confidence 12345678999999988889999999999999999997 9999864321 1 1222222110 0
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
...+......+.+++.+|++.+|++||++.|++++|+.+
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 218 --MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 011112235688999999999999999999999999764
No 204
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.3e-34 Score=319.28 Aligned_cols=257 Identities=24% Similarity=0.388 Sum_probs=205.0
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ 880 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 880 (1114)
..++|++.+.||+|+||.||+|.++ ++..||+|.+..... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS--MRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC--HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 3578999999999999999999975 236899999864432 22345688899999999999999999999999
Q ss_pred CceEEEEecCCCCCHHHHhccCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCe
Q 001253 881 GSNLLMYEYMARGSLGELLHGAS---------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEA 951 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 951 (1114)
...++||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCE
Confidence 99999999999999999986322 2478889999999999999999998 99999999999999999999
Q ss_pred EEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHH
Q 001253 952 HVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNF 1029 (1114)
Q Consensus 952 kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 1029 (1114)
||+|||+++....... .......++..|+|||.+.+..++.++|||||||++||+++ |..||..... ....+.
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~~~- 233 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN----EEVLKF- 233 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH----HHHHHH-
Confidence 9999999986543222 12233456789999999988889999999999999999998 8888864332 122221
Q ss_pred HhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1030 IRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
...... . ..+......+.+++.+||+.+|++|||+.++++.|++
T Consensus 234 ~~~~~~--------~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 234 VIDGGH--------L----DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HhcCCC--------C----CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111111 0 0111124568899999999999999999999998863
No 205
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.4e-34 Score=312.33 Aligned_cols=249 Identities=26% Similarity=0.427 Sum_probs=205.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..++||+|+||.||+|+++ +++.||+|.+..... .+++.+|++++++++||||+++++++.++...|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 67888999999999999999987 478999999864432 567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++......+++..+..++.|+++|+.|||+. +++||||+|+||+++.++.++|+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~- 153 (256)
T cd06612 78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM- 153 (256)
T ss_pred ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc-
Confidence 99999999999986677899999999999999999999998 99999999999999999999999999998654322
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......++..|+|||++.+..++.++||||||+++|+|++|+.||........... ..... ...
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~------~~~---- 218 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-----IPNKP------PPT---- 218 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-----hccCC------CCC----
Confidence 122344588899999999988999999999999999999999999975433211110 00000 000
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+||+.||++|||+.|+++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 1112223346889999999999999999999875
No 206
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=8.2e-34 Score=314.93 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=199.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..++||+|+||+||+|++. +++.||+|++..... ....+.+..|+.++++++||||+++++++..++..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT--VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 36788899999999999999965 789999999865432 233567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||++++++..+. .+++..+..++.|++.|++|+|+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 79 EFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred ecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 999999997653 467888999999999999999998 9999999999999999999999999999865322
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHH--HHHHHhcCCccccccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTW--VRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
......|+..|+|||++.+..++.++||||+|+++|+|++|+.||............ ......... ....
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------~~~~- 220 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED------PPVL- 220 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC------CCCC-
Confidence 223457899999999999989999999999999999999999999754322211111 111111100 0000
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
........+.+++.+|++.+|++||+++|+++.
T Consensus 221 ----~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 ----PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ----CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011123467899999999999999999998764
No 207
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8e-34 Score=325.74 Aligned_cols=193 Identities=26% Similarity=0.360 Sum_probs=167.7
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
....+|++.+.||+|+||+||+|+.+ +++.||+|+..... ...|+.++++++||||+++++++......+
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEEeCCeeE
Confidence 44568999999999999999999976 57889999753221 245899999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+||||+. ++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++...
T Consensus 134 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~- 208 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV- 208 (357)
T ss_pred EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc-
Confidence 9999996 589998876677899999999999999999999998 99999999999999999999999999997532
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCC
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPV 1013 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~ 1013 (1114)
.........||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 209 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 209 -VAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred -cCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 122223457999999999999999999999999999999999865554
No 208
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.4e-34 Score=312.46 Aligned_cols=249 Identities=24% Similarity=0.396 Sum_probs=198.3
Q ss_pred ceecccCCeEEEEEEeC-C---CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecC
Q 001253 815 FVIGRGACGTVYRAVLR-T---GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
++||+|+||.||+|.+. . +..||+|.+...... ...+.+..|+.+++.++||||+++++++. ....++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999864 2 268999998755443 33567889999999999999999999876 45679999999
Q ss_pred CCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcc
Q 001253 891 ARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSM 970 (1114)
Q Consensus 891 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 970 (1114)
++|+|.+++.... .+++..+..++.|++.|++|||.. +++||||||+||+++.++.+||+|||.++..........
T Consensus 78 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 78 PLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 9999999998544 789999999999999999999998 999999999999999999999999999986643322111
Q ss_pred --ccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 971 --SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 971 --~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
....++..|+|||...+..++.++||||||+++|||++ |..||..... .+...+ +......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-~~~~~~----~~~~~~~----------- 217 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-AEVIAM----LESGERL----------- 217 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-HHHHHH----HHcCCcC-----------
Confidence 11223568999999998899999999999999999998 9999865432 112222 2111100
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
..+......+.+++.+||+.+|++||++.++++.|+++.
T Consensus 218 -~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 -PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 111122346889999999999999999999999999863
No 209
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5e-34 Score=315.66 Aligned_cols=255 Identities=23% Similarity=0.386 Sum_probs=198.6
Q ss_pred CcCCceecccCCeEEEEEEeCC-Cc--EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec------C
Q 001253 811 FDERFVIGRGACGTVYRAVLRT-GH--TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ------G 881 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 881 (1114)
|.+.++||+|+||.||+|++.+ +. .||+|.++.... .....+.+..|+.+++.++||||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3466789999999999999764 33 689998876533 223356788899999999999999999987532 2
Q ss_pred ceEEEEecCCCCCHHHHhcc-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeec
Q 001253 882 SNLLMYEYMARGSLGELLHG-----ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDF 956 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 956 (1114)
..++||||+++|+|.+++.. ....+++.....++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 46899999999999998742 234589999999999999999999998 9999999999999999999999999
Q ss_pred cCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCC
Q 001253 957 GLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNS 1034 (1114)
Q Consensus 957 G~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1034 (1114)
|+++.+...... ......+++.|+|||...+..++.++||||||+++|||++ |+.||..... .. ..+.+..+.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~-~~~~~~~~~ 231 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN----SE-IYDYLRQGN 231 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH----HH-HHHHHHcCC
Confidence 999875432211 1122346778999999999899999999999999999999 7888864322 11 122222211
Q ss_pred cccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1035 LVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.. ..+......+.+++.+||+.||++|||+.++++.|+++
T Consensus 232 ~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RL------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 10 01112234588999999999999999999999999875
No 210
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=9.1e-34 Score=317.51 Aligned_cols=263 Identities=23% Similarity=0.385 Sum_probs=202.7
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-----------------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCce
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-----------------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNI 870 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 870 (1114)
.++|++.++||+|+||+||++.+. ++..||+|++..... .....++.+|+.+++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN--KNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCc
Confidence 357999999999999999998643 234689999875432 2335678899999999999999
Q ss_pred eeEEeEEEecCceEEEEecCCCCCHHHHhccCC----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 001253 871 VKLYGFCYHQGSNLLMYEYMARGSLGELLHGAS----------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKS 940 (1114)
Q Consensus 871 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 940 (1114)
+++++++..++..++||||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +++||||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp 158 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLAT 158 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCh
Confidence 999999999999999999999999999986432 2467889999999999999999998 999999999
Q ss_pred CCeEECCCCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh--CCCCCCCCC
Q 001253 941 NNILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT--GRAPVQPLD 1017 (1114)
Q Consensus 941 ~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t--g~~p~~~~~ 1017 (1114)
+||++++++.++|+|||+++.+..... .......+++.|+|||...+..++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05095 159 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238 (296)
T ss_pred heEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence 999999999999999999986532221 11222345678999999888889999999999999999998 677886443
Q ss_pred CCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1018 QGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
... ............... . . .+.+......+.+++.+||+.||.+||++.||++.|++
T Consensus 239 ~~~-~~~~~~~~~~~~~~~--~---~----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 239 DEQ-VIENTGEFFRDQGRQ--V---Y----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred hHH-HHHHHHHHHhhcccc--c---c----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 221 111111111111000 0 0 01111223568899999999999999999999999874
No 211
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.8e-34 Score=318.61 Aligned_cols=264 Identities=22% Similarity=0.313 Sum_probs=194.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC---CCCceeeEEeEEEec-----
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI---RHRNIVKLYGFCYHQ----- 880 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~----- 880 (1114)
+|++.+.||+|+||+||+|+.+ +++.||+|.++....... ....+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDG-LPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCC-CchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 4788899999999999999976 689999999875433221 123445666666555 799999999998642
Q ss_pred CceEEEEecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 881 GSNLLMYEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
...++||||+++ ++.+++.... ..+++..+..++.|++.||+|+|+. +++||||||+||+++.++.+||+|||++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcc
Confidence 357899999985 8988886433 4589999999999999999999998 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC---Ccc
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN---SLV 1036 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~ 1036 (1114)
+.... ........|+..|+|||++.+..++.++||||+||++|||++|++||......+....... ..... .+.
T Consensus 156 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~ 232 (288)
T cd07863 156 RIYSC--QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD-LIGLPPEDDWP 232 (288)
T ss_pred ccccC--cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHH-HhCCCChhhCc
Confidence 86542 2222345689999999999988999999999999999999999999965433222222111 11000 000
Q ss_pred ccc--ccccccCCC-----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGM--LDARLNLQD-----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~--~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
... ......... .........+.+++.+|++.||++|||+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 000000000 001122346789999999999999999999874
No 212
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5.3e-34 Score=316.58 Aligned_cols=263 Identities=26% Similarity=0.456 Sum_probs=210.3
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCc----EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGH----TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
..+|++.+.||+|+||+||+|.++ +|+ .||+|+...... ......+.+|+..+++++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 467889999999999999999975 333 589998765543 2335678899999999999999999999987 78
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
.++||||+++|+|.++++.....+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++..
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 8999999999999999987667799999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCCc-cccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 963 DMPQSKS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 963 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
....... .....++..|+|||.+....++.++||||||+++||+++ |+.||..... .+ +...+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~-~~~~~~~~~~----- 229 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA----VE-IPDLLEKGER----- 229 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH----HH-HHHHHhCCCC-----
Confidence 4222211 112234578999999988889999999999999999998 9999865432 11 2222221110
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCc
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHF 1093 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 1093 (1114)
. ..+......+.+++.+||..||.+||++.++++.|+++.+...++
T Consensus 230 ---~----~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~ 275 (279)
T cd05057 230 ---L----PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQRY 275 (279)
T ss_pred ---C----CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCcce
Confidence 0 011112236788999999999999999999999999987765554
No 213
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=9.9e-34 Score=318.80 Aligned_cols=265 Identities=25% Similarity=0.392 Sum_probs=202.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||.||+|.+. ++..||+|.+..... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK--PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36889999999999999999976 688899998865432 233556888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.++++.. ..+++..+..++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 79 EHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred eccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 999999999999744 56889999999999999999999732 8999999999999999999999999998754322
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccc---c-----
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSG---M----- 1039 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~----- 1039 (1114)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... .....+............. .
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 -MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred -ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-hhHHHhhcCccccccccCCcccccCCCC
Confidence 22345789999999999888899999999999999999999999864431 1111111110000000000 0
Q ss_pred -----------ccccccC-CCcc-cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1040 -----------LDARLNL-QDEK-TVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1040 -----------~~~~~~~-~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
.+..... .... .......+.+++.+||+.+|++||+++|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 0000 00123468899999999999999999998876
No 214
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.3e-34 Score=330.67 Aligned_cols=264 Identities=22% Similarity=0.299 Sum_probs=199.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec------
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ------ 880 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 880 (1114)
.++|++.+.||+|+||.||+|... +++.||||++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc-hhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 478999999999999999999975 68899999997654322 2345677899999999999999999987543
Q ss_pred CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCce
Q 001253 881 GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 960 (1114)
...|+||||+++ ++.+.+. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 356999999976 7777775 3578899999999999999999998 99999999999999999999999999998
Q ss_pred ecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH------------
Q 001253 961 VIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRN------------ 1028 (1114)
Q Consensus 961 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~------------ 1028 (1114)
.... ........|++.|+|||++.+..++.++||||+||++|||++|+.||...+..+.....++.
T Consensus 175 ~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 175 TAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ccCC--CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 6532 22234457899999999999999999999999999999999999999754432211111110
Q ss_pred ------HHhcCCcccc-----ccc-ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1029 ------FIRNNSLVSG-----MLD-ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1029 ------~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.......... ... ................+.+++.+|++.||.+|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000 000 0000000111112346789999999999999999999987
No 215
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.2e-34 Score=318.90 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=199.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+.|++.++||+|+||.||+|... ++..+|+|.+.... ....+.+.+|+.+++.++|||++++++++..+...++||
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEE
Confidence 34677789999999999999976 57788999885432 233566888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++......+++..+..++.|+++||+|||+. +++||||||+||+++.++.+|++|||++..... ..
T Consensus 82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~-~~ 157 (282)
T cd06643 82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-TI 157 (282)
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccc-cc
Confidence 99999999998876566799999999999999999999998 999999999999999999999999999876432 12
Q ss_pred CccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.......+++.|+|||++. +..++.++||||+||++|||++|+.||..... .+.......... .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~~~~~~~~~~~~-------~ 226 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP----MRVLLKIAKSEP-------P 226 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH----HHHHHHHhhcCC-------C
Confidence 2233456899999999873 45577899999999999999999999865332 111111111100 0
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. ..+......+.+++.+||+.||++||++.++++
T Consensus 227 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 227 TL----AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred CC----CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 011122346889999999999999999998864
No 216
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.7e-34 Score=315.25 Aligned_cols=256 Identities=25% Similarity=0.430 Sum_probs=204.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CC---cEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TG---HTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
.+|++.+.||+|+||.||+|+++ ++ ..||||++.... .....+.|..|+..++.++||||+++++++..+...+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 35788899999999999999975 33 369999986543 2334567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+||||+++++|.+++......+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 99999999999999986667789999999999999999999998 999999999999999999999999999876532
Q ss_pred CCCCc-cc-cc--cccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 965 PQSKS-MS-AI--AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 965 ~~~~~-~~-~~--~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
..... .. .. ..+..|+|||++.+..++.++||||+||++||+++ |..||..... ....+. +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~----~~~~~~-i~~~~----- 228 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----QDVINA-IEQDY----- 228 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH----HHHHHH-HHcCC-----
Confidence 22111 11 11 12457999999998899999999999999999886 9999865432 111111 11110
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.. ..+......+.+++.+||+.+|.+||++.+++..|+++
T Consensus 229 ---~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 ---RL----PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---cC----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 11112234678899999999999999999999999875
No 217
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7.1e-34 Score=313.60 Aligned_cols=254 Identities=27% Similarity=0.400 Sum_probs=199.8
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
.+++.+.....||+|+||+||+|+++ ++..||+|.+..... ...+.+.+|+.++++++|+||+++++++..++..+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS---RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH---HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 44566666778999999999999965 678899998865432 23567889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-CCCeEEeeccCcee
Q 001253 885 LMYEYMARGSLGELLHGASSTL--DWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD-KFEAHVGDFGLAKV 961 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG~a~~ 961 (1114)
+||||+++++|.+++......+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||.+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999998554445 8888899999999999999998 9999999999999976 67999999999876
Q ss_pred cCCCCCCccccccccccccCccccccCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYTMK--VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
..... .......|++.|+|||++.+.. ++.++||||+|+++|+|++|+.||........ ..+.......
T Consensus 159 ~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-~~~~~~~~~~------- 229 (268)
T cd06624 159 LAGIN-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-AMFKVGMFKI------- 229 (268)
T ss_pred cccCC-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-hHhhhhhhcc-------
Confidence 53211 2223346889999999986543 78899999999999999999999965332111 1111100000
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....+......+.+++.+||+.+|.+|||+.|+++
T Consensus 230 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 -------HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred -------CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 01112223346889999999999999999999875
No 218
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.2e-34 Score=313.17 Aligned_cols=238 Identities=24% Similarity=0.404 Sum_probs=188.5
Q ss_pred eecccCCeEEEEEEeCC-------------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 816 VIGRGACGTVYRAVLRT-------------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
.||+|+||.||+|++.+ ...||+|++..... .....+.+|+..++.++||||+++++++..+..
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR---DISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh---hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 68999999999998542 23588888765432 234568889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC-------eEEee
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE-------AHVGD 955 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-------~kl~D 955 (1114)
.++||||+++|+|..+++.....+++..+..++.|+++||+|||+. +|+||||||+||+++.++. ++++|
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 9999999999999999886666799999999999999999999998 9999999999999987664 89999
Q ss_pred ccCceecCCCCCCccccccccccccCccccc-cCCCCcccchHHHHHHHHHHH-hCCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 956 FGLAKVIDMPQSKSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSYGVVLLELL-TGRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 956 fG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
||.+..... .....++..|+|||.+. +..++.++|||||||++|||+ +|..||...... . ...+...
T Consensus 156 ~g~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----~-~~~~~~~- 224 (262)
T cd05077 156 PGIPITVLS-----RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA----E-KERFYEG- 224 (262)
T ss_pred CCCCccccC-----cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh----H-HHHHHhc-
Confidence 999875421 12345788999999886 566889999999999999998 478877543211 1 1111111
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
.. .. .......+.+++.+||+.||++||++.++++.+
T Consensus 225 ~~---------~~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 QC---------ML----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred Cc---------cC----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 00 001124678999999999999999999999876
No 219
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-34 Score=322.60 Aligned_cols=261 Identities=26% Similarity=0.425 Sum_probs=205.2
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC--------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR--------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFC 877 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 877 (1114)
..++|.+.++||+|+||.||+|+.. .+..||+|++..... ......+..|+.+++++ +||||+++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT--DKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 3467889999999999999999752 245799999875433 22355688899999999 699999999999
Q ss_pred EecCceEEEEecCCCCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 001253 878 YHQGSNLLMYEYMARGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNN 942 (1114)
Q Consensus 878 ~~~~~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 942 (1114)
.+.+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|+|+. +++||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 99999999999999999999996432 3588999999999999999999998 99999999999
Q ss_pred eEECCCCCeEEeeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCC
Q 001253 943 ILLDDKFEAHVGDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGG 1020 (1114)
Q Consensus 943 ill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~ 1020 (1114)
|++++++.+||+|||.++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-- 242 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-- 242 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--
Confidence 99999999999999999865422211 1112234567999999998889999999999999999999 8888864321
Q ss_pred CHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcc
Q 001253 1021 DLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRR 1089 (1114)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1089 (1114)
.. +.+........ ..+......+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 243 --~~-~~~~~~~~~~~------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 243 --EE-LFKLLREGHRM------------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred --HH-HHHHHHcCCCC------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 11 11112211110 01112233677899999999999999999999999998653
No 220
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=324.62 Aligned_cols=251 Identities=22% Similarity=0.350 Sum_probs=204.5
Q ss_pred cCCcCCceecccCCeEEEEEEeCC-CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRT-GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+.|.++..||.|+||.||+|..++ +-..|.|++.... ++...+|.-|+.++..++||+||++++.|..++..+++.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks---eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS---EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc---hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 556777889999999999999773 4456677775433 334678899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|||.||-.+.++-.-+..+++.++..+++|++.||.|||++ +|||||+|+.|||++-+|.++|+|||.+.... ...
T Consensus 109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~-~t~ 184 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK-STR 184 (1187)
T ss_pred eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch-hHH
Confidence 99999999999887788999999999999999999999999 99999999999999999999999999876422 233
Q ss_pred CccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.....+.|||+|||||++. ..+|++++||||||+++.||..+.+|-..... +...++- ... ++
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---MRVllKi--aKS-------eP 252 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKI--AKS-------EP 252 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch---HHHHHHH--hhc-------CC
Confidence 4456789999999999874 57899999999999999999999998754332 1111111 110 11
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. --.+......+.+|+.+|+..+|..||+++++++
T Consensus 253 PT---LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 253 PT---LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred Cc---ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 11 1123344567889999999999999999999874
No 221
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.2e-34 Score=312.48 Aligned_cols=252 Identities=27% Similarity=0.428 Sum_probs=195.2
Q ss_pred ceecccCCeEEEEEEeC----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEE-ecCceEEEEec
Q 001253 815 FVIGRGACGTVYRAVLR----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCY-HQGSNLLMYEY 889 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~ 889 (1114)
+.||+|+||+||+|.+. ++..||+|++..... ....+.+.+|+.+++.++||||+++++++. .++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD--LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC--HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 36899999999999864 245799998754322 223567888999999999999999999875 45568999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC--
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS-- 967 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~-- 967 (1114)
+.+|+|.+++.......++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 999999999986666678888899999999999999998 999999999999999999999999999975432211
Q ss_pred -CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 968 -KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTG-RAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 968 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
.......++..|+|||.+.+..++.++|||||||++|||++| .+||.... .....+....... .
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~----~~~~~~~~~~~~~---------~- 221 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD----SFDITVYLLQGRR---------L- 221 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHHhcCCC---------C-
Confidence 111233467789999999888899999999999999999995 45554322 1222222111100 0
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNR 1088 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1088 (1114)
..+......+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 222 ---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 ---LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ---CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0011123468899999999999999999999999998753
No 222
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.4e-34 Score=319.77 Aligned_cols=257 Identities=28% Similarity=0.469 Sum_probs=204.8
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ 880 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 880 (1114)
..++|+..+.||+|+||.||+|..+ ++..||+|++..... ....+++.+|+.++++++||||+++++++.++
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 3578999999999999999999864 467899999865432 23356788999999999999999999999999
Q ss_pred CceEEEEecCCCCCHHHHhccCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 001253 881 GSNLLMYEYMARGSLGELLHGAS---------------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIK 939 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~---------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 939 (1114)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|+|+. +++|||||
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~ 157 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLA 157 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccccc
Confidence 99999999999999999986321 2478888999999999999999998 99999999
Q ss_pred CCCeEECCCCCeEEeeccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCC
Q 001253 940 SNNILLDDKFEAHVGDFGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLD 1017 (1114)
Q Consensus 940 ~~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~ 1017 (1114)
|+||++++++.++|+|||.+........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred HhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999876432221 11222345678999999998899999999999999999997 888886433
Q ss_pred CCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1018 QGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
. .+..+. +..+... ..+......+.+++.+||+.||++|||+.|+++.|++
T Consensus 238 ~----~~~~~~-~~~~~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 H----EEVIYY-VRDGNVL------------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred H----HHHHHH-HhcCCCC------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 2 222222 2221110 0011123468899999999999999999999999874
No 223
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.6e-34 Score=348.48 Aligned_cols=262 Identities=19% Similarity=0.344 Sum_probs=203.0
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--C
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--G 881 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 881 (1114)
....++|++.++||+|+||+||+|++. ++..||+|++...... ......+..|+.+++.++|||||+++++|.+. .
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 344578999999999999999999976 6788999998755432 23356788899999999999999999988653 4
Q ss_pred ceEEEEecCCCCCHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCC----CCeEecCCCCCCeEECC-------
Q 001253 882 SNLLMYEYMARGSLGELLHGA---SSTLDWQTRFMIALGAAEGLSYLHHDCK----PRIFHRDIKSNNILLDD------- 947 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~ivH~Dlk~~Nill~~------- 947 (1114)
..|+||||+++|+|.+++... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 689999999999999998642 3478999999999999999999998521 25999999999999964
Q ss_pred ----------CCCeEEeeccCceecCCCCCCccccccccccccCcccccc--CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001253 948 ----------KFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSYGVVLLELLTGRAPVQP 1015 (1114)
Q Consensus 948 ----------~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~p~~~ 1015 (1114)
.+.+||+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 335899999999865422 22334579999999999864 4588999999999999999999999964
Q ss_pred CCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHH--HHHHhh
Q 001253 1016 LDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVV--LMLSES 1086 (1114)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl--~~L~~i 1086 (1114)
.. .....+.. +.... .+. .......+.++|.+||+.+|.+||++.|++ ..+..+
T Consensus 246 ~~---~~~qli~~-lk~~p--------~lp-----i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 246 AN---NFSQLISE-LKRGP--------DLP-----IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CC---cHHHHHHH-HhcCC--------CCC-----cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 33 22222222 11110 000 011234688999999999999999999998 445444
No 224
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.9e-34 Score=318.23 Aligned_cols=260 Identities=26% Similarity=0.408 Sum_probs=201.6
Q ss_pred CHHHHHHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEE
Q 001253 800 TFKDLVVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFC 877 (1114)
Q Consensus 800 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 877 (1114)
.++.+..+.++|++.+.||+|+||+||+|..+ +++.+|+|++..... ....+..|+.+++.+ +||||+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD----IDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc----hHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 34445556789999999999999999999975 688999998764322 235677899999999 699999999988
Q ss_pred E-----ecCceEEEEecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 001253 878 Y-----HQGSNLLMYEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF 949 (1114)
Q Consensus 878 ~-----~~~~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 949 (1114)
. .++..++||||+++++|.++++. ....+++..+..++.|+++|+.|||+. +++||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 4 34568999999999999998752 335688999999999999999999998 999999999999999999
Q ss_pred CeEEeeccCceecCCCCCCccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHH
Q 001253 950 EAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVT 1024 (1114)
Q Consensus 950 ~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~ 1024 (1114)
.++|+|||+++..... ........|++.|+|||++. +..++.++||||+||++|||++|+.||.........
T Consensus 162 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-- 238 (286)
T cd06638 162 GVKLVDFGVSAQLTST-RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-- 238 (286)
T ss_pred CEEEccCCceeecccC-CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--
Confidence 9999999999865422 22223456899999999875 345788999999999999999999999754321111
Q ss_pred HHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1025 WVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
....... ..... .+......+.+++.+||+.||++|||+.|+++.
T Consensus 239 --~~~~~~~-------~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 239 --FKIPRNP-------PPTLH----QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred --hhccccC-------CCccc----CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1100000 00000 011112358899999999999999999999864
No 225
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.9e-34 Score=311.77 Aligned_cols=254 Identities=26% Similarity=0.381 Sum_probs=206.3
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|++.++||+|+||.||+|... +++.+|+|++...... ..+.+.+|+.++++++||||+++++++.+.+..+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 367899999999999999999975 6789999999755432 356788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++++|.+++......+++.++..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~- 154 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT- 154 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhh-
Confidence 999999999999986656899999999999999999999998 9999999999999999999999999998765422
Q ss_pred CCccccccccccccCccccccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTM---KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
........++..|+|||.+.+. .++.++||||+|+++|||++|+.||........... .....+ ....
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~-----~~~~~~----~~~~ 225 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL-----ISKSNF----PPPK 225 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHhccC----CCcc
Confidence 1122345688899999998877 889999999999999999999999975432111111 111100 0000
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..........+.+++.+||+.+|.+|||+.+++.
T Consensus 226 ----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 ----LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ----ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0112233456889999999999999999999874
No 226
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.7e-34 Score=331.84 Aligned_cols=261 Identities=21% Similarity=0.216 Sum_probs=198.5
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
...|.+.++||+|+||.||+|.+. +++.||||... ...+.+|++++++++|+|||++++++..++..++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 346999999999999999999976 57899999632 12356799999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||++. ++|.+++......+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 99996 589998876666799999999999999999999998 99999999999999999999999999998654222
Q ss_pred C-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC---CCHHHHHHHHHhcCCcccccccc
Q 001253 967 S-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQG---GDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 967 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
. .......||+.|+|||++.+..++.++|||||||++|||++|..|+...... ......+...+.........+..
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 1 1223457999999999999999999999999999999999988765432211 11122222222211110000000
Q ss_pred ------------------cccCCCcc---cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1043 ------------------RLNLQDEK---TVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1043 ------------------~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
........ .......+.+++.+||+.||.+|||+.|+++
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 00000000 0011236788999999999999999999986
No 227
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=8.2e-34 Score=313.25 Aligned_cols=252 Identities=26% Similarity=0.365 Sum_probs=190.4
Q ss_pred ceecccCCeEEEEEEeC---CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCC
Q 001253 815 FVIGRGACGTVYRAVLR---TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMA 891 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 891 (1114)
+.||+|+||.||+|.+. ++..+|+|.+...... .....+.+|+.++++++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV--QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 35899999999999865 3467999988655432 234568889999999999999999999999999999999999
Q ss_pred CCCHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 892 RGSLGELLHGAS----STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 892 ~gsL~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
+|+|.++++... ...++..+..++.|+++|++|||+. +++||||||+||+++.++.+|++|||.++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 999999986422 2567788889999999999999998 999999999999999999999999999975432211
Q ss_pred -CccccccccccccCccccccC-------CCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccc
Q 001253 968 -KSMSAIAGSYGYIAPEYAYTM-------KVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSG 1038 (1114)
Q Consensus 968 -~~~~~~~g~~~y~aPE~~~~~-------~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1114)
.......++..|+|||++.+. .++.++||||||+++|||++ |+.||........ ....+..... .
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~----~~~~~~~~~~--~ 229 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV----LTYTVREQQL--K 229 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH----HHHHhhcccC--C
Confidence 112234578899999988642 35789999999999999996 9999965432211 1111111000 0
Q ss_pred cccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1039 MLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
...+. ........+.+++.+|| .+|++|||++||++.|+
T Consensus 230 ~~~~~------~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPR------LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCc------cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00111 01112235677899999 58999999999998875
No 228
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=9.3e-34 Score=316.82 Aligned_cols=252 Identities=24% Similarity=0.361 Sum_probs=202.2
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.+.|++.++||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 367899999999999999999976 58899999986432 23356788899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||++++++..++......+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~- 163 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT- 163 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc-
Confidence 999999999998876666789999999999999999999998 9999999999999999999999999998754321
Q ss_pred CCccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
........+++.|+|||++. ...++.++|||||||++|||++|+.||..... ........... .
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~-------~ 232 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP----MRVLLKIAKSE-------P 232 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH----HHHHHHHhcCC-------C
Confidence 22223456889999999884 34578899999999999999999999864332 11111111110 0
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+.. ..+......+.+++.+||+.+|++||++.|+++
T Consensus 233 ~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 PTL----SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ccC----CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 111223346888999999999999999999865
No 229
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.1e-33 Score=315.06 Aligned_cols=261 Identities=29% Similarity=0.431 Sum_probs=207.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe--cC
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH--QG 881 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 881 (1114)
++|+..+.||+|+||+||+|++. +++.||||++...... ...+.+.+|++.++.++||||+++++++.. +.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 56788899999999999999864 3688999999765443 345679999999999999999999999887 55
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..++||||+++++|.+++......+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+..
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 78999999999999999986666799999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCC--ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC----------CHHHHHHHH
Q 001253 962 IDMPQSK--SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGG----------DLVTWVRNF 1029 (1114)
Q Consensus 962 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~----------~~~~~~~~~ 1029 (1114)
....... ......++..|+|||...+..++.++||||||+++|||++|+.|+....... .....+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 6422111 1112345667999999988899999999999999999999999886432211 001111111
Q ss_pred HhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1030 IRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
..... + ...+......+.+++.+||+.+|++|||+.||+++|+++
T Consensus 239 ~~~~~--------~----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 239 LKEGE--------R----LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHcCC--------c----CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11110 0 011112235688999999999999999999999999886
No 230
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.6e-34 Score=313.35 Aligned_cols=253 Identities=24% Similarity=0.404 Sum_probs=202.5
Q ss_pred CCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCC---ChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREG---NNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
+|+..+.||+|+||+||+|...+|+.+|+|.+...... .....+.+.+|+..+++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47888999999999999999888999999998754322 122345688899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC-
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP- 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~- 965 (1114)
|||+++++|.+++... ..+++..+..++.|++.|++|+|+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 9999999999999743 4678999999999999999999998 9999999999999999999999999998754211
Q ss_pred ----CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 966 ----QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 966 ----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
.........|+..|+|||++.+..++.++||||+||++|+|++|+.||........ . ......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---~-~~~~~~~~~-----~ 227 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA---M-FYIGAHRGL-----M 227 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH---H-HHhhhccCC-----C
Confidence 11122345688999999999988899999999999999999999999975432111 1 110000000 0
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+||+.+|.+||++.|+++
T Consensus 228 ------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 ------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111123346789999999999999999999874
No 231
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.6e-34 Score=317.20 Aligned_cols=254 Identities=29% Similarity=0.460 Sum_probs=202.5
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|++++.||+|+||+||+|+.. +++.||+|++......... .....+|+.++++++||||+++++++.+....++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 667889999999999999987 5678999999876543222 22334599999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS 969 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 969 (1114)
+++++|.+++. ....+++..+..++.|+++||++||+. +++|+||||+||++++++.++|+|||.+.... .....
T Consensus 80 ~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~ 154 (260)
T PF00069_consen 80 CPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNEN 154 (260)
T ss_dssp ETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSE
T ss_pred ccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccccc
Confidence 99999999997 445789999999999999999999999 99999999999999999999999999998641 23334
Q ss_pred cccccccccccCccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 970 MSAIAGSYGYIAPEYAY-TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 970 ~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
.....++..|+|||++. +..++.++||||+|+++|+|++|..||..... .+............ . ... .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~-~~~~~~~~~~~~~~-~-----~~~----~ 223 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS-DDQLEIIEKILKRP-L-----PSS----S 223 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH-HHHHHHHHHHHHTH-H-----HHH----T
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-hhhhhhhhhccccc-c-----ccc----c
Confidence 45567899999999998 88899999999999999999999999975411 11111121111110 0 000 0
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.........+.+++.+||+.||++||++.++++
T Consensus 224 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000011257999999999999999999999875
No 232
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.1e-34 Score=314.44 Aligned_cols=251 Identities=26% Similarity=0.410 Sum_probs=198.5
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEec----
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQ---- 880 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~---- 880 (1114)
+++.|+..+.||+|+||+||+|..+ +++.||+|++...... ...+..|+.+++++ +||||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc----HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 4577888899999999999999976 6889999998654322 45678899999988 799999999998753
Q ss_pred --CceEEEEecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeecc
Q 001253 881 --GSNLLMYEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFG 957 (1114)
Q Consensus 881 --~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 957 (1114)
...|+||||+++++|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCC
Confidence 3578999999999999999853 34689999999999999999999998 99999999999999999999999999
Q ss_pred CceecCCCCCCccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc
Q 001253 958 LAKVIDMPQSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN 1032 (1114)
Q Consensus 958 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1032 (1114)
++...... ........|++.|+|||++. +..++.++||||+||++|||++|+.||....... .... ...
T Consensus 157 ~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~---~~~~--~~~ 230 (272)
T cd06637 157 VSAQLDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR---ALFL--IPR 230 (272)
T ss_pred Cceecccc-cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH---HHHH--Hhc
Confidence 99865322 22334567899999999986 3457889999999999999999999996433211 1111 011
Q ss_pred CCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1033 NSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. .... ........+.+++.+||+.+|.+|||+.|+++
T Consensus 231 ~~------~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NP------APRL-----KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CC------CCCC-----CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00 0000 01112346889999999999999999999875
No 233
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.1e-34 Score=324.47 Aligned_cols=264 Identities=24% Similarity=0.396 Sum_probs=208.1
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC--------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR--------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGF 876 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 876 (1114)
+...+|++.+.||+|+||.||+|++. .+..||+|++..... ....+.+.+|+.+++++ +||||++++++
T Consensus 9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT--DKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC--HHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 44467999999999999999999853 123689998864432 22356788999999999 79999999999
Q ss_pred EEecCceEEEEecCCCCCHHHHhccC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 001253 877 CYHQGSNLLMYEYMARGSLGELLHGA---------------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSN 941 (1114)
Q Consensus 877 ~~~~~~~~lv~E~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 941 (1114)
+..++..+++|||+++|+|.+++... ...+++.++..++.|++.||+|||+. +++||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 99999999999999999999998642 23578899999999999999999998 9999999999
Q ss_pred CeEECCCCCeEEeeccCceecCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 001253 942 NILLDDKFEAHVGDFGLAKVIDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQG 1019 (1114)
Q Consensus 942 Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~ 1019 (1114)
||++++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-- 241 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-- 241 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC--
Confidence 999999999999999999865422211 1122334568999999999999999999999999999998 888886432
Q ss_pred CCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCC
Q 001253 1020 GDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQG 1091 (1114)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 1091 (1114)
..+..+. +..... .+.+......+.+++.+||+.+|++||++.|+++.|+++.....
T Consensus 242 --~~~~~~~-~~~~~~------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 242 --VEELFKL-LKEGHR------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred --HHHHHHH-HHcCCC------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 2222222 111110 01111223468899999999999999999999999999975544
No 234
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.1e-33 Score=308.99 Aligned_cols=249 Identities=26% Similarity=0.406 Sum_probs=200.8
Q ss_pred ceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCC
Q 001253 815 FVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGS 894 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 894 (1114)
++||+|+||.||+|.+.+++.||+|++...... .....+..|++++++++||||+++++++.+....++||||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 369999999999999877999999998755433 335678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcc-ccc
Q 001253 895 LGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSM-SAI 973 (1114)
Q Consensus 895 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~ 973 (1114)
|.+++......+++..+..++.+++.|++|||+. +++||||+|+||+++.++.+||+|||.+........... ...
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 9999976666789999999999999999999998 999999999999999999999999999986432111111 122
Q ss_pred cccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 974 AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 974 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
.++..|+|||.+.+..++.++||||+||++|||++ |..||...... . ....+.... . ...+.
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-~----~~~~~~~~~--------~----~~~~~ 218 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-Q----TRERIESGY--------R----MPAPQ 218 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-H----HHHHHhcCC--------C----CCCCc
Confidence 34667999999988889999999999999999999 78888644321 1 111111110 0 01111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
.....+.+++.+||+.+|.+||++.|+++.|++
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 223468899999999999999999999998863
No 235
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.9e-34 Score=317.47 Aligned_cols=249 Identities=24% Similarity=0.382 Sum_probs=202.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.+|++.+.||.|+||+||+|... +++.||+|.+...... ..+.+.+|+..++.++|||++++++++...+..++||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP---KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc---hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 46899999999999999999964 7899999998654332 2456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 96 e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~- 169 (296)
T cd06655 96 EYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ- 169 (296)
T ss_pred EecCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccc-
Confidence 99999999999873 3589999999999999999999998 99999999999999999999999999987653222
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......++..|+|||.+.+..++.++|||||||++|++++|+.||....... .......... +..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~----~~~~~~~~~~-------~~~--- 235 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----ALYLIATNGT-------PEL--- 235 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhcCC-------ccc---
Confidence 22234568899999999998889999999999999999999999996543211 1111111100 000
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+......+.+++.+||..||++||++.+++.
T Consensus 236 -~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 236 -QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 111122346788999999999999999999874
No 236
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=6.5e-34 Score=319.53 Aligned_cols=265 Identities=21% Similarity=0.347 Sum_probs=201.2
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||.||+|+.+ +++.||+|.+....... ....+.+|+..++.++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC--chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 57899999999999999999976 68899999987544322 2345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++ +|.+++......+++..+..++.|+++||+|||+. +++||||||+||++++++.++|+|||++.....+.
T Consensus 84 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 158 (301)
T cd07873 84 EYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT- 158 (301)
T ss_pred ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-
Confidence 99975 99999886666789999999999999999999998 99999999999999999999999999997643222
Q ss_pred CccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC--Ccccccccc--
Q 001253 968 KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN--SLVSGMLDA-- 1042 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-- 1042 (1114)
.......+++.|+|||++.+. .++.++||||+||++|||++|+.||....... ....+....... .....+.+.
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCChhhchhhhcccc
Confidence 222334678999999988653 47889999999999999999999997543211 111111111100 000000000
Q ss_pred --cccCCC-------cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1043 --RLNLQD-------EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1043 --~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...... .........+.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 001112346789999999999999999999886
No 237
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.5e-34 Score=317.38 Aligned_cols=253 Identities=25% Similarity=0.362 Sum_probs=203.5
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|++.++||+|+||+||+|+++ +++.||+|++.... ....+.+..|++++++++||||+++++++..+...|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 467888899999999999999975 68999999986432 23356788899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++++|.+++......+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~- 156 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST- 156 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccc-
Confidence 999999999999986666899999999999999999999998 9999999999999999999999999998754322
Q ss_pred CCccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
........+++.|+|||.+. +..++.++||||+|+++|||++|+.||...... +........ ..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~-~~------ 225 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVLLKILKS-EP------ 225 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHHHHHhcC-CC------
Confidence 22223456899999999874 345778999999999999999999999754321 111111111 00
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
+.+ ..+......+.+++.+||+.+|.+||++.++++.
T Consensus 226 ~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 PTL----DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCc----CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000 0111223467889999999999999999999763
No 238
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-33 Score=327.74 Aligned_cols=263 Identities=22% Similarity=0.269 Sum_probs=201.0
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC---CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR---TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
+...+|++.++||+|+||+||+|... .++.||+|.+.... ...+|+.+++.++||||+++++++.....
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKST 160 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCCE
Confidence 34568999999999999999999854 45789999875432 24579999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
.|+|||++. ++|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||+++..
T Consensus 161 ~~lv~e~~~-~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EEEEehhcC-CCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 999999996 58888884 456789999999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHh---cCCcc--
Q 001253 963 DMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIR---NNSLV-- 1036 (1114)
Q Consensus 963 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~-- 1036 (1114)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ..++..++ .....
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSS-SQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcH-HHHHHHHHHhccCccccC
Confidence 43222 2223467999999999999999999999999999999999999999765433211 11111111 00000
Q ss_pred c--------cc--ccccccCCCccc-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1037 S--------GM--LDARLNLQDEKT-----VSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1037 ~--------~~--~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
. .. ...........+ ......+.+++.+|++.||++|||+.|++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 00 000000000000 0112457789999999999999999998865
No 239
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.8e-34 Score=318.32 Aligned_cols=249 Identities=25% Similarity=0.360 Sum_probs=202.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.+|++.+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 67999999999999999999964 7899999998754432 2456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++.. ..+++.++..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||.+.......
T Consensus 96 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~- 169 (297)
T cd06656 96 EYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 169 (297)
T ss_pred cccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc-
Confidence 99999999999863 4578999999999999999999998 99999999999999999999999999998653222
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......+++.|+|||...+..++.++||||+||++|++++|+.||............ .. .....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~----~~---------~~~~~-- 234 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI----AT---------NGTPE-- 234 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee----cc---------CCCCC--
Confidence 2223456889999999999888999999999999999999999999654321111000 00 00000
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+||+.+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 235 LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0112223345788999999999999999999987
No 240
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.5e-33 Score=312.58 Aligned_cols=267 Identities=22% Similarity=0.357 Sum_probs=203.2
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..+.||+|+||.||+|+++ +|+.||+|++...... ....+.+.+|+.++++++|||++++++++..+...++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 46888999999999999999987 6899999998754332 223456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||++++++..+... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 80 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 80 EYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred eccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99999888887763 44689999999999999999999998 999999999999999999999999999987643221
Q ss_pred CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH----------HhcCCcc
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNF----------IRNNSLV 1036 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~----------~~~~~~~ 1036 (1114)
......++..|+|||++.+ ..++.++||||+|+++|||++|+.||......+......+.. .....+.
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 2234467889999999875 557899999999999999999999997544322211111100 0001111
Q ss_pred cccccccccCCCc---ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGMLDARLNLQDE---KTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.....+....... ........+.+++.+||+.+|++||++.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 1110111000000 00112356889999999999999999999874
No 241
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.9e-34 Score=313.57 Aligned_cols=252 Identities=25% Similarity=0.388 Sum_probs=199.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||.||+|+.. +++.||+|+++..... ....+.+|+.+++.++||||+++++++..++..++||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE---DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 56788889999999999999975 6889999998654322 2345778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++.. ...+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+...... .
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~ 160 (267)
T cd06645 86 EFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-I 160 (267)
T ss_pred eccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc-c
Confidence 99999999999874 34789999999999999999999998 9999999999999999999999999998765422 2
Q ss_pred CccccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
.......|++.|+|||++. ...++.++||||+||++|||++|+.||............ .. .... ....
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~----~~-~~~~----~~~~ 231 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM----TK-SNFQ----PPKL 231 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh----hc-cCCC----CCcc
Confidence 2233457899999999874 455888999999999999999999998654322211111 01 1100 0000
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
. ........+.+++.+|++.+|++||+++++++
T Consensus 232 ~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 K----DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred c----ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0 01112235788999999999999999999875
No 242
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.6e-33 Score=310.62 Aligned_cols=251 Identities=27% Similarity=0.400 Sum_probs=201.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCCh------hhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNN------NVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
+|.+...||+|++|.||+|... +++.||+|.+........ ...+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677889999999999999975 688999999876544322 223568889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 99999999999999999743 5688999999999999999999998 9999999999999999999999999999866
Q ss_pred CCCCC-----CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccc
Q 001253 963 DMPQS-----KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVS 1037 (1114)
Q Consensus 963 ~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1114)
..... .......|+..|+|||.+.+..++.++||||+||++|+|++|+.||...... ..+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~----- 227 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QAIFKIGEN----- 227 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HHHHHHhcc-----
Confidence 42111 1122345888999999999888999999999999999999999999754321 111111010
Q ss_pred ccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1038 GMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. ...+......+.+++.+||+.||.+||++.|+++
T Consensus 228 --~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 --AS------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred --CC------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00 1111223346889999999999999999999875
No 243
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.5e-34 Score=314.49 Aligned_cols=239 Identities=21% Similarity=0.351 Sum_probs=187.8
Q ss_pred eecccCCeEEEEEEeCC-------------------------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCce
Q 001253 816 VIGRGACGTVYRAVLRT-------------------------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNI 870 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 870 (1114)
.||+|+||.||+|.+.. +..||+|++..... .....+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCCCCCe
Confidence 59999999999998521 13588888864332 234567889999999999999
Q ss_pred eeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-
Q 001253 871 VKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF- 949 (1114)
Q Consensus 871 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~- 949 (1114)
+++++++.+....++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 9999999999999999999999999999976667889999999999999999999998 999999999999997643
Q ss_pred ------CeEEeeccCceecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHH-hCCCCCCCCCCCCC
Q 001253 950 ------EAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELL-TGRAPVQPLDQGGD 1021 (1114)
Q Consensus 950 ------~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~-tg~~p~~~~~~~~~ 1021 (1114)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||.......
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~- 229 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE- 229 (274)
T ss_pred ccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH-
Confidence 3899999988643211 22357788999998865 56889999999999999985 6899886543211
Q ss_pred HHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1022 LVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
...+ ..... .... .....+.+++.+||+.+|++|||+.++++.|+
T Consensus 230 ~~~~----~~~~~----------~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 KERF----YEKKH----------RLPE----PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHH----HHhcc----------CCCC----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1111 11100 0001 11235788999999999999999999998873
No 244
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=8.9e-34 Score=315.98 Aligned_cols=263 Identities=22% Similarity=0.317 Sum_probs=199.0
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|++.+.||+|++|+||+|+.+ +++.||+|++...... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 4788899999999999999976 7899999998754332 2234567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 889 YMARGSLGELLHGAS--STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|++ +++.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.....+.
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 998 58988886433 5789999999999999999999998 99999999999999999999999999998654322
Q ss_pred CCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccc-----
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML----- 1040 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1040 (1114)
.......+++.|+|||++.+. .++.++||||+||++|||++|+.||.............+.... .....+
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 231 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGT---PTEDVWPGVTS 231 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC---CChhhhhcchh
Confidence 222334578899999988654 4788999999999999999999999754322111111111000 000000
Q ss_pred ----cccccC-----CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1041 ----DARLNL-----QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1041 ----~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...... ..........++.+++.+||+.||.+|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 00001112346779999999999999999999875
No 245
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.4e-33 Score=317.53 Aligned_cols=195 Identities=24% Similarity=0.421 Sum_probs=161.2
Q ss_pred CceecccCCeEEEEEEeC---CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe--cCceEEEEe
Q 001253 814 RFVIGRGACGTVYRAVLR---TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH--QGSNLLMYE 888 (1114)
Q Consensus 814 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E 888 (1114)
.++||+|+||+||+|+.+ +++.||+|++..... ...+.+|+.++++++||||+++++++.. +...++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 358999999999999965 467899999865432 3346789999999999999999999864 456789999
Q ss_pred cCCCCCHHHHhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE----CCCCCeEEeec
Q 001253 889 YMARGSLGELLHGA--------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILL----DDKFEAHVGDF 956 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~Df 956 (1114)
|+++ ++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9975 888877521 23588999999999999999999998 99999999999999 46678999999
Q ss_pred cCceecCCCCC--CccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCC
Q 001253 957 GLAKVIDMPQS--KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLD 1017 (1114)
Q Consensus 957 G~a~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~ 1017 (1114)
|+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|++||....
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 99987643221 223456789999999998764 58899999999999999999999996443
No 246
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.5e-33 Score=309.82 Aligned_cols=248 Identities=29% Similarity=0.459 Sum_probs=203.7
Q ss_pred ceecccCCeEEEEEEeCC----CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecC
Q 001253 815 FVIGRGACGTVYRAVLRT----GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
++||+|+||.||+|.... +..||+|++....... ..+.+.+|++.++.++|+|++++++++..+...++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 369999999999999763 7899999997655433 3567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 891 ARGSLGELLHGA--------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 891 ~~gsL~~~l~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
++++|.++++.. ...+++..+..++.|+++|++|||+. +++||||+|+||++++++.++|+|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccc
Confidence 999999999865 46899999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 963 DMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 963 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
..... .......++..|+|||.+....++.++||||+|+++|||++ |..||..... ...... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~-~~~~~~----- 225 (262)
T cd00192 156 YDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN----EEVLEY-LRKGYR----- 225 (262)
T ss_pred ccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH----HHHHHH-HHcCCC-----
Confidence 43221 22334567889999999988889999999999999999999 6899875521 122222 221110
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
...+......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 226 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 -------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111222457889999999999999999999998874
No 247
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.1e-33 Score=321.48 Aligned_cols=265 Identities=20% Similarity=0.220 Sum_probs=196.0
Q ss_pred CCceeccc--CCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 813 ERFVIGRG--ACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 813 ~~~~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
+.++||+| +|++||+++.+ +|+.||+|++...... ....+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 35679999 68899999975 7899999998765432 23355678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-
Q 001253 890 MARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS- 967 (1114)
Q Consensus 890 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~- 967 (1114)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 9999999999643 34689999999999999999999998 999999999999999999999999986543211110
Q ss_pred -----CccccccccccccCcccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc--------
Q 001253 968 -----KSMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN-------- 1032 (1114)
Q Consensus 968 -----~~~~~~~g~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 1032 (1114)
.......++..|+|||++.+ ..++.++||||+||++|||++|+.||...................
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 01122356778999999876 458899999999999999999999997543322111111100000
Q ss_pred -CC-------------cccccc-cccc-----cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1033 -NS-------------LVSGML-DARL-----NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1033 -~~-------------~~~~~~-~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. ...... .... .............+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00 000000 0000 0000011123457889999999999999999999986
No 248
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.4e-33 Score=311.62 Aligned_cols=247 Identities=28% Similarity=0.490 Sum_probs=194.2
Q ss_pred eecccCCeEEEEEEeC-CCc--EEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEecCC
Q 001253 816 VIGRGACGTVYRAVLR-TGH--TVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYEYMA 891 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~ 891 (1114)
.||+|+||.||+|+++ ++. .+|+|.++.... ....+.+..|+.++.++ +||||+++++++...+..++||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC--HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 5899999999999976 343 468888764322 23345788899999999 79999999999999999999999999
Q ss_pred CCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeec
Q 001253 892 RGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDF 956 (1114)
Q Consensus 892 ~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 956 (1114)
+|+|.++++... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCC
Confidence 999999986432 2478999999999999999999998 9999999999999999999999999
Q ss_pred cCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCc
Q 001253 957 GLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSL 1035 (1114)
Q Consensus 957 G~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1114)
|++..... .........+..|+|||++....++.++|||||||++|||++ |..||..... ....+.. ....
T Consensus 157 gl~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~----~~~~~~~-~~~~- 228 (270)
T cd05047 157 GLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----AELYEKL-PQGY- 228 (270)
T ss_pred CCccccch--hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH----HHHHHHH-hCCC-
Confidence 99863221 111111234567999999988889999999999999999997 9999864332 1222221 1110
Q ss_pred ccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1036 VSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.. +.+......+.+++.+||+.+|.+|||+.|+++.|+++
T Consensus 229 -------~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 229 -------RL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred -------CC----CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 00 01111234678999999999999999999999999876
No 249
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.2e-33 Score=307.51 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=205.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..+.||+|+||.||.++.. +++.+|+|.+....... ...+++.+|+.++++++|+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 5888999999999999999965 68999999986544322 335668899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+++++|.+++... ...+++.++..++.|+++|++|||+. +++||||+|+||++++++.+||+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999999754 45689999999999999999999998 999999999999999999999999999987643332
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
......+++.|+|||...+..++.++||||+|+++|||++|+.||.... ..+....... +.. .
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~----~~~~~~~~~~-~~~---------~-- 219 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN----PLNLVVKIVQ-GNY---------T-- 219 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHc-CCC---------C--
Confidence 2344568999999999998889999999999999999999999986432 2222222211 111 0
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
.........+.+++.+||+.+|.+||++.++++.
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 220 -PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0111223468889999999999999999999874
No 250
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.4e-33 Score=309.27 Aligned_cols=256 Identities=27% Similarity=0.412 Sum_probs=205.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||.|+||+||+|... ++..+|+|++....... ..+.+.+|+..++.++|+|++++++.+..+...++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 46889999999999999999965 68899999986544332 3567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 888 EYMARGSLGELLHGA--SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||+++++|.++++.. ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 999999999999743 24689999999999999999999998 9999999999999999999999999998765433
Q ss_pred CCC---ccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 966 QSK---SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 966 ~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
... ......|+..|+|||++... .++.++|||||||++|||++|+.||..........+.. ... .
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~----~~~-------~ 224 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL----QND-------P 224 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh----cCC-------C
Confidence 222 22345689999999998776 78999999999999999999999997544322222211 111 0
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+.. ..........+.+++.+||+.||++||++.++++
T Consensus 225 ~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 225 PSLET-GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCcCC-ccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11110 0001123456789999999999999999999875
No 251
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-33 Score=309.69 Aligned_cols=249 Identities=27% Similarity=0.444 Sum_probs=200.3
Q ss_pred ceecccCCeEEEEEEeCC--C--cEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecC
Q 001253 815 FVIGRGACGTVYRAVLRT--G--HTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
++||+|++|+||+|.+.+ + ..||+|++...... ...+.+..|+..+++++||||+++++++.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 368999999999999753 3 36999998765543 446778999999999999999999999988 8889999999
Q ss_pred CCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC-
Q 001253 891 ARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK- 968 (1114)
Q Consensus 891 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~- 968 (1114)
++++|.+++.... ..+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 9999999997654 5789999999999999999999998 9999999999999999999999999999876432211
Q ss_pred -ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 969 -SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 969 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
......++..|+|||++.+..++.++||||+||++|||++ |+.||..... .+..+........ .
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~~~~~~~~~--------~-- 220 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG----SQILKKIDKEGER--------L-- 220 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHhcCCc--------C--
Confidence 1123457788999999998899999999999999999998 9999864322 2222222111100 0
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
..+......+.+++.+|++.+|++||++.++++.|.+
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 221 --ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred --CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 0111223468899999999999999999999998863
No 252
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=7.9e-34 Score=316.21 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=200.3
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..+.||+|+||+||+|+++ +|+.||+|++...... +.....+.+|+.++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc-ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 4788899999999999999976 7899999998754322 2223457789999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++ ++.+++......+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++...... .
T Consensus 80 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~ 154 (284)
T cd07839 80 YCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-R 154 (284)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-C
Confidence 9975 88888875566799999999999999999999998 99999999999999999999999999998654322 2
Q ss_pred ccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc-----cccccc-
Q 001253 969 SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL-----VSGMLD- 1041 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~- 1041 (1114)
......++..|+|||++.+. .++.++||||+||++|||++|+.|+..........+.+......... .....+
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 22344678899999988764 47899999999999999999998875433322222211111110000 000000
Q ss_pred ccccCCC------cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQD------EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....... .........+.+++.+||+.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000000 001122356789999999999999999999875
No 253
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6.2e-34 Score=338.58 Aligned_cols=263 Identities=19% Similarity=0.231 Sum_probs=191.9
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC------CCceeeEEeEE
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR------HRNIVKLYGFC 877 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~ 877 (1114)
....++|++.++||+|+||+||+|.+. +++.||||+++.... ..+.+..|+.+++.++ |.+++++++++
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK----YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh----hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 345688999999999999999999975 678999999864322 1334455666666654 45689999988
Q ss_pred Eec-CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEECCCC------
Q 001253 878 YHQ-GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHH-DCKPRIFHRDIKSNNILLDDKF------ 949 (1114)
Q Consensus 878 ~~~-~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~------ 949 (1114)
... +..|+|||++ +++|.+++.+. ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccc
Confidence 764 4678999988 66888888643 578999999999999999999997 5 899999999999998765
Q ss_pred ----------CeEEeeccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC
Q 001253 950 ----------EAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQG 1019 (1114)
Q Consensus 950 ----------~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~ 1019 (1114)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred cccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 49999999886422 2234568999999999999999999999999999999999999999754432
Q ss_pred CCHHHHHHHHHhcCC----------cccccccccccC---------------CCcccHHHHHHHHHHHhhccCCCCCCCC
Q 001253 1020 GDLVTWVRNFIRNNS----------LVSGMLDARLNL---------------QDEKTVSHMITVLKIAMLCTNISPFDRP 1074 (1114)
Q Consensus 1020 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~cl~~dP~~RP 1074 (1114)
+.+ ..+......-. ....+++..... ...........+.+++.+||++||++||
T Consensus 352 ~~~-~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 352 EHL-HLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred HHH-HHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 111 11111100000 000000000000 0000011234577999999999999999
Q ss_pred CHHHHHH
Q 001253 1075 TMREVVL 1081 (1114)
Q Consensus 1075 s~~evl~ 1081 (1114)
|++|+++
T Consensus 431 ta~e~L~ 437 (467)
T PTZ00284 431 NARQMTT 437 (467)
T ss_pred CHHHHhc
Confidence 9999986
No 254
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.6e-33 Score=307.10 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=201.6
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec-CceEEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ-GSNLLMY 887 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 887 (1114)
+|++.+.||+|++|.||++..+ +++.||+|++...... ....+.+..|+.++++++|+|++++++.+... ...++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 4788899999999999999976 6789999998654332 22355688899999999999999999987644 4578999
Q ss_pred ecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||+++++|.+++... ...+++.++..++.+++.|++|+|+. +++||||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999999753 34689999999999999999999998 99999999999999999999999999998764322
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
.......+++.|+|||+..+..++.++||||+|+++|++++|+.||...+ .......... +..
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~----~~~~~~~~~~-~~~----------- 219 (257)
T cd08223 157 -DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD----MNSLVYRIIE-GKL----------- 219 (257)
T ss_pred -CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHh-cCC-----------
Confidence 22344568899999999999999999999999999999999999986432 2222222111 110
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+|++.+|++||++.++++
T Consensus 220 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 220 -PPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -CCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0111223356889999999999999999999875
No 255
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.4e-33 Score=315.02 Aligned_cols=261 Identities=25% Similarity=0.438 Sum_probs=205.8
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCc----EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGH----TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 881 (1114)
..++|+..+.||+|+||.||+|.+. +|+ .||+|.+..... .....++.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 3467888999999999999999964 444 578888764432 22344688899999999999999999998654
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..++++||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 56799999999999999986666789999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 962 IDMPQSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 962 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
....... ......++..|+|||++.+..++.++|||||||++||+++ |+.||..... ....+.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~~---- 229 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-----REIPDLLEKGER---- 229 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHCCCC----
Confidence 5422211 1223345778999999998899999999999999999997 8899864321 112222222111
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccC
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQ 1090 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1090 (1114)
.. .+......+.+++.+||..+|++||+++++++.++++....
T Consensus 230 ----~~----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 230 ----LP----QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred ----CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 00 01112346788999999999999999999999999985543
No 256
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-33 Score=311.05 Aligned_cols=249 Identities=29% Similarity=0.425 Sum_probs=203.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..+.||.|++|.||+|++. +++.||+|++..... ......+.+|+.+++.++|+|++++++++.++...++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 36888889999999999999976 689999999875432 223456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.++......
T Consensus 79 e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM- 152 (274)
T ss_pred EeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence 999999999999743 789999999999999999999998 99999999999999999999999999998765332
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......+++.|+|||+..+..++.++||||||+++|+|++|+.||...... ..... +.... .+...
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~----~~~~~-~~~~~------~~~~~-- 219 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM----RVLFL-IPKNN------PPSLE-- 219 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH----HHHHH-hhhcC------CCCCc--
Confidence 2233456888999999999888999999999999999999999999654321 11111 11110 00000
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. .....+.+++.+||..+|++|||++++++
T Consensus 220 -~~--~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 -GN--KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -cc--ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00 02346788999999999999999999976
No 257
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.9e-33 Score=311.50 Aligned_cols=256 Identities=26% Similarity=0.453 Sum_probs=204.2
Q ss_pred cCCcCCceecccCCeEEEEEEeC------CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR------TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
++|+..+.||+|+||+||+|+.+ +.+.||+|.+..... ....+.+..|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 67889999999999999999964 246799998754332 2245678999999999999999999999999899
Q ss_pred eEEEEecCCCCCHHHHhccCC--------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEe
Q 001253 883 NLLMYEYMARGSLGELLHGAS--------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVG 954 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 954 (1114)
.++||||+++|+|.++++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 999999999999999997433 1589999999999999999999998 99999999999999999999999
Q ss_pred eccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 955 DFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 955 DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
|||++...............++..|+|||.+.+..++.++||||+|+++|++++ |..||...... ..+.. ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~----~~~~~-~~~~ 234 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE----EVLNR-LQAG 234 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH----HHHHH-HHcC
Confidence 999987543223333344467788999999988888999999999999999999 78888643321 11111 1111
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
... .. ........+.+++.+||+.+|++||++.|+++.|++
T Consensus 235 ~~~-------~~----~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 235 KLE-------LP----VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CcC-------CC----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 100 00 011122468899999999999999999999998863
No 258
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=285.44 Aligned_cols=250 Identities=24% Similarity=0.386 Sum_probs=198.8
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEe
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.+.+..||.|.-|+||+++.+ +|...|||.+.+... .+..+++...+.++... ++|+||+.+|||..+...++.||
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 344556999999999999977 689999999976543 23345566667665544 58999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
.|.- ..+.+++.-.+.+++..+-++...+++||.||.+++ +|+|||+||+|||+|+.|.+|+||||++..+- .+.
T Consensus 172 lMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlv--dSk 246 (391)
T KOG0983|consen 172 LMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLV--DSK 246 (391)
T ss_pred HHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceee--ccc
Confidence 9965 777787766778999999999999999999998764 99999999999999999999999999998764 334
Q ss_pred ccccccccccccCcccccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 969 SMSAIAGSYGYIAPEYAYT---MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~---~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
..+..+|-+.|||||.+.- ..|+.++||||||++++|+.||+.||...+...+....+ ..+. .+.+.
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkv---ln~e-------PP~L~ 316 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKV---LNEE-------PPLLP 316 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHH---HhcC-------CCCCC
Confidence 4455678999999999863 468899999999999999999999998755433322222 2211 11111
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
........+.+++..|++.|+.+||.+.++++
T Consensus 317 ----~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 317 ----GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ----cccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 11124567899999999999999999998875
No 259
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.8e-34 Score=326.63 Aligned_cols=243 Identities=24% Similarity=0.243 Sum_probs=187.4
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC---CCCceeeEEeEEEecCceEEEEecCCC
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI---RHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
||+|+||+||+|+.+ +++.||+|++.............+..|..++... +||+|+++++++......|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999976 6899999999654332222233344566666554 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.... .......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~-~~~~~~~ 155 (330)
T cd05586 81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLT-DNKTTNT 155 (330)
T ss_pred ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCC-CCCCccC
Confidence 999999874 45789999999999999999999998 999999999999999999999999999875322 2223345
Q ss_pred ccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCccc
Q 001253 973 IAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKT 1051 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1114)
.+||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+..+.. ..+.. ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~----~~~~~~~i-~~~~~---------~~~~--- 218 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED----TQQMYRNI-AFGKV---------RFPK--- 218 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC----HHHHHHHH-HcCCC---------CCCC---
Confidence 6799999999998754 48899999999999999999999996432 22222221 11110 0000
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 001253 1052 VSHMITVLKIAMLCTNISPFDRPT----MREVVL 1081 (1114)
Q Consensus 1052 ~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 1081 (1114)
......+.+++.+||+.||.+||+ +.|+++
T Consensus 219 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 012335778999999999999985 555543
No 260
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.3e-33 Score=313.51 Aligned_cols=259 Identities=29% Similarity=0.430 Sum_probs=201.6
Q ss_pred CHHHHHHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEE
Q 001253 800 TFKDLVVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFC 877 (1114)
Q Consensus 800 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 877 (1114)
+..++..+.++|++.+.||+|+||.||+|..+ +++.+|+|++..... ....+.+|+.+++++ +|||++++++++
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD----VDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc----HHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 33444456788999999999999999999975 688999999864322 245577899999988 899999999998
Q ss_pred Eec-----CceEEEEecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 001253 878 YHQ-----GSNLLMYEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF 949 (1114)
Q Consensus 878 ~~~-----~~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 949 (1114)
... +..++||||+++++|.++++. ....+++..+..++.|++.||+|||+. +++||||||+||++++++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 754 357999999999999998863 345789999999999999999999998 999999999999999999
Q ss_pred CeEEeeccCceecCCCCCCccccccccccccCccccccC-----CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHH
Q 001253 950 EAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTM-----KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVT 1024 (1114)
Q Consensus 950 ~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~ 1024 (1114)
.+||+|||.+....... .......|+..|+|||++... .++.++||||+||++|||++|+.||.........
T Consensus 166 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~-- 242 (291)
T cd06639 166 GVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL-- 242 (291)
T ss_pred CEEEeecccchhccccc-ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHH--
Confidence 99999999988654222 122334688999999987543 3678999999999999999999999754322111
Q ss_pred HHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1025 WVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....+. .. ... ..+......+.+++.+||+.+|++||++.|+++
T Consensus 243 --~~~~~~-~~------~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 243 --FKIPRN-PP------PTL----LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred --HHHhcC-CC------CCC----CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111 00 000 011122346889999999999999999999875
No 261
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=298.18 Aligned_cols=245 Identities=24% Similarity=0.270 Sum_probs=204.4
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
.-++|+..++||+|.||+|-.++.+ +|+.||+|++++...-..+....-..|-++++..+||.+..+.-.|+..++.|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 4478899999999999999999976 799999999998876554445556678899999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||..||.|.-++.+ ...+++......-..|+.||.|||++ +||+||+|.+|.|+|.||++||+|||+++.- ..
T Consensus 246 VMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~-I~ 320 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE-IK 320 (516)
T ss_pred EEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc-cc
Confidence 9999999999999974 45677777777888999999999998 9999999999999999999999999999853 34
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
......+++|||.|.|||++....|+.++|.|.+||++|||++|+.||...+... +.+. +....++
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k-LFeL-------------Il~ed~k 386 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK-LFEL-------------ILMEDLK 386 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH-HHHH-------------HHhhhcc
Confidence 5566788999999999999999999999999999999999999999998655422 1111 1111122
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCC
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRP 1074 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1074 (1114)
++.....+...++...+..||.+|.
T Consensus 387 ----FPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 387 ----FPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ----CCccCCHHHHHHHHHHhhcChHhhc
Confidence 2222334566778889999999995
No 262
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-34 Score=342.46 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=215.4
Q ss_pred HHHHhcCCcCCceecccCCeEEEEEEeC----C----CcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEE
Q 001253 804 LVVATDNFDERFVIGRGACGTVYRAVLR----T----GHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLY 874 (1114)
Q Consensus 804 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 874 (1114)
+++..++..+.+.+|+|+||.||+|..+ . ...||||.++..... ...+.+..|+++++.+ +||||+.++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 3445566667779999999999999843 1 357999999876654 3467899999999999 699999999
Q ss_pred eEEEecCceEEEEecCCCCCHHHHhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 001253 875 GFCYHQGSNLLMYEYMARGSLGELLHGAS---------------STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIK 939 (1114)
Q Consensus 875 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 939 (1114)
|+|..++..++|+||+..|+|.++++..+ ..++..+...++.|||.||+||++. ++||||+.
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLA 445 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLA 445 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhh
Confidence 99999999999999999999999998666 3489999999999999999999999 99999999
Q ss_pred CCCeEECCCCCeEEeeccCceecCCCCCCcccccc--ccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCC
Q 001253 940 SNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIA--GSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPL 1016 (1114)
Q Consensus 940 ~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~--g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~ 1016 (1114)
++|||+.++..+||+|||+|+.............. -+..|||||.+....|+.++|||||||++||++| |..||+..
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 99999999999999999999965443333322222 3567999999999999999999999999999999 88999864
Q ss_pred CCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1017 DQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
....++.+++++ +.- .+.+..+..+++++|+.||+.+|++||++.|+++.++..
T Consensus 526 ~~~~~l~~~l~~----G~r------------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 526 PPTEELLEFLKE----GNR------------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CcHHHHHHHHhc----CCC------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 433444333332 211 122333456789999999999999999999999999995
No 263
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.1e-33 Score=309.05 Aligned_cols=249 Identities=26% Similarity=0.380 Sum_probs=203.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
..|+..++||+|+||.||+|.++ +++.||+|++..... ......+.+|+.++++++||||+++++++.++...++||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45777889999999999999976 688999999875432 233567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++|+|.+++.. ..+++.+...++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 82 e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06640 82 EYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred ecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc-
Confidence 99999999999873 4688899999999999999999998 99999999999999999999999999997654222
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......++..|+|||++.+..++.++|||||||++|||++|..||....... ... ..... ..
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~~-~~~~~------------~~ 218 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR----VLF-LIPKN------------NP 218 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh----Hhh-hhhcC------------CC
Confidence 22233468889999999998889999999999999999999999987543211 111 01100 01
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..........+.+++.+||+.+|++||++.++++.
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 12223445678899999999999999999999765
No 264
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.3e-33 Score=307.26 Aligned_cols=250 Identities=22% Similarity=0.336 Sum_probs=204.2
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|++.+.||+|+||+||+++.+ +|+.||+|++....... ...+++.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 5888899999999999999975 68999999987543322 234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+++++|.+++.... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV- 155 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-
Confidence 999999999987533 3678999999999999999999998 99999999999999999999999999998654322
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......|++.|+|||+..+..++.++|||||||++|+|++|+.||.... ....+....... .
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~----~~~~~~~~~~~~-~------------ 218 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN----MKNLVLKIIRGS-Y------------ 218 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC----HHHHHHHHhcCC-C------------
Confidence 12223468889999999998889999999999999999999999986432 222332222211 0
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+||+.+|.+||++.+|++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 219 PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0111223446889999999999999999999986
No 265
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=306.68 Aligned_cols=270 Identities=25% Similarity=0.274 Sum_probs=214.3
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.+.|+.-++||+|+||.||-++.+ +|+-||.|++.+.+........-...|-.++.++..+.||.+--+|+..+..|+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 466888899999999999999976 7999999988766544333344556789999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 887 YEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
+..|.||+|.-++...+ ..++++.+...+.+|+.||++||+. +||+||+||+|||+|+.|+|+|+|.|+|..+.
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~-- 338 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP-- 338 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC--
Confidence 99999999999887544 4789999999999999999999999 99999999999999999999999999999865
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
........+||.+|||||++.+..|+...|.||+||++|||+.|+.||.......... .+...+..
T Consensus 339 ~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~e-Evdrr~~~------------- 404 (591)
T KOG0986|consen 339 EGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKRE-EVDRRTLE------------- 404 (591)
T ss_pred CCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHH-HHHHHHhc-------------
Confidence 4444555699999999999999999999999999999999999999997544322111 12221111
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCCC
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDHD 1101 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~ 1101 (1114)
...+.+...+.+..++.+..++.||++|...+.- .......+.++..++|.
T Consensus 405 ~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~-----ga~evk~HpfFk~lnw~ 455 (591)
T KOG0986|consen 405 DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGE-----GAQEVKEHPFFKDLNWR 455 (591)
T ss_pred chhhcccccCHHHHHHHHHHHccCHHHhccCCCc-----CcchhhhCcccccCCHh
Confidence 1122333445567888889999999999766531 33333344455555554
No 266
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.4e-34 Score=313.19 Aligned_cols=239 Identities=20% Similarity=0.386 Sum_probs=188.8
Q ss_pred eecccCCeEEEEEEeCC--------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 816 VIGRGACGTVYRAVLRT--------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.||+|+||+||+|..+. ...||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 69999999999998642 2348888875432 223456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC--------eEEeeccCc
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE--------AHVGDFGLA 959 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--------~kl~DfG~a 959 (1114)
||+++|+|.++++.....+++..+..++.|++.|++|||+. +|+||||||+||+++.++. ++++|||.+
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 99999999999987666789999999999999999999998 9999999999999987765 699999988
Q ss_pred eecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCC-CCCCCCCCCCCHHHHHHHHHhcCCccc
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGR-APVQPLDQGGDLVTWVRNFIRNNSLVS 1037 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1114)
..... .....++..|+|||++.+ ..++.++|||||||++|||++|. .|+..... .... ......
T Consensus 156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~----~~~~-~~~~~~---- 221 (258)
T cd05078 156 ITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS----QKKL-QFYEDR---- 221 (258)
T ss_pred cccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH----HHHH-HHHHcc----
Confidence 75431 223467889999999886 45789999999999999999985 55543221 1111 111110
Q ss_pred ccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1038 GMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
. ..+.....++.+++.+||+.||++|||++++++.|+
T Consensus 222 ------~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 ------H----QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ------c----cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 011112246889999999999999999999998863
No 267
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.5e-33 Score=312.56 Aligned_cols=266 Identities=26% Similarity=0.317 Sum_probs=204.0
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|++.+.||+|+||.||+|++. +|+.||+|++...... ......+.+|+.++++++|||++++++++..+...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 4788899999999999999975 7899999998765432 2334678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+ +++|.+++......+++.++..++.|+++||+|||+. +++|+||||+||+++.++.++++|||.+.........
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 99 9999999976667899999999999999999999998 9999999999999999999999999999876543322
Q ss_pred ccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc--------cccc
Q 001253 969 SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL--------VSGM 1039 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 1039 (1114)
......|+..|+|||++.+. .++.++||||+|+++|||++|.+||........ ...+......... ....
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ-LAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH-HHHHHHHcCCCChHHHhhccCcchh
Confidence 33445789999999988654 468899999999999999999877754332111 1111111110000 0000
Q ss_pred ccccccCCC-----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1040 LDARLNLQD-----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1040 ~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
......... ....+....+.+++.+|++.+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 001122367889999999999999999999875
No 268
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.4e-33 Score=312.22 Aligned_cols=266 Identities=21% Similarity=0.347 Sum_probs=199.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|++|+||+|..+ +++.||+|.+....... ....+.+|+.+++.++||||+++++++.+++..++||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 67889999999999999999976 68999999987544322 1234667999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++ +|.+++......+++.....++.|+++||.|||+. +++||||||+||++++++.+||+|||.++....+.
T Consensus 83 e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~- 157 (291)
T cd07844 83 EYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS- 157 (291)
T ss_pred ecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC-
Confidence 99985 99999886666889999999999999999999998 99999999999999999999999999987543222
Q ss_pred CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC---Cccc-----c
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN---SLVS-----G 1038 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~-----~ 1038 (1114)
.......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.......+....+.+..... .+.. .
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 12223356889999998875 4578999999999999999999999965432111111111111000 0000 0
Q ss_pred cccccccCCCcc-------cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1039 MLDARLNLQDEK-------TVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1039 ~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
............ .......+.+++.+|++++|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000000000 0111146788999999999999999999874
No 269
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5e-33 Score=306.46 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=197.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCC--ChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--Cce
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREG--NNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSN 883 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 883 (1114)
.+|+..+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999975 6899999998754322 222345688899999999999999999998753 567
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
+++|||+++++|.+++... ..+++.....++.|++.||+|||+. +++||||+|+||+++.++.++|+|||+++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 8999999999999999743 3588999999999999999999998 99999999999999999999999999997653
Q ss_pred CCC--CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 964 MPQ--SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 964 ~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
... ........++..|+|||.+.+..++.++||||+||++||+++|+.||..... ...+........ .
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~~~~~~~------~ 227 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPT------N 227 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHHHhcCCC------C
Confidence 211 1112234588899999999988899999999999999999999999975432 122222111100 0
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++ +||..+|++||+++|+++
T Consensus 228 ------~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 228 ------PQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ------CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 111222233456666 788899999999999864
No 270
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2e-33 Score=316.13 Aligned_cols=258 Identities=22% Similarity=0.260 Sum_probs=203.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||.||+|..+ +++.||+|.+...........+.+.+|+.+++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999976 67899999987654333333556788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++... ..+++..+..++.|++.|++|+|+. +++||||||+||+++.++.++++|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 999999999999744 4689999999999999999999998 999999999999999999999999999874211100
Q ss_pred --------------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 968 --------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 968 --------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
.......++..|+|||.+.+..++.++|||||||++||+++|..||..... .+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~----~~~~~~~~~~- 231 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP----EELFGQVISD- 231 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhc-
Confidence 011224578899999999888899999999999999999999999964321 2222221111
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
... .+ .........+.+++.+||+.||++||++.++.+.++.
T Consensus 232 ~~~----~~------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 232 DIE----WP------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ccC----CC------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 000 00 0001223467899999999999999997766666655
No 271
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-33 Score=311.24 Aligned_cols=259 Identities=24% Similarity=0.382 Sum_probs=206.7
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|++.++||+|+||+||+|... +|+.||+|++..... ....+.+.+|+++++.++||||+++++++......++|
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK--SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc--chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 357888899999999999999976 688999998865432 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++++|.+++.. .+.+++..+..++.+++.|+.|||+.. +++||||+|+||++++++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 82 MEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 999999999999874 346899999999999999999999731 8999999999999999999999999998754221
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCC-------HHHHHHHHHhcCCccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGD-------LVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 1039 (1114)
......|+..|+|||++.+..++.++|||||||++|++++|+.||.......+ ...++.......
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 229 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------ 229 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------
Confidence 12245789999999999888899999999999999999999999975443211 112222222110
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.+.+ ........+.+++.+|++.||++|||+.|+++...-+
T Consensus 230 -~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 230 -PPRL-----PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred -CCCC-----CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 0000 0111334688999999999999999999999864333
No 272
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.4e-33 Score=308.93 Aligned_cols=256 Identities=29% Similarity=0.448 Sum_probs=199.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCC-------hhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGN-------NNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 881 (1114)
+|...+.||+|+||.||+|... +|+.||+|.++...... ....+.+..|+.+++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999865 68999999886432211 112346788999999999999999999999999
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..++||||+++++|.++++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||+++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 999999999999999999754 5789999999999999999999998 999999999999999999999999999976
Q ss_pred cCCCCC-CccccccccccccCccccccCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccc
Q 001253 962 IDMPQS-KSMSAIAGSYGYIAPEYAYTMK--VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSG 1038 (1114)
Q Consensus 962 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~--~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1114)
...... .......|+..|+|||...... ++.++||||+|+++||+++|..||..... . ....+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~-~~~~~~~~~~~---- 229 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA---I-AAMFKLGNKRS---- 229 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch---H-HHHHHhhcccc----
Confidence 432211 1223456889999999987654 78999999999999999999999863322 1 11111111100
Q ss_pred cccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1039 MLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. .............+.+++.+||+.+|++||+++++++
T Consensus 230 --~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 230 --AP--PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred --CC--cCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 00 0001111223457888999999999999999999875
No 273
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.2e-33 Score=308.16 Aligned_cols=251 Identities=23% Similarity=0.364 Sum_probs=187.0
Q ss_pred eecccCCeEEEEEEeCCCc---EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 816 VIGRGACGTVYRAVLRTGH---TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~g~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
.||+|+||+||+|...++. .+++|.+..... ....+.+.+|+..++.++||||+++++.+.+....|+||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 5999999999999865433 456666554332 23356788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC-CC
Q 001253 893 GSLGELLHGAS---STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ-SK 968 (1114)
Q Consensus 893 gsL~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~-~~ 968 (1114)
|+|.++++... ...++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++....... ..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 99999997432 3466777889999999999999998 99999999999999999999999999986422111 11
Q ss_pred ccccccccccccCcccccc-------CCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 969 SMSAIAGSYGYIAPEYAYT-------MKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~-------~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
......++..|+|||+... ..++.++|||||||++|||++ |..||..... .+........... ...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~----~~~~~~~~~~~~~--~~~ 230 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD----REVLNHVIKDQQV--KLF 230 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHhhccc--ccC
Confidence 2234568899999998753 345779999999999999997 5667754332 2222222222111 011
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
++.. .......+.+++..|| .+|++||+++||++.|.
T Consensus 231 ~~~~------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQL------ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCcc------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1111 1112345777889999 57999999999998874
No 274
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.1e-33 Score=308.17 Aligned_cols=238 Identities=24% Similarity=0.440 Sum_probs=190.4
Q ss_pred ceecccCCeEEEEEEeCCCc-----------EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCce
Q 001253 815 FVIGRGACGTVYRAVLRTGH-----------TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~g~-----------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 883 (1114)
+.||+|+||.||+|.++... .|++|++...... ...+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD----SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh----HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999986322 4777776543321 5678899999999999999999999988 778
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-------CeEEeec
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF-------EAHVGDF 956 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-------~~kl~Df 956 (1114)
++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|++||
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCC
Confidence 999999999999999986655789999999999999999999998 999999999999999887 7999999
Q ss_pred cCceecCCCCCCccccccccccccCccccccC--CCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 957 GLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTM--KVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 957 G~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
|++..... .....++..|+|||++.+. .++.++||||+|+++||+++ |..||..... .....+. ...
T Consensus 153 g~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-~~~~~~~----~~~ 222 (259)
T cd05037 153 GIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-SEKERFY----QDQ 222 (259)
T ss_pred Cccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-hhHHHHH----hcC
Confidence 99986532 2234567789999998876 78999999999999999999 5777765432 1111111 110
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
. ... ......+.+++.+||+.+|.+|||+.|+++.|+
T Consensus 223 ~--------~~~------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 H--------RLP------MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C--------CCC------CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 000 001157889999999999999999999998873
No 275
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.1e-33 Score=307.23 Aligned_cols=246 Identities=28% Similarity=0.466 Sum_probs=198.5
Q ss_pred cCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
++|++.+.||+|+||.||+|.. +++.||+|++..... .+.+.+|+.++++++|||++++++++... ..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~-----~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT-----AQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcch-----HHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 5688999999999999999975 578899999864322 45688999999999999999999998754 4799999
Q ss_pred cCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+++++|.+++.... ..+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+||+|||.+......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-- 153 (254)
T ss_pred CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence 999999999997543 3689999999999999999999998 9999999999999999999999999999764321
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
......+..|+|||.+.+..++.++||||+|+++|||++ |+.||..... .... ....... +
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~----~~~~-~~~~~~~--------~--- 215 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL----KEVK-ECVEKGY--------R--- 215 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH----HHHH-HHHhCCC--------C---
Confidence 122334678999999988889999999999999999998 8999865432 1111 1121110 0
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
...+......+.+++.+||+.+|++||+++++++.|++
T Consensus 216 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 -MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 00111223467899999999999999999999998874
No 276
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.1e-33 Score=308.68 Aligned_cols=256 Identities=22% Similarity=0.374 Sum_probs=202.3
Q ss_pred CCcCCceecccCCeEEEEEEeCC--CcEEEEEEecccCC-------CChhhHHHHHHHHHHHhc-CCCCceeeEEeEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLRT--GHTVAVKKLASNRE-------GNNNVDNSFRAEILTLGK-IRHRNIVKLYGFCYH 879 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 879 (1114)
+|++.+.||+|+||+||+|.++. ++.+|+|.+..... .......++..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999764 68899998864321 122234556678887764 799999999999999
Q ss_pred cCceEEEEecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeec
Q 001253 880 QGSNLLMYEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDF 956 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 956 (1114)
++..++||||+++++|.+++.. ....+++..+..++.|++.|+.|||+. .+++|+||+|+||++++++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999998742 345789999999999999999999963 18999999999999999999999999
Q ss_pred cCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcc
Q 001253 957 GLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLV 1036 (1114)
Q Consensus 957 G~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1114)
|.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ....... ......
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~----~~~~~~~-~~~~~~ 231 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM----LSLATKI-VEAVYE 231 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH----HHHHHHH-hhccCC
Confidence 9998754322 33455688999999999988899999999999999999999999864321 2222211 111110
Q ss_pred cccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1037 SGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
+ .........+.+++.+||+.||++||++.|+.+++++
T Consensus 232 -----~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 232 -----P------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred -----c------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 0 0001123468899999999999999999999998864
No 277
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.6e-33 Score=315.07 Aligned_cols=254 Identities=23% Similarity=0.306 Sum_probs=204.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..+.||+|+||+||+|... +++.||+|.+...........+.+..|+++++.++||||+++++.+.+.+..|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999976 58999999998765443344567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||+.+++|.++++.. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999999753 35789999999999999999999998 99999999999999999999999999987543211
Q ss_pred C----------------------------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 001253 967 S----------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQ 1018 (1114)
Q Consensus 967 ~----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~ 1018 (1114)
. .......|+..|+|||++.+..++.++||||+|+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 1 011234688999999999988899999999999999999999999975443
Q ss_pred CCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 001253 1019 GGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPT----MREVVL 1081 (1114)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 1081 (1114)
... ....... .... .........+.+++.+||..||++||+ +.|++.
T Consensus 238 ~~~----~~~~~~~----------~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 DET----FSNILKK----------EVTF--PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHH----HHHHhcC----------CccC--CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 211 1111111 0000 011113457899999999999999999 555554
No 278
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.6e-33 Score=311.13 Aligned_cols=265 Identities=23% Similarity=0.318 Sum_probs=199.5
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
++++|++.+.||+|+||.||+|..+ +|+.||+|++....... ....+.+|+.+++.++|+||+++++++..++..|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG--VPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC--CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 3478999999999999999999975 68999999987554322 23456789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+. +++.+++......+.+..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 999996 577777765556678888999999999999999998 9999999999999999999999999999764322
Q ss_pred CCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHh-------------
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIR------------- 1031 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~------------- 1031 (1114)
. .......+++.|+|||++.+. .++.++||||+||++|||++|+.||...... .+.+.+...
T Consensus 157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07870 157 S-QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV---FEQLEKIWTVLGVPTEDTWPGV 232 (291)
T ss_pred C-CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHHHHHHcCCCChhhhhhh
Confidence 2 222344578999999998754 5788999999999999999999999754432 111111111
Q ss_pred --cCCcccccccccccCC---CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1032 --NNSLVSGMLDARLNLQ---DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1032 --~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+............ ..........+.+++.+|++.||++|||+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000000000000 0000111346788999999999999999999864
No 279
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.1e-33 Score=323.69 Aligned_cols=263 Identities=22% Similarity=0.305 Sum_probs=196.6
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec-----
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ----- 880 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 880 (1114)
..++|++.+.||+|+||+||+|... +++.||||++....... ...+.+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhh-HHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4578999999999999999999975 78899999987543221 2244567899999999999999999987543
Q ss_pred -CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 881 -GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 881 -~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
...|+++|++ +++|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccc
Confidence 3468999998 669998886 34689999999999999999999998 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc--c
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL--V 1036 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 1036 (1114)
+.... ......|++.|+|||++.+ ..++.++||||+||++|+|++|+.||...........+. ........ .
T Consensus 166 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (343)
T cd07878 166 RQADD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIM-EVVGTPSPEVL 240 (343)
T ss_pred eecCC----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HHhCCCCHHHH
Confidence 86542 2234578999999999876 568899999999999999999999997543211111111 10000000 0
Q ss_pred ccc-------ccccccCCCccc-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGM-------LDARLNLQDEKT-----VSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~-------~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+ ....+....... ......+.+++.+|++.||.+|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 241 KKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 000000000000 011234678999999999999999999985
No 280
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.6e-33 Score=314.21 Aligned_cols=267 Identities=25% Similarity=0.395 Sum_probs=202.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||.||+|.++ +++.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 46888899999999999999986 68999999987544332 33556788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||++++++.++... ...+++.++..++.|+++|++|||+. +++|||++|+||++++++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 80 EFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred ecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999999887763 34589999999999999999999998 99999999999999999999999999998654322
Q ss_pred CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH----------HHHhcCCcc
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR----------NFIRNNSLV 1036 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~----------~~~~~~~~~ 1036 (1114)
.......++..|+|||+..+ ..++.++||||||+++|||++|+.||.............. .........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHh
Confidence 22334568899999998875 4477899999999999999999998864332111111100 000000000
Q ss_pred cccccccccCCC---cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGMLDARLNLQD---EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+..+...... .........+.+++.+||+.+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000000 001122456889999999999999999999875
No 281
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.6e-33 Score=308.57 Aligned_cols=252 Identities=27% Similarity=0.451 Sum_probs=206.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|+..+.||+|+||.||+|.++ +++.||+|++...... ...+.+.+|+..+++++||||+++++++..+...++|+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 35778889999999999999987 6899999998765432 34567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHH-DCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||+++++|.+++......+++.....++.|+++|++|+|+ . +++|+||||+||++++++.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 9999999999998655788999999999999999999999 7 99999999999999999999999999987553221
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC-CCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQG-GDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
. ....++..|+|||...+..++.++||||+|+++|+|++|+.||...... ....+.++.......
T Consensus 156 ~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 221 (265)
T cd06605 156 A---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP----------- 221 (265)
T ss_pred h---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC-----------
Confidence 1 1266889999999999989999999999999999999999999754321 222333333222110
Q ss_pred CCCcccHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTVS-HMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+.. ....+.++|.+||..||++|||+.|++.
T Consensus 222 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 222 --PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred --CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 001111 3456889999999999999999999874
No 282
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-34 Score=308.26 Aligned_cols=256 Identities=21% Similarity=0.338 Sum_probs=200.8
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 884 (1114)
+....|++.++||+||.+.||++...+.+.||+|++..... +.....-|..|+..+.+++ |.+||++++|-..++..|
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~-D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEA-DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhc-CHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 34567999999999999999999988888899998765443 3445678999999999994 899999999999999999
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+||||=+- +|..++++.......-.++.+..|++.|+.++|.+ ||||.||||.|+|+-. |.+||+|||+|..+..
T Consensus 437 mvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 437 MVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred EEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 99998654 99999987666555347788899999999999999 9999999999999864 5899999999998764
Q ss_pred CCCC-ccccccccccccCccccccCC-----------CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc
Q 001253 965 PQSK-SMSAIAGSYGYIAPEYAYTMK-----------VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN 1032 (1114)
Q Consensus 965 ~~~~-~~~~~~g~~~y~aPE~~~~~~-----------~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1032 (1114)
+... .....+||+.||+||.+.... .+.++||||+|||+|+|+.|++||.. +...+.++.
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~------~~n~~aKl~-- 583 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ------IINQIAKLH-- 583 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH------HHHHHHHHH--
Confidence 4332 345678999999999886433 45689999999999999999999963 222222211
Q ss_pred CCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1033 NSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.+.++.-....+.. ....++.++|+.||.+||.+||+..|+++
T Consensus 584 -----aI~~P~~~Iefp~~-~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 584 -----AITDPNHEIEFPDI-PENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -----hhcCCCccccccCC-CCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 12222111001111 11123889999999999999999999875
No 283
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.3e-33 Score=306.40 Aligned_cols=251 Identities=28% Similarity=0.443 Sum_probs=201.7
Q ss_pred CcCCceecccCCeEEEEEEeCC-----CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 811 FDERFVIGRGACGTVYRAVLRT-----GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
|++.+.||+|+||.||+|++.. +..||+|++...... ...+.+..|+..++.++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 4567899999999999999763 388999998655432 135678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGASST-LDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+|||+++++|.+++...... +++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||.+.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 99999999999999754444 89999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
..........+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... .....+.. .....
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~----~~~~~~~~-~~~~~-------- 222 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS----NEEVLEYL-KKGYR-------- 222 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHH-hcCCC--------
Confidence 32222212337789999999988889999999999999999998 778876422 12222221 11110
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
...+......+.+++.+|++.||++|||+.|+++.|
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 ----LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011111344688899999999999999999998764
No 284
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.6e-33 Score=312.42 Aligned_cols=248 Identities=27% Similarity=0.396 Sum_probs=201.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+.|+..+.||+|+||.||+|.+. +++.||+|.+..... ....+.+.+|+..+++++||||+++++++..+...++||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 34666778999999999999875 678999999864432 233567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++. ...+++..+..++.|+++|++|+|+. +++|+||+|+||++++++.++++|||++.......
T Consensus 82 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06642 82 EYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred EccCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc-
Confidence 9999999999986 34688999999999999999999998 99999999999999999999999999997654221
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||....... ... ...... .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~----~~~~~~------~------ 218 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR-VLF----LIPKNS------P------ 218 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh-HHh----hhhcCC------C------
Confidence 12233468889999999998889999999999999999999999986443211 111 111110 0
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..........+.+++.+||+.+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 219 PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0111123346889999999999999999999997
No 285
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.2e-33 Score=312.40 Aligned_cols=249 Identities=27% Similarity=0.388 Sum_probs=201.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+.|+..+.||+|+||+||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 55888899999999999999976 68999999987554444444567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++ ++.+++......+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||++......
T Consensus 95 e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 95 EYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred HhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 99975 78787765556799999999999999999999998 9999999999999999999999999998764321
Q ss_pred CccccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
....+++.|+|||++. ...++.++||||||+++|||++|+.||..... ............ +.
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~----~~~~~~~~~~~~-------~~- 233 (307)
T cd06607 169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNDS-------PT- 233 (307)
T ss_pred ---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH----HHHHHHHhcCCC-------CC-
Confidence 2346888999999874 45688899999999999999999999864332 111111111100 00
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
.........+.+++.+||+.+|++||++.+++..
T Consensus 234 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 234 ----LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ----CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0111234568899999999999999999999874
No 286
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.7e-33 Score=312.70 Aligned_cols=267 Identities=24% Similarity=0.353 Sum_probs=203.7
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||.||+|.++ +++.||+|+++..... ....+.+.+|++++++++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 36888999999999999999976 6889999998754332 233567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||++++.+..+.. ....+++.++..++.|++.|++|||+. +++|||++|+||++++++.+||+|||.+........
T Consensus 80 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 80 EYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred ecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9999877766655 345689999999999999999999998 999999999999999999999999999987654333
Q ss_pred CccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc-----------CCc
Q 001253 968 KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN-----------NSL 1035 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~ 1035 (1114)
.......++..|+|||++.+. .++.++||||+|+++|+|++|+.||......+.. ......... ...
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL-YLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCCHHHhhhcccCcc
Confidence 233445688999999999888 7899999999999999999999998754321111 111111000 000
Q ss_pred ccccccccccC----CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1036 VSGMLDARLNL----QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1036 ~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
........... ....+.....++.+++.+||+.+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000000 00011112467899999999999999999999875
No 287
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.5e-33 Score=312.39 Aligned_cols=266 Identities=24% Similarity=0.332 Sum_probs=201.5
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCC--ChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREG--NNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
+|+..+.||+|+||.||+|..+ +|+.||||++...... .......+..|+.++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999976 6899999999765433 122345577899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+ +|+|.+++......+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 8899999985545799999999999999999999998 99999999999999999999999999998764322
Q ss_pred CCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc-----ccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL-----VSGML 1040 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 1040 (1114)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||......+......+ ....... .....
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 157 -RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFE-ALGTPTEENWPGVTSLP 234 (298)
T ss_pred -ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHH-HcCCCchhhhhhccccc
Confidence 22233456788999998864 4578899999999999999999777764332211111111 1100000 00000
Q ss_pred cc-cccCCCc-----ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1041 DA-RLNLQDE-----KTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1041 ~~-~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+. ....... ........+.+++.+||++||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00 0000000 01122457889999999999999999999987
No 288
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.1e-33 Score=308.64 Aligned_cols=251 Identities=24% Similarity=0.359 Sum_probs=188.0
Q ss_pred eecccCCeEEEEEEeCC---CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 816 VIGRGACGTVYRAVLRT---GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
.||+|+||+||+|...+ ...+|+|.+.... .......+.+|+..++.++||||+++++++......++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 58999999999998543 3568888765432 223355678899999999999999999999999999999999999
Q ss_pred CCHHHHhccCCC----CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-
Q 001253 893 GSLGELLHGASS----TLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS- 967 (1114)
Q Consensus 893 gsL~~~l~~~~~----~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~- 967 (1114)
|+|.+++..... ..++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 999999975432 346788889999999999999998 999999999999999999999999999875322111
Q ss_pred CccccccccccccCccccc-------cCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY-------TMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~-------~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
.......++..|+|||+.. ...++.++||||+||++|||++ |..||...... +........... ..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----~~~~~~~~~~~~--~~ 230 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE----QVLKQVVREQDI--KL 230 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH----HHHHHHhhccCc--cC
Confidence 1122335677899999874 3456789999999999999999 77888644321 122222222110 00
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
.. ..........+.+++..|| .||++|||++||++.|.
T Consensus 231 ~~------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PK------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CC------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 00 0111123345667888898 49999999999999874
No 289
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7.6e-33 Score=304.73 Aligned_cols=253 Identities=31% Similarity=0.442 Sum_probs=203.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..+.||+|+||.||+|... +++.||+|+++..... ....+.+..|+.++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 5788899999999999999975 7899999998766543 3456778999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++++|.+++... ..+++..+..++.++++|++|||+. +++|+||+|+||++++++.+||+|||.+.........
T Consensus 80 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 80 YCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred cCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999999999743 4578999999999999999999998 9999999999999999999999999999876433322
Q ss_pred cc---ccccccccccCccccccCC---CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccc
Q 001253 969 SM---SAIAGSYGYIAPEYAYTMK---VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA 1042 (1114)
Q Consensus 969 ~~---~~~~g~~~y~aPE~~~~~~---~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1114)
.. ....+++.|+|||++.+.. ++.++||||||+++||+++|+.||...+... ..... ..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~---~~~~~-~~~~~------~~ 225 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF---QIMFH-VGAGH------KP 225 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH---HHHHH-HhcCC------CC
Confidence 21 2356889999999998766 8899999999999999999999997543211 11111 01000 00
Q ss_pred cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1043 RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1043 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. +........+.+++.+||+.+|++||++.|++.
T Consensus 226 ~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 226 PI----PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CC----CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 01 011112446778999999999999999999864
No 290
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.5e-33 Score=304.31 Aligned_cols=249 Identities=24% Similarity=0.390 Sum_probs=202.0
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..+.||+|+||.||+|... +++.+|+|++....... ...+.+..|+.++++++|||++++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 4788899999999999999975 78899999987654322 335678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-CeEEeeccCceecCCCC
Q 001253 889 YMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF-EAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG~a~~~~~~~ 966 (1114)
|+++++|.+++... ...+++..+..++.++++|++|||+. +++||||+|+||++++++ .+|++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK- 155 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC-
Confidence 99999999999754 34589999999999999999999998 999999999999998654 5899999999875422
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
.......++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... .......... ..
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~----~~~~~~~~~~-~~----------- 218 (256)
T cd08220 156 -SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL----PALVLKIMSG-TF----------- 218 (256)
T ss_pred -ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch----HHHHHHHHhc-CC-----------
Confidence 222345688999999999988899999999999999999999999865432 1222221111 00
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+||+++|.+|||+.|+++
T Consensus 219 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 219 -APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0011112346889999999999999999999975
No 291
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3e-33 Score=312.25 Aligned_cols=246 Identities=22% Similarity=0.304 Sum_probs=202.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||.||+|.+. +++.||+|++...........+.+.+|++++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999976 68999999997654433344567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 999999999999744 5789999999999999999999998 9999999999999999999999999999875432
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.....+++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ....+... .+. ..
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~-~~~---------~~-- 216 (290)
T cd05580 155 --TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP----IQIYEKIL-EGK---------VR-- 216 (290)
T ss_pred --CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHh-cCC---------cc--
Confidence 2345688999999999888899999999999999999999999964331 11112111 111 00
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRP-----TMREVV 1080 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl 1080 (1114)
.+......+.+++.+||..||.+|| +++|++
T Consensus 217 --~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 217 --FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred --CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 1111234678899999999999999 556554
No 292
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9.6e-33 Score=312.72 Aligned_cols=193 Identities=24% Similarity=0.424 Sum_probs=159.7
Q ss_pred ceecccCCeEEEEEEeC---CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe--cCceEEEEec
Q 001253 815 FVIGRGACGTVYRAVLR---TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH--QGSNLLMYEY 889 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~ 889 (1114)
.+||+|+||+||+|+.+ ++..||+|.+..... ...+.+|+.+++.++||||+++++++.. +...++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 57999999999999975 457899999865432 3456789999999999999999999854 4567899999
Q ss_pred CCCCCHHHHhcc--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE----CCCCCeEEeecc
Q 001253 890 MARGSLGELLHG--------ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILL----DDKFEAHVGDFG 957 (1114)
Q Consensus 890 ~~~gsL~~~l~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfG 957 (1114)
+++ ++.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 976 78777642 123588999999999999999999998 99999999999999 566799999999
Q ss_pred CceecCCCCC--CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 001253 958 LAKVIDMPQS--KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPL 1016 (1114)
Q Consensus 958 ~a~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~ 1016 (1114)
+++....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9987643322 22334578999999999876 45789999999999999999999999643
No 293
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.4e-33 Score=310.47 Aligned_cols=252 Identities=25% Similarity=0.411 Sum_probs=200.9
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||+||+|+++ +|+.||+|.+..... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD--ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 46888899999999999999986 789999999865422 223456888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 888 EYMARGSLGELLHGA--SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||+++++|.++++.. ...+++..+..++.|++.|+.|||+.. +++||||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 999999999998753 237899999999999999999999632 8999999999999999999999999999765322
Q ss_pred CCCccccccccccccCccccccCC------CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMK------VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~------~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
......+++.|+|||.+.+.. ++.++||||+||++|||++|+.||...... .....+...... .
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~-~----- 226 (286)
T cd06622 157 ---LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-NIFAQLSAIVDG-D----- 226 (286)
T ss_pred ---ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-hHHHHHHHHhhc-C-----
Confidence 223346888999999886543 478999999999999999999999653321 111111111111 0
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....+......+.+++.+||+.+|++||++.+++.
T Consensus 227 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 227 -------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred -------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 01112224456889999999999999999999987
No 294
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.7e-33 Score=310.37 Aligned_cols=258 Identities=25% Similarity=0.391 Sum_probs=200.6
Q ss_pred CHHHHHHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEE
Q 001253 800 TFKDLVVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFC 877 (1114)
Q Consensus 800 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 877 (1114)
+..++..+.+.|++.+.||+|+||+||+|+.. +++.||+|++..... ....+..|+.+++++ +||||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED----EEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH----HHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 33444456678999999999999999999975 688999999864322 245677899999888 699999999998
Q ss_pred Ee------cCceEEEEecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC
Q 001253 878 YH------QGSNLLMYEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE 950 (1114)
Q Consensus 878 ~~------~~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 950 (1114)
.. ....|++|||+++|+|.+++... ...+++..+..++.|+++|++|||+. +++||||+|+||++++++.
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 53 45679999999999999999753 34588888999999999999999998 9999999999999999999
Q ss_pred eEEeeccCceecCCCCCCccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHH
Q 001253 951 AHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTW 1025 (1114)
Q Consensus 951 ~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~ 1025 (1114)
++|+|||++....... .......|++.|+|||.+. +..++.++||||+||++|||++|+.||..........
T Consensus 160 ~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-- 236 (282)
T cd06636 160 VKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-- 236 (282)
T ss_pred EEEeeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh--
Confidence 9999999987653221 2233456899999999875 3467889999999999999999999996543211111
Q ss_pred HHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1026 VRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
. ..... ... .........+.+++.+||+.||.+||++.|+++
T Consensus 237 --~-~~~~~------~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 --L-IPRNP------PPK-----LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --h-HhhCC------CCC-----CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 00000 000 011122346889999999999999999999864
No 295
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7e-33 Score=303.86 Aligned_cols=250 Identities=27% Similarity=0.371 Sum_probs=202.3
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCC--CChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNRE--GNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
+|+..+.||+|+||+||+|..+ +++.||+|.+..... ..++..+.+.+|+.+++.++|+||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777889999999999999986 789999999865432 2233456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 9999999999999743 4688999999999999999999998 99999999999999999999999999988653222
Q ss_pred CCccccccccccccCccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
......|+..|+|||.+.... ++.++|+||+|+++|++++|+.||..... .............
T Consensus 157 --~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~---------- 220 (258)
T cd06632 157 --FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVFKIGRSKEL---------- 220 (258)
T ss_pred --cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHHHHHhcccC----------
Confidence 234456889999999987766 89999999999999999999999965431 1111111110000
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+||+.+|.+||++.+++.
T Consensus 221 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 --PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0111122346788999999999999999999875
No 296
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1e-32 Score=304.45 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=203.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCC---hhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGN---NNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 885 (1114)
+|+..+.||+|+||.||+|... +++.||+|++....... ....+.+..|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4778889999999999999964 78999999987544322 2235678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-CeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF-EAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG~a~~~~~ 964 (1114)
||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++ .++|+|||.+.....
T Consensus 81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 9999999999999974 34688999999999999999999998 999999999999998776 599999999976543
Q ss_pred CCCC---ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 965 PQSK---SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 965 ~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
.... ......++..|+|||.+.+..++.++||||+|+++|++++|..||........ ...+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~--------- 226 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIFKIASA--------- 226 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHHHHhcc---------
Confidence 2111 12234688999999999888899999999999999999999999964432221 2221111110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
......+......+.+++.+|++.+|.+||++.|++.
T Consensus 227 ---~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 227 ---TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ---CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0011222334457889999999999999999999874
No 297
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.9e-33 Score=309.06 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=200.3
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecC---
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQG--- 881 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--- 881 (1114)
+.++|++.+.||+|++|+||+|..+ +++.+|+|++..... ..+.+.+|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 4578999999999999999999986 678999999865433 245688999999999 7999999999997644
Q ss_pred ---ceEEEEecCCCCCHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEee
Q 001253 882 ---SNLLMYEYMARGSLGELLHGA---SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGD 955 (1114)
Q Consensus 882 ---~~~lv~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 955 (1114)
..++||||+++++|.++++.. ...+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 479999999999999998643 35789999999999999999999998 999999999999999999999999
Q ss_pred ccCceecCCCCCCccccccccccccCcccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 001253 956 FGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFI 1030 (1114)
Q Consensus 956 fG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 1030 (1114)
||.+...... ........|+..|+|||++.. ..++.++||||+||++|+|++|+.||........ .....
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~ 231 (275)
T cd06608 157 FGVSAQLDST-LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA----LFKIP 231 (275)
T ss_pred Cccceecccc-hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH----HHHhh
Confidence 9999865322 222334568899999998753 3467899999999999999999999964332111 11111
Q ss_pred hcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1031 RNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.. . ... ...+......+.+++.+||..||++|||+.|+++
T Consensus 232 ~~-~------~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 RN-P------PPT----LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cc-C------CCC----CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 0 000 1111223456889999999999999999999975
No 298
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9.8e-33 Score=303.97 Aligned_cols=252 Identities=26% Similarity=0.343 Sum_probs=198.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCC--ChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--Cce
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREG--NNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSN 883 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 883 (1114)
.+|++.+.||+|+||.||+|..+ +|+.||+|++...... .....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999975 6899999998643322 222345788899999999999999999998764 457
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++++|.+++... ..+++.....++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 8999999999999998743 4578889999999999999999998 99999999999999999999999999987643
Q ss_pred CCC--CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 964 MPQ--SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 964 ~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
... ........|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+.......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~-------- 225 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAAIFKIATQP-------- 225 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHHHHHHhcCC--------
Confidence 211 1122335688999999999888899999999999999999999999964321 11111111110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.....+......+.+++.+|+. +|++||+++|+++
T Consensus 226 ----~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 ----TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ----CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0011233344567889999995 9999999999874
No 299
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-35 Score=345.26 Aligned_cols=252 Identities=29% Similarity=0.380 Sum_probs=206.8
Q ss_pred cCCcCCceecccCCeEEEEEEe-CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVL-RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
-+++...+||.|.||.||-|.. .+|+-.|+|.++-.... ....+.+.+|+.++..++|||+|+++|+-.+++..++.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 4677778999999999999995 58999999998765544 455677889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC-
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ- 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~- 966 (1114)
|||++|+|.+++. .+...++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||.|+.+..+.
T Consensus 1314 EyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred HHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 9999999999997 455677777788899999999999999 99999999999999999999999999999775432
Q ss_pred --CCccccccccccccCccccccCC---CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 967 --SKSMSAIAGSYGYIAPEYAYTMK---VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 967 --~~~~~~~~g~~~y~aPE~~~~~~---~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
........||+.|||||++.+.. ...++||||+||++.||+||+.||...+..- +.... +
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---aIMy~-V----------- 1454 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---AIMYH-V----------- 1454 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---HHHhH-H-----------
Confidence 12234568999999999997543 5568999999999999999999998665421 11111 1
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.....+..+.....+-.+|+.+|+..||++|.++.|+++
T Consensus 1455 -~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1455 -AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred -hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 111223445556677889999999999999998886553
No 300
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.9e-33 Score=307.96 Aligned_cols=249 Identities=29% Similarity=0.453 Sum_probs=196.4
Q ss_pred ceecccCCeEEEEEEeCC-------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 815 FVIGRGACGTVYRAVLRT-------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+.||+|+||.||+|++++ ++.+|+|.+...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD--QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccch--hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 368999999999999652 257999988654321 23556888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccC------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-----CeEEeec
Q 001253 888 EYMARGSLGELLHGA------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF-----EAHVGDF 956 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-----~~kl~Df 956 (1114)
||+++++|.+++... ...+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++++||
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 999999999998642 23578899999999999999999998 999999999999999887 8999999
Q ss_pred cCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcCC
Q 001253 957 GLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNNS 1034 (1114)
Q Consensus 957 G~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1034 (1114)
|+++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+.... +..+.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~----~~~~~~-~~~~~ 230 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN----QEVLQH-VTAGG 230 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH----HHHHHH-HhcCC
Confidence 99976532221 11223345678999999999999999999999999999998 9999864332 111111 11110
Q ss_pred cccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1035 LVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
.. ..+......+.+++.+||..+|.+||+++++++.|++
T Consensus 231 --------~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 --------RL----QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred --------cc----CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00 1112233568899999999999999999999999864
No 301
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.7e-33 Score=306.06 Aligned_cols=250 Identities=23% Similarity=0.287 Sum_probs=205.7
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|++.+.||.|+||.||+|+++ +++.||+|++...........+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999986 689999999986654443456788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++++|.+++... ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999999754 5789999999999999999999998 99999999999999999999999999988654221
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... ............ ..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~-------------~~ 219 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQETA-------------DV 219 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhccc-------------cc
Confidence 223456888999999999888999999999999999999999999765432 122222211110 01
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCH--HHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTM--REVV 1080 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 1080 (1114)
..+......+.+++.+||+.||.+||++ +|++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 220 LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 1122233578899999999999999999 5543
No 302
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.6e-32 Score=301.82 Aligned_cols=245 Identities=25% Similarity=0.317 Sum_probs=199.5
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
||.|+||+||+|+.. +++.||+|++...........+.+..|+.+++.++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999976 5899999999866554444567799999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccc
Q 001253 896 GELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAG 975 (1114)
Q Consensus 896 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g 975 (1114)
.+++.+. ..+++..+..++.|++.|++|+|+. +++|+||+|+||+++.++.++|+|||.+....... ......+
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~ 154 (262)
T cd05572 81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCG 154 (262)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccC
Confidence 9999743 4589999999999999999999998 99999999999999999999999999998654321 2233468
Q ss_pred cccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHH
Q 001253 976 SYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHM 1055 (1114)
Q Consensus 976 ~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1114)
++.|+|||.+.+..++.++|+||+|+++|+|++|..||..... +..+..+....... . ...+....
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~--------~----~~~~~~~~ 220 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE--DPMEIYNDILKGNG--------K----LEFPNYID 220 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC--CHHHHHHHHhccCC--------C----CCCCcccC
Confidence 8999999999888899999999999999999999999975442 22233332221100 0 11111224
Q ss_pred HHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 001253 1056 ITVLKIAMLCTNISPFDRPT-----MREVVL 1081 (1114)
Q Consensus 1056 ~~l~~li~~cl~~dP~~RPs-----~~evl~ 1081 (1114)
..+.+++.+||+.+|++||+ ++|+++
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 57899999999999999999 555543
No 303
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=337.92 Aligned_cols=273 Identities=24% Similarity=0.259 Sum_probs=218.1
Q ss_pred HHHHHHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe
Q 001253 801 FKDLVVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH 879 (1114)
Q Consensus 801 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 879 (1114)
..++....++|.++++||+|+||.|..++++ +++.||.|++.+...-......-|+.|-.+|..-+.+-|++++-+|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3455567789999999999999999999986 789999999987433222235568899999999999999999999999
Q ss_pred cCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 880 QGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
+.+.|+|||||+||+|-.++.+.. .+++..+..++..|+-||..+|+. |+|||||||+|||+|..|++||+|||.+
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhH
Confidence 999999999999999999998776 899999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCccccc----c-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAY----T-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS 1034 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~----~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1034 (1114)
..++.+..-.....+|||.|.+||++. + +.|+..+|.||+||++|||+.|..||+...-.+.+..+. ..
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm----~h-- 296 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIM----NH-- 296 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHh----ch--
Confidence 887766666667789999999999985 3 568899999999999999999999998533222221111 11
Q ss_pred cccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCC---HHHHHHHHHhhhccCCCcccccCCCCC
Q 001253 1035 LVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPT---MREVVLMLSESNRRQGHFEFSPMDHDS 1102 (1114)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~L~~i~~~~~~~~~~~~~~~~ 1102 (1114)
...+.++ .....+.+..++|++.+. +|+.|.. +.++ ..+.+|..+||++
T Consensus 297 ------k~~l~FP--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedi----------k~HpFF~g~~W~~ 348 (1317)
T KOG0612|consen 297 ------KESLSFP--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDI----------KNHPFFEGIDWDN 348 (1317)
T ss_pred ------hhhcCCC--cccccCHHHHHHHHHHhc-ChhhhcccccHHHH----------HhCccccCCChhh
Confidence 1122222 222345567788887776 7778877 5543 3466777777754
No 304
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-34 Score=317.63 Aligned_cols=247 Identities=25% Similarity=0.391 Sum_probs=196.3
Q ss_pred CCceecccCCeEEEEEEeC-CCcEEEEEEecc-cCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc--eEEEEe
Q 001253 813 ERFVIGRGACGTVYRAVLR-TGHTVAVKKLAS-NREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS--NLLMYE 888 (1114)
Q Consensus 813 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~-~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~E 888 (1114)
...+||+|+|-+||+|.+. +|..||--.++- .....+...+.|..|+.+++.++||||++++.++.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3457999999999999976 577776433321 122233445789999999999999999999999987665 678999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-CCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD-KFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG~a~~~~~~~~ 967 (1114)
.+..|+|..|.++. +.++......|++||++||.|||++ +|+|+|||||-+||+|+. .|.|||+|.|+|........
T Consensus 124 L~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 124 LFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred cccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 99999999999844 4788899999999999999999998 889999999999999985 58999999999998653322
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
..+.|||.|||||+.. ..|+..+||||||+.+.||+|+..||.........++.+-. ++....+..-
T Consensus 202 ---ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S---------GiKP~sl~kV 268 (632)
T KOG0584|consen 202 ---KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS---------GIKPAALSKV 268 (632)
T ss_pred ---ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc---------CCCHHHhhcc
Confidence 3378999999999876 77999999999999999999999999866543333332221 1212222111
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.-+++.+||.+|+.. .++|||+.|++.
T Consensus 269 ------~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 269 ------KDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ------CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 123688999999998 899999999975
No 305
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.3e-33 Score=313.07 Aligned_cols=249 Identities=24% Similarity=0.398 Sum_probs=198.7
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.|.....||+|+||.||++... +++.||||++..... ...+.+.+|+..++.++||||+++++.+..++..++|||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ---QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH---HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 3444567999999999999975 688999999864332 235568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||++....... .
T Consensus 100 ~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~ 173 (292)
T cd06658 100 FLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-P 173 (292)
T ss_pred CCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-c
Confidence 9999999999863 4588999999999999999999998 99999999999999999999999999987543222 2
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
......|+..|+|||...+..++.++||||+|+++|||++|+.||..... .......... . ....
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~~~~~~~~~~--~-----~~~~---- 238 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP----LQAMRRIRDN--L-----PPRV---- 238 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhc--C-----CCcc----
Confidence 22345689999999999888899999999999999999999999974332 1111111110 0 1111
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
.........+.+++.+||..||.+|||++|+++.
T Consensus 239 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 239 KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0111123357789999999999999999999864
No 306
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.8e-32 Score=301.76 Aligned_cols=250 Identities=24% Similarity=0.385 Sum_probs=202.2
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe--cCceEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH--QGSNLLM 886 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 886 (1114)
+|++.+.||.|+||.||+|... +++.||+|++...... ....+.+..|+++++.++||||+++++++.. +...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 4788899999999999999965 7889999998754432 3335668889999999999999999998764 3457899
Q ss_pred EecCCCCCHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEecCCCCCCeEECCCCCeEEeeccC
Q 001253 887 YEYMARGSLGELLHGA---SSTLDWQTRFMIALGAAEGLSYLH-----HDCKPRIFHRDIKSNNILLDDKFEAHVGDFGL 958 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 958 (1114)
|||+++++|.+++... ...+++..+..++.|++.|++|+| +. +++|+||+|+||++++++.+|++|||+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccc
Confidence 9999999999998643 457899999999999999999999 65 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccc
Q 001253 959 AKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSG 1038 (1114)
Q Consensus 959 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1114)
+........ ......+++.|+|||++.+..++.++||||||+++|+|++|+.||.... ... +...+.....
T Consensus 157 ~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~-~~~~~~~~~~--- 227 (265)
T cd08217 157 AKILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN----QLQ-LASKIKEGKF--- 227 (265)
T ss_pred cccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC----HHH-HHHHHhcCCC---
Confidence 987643221 1234568999999999998889999999999999999999999997543 111 2222222111
Q ss_pred cccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1039 MLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+......+.+++.+|++.+|++||++.+|++
T Consensus 228 ---------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 228 ---------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ---------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1112233457889999999999999999999986
No 307
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-32 Score=303.62 Aligned_cols=258 Identities=26% Similarity=0.359 Sum_probs=201.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--CceEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSNLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 885 (1114)
++|...++||.|++|.||+|..+ +++.+|+|.+...... .....+.+|++++++++||||++++++|.+. +..++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 36788899999999999999985 6889999998754332 3356688999999999999999999998654 46899
Q ss_pred EEecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 886 MYEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 9999999999988652 345688999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC-CCHHHHHHHHHhcCCccccccc
Q 001253 963 DMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQG-GDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 963 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
.... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ....+.... ......
T Consensus 156 ~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~------ 225 (287)
T cd06621 156 VNSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY-IVNMPN------ 225 (287)
T ss_pred cccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHH-HhcCCc------
Confidence 3221 12345788999999999889999999999999999999999999755321 111122211 111000
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+.............+.+++.+||+.+|++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 226 PELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0000001111123456889999999999999999999987
No 308
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.2e-32 Score=309.17 Aligned_cols=254 Identities=27% Similarity=0.370 Sum_probs=203.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.|+..+.||+|+||+||+|+.. ++..||+|++........+....+..|+.+++.++|||++++++++.++...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3677789999999999999975 688999999876544444455678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+.+ ++.+++......+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 106 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 9975 88888865566799999999999999999999998 999999999999999999999999999875432
Q ss_pred ccccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 969 SMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
.....|++.|+|||++. ...++.++|||||||++|||++|+.||....... .......... .
T Consensus 178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~----~~~~~~~~~~---------~- 242 (317)
T cd06635 178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQNES---------P- 242 (317)
T ss_pred -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHHhccC---------C-
Confidence 12346888999999874 4568899999999999999999999986543211 1111111110 0
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNR 1088 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1088 (1114)
..........+.+++.+||+.+|.+||++.++++.......
T Consensus 243 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 243 --TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred --CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 01111223468899999999999999999999987655443
No 309
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.4e-33 Score=311.62 Aligned_cols=248 Identities=22% Similarity=0.374 Sum_probs=198.7
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|+...+||+|+||.||+|..+ +++.||+|++...... ..+.+.+|+..++.++|||++++++++..++..++||||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc---hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 334457999999999999975 6899999998654322 245678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS 969 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 969 (1114)
+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++....... ..
T Consensus 100 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~ 173 (297)
T cd06659 100 LQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PK 173 (297)
T ss_pred CCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc-cc
Confidence 999999998863 4689999999999999999999998 99999999999999999999999999987543222 22
Q ss_pred cccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCc
Q 001253 970 MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDE 1049 (1114)
Q Consensus 970 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1114)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||..... ....+. +..... ... .
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~-~~~~~~------~~~----~ 238 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP----VQAMKR-LRDSPP------PKL----K 238 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHH-HhccCC------CCc----c
Confidence 2345689999999999988899999999999999999999999974332 111111 111100 000 0
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1050 KTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1050 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
........+.+++.+||+.+|++||+++++++.
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 011122357889999999999999999999884
No 310
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8e-33 Score=309.53 Aligned_cols=266 Identities=24% Similarity=0.317 Sum_probs=201.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--CceEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSNLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 885 (1114)
++|+..+.||+|+||.||+|.++ +++.+|+|.++..... ......+.+|+.++++++||||+++++++... ...|+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 46888899999999999999986 6889999999755433 22234567899999999999999999999877 78999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+++ +|.+++......+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+......
T Consensus 84 v~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 84 VMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred EehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 9999985 99999876666799999999999999999999998 9999999999999999999999999999876533
Q ss_pred CCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc------------
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN------------ 1032 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~------------ 1032 (1114)
. .......+++.|+|||.+.+. .++.++|+||+|+++|||++|+.||.............. ....
T Consensus 160 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 160 L-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFK-LLGTPTEKIWPGFSEL 237 (293)
T ss_pred c-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-HhCCCchHHHHHhhcc
Confidence 2 222334578899999988754 468899999999999999999999975432211111110 0000
Q ss_pred CCcc-ccccccccc-CCCcccHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1033 NSLV-SGMLDARLN-LQDEKTVS-HMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1033 ~~~~-~~~~~~~~~-~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.... ......... .....+.. ....+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000 000000000 00001111 2446789999999999999999999975
No 311
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.2e-32 Score=304.77 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=198.8
Q ss_pred CcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----
Q 001253 811 FDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG----- 881 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 881 (1114)
|++.++||+|+||+||+|.++ +++.||||++....... ...+++.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 566789999999999999864 46889999997654333 33566888999999999999999999886532
Q ss_pred -ceEEEEecCCCCCHHHHhcc-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEee
Q 001253 882 -SNLLMYEYMARGSLGELLHG-----ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGD 955 (1114)
Q Consensus 882 -~~~lv~E~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 955 (1114)
..++++||+.+|+|.+++.. ....+++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 23788999999999988742 123578899999999999999999998 999999999999999999999999
Q ss_pred ccCceecCCCCC-CccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 956 FGLAKVIDMPQS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 956 fG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
||.++....... .......+++.|++||...+..++.++||||||+++|||++ |+.||..... ... ...+...
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~----~~~-~~~~~~~ 231 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN----SEI-YNYLIKG 231 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH----HHH-HHHHHcC
Confidence 999986532221 11223346678999999998889999999999999999999 8888864332 111 1111111
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.. .. .+......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 232 ~~--------~~----~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NR--------LK----QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred Cc--------CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10 00 0112234688999999999999999999999999876
No 312
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.2e-32 Score=306.48 Aligned_cols=251 Identities=23% Similarity=0.368 Sum_probs=193.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHH-HhcCCCCceeeEEeEEEecCceEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILT-LGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
++|++.+.||+|+||.||+|+++ +|+.||+|++........ ...+..|+.. ++..+||||+++++++..++..|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE--QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH--HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 46888999999999999999976 699999999876543221 2344445554 6667899999999999999999999
Q ss_pred EecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 887 YEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|||++ |+|.+++.. ....+++..+..++.|++.|++|||+++ +++||||||+||+++.++.+||+|||.+....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 99997 588887753 3357899999999999999999999742 79999999999999999999999999998653
Q ss_pred CCCCCccccccccccccCcccccc----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYT----MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
.. .......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||...... .+..........
T Consensus 156 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~----- 225 (283)
T cd06617 156 DS--VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQLKQVVEEPS----- 225 (283)
T ss_pred cc--cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHHHHHHHhcCC-----
Confidence 22 12233468889999998864 45688999999999999999999999643221 122222111100
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
... ........+.+++.+||..+|++||++.++++
T Consensus 226 --~~~-----~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 --PQL-----PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --CCC-----CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 00112346889999999999999999999986
No 313
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8.8e-33 Score=308.66 Aligned_cols=250 Identities=25% Similarity=0.364 Sum_probs=202.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|+||+||+|... +++.||+|.+...... ..+.+..|+.+++.++||||+++++++...+..|+|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP---KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch---HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 67899999999999999999865 6889999998643322 2456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++.+ ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~- 169 (293)
T cd06647 96 EYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 169 (293)
T ss_pred ecCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc-
Confidence 99999999999973 3578999999999999999999998 99999999999999999999999999887654222
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......+++.|+|||.+.+..++.++||||||+++|++++|+.||............ .. .+...
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~----~~---------~~~~~-- 234 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI----AT---------NGTPE-- 234 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh----hc---------CCCCC--
Confidence 2233456889999999998888999999999999999999999999754322111100 00 00000
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..........+.+++.+||+.+|++||++.+++..
T Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 235 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111223467889999999999999999999864
No 314
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=293.14 Aligned_cols=270 Identities=20% Similarity=0.333 Sum_probs=219.3
Q ss_pred HHHHHHHhcCCcCCceecccCCeEEEEEEeCC------CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEE
Q 001253 801 FKDLVVATDNFDERFVIGRGACGTVYRAVLRT------GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLY 874 (1114)
Q Consensus 801 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 874 (1114)
.+++.+...+++....+-+|.||.||.|.|++ .+.|.+|.++...... ....+..|.-.+..+.|||+.++.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~i--Qv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQI--QVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHH--HHHHHHHHHHHHhcCcCCCcccee
Confidence 44566777888888899999999999998763 3457788877655433 245677888889999999999999
Q ss_pred eEEEec-CceEEEEecCCCCCHHHHhcc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC
Q 001253 875 GFCYHQ-GSNLLMYEYMARGSLGELLHG-------ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLD 946 (1114)
Q Consensus 875 ~~~~~~-~~~~lv~E~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 946 (1114)
+++.++ +..++++.++.-|+|..++.. ..+.++..+...++.|++.|++|||++ +|||.||.++|++||
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 998654 567889999999999999972 234678888999999999999999999 999999999999999
Q ss_pred CCCCeEEeeccCceecCCCCCCc-cccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHH
Q 001253 947 DKFEAHVGDFGLAKVIDMPQSKS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVT 1024 (1114)
Q Consensus 947 ~~~~~kl~DfG~a~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~ 1024 (1114)
+.-.|||+|=.+++..-+.+.+. ......+..||+||.+....|+.++|||||||++|||+| |+.||...++ .++..
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP-fEm~~ 509 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP-FEMEH 509 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH-HHHHH
Confidence 99999999999999765444433 344557789999999999999999999999999999999 9999986654 33344
Q ss_pred HHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCC
Q 001253 1025 WVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGH 1092 (1114)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 1092 (1114)
++++..+ -..+..++.+++.+|..||..+|++||+++|++..|++...+-++
T Consensus 510 ylkdGyR----------------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~ 561 (563)
T KOG1024|consen 510 YLKDGYR----------------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTR 561 (563)
T ss_pred HHhccce----------------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhh
Confidence 4443221 123334556899999999999999999999999999998765443
No 315
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.4e-32 Score=299.55 Aligned_cols=253 Identities=28% Similarity=0.465 Sum_probs=208.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|++|.||+|+.+ +++.||+|++...... ...+.+..|+..+.+++|+|++++++++......++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 36888899999999999999987 5999999998765432 34677899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHH-DCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
||+++++|.+++... ..+++..+..++.|+++|++|+|+ . +++||||+|+||+++.++.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 79 EYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred EecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 999999999999744 678999999999999999999999 8 99999999999999999999999999998764322
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ....+..+....... .
T Consensus 155 ~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~-------~---- 221 (264)
T cd06623 155 D-QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-PSFFELMQAICDGPP-------P---- 221 (264)
T ss_pred C-cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-cCHHHHHHHHhcCCC-------C----
Confidence 2 22345688999999999988899999999999999999999999976543 223333333221110 0
Q ss_pred CCcccHH-HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1047 QDEKTVS-HMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1047 ~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..+.. ....+.+++.+|++++|++||++.|+++.
T Consensus 222 --~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 --SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 01111 33468899999999999999999999873
No 316
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=284.45 Aligned_cols=251 Identities=23% Similarity=0.301 Sum_probs=201.3
Q ss_pred hcCCcCC-ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEe----c
Q 001253 808 TDNFDER-FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYH----Q 880 (1114)
Q Consensus 808 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~ 880 (1114)
+++|++. ++||-|-.|.|-.+..+ +|+++|+|++.... ..++|++..-.. .|||||.++++|+. .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~--------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP--------KARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH--------HHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4556554 57999999999999976 89999999986432 245677765444 69999999999864 3
Q ss_pred CceEEEEecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---CCCeEEeec
Q 001253 881 GSNLLMYEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD---KFEAHVGDF 956 (1114)
Q Consensus 881 ~~~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~Df 956 (1114)
....+|||.|+||.|...+++++ ..+++.++..|+.||+.|+.|||+. .|.||||||+|+|... +..+||+||
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccc
Confidence 45679999999999999998654 4799999999999999999999999 9999999999999974 456999999
Q ss_pred cCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcc
Q 001253 957 GLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLV 1036 (1114)
Q Consensus 957 G~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1114)
|+|+... ......+.+-||.|.|||++...+|+..+|+||+||++|-|++|.+||+.... ..+..-.+..++.+
T Consensus 209 GFAK~t~--~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg-~aispgMk~rI~~g--- 282 (400)
T KOG0604|consen 209 GFAKETQ--EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-LAISPGMKRRIRTG--- 282 (400)
T ss_pred ccccccC--CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC-ccCChhHHhHhhcc---
Confidence 9999743 34556677899999999999999999999999999999999999999986553 22222233333332
Q ss_pred cccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.+.+..+.-...+....++|+.+++.+|++|.|..|++.
T Consensus 283 ------qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 283 ------QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ------CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 223333444455667888999999999999999999875
No 317
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.2e-32 Score=303.13 Aligned_cols=249 Identities=27% Similarity=0.388 Sum_probs=201.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
+-|+..++||+|+||.||+|.++ +++.||+|++..... ....+.+.+|+..+++++||||+++++++..++..++||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 34778889999999999999875 688999999864332 223467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++...... .
T Consensus 82 e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~-~ 155 (277)
T cd06641 82 EYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-Q 155 (277)
T ss_pred EeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccc-h
Confidence 99999999999873 4689999999999999999999998 9999999999999999999999999998765422 1
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
.......++..|+|||.+.+..++.++||||+||++|+|++|..||..... ...... +.....
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~-~~~~~~------------ 218 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP----MKVLFL-IPKNNP------------ 218 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch----HHHHHH-HhcCCC------------
Confidence 222334688899999999888899999999999999999999999864322 111111 111100
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..........+.+++.+||+.+|.+||++.++++.
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 219 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 01111223467889999999999999999999883
No 318
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.7e-32 Score=305.97 Aligned_cols=265 Identities=26% Similarity=0.349 Sum_probs=201.6
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--CceEEEE
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSNLLMY 887 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 887 (1114)
|++.+.||+|+||.||+|+.. +++.+|+|++.... ......+.+.+|+.+++.++|||++++++++.+. +..++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 567789999999999999977 58899999998664 2223345688899999999999999999999888 7899999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+++ +|.+++......+++..+..++.|+++|++|||+. +++|+||+|+||++++++.+||+|||.+........
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 99985 89999876556899999999999999999999998 999999999999999999999999999987654432
Q ss_pred CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC---c--cccc-c
Q 001253 968 KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS---L--VSGM-L 1040 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~--~~~~-~ 1040 (1114)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ...+.+...... + ...+ .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ-LEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchhhccccccchh
Confidence 22334467888999998765 4578999999999999999999999975442111 111111111000 0 0000 0
Q ss_pred cccccCCCcc-------cHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1041 DARLNLQDEK-------TVS-HMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1041 ~~~~~~~~~~-------~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.......... ... ....+.+++.+||+++|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000 001 1457889999999999999999999875
No 319
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.3e-33 Score=307.95 Aligned_cols=266 Identities=24% Similarity=0.354 Sum_probs=198.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..+.||+|++|.||+|+.+ +|+.||||++...... ....+.+..|++++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 4788899999999999999976 6899999998754432 2234568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+. ++|.+++... ...+++..+..++.|+++|++|||+. +++||||+|+||++++++.+||+|||.+.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~- 154 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 154 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-
Confidence 996 5898888643 35789999999999999999999998 99999999999999999999999999987654222
Q ss_pred CccccccccccccCccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcc----cccc--
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLV----SGML-- 1040 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-- 1040 (1114)
.......+++.|+|||.+.+.. ++.++||||||+++|||+||+.||..........+..+..-...... ....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 2223345788999999887644 58899999999999999999999975432222222111100000000 0000
Q ss_pred cccccCC-C----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1041 DARLNLQ-D----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1041 ~~~~~~~-~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....... . .........+.+++.+||+.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000 0 000112345778999999999999999999874
No 320
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.2e-32 Score=306.53 Aligned_cols=265 Identities=23% Similarity=0.317 Sum_probs=198.8
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|++.+.||.|++|+||+|.++ +|+.||+|++...... ......+.+|+.++++++|||++++++++.+++..++||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 567889999999999999976 7999999998755432 22345677899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 890 MARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
++ ++|.+++.... ..+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||.++.......
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 96 58999987543 4689999999999999999999998 999999999999999999999999999976542221
Q ss_pred ccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC-----------Ccc
Q 001253 969 SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN-----------SLV 1036 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~ 1036 (1114)
......++..|+|||++.+. .++.++||||+|+++|+|++|+.||..........+..+...... .+.
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 12233568899999987654 578899999999999999999999975433222222211100000 000
Q ss_pred cccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.....................+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000000001112246889999999999999999999874
No 321
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.3e-32 Score=304.46 Aligned_cols=265 Identities=23% Similarity=0.374 Sum_probs=199.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..++||+|++|+||+|+.+ +|+.||||++...... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4788899999999999999986 6899999998755432 224556789999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 889 YMARGSLGELLHGAS--STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|+++ ++.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.++++|||.+.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9986 8888886443 4689999999999999999999998 99999999999999999999999999997654322
Q ss_pred CCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC-ccccc-----
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS-LVSGM----- 1039 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~----- 1039 (1114)
.......++..|+|||++.+. .++.++||||+||++|+|++|+.||......+......+....... ....+
T Consensus 155 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 155 -NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred -cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 222334578899999988654 4688999999999999999999999755432221111111000000 00000
Q ss_pred ccccccCCC-----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1040 LDARLNLQD-----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1040 ~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
......... .........+.+++.+|++.||.+||+++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000 001122456789999999999999999999874
No 322
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.2e-32 Score=304.32 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=199.9
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
.|...++||+|++|.||+|..+ +++.+|+|++..... ...+.+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 4555679999999999999965 788999998854322 224567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+....... .
T Consensus 97 ~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~ 170 (285)
T cd06648 97 FLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-P 170 (285)
T ss_pred ccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC-c
Confidence 9999999999975 5689999999999999999999998 99999999999999999999999999887543222 2
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
......|++.|+|||...+..++.++||||+|+++|||++|+.||..... ....+...... .+..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~----~~~~~~~~~~~-------~~~~---- 235 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP----LQAMKRIRDNL-------PPKL---- 235 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH----HHHHHHHHhcC-------CCCC----
Confidence 22345689999999999888899999999999999999999999864322 22222211110 0000
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.........+.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 236 KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 011112346889999999999999999999985
No 323
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.7e-32 Score=302.65 Aligned_cols=248 Identities=27% Similarity=0.399 Sum_probs=199.0
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC---CCceeeEEeEEEecCceEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR---HRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~l 885 (1114)
.|+..+.||+|+||.||+|.+. +++.||+|.+...... ...+.+.+|+.+++.++ |||++++++++..+...++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD--DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc--hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4777889999999999999975 7899999998754332 22456788999998886 9999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+++++|.++++. ..+++.....++.|+++|++|||+. +++||||+|+||++++++.++++|||.+......
T Consensus 80 v~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 80 IMEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred EEecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 9999999999999874 3789999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
. .......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ..... .... ..+.+
T Consensus 155 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~~-~~~~------~~~~~ 222 (277)
T cd06917 155 S-SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF----RAMML-IPKS------KPPRL 222 (277)
T ss_pred c-cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh----hhhhc-cccC------CCCCC
Confidence 2 22334568899999998865 45788999999999999999999999654321 11110 0000 01111
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
. . ......+.+++.+||+.||++||++.|+++
T Consensus 223 ~--~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 223 E--D---NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred C--c---ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1 0 013346889999999999999999999976
No 324
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.4e-32 Score=302.94 Aligned_cols=243 Identities=25% Similarity=0.299 Sum_probs=193.4
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
||+|+||+||+|..+ +|+.||+|++.............+..|+.++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 6899999998754433223345567899999999999999999999999999999999999999
Q ss_pred HHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccccc
Q 001253 896 GELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIA 974 (1114)
Q Consensus 896 ~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 974 (1114)
.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+..... ........
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcccccc
Confidence 99987543 3689999999999999999999998 999999999999999999999999999876532 22223456
Q ss_pred ccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHH
Q 001253 975 GSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSH 1054 (1114)
Q Consensus 975 g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1114)
++..|+|||++.+..++.++||||+||++|+|++|+.||.............+. .. ... ...+...
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~---------~~~----~~~~~~~ 221 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR-TL---------EMA----VEYPDKF 221 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc-cc---------ccc----ccCCccC
Confidence 788999999998888999999999999999999999999754432221111111 00 000 1111122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHH
Q 001253 1055 MITVLKIAMLCTNISPFDRPTMRE 1078 (1114)
Q Consensus 1055 ~~~l~~li~~cl~~dP~~RPs~~e 1078 (1114)
...+.+++.+||+.||++||+++|
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCc
Confidence 446889999999999999994444
No 325
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.8e-32 Score=297.82 Aligned_cols=249 Identities=29% Similarity=0.425 Sum_probs=204.6
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..+.||+|++|.||+|..+ +++.+|+|++..... ...+.+.+|+..++.++||+++++++++..+...++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4778889999999999999986 788999999976554 235678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++++|.+++......+++..+..++.|++.|++|||.. +++||||+|+||++++++.++|+|||.+........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 9999999999986656899999999999999999999998 999999999999999999999999999987543221
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
.....++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ......... .. ...
T Consensus 154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~-~~------~~~---- 217 (253)
T cd05122 154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM----KALFKIATN-GP------PGL---- 217 (253)
T ss_pred -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH----HHHHHHHhc-CC------CCc----
Confidence 34557889999999998888999999999999999999999998754321 111111110 00 000
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.........+.+++.+||+.||++|||+.|+++
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 218 RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 011111346889999999999999999999875
No 326
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.8e-32 Score=302.39 Aligned_cols=261 Identities=23% Similarity=0.280 Sum_probs=195.2
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEec--CceEEE
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQ--GSNLLM 886 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 886 (1114)
|++.++||+|+||.||+|..+ +++.||+|+++....... ......|+..++++. |||++++++++.++ +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE--QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch--hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 567789999999999999975 689999999876543222 223446888888885 99999999999987 889999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++ ++.+.+......+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.++......
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 999975 88888876556789999999999999999999998 9999999999999999 999999999998654222
Q ss_pred CCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc-----------CC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN-----------NS 1034 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~ 1034 (1114)
......++..|+|||++.. ..++.++||||+||++|||++|..||...... +...+..+.... ..
T Consensus 154 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 154 --PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-DQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred --CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-HHHHHHHHHcCCCCHHHHHhhcccc
Confidence 2233467899999997654 55788999999999999999999999654321 111222111110 00
Q ss_pred cccccccccccC-CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1035 LVSGMLDARLNL-QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1035 ~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
............ ...........+.+++.+||+.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000000 00001123567999999999999999999999875
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.3e-32 Score=301.73 Aligned_cols=244 Identities=23% Similarity=0.238 Sum_probs=188.7
Q ss_pred eecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHH---hcCCCCceeeEEeEEEecCceEEEEecCC
Q 001253 816 VIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTL---GKIRHRNIVKLYGFCYHQGSNLLMYEYMA 891 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 891 (1114)
.||+|+||.||+|+.. +++.||+|.+.............+.+|..++ ...+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999975 6899999998765433222223334444333 34479999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccc
Q 001253 892 RGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMS 971 (1114)
Q Consensus 892 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 971 (1114)
+|+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||++....... ..
T Consensus 81 ~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~ 153 (279)
T cd05633 81 GGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PH 153 (279)
T ss_pred CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---cc
Confidence 99999998743 4689999999999999999999998 99999999999999999999999999997653221 22
Q ss_pred cccccccccCccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcc
Q 001253 972 AIAGSYGYIAPEYAY-TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEK 1050 (1114)
Q Consensus 972 ~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1114)
...|+..|+|||... +..++.++||||+||++|||++|..||....... . ..+....... . ...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~-~~~~~~~~~~-------~------~~~ 218 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-K-HEIDRMTLTV-------N------VEL 218 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC-H-HHHHHHhhcC-------C------cCC
Confidence 346899999999886 4568899999999999999999999997544322 1 1122111100 0 111
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1051 TVSHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1051 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
+......+.+++.+|++.||.+|| +++|+++
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 219 PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 222345688999999999999999 5888765
No 328
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-32 Score=328.91 Aligned_cols=269 Identities=20% Similarity=0.232 Sum_probs=190.4
Q ss_pred hcCCcCCceecccCCeEEEEEEeC--CCcEEEEEE--------------ecccCCCChhhHHHHHHHHHHHhcCCCCcee
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR--TGHTVAVKK--------------LASNREGNNNVDNSFRAEILTLGKIRHRNIV 871 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~--------------~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 871 (1114)
.++|++.++||+|+||+||+|..+ ++..+++|. +.+...........+.+|+.++++++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 478999999999999999999864 222233321 1111112223355688999999999999999
Q ss_pred eEEeEEEecCceEEEEecCCCCCHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC
Q 001253 872 KLYGFCYHQGSNLLMYEYMARGSLGELLHGAS----STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD 947 (1114)
Q Consensus 872 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 947 (1114)
++++++.+.+..|+|+|++.+ ++.+++.... ......+...++.|++.||+|||+. +|+||||||+|||++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence 999999999999999999965 7777764321 2334566778999999999999998 9999999999999999
Q ss_pred CCCeEEeeccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 001253 948 KFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR 1027 (1114)
Q Consensus 948 ~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 1027 (1114)
++.+||+|||+++.+............||+.|+|||++.+..++.++|||||||++|||++|..++........ ...+.
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~-~~~~~ 381 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP-GKQLL 381 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH-HHHHH
Confidence 99999999999987654333333456799999999999999999999999999999999998754432222111 11111
Q ss_pred HHHhcCCc-cccccc-----------ccccCCCcc------cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1028 NFIRNNSL-VSGMLD-----------ARLNLQDEK------TVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1028 ~~~~~~~~-~~~~~~-----------~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+.+..-.. ...+.+ ..+...... .......+.+++.+|+++||.+|||+.|+++
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 11111000 000000 000000000 0001234667899999999999999999986
No 329
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.1e-32 Score=304.94 Aligned_cols=251 Identities=26% Similarity=0.387 Sum_probs=204.1
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
++.|+..+.||+|++|.||+|.++ +++.||+|++..... ..+.+..|+..++.++|+|++++++++...+..++|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 456778889999999999999987 789999999975443 256688899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
+||+++++|.+++......+++..+..++.|++.||+|||+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 999999999999986555899999999999999999999998 99999999999999999999999999887553222
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
.......+++.|+|||++.+..++.++|||||||++|+|++|+.||...... ......... ... .
T Consensus 171 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~----~~~~~~~~~-~~~-----~---- 235 (286)
T cd06614 171 -SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL----RALFLITTK-GIP-----P---- 235 (286)
T ss_pred -hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhc-CCC-----C----
Confidence 1223445788999999998888999999999999999999999998643321 111111111 000 0
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..........+.+++.+||+.+|.+||++.++++
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 -LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0011112346889999999999999999999975
No 330
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.9e-32 Score=308.84 Aligned_cols=266 Identities=29% Similarity=0.396 Sum_probs=199.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--CceEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSNLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 885 (1114)
++|++.+.||+|+||+||+|.++ +|+.||+|+++...... .....+.+|+.++++++|+|++++++++... +..++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 67999999999999999999976 68999999987544322 2223456799999999999999999998765 46799
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+++ +|.+++......+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+......
T Consensus 86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999975 89998876567799999999999999999999998 9999999999999999999999999999876533
Q ss_pred CCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC--Cccccc---
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN--SLVSGM--- 1039 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~--- 1039 (1114)
. .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ...+....... ......
T Consensus 162 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 162 A-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ-LDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred c-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChhhchhhhcc
Confidence 2 22233346788999999865 4578999999999999999999999975432211 11111111100 000000
Q ss_pred -ccccccC--CCc-----ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1040 -LDARLNL--QDE-----KTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1040 -~~~~~~~--~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....... ... ........+.+++.+|+++||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000 000 00112456788999999999999999999885
No 331
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.7e-33 Score=282.43 Aligned_cols=202 Identities=26% Similarity=0.427 Sum_probs=172.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC---C--CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe-cCc
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR---T--GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH-QGS 882 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~---~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 882 (1114)
..|+..++||+|.||.||+|.-+ + .+.+|+|+++.......- ....-+|+.+++.++|||++.+..++.. +..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGi-S~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGI-SMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCc-CHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 57899999999999999999643 2 237999999877664433 3445679999999999999999999877 788
Q ss_pred eEEEEecCCCCCHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC----CCeEEe
Q 001253 883 NLLMYEYMARGSLGELLHGA----SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK----FEAHVG 954 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~ 954 (1114)
.++++||.+. +|.++++.. ...++...+..|..||+.|+.|||++ -|+|||+||.|||+..+ |.|||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence 9999999988 999988632 34788999999999999999999999 89999999999999877 899999
Q ss_pred eccCceecCCCCC--CccccccccccccCccccccCC-CCcccchHHHHHHHHHHHhCCCCCCC
Q 001253 955 DFGLAKVIDMPQS--KSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSYGVVLLELLTGRAPVQP 1015 (1114)
Q Consensus 955 DfG~a~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~p~~~ 1015 (1114)
|||+|+.+..+-. .....++-|..|+|||.+.+.+ |+.+.||||.|||+.||++-++-|..
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999998875533 2345678899999999998754 89999999999999999998877753
No 332
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.4e-32 Score=315.58 Aligned_cols=266 Identities=23% Similarity=0.306 Sum_probs=199.7
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec-----
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ----- 880 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 880 (1114)
..++|+..+.||+|+||+||+|+.. +|+.||+|++....... .....+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV-THAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccCh-hHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3478999999999999999999975 78999999986543322 2345567899999999999999999998643
Q ss_pred -CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 881 -GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 881 -~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
...|+||||+.+ +|.+.+.. .++...+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 346999999975 88888863 288999999999999999999998 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH------------
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR------------ 1027 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~------------ 1027 (1114)
+..... .......++..|+|||.+.+..++.++||||+||++|+|++|+.||...+........++
T Consensus 166 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 166 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred eeCCCC--CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 875432 223345688999999999999999999999999999999999999975442111111110
Q ss_pred ------HHHhcCCcc-----cccccccc-cCC-CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1028 ------NFIRNNSLV-----SGMLDARL-NLQ-DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1028 ------~~~~~~~~~-----~~~~~~~~-~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
......... ........ ... ..........+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 00000000 000 00011234467899999999999999999999853
No 333
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=6e-33 Score=311.96 Aligned_cols=280 Identities=25% Similarity=0.326 Sum_probs=213.9
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC------ce
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG------SN 883 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 883 (1114)
+...+.||+|+||.||+|+.+ +|+.||||.+...... ...+...+|++++++++|||||+++++-+... ..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~--r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL--RPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhccc--chHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 445668999999999999965 8999999999875533 23566788999999999999999999865443 56
Q ss_pred EEEEecCCCCCHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC--CCCC--eEEeecc
Q 001253 884 LLMYEYMARGSLGELLHGA--SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLD--DKFE--AHVGDFG 957 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~--~~~~--~kl~DfG 957 (1114)
.+|||||.||||...+.+. ...+++.+.+.+..++..||.|||++ +|+||||||.||++- ++|+ -||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 8999999999999999853 34799999999999999999999998 999999999999983 4444 6999999
Q ss_pred CceecCCCCCCccccccccccccCccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH-HHhcCCc
Q 001253 958 LAKVIDMPQSKSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRN-FIRNNSL 1035 (1114)
Q Consensus 958 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~ 1035 (1114)
.|+..+ +.......+||..|.+||+.. .+.|+..+|.|||||++|+.+||..||.+-............ ..+...-
T Consensus 170 ~Arel~--d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 170 AARELD--DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ccccCC--CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 999875 344667889999999999998 588999999999999999999999999866554332222222 2222111
Q ss_pred cccccc----------ccccCCCcccHHHHHHHHHHHhhccCCCCCCCC--CHHHHHHHHHhhhccCCCccccc
Q 001253 1036 VSGMLD----------ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRP--TMREVVLMLSESNRRQGHFEFSP 1097 (1114)
Q Consensus 1036 ~~~~~~----------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~i~~~~~~~~~~~ 1097 (1114)
...... ..+.....-.......+-.....++.++|.+|. .+.+....+.+|....-...+.-
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vvhiFs~ 321 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVVHIFSM 321 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhheeEEEee
Confidence 111111 111111112233334566778889999999999 88888888888876654444433
No 334
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.9e-32 Score=305.46 Aligned_cols=270 Identities=26% Similarity=0.352 Sum_probs=201.8
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC---
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG--- 881 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 881 (1114)
...++|++.++||+|+||+||+|..+ +|+.||+|++....... .....+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE-GFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc-CchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 45678999999999999999999986 68999999987553322 22456778999999999999999999987654
Q ss_pred -------ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEe
Q 001253 882 -------SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVG 954 (1114)
Q Consensus 882 -------~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 954 (1114)
..++|+||+++ ++.+.+......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeC
Confidence 78999999987 77777775556799999999999999999999998 99999999999999999999999
Q ss_pred eccCceecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 955 DFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 955 DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
|||.+...............++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ...+.......
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~-~~~~~~~~~~~ 237 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ-LELISRLCGSP 237 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCC
Confidence 999998764333222233456788999998764 4578899999999999999999999974332111 11122211110
Q ss_pred Ccc--cccc--------cccccCC---CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1034 SLV--SGML--------DARLNLQ---DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1034 ~~~--~~~~--------~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
... ..+. +...... ..........+.+++.+||+.||.+||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 0000 0000000 0000112356889999999999999999999875
No 335
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.6e-32 Score=300.93 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=201.8
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|+..+.||+|+||.||+|..+ +|..||+|.+....... ...+.+.+|+.+++.++|+||+++++.+...+..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 4778889999999999999976 68899999987643322 224567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC-eEEeeccCceecCCCC
Q 001253 889 YMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE-AHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-~kl~DfG~a~~~~~~~ 966 (1114)
|+++++|.+++.... ..+++..+..++.|+++|++|||+. +++|+||||+||++++++. +|++|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999999987533 3579999999999999999999998 9999999999999998864 6999999998654322
Q ss_pred CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
.......|++.|+|||+..+..++.++||||+|+++|||++|+.||.... ..+++...... .. .
T Consensus 157 -~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~-~~-----~----- 220 (257)
T cd08225 157 -ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN----LHQLVLKICQG-YF-----A----- 220 (257)
T ss_pred -ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHhcc-cC-----C-----
Confidence 22233468899999999988889999999999999999999999986432 22333322211 10 0
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.........+.+++.+||+.+|++|||+.|+++
T Consensus 221 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 221 --PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 011122346889999999999999999999975
No 336
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=285.67 Aligned_cols=256 Identities=28% Similarity=0.406 Sum_probs=200.5
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhc-CCCCceeeEEeEEEecCceEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGK-IRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv 886 (1114)
++.+....||.|+||+|+|..++ .|+..|||++..... +..++++..|.....+ -+.||||+++|++..++..++.
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiC 141 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWIC 141 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeee
Confidence 44455567999999999999977 799999999987655 3335667778876544 4789999999999999999999
Q ss_pred EecCCCCCHHHHhc----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 887 YEYMARGSLGELLH----GASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
||.|+- +++.+.+ .....+++...-.|+...+.||.||-+.. +|+|||+||+|||++..|.+||||||++..+
T Consensus 142 MELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 142 MELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred HHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhH
Confidence 999976 7776543 13457888888999999999999998764 8999999999999999999999999999865
Q ss_pred CCCCCCccccccccccccCccccc--cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccc
Q 001253 963 DMPQSKSMSAIAGSYGYIAPEYAY--TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 963 ~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
.. +...+.-+|-..|||||.+. +..|+.+|||||+|+++||+.||..||...+. ..+.+...+..
T Consensus 219 v~--SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s---vfeql~~Vv~g-------- 285 (361)
T KOG1006|consen 219 VD--SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS---VFEQLCQVVIG-------- 285 (361)
T ss_pred HH--HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH---HHHHHHHHHcC--------
Confidence 42 22233446888899999986 34589999999999999999999999975543 33333333332
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
++..-.......+....+.++|.-|+..|-.+||.+.++.+.
T Consensus 286 dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 286 DPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 222222233334566789999999999999999999988653
No 337
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3e-32 Score=299.16 Aligned_cols=247 Identities=24% Similarity=0.275 Sum_probs=191.3
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHH-HhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILT-LGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+||.||+|+.. +|+.||+|++.............+..|... ....+|+|++++++++..++..|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999975 689999999875433222223334445444 4455899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
++|.++++.. ..+++..+..++.|++.||.|+|+. +++||||+|+||++++++.++|+|||++..... ...
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~ 152 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKK 152 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----ccc
Confidence 9999999743 4688999999999999999999998 999999999999999999999999999875432 223
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..+++.|+|||...+..++.++||||+|+++|||++|..||..... .......... . .........
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~-~---------~~~~~~~~~ 218 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP----DAVFDNILSR-R---------INWPEEVKE 218 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhc-c---------cCCCCcccc
Confidence 4688899999999888889999999999999999999999964332 1222221111 0 000011111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1053 SHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1053 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
.....+.+++.+||+.+|++||++.++.+.+.
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 23356889999999999999998876655443
No 338
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.7e-32 Score=303.36 Aligned_cols=255 Identities=24% Similarity=0.391 Sum_probs=196.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 886 (1114)
++|+..++||+|+||+||++... +++.||+|++...... .....+.+|+..+.++. ||||+++++++..++..+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 45666778999999999999976 6899999998754433 33566888999999996 99999999999999999999
Q ss_pred EecCCCCCHHHHhc----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 887 YEYMARGSLGELLH----GASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
|||++. ++.++.. .....+++..+..++.+++.||+|||+.. +++||||||+||+++.++.++|+|||+++..
T Consensus 82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 999875 6655432 12357899999999999999999999732 8999999999999999999999999999765
Q ss_pred CCCCCCccccccccccccCccccccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 963 DMPQSKSMSAIAGSYGYIAPEYAYTM---KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 963 ~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
.... ......|+..|+|||++.+. .++.++||||+||++|||++|+.||.... .....+.......
T Consensus 159 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~~~~~~~~~------ 227 (288)
T cd06616 159 VDSI--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN---SVFDQLTQVVKGD------ 227 (288)
T ss_pred ccCC--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc---hHHHHHhhhcCCC------
Confidence 3222 22334688899999998766 68899999999999999999999996433 1122222211110
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
.+.+. ..........+.+++.+||+.||++|||+.+|++.
T Consensus 228 -~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 -PPILS--NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CCcCC--CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111 11112234568899999999999999999998763
No 339
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.9e-32 Score=306.83 Aligned_cols=268 Identities=22% Similarity=0.314 Sum_probs=197.6
Q ss_pred CCcCCceecccCCeEEEEEEeC---CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--CceE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR---TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSNL 884 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 884 (1114)
+|++.++||+|+||.||+|..+ +++.||+|.+...........+.+.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778889999999999999975 4789999999875432233345677899999999999999999999988 7899
Q ss_pred EEEecCCCCCHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC----CCCeEEeec
Q 001253 885 LMYEYMARGSLGELLHGA----SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD----KFEAHVGDF 956 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~----~~~~kl~Df 956 (1114)
+||||+++ ++.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 677666422 23688999999999999999999998 9999999999999999 999999999
Q ss_pred cCceecCCCCC--CccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCC-----HHHHHHH
Q 001253 957 GLAKVIDMPQS--KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGD-----LVTWVRN 1028 (1114)
Q Consensus 957 G~a~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~-----~~~~~~~ 1028 (1114)
|++........ .......++..|+|||++.+. .++.++|||||||++|||++|+.||........ ....+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986543322 122345688999999988764 578999999999999999999999975443220 0000000
Q ss_pred HHh---------------cCCccccc-ccccccCCCccc-------HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1029 FIR---------------NNSLVSGM-LDARLNLQDEKT-------VSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1029 ~~~---------------~~~~~~~~-~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.+. ...+.... ............ ......+.+++.+|+++||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 00000000 000000000000 022346889999999999999999999875
No 340
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=7.1e-32 Score=301.38 Aligned_cols=261 Identities=19% Similarity=0.259 Sum_probs=188.8
Q ss_pred HhcCCcCCceecccCCeEEEEEEeCC----CcEEEEEEecccCCCChhh--------HHHHHHHHHHHhcCCCCceeeEE
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLRT----GHTVAVKKLASNREGNNNV--------DNSFRAEILTLGKIRHRNIVKLY 874 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~ 874 (1114)
..++|++.++||+|+||+||+|.+.+ +..+|+|+........... ......+...+..++|+++++++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 34689999999999999999999764 3456666543222211000 01112233455677899999999
Q ss_pred eEEEecC----ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC
Q 001253 875 GFCYHQG----SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE 950 (1114)
Q Consensus 875 ~~~~~~~----~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 950 (1114)
+++.... ..++++|++.. ++.+.++. ....++..+..++.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKLVE-NTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNR 164 (294)
T ss_pred EeeeEecCCceEEEEEEehhcc-CHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCc
Confidence 9876543 34688888755 67777653 23457888899999999999999998 9999999999999999999
Q ss_pred eEEeeccCceecCCCCC------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHH
Q 001253 951 AHVGDFGLAKVIDMPQS------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVT 1024 (1114)
Q Consensus 951 ~kl~DfG~a~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~ 1024 (1114)
++|+|||+|+.+..... .......||+.|+|||+..+..++.++||||+||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999986532211 112234699999999999999999999999999999999999999986644333322
Q ss_pred HHH-HHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1025 WVR-NFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1025 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
..+ +++.. +....... ......+.+++..|++.+|++||++.++++.+
T Consensus 245 ~~~~~~~~~------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAKCDFIKR------LHEGKIKI-----KNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhHHHHHHH------hhhhhhcc-----CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 221 11111 00111110 11135688999999999999999999999876
No 341
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.3e-32 Score=304.73 Aligned_cols=252 Identities=26% Similarity=0.372 Sum_probs=200.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
..|+..+.||+|+||+||+|+.+ +++.+|+|.+...........+++.+|+.+++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 44777788999999999999976 67899999987544333344566788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
||+. |++.+++......+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 9997 588888765556789999999999999999999998 9999999999999999999999999998765321
Q ss_pred CccccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
....+++.|+|||.+. ...++.++|||||||++|||++|+.||....... ........ .. +
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~-~~------~-- 232 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQN-ES------P-- 232 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH----HHHHHhhc-CC------C--
Confidence 2346888999999874 3457889999999999999999999986433211 11111111 00 0
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
..........+.+++.+||+.+|++||++.++++.-..
T Consensus 233 ---~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 233 ---ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred ---CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 00111233467899999999999999999999876443
No 342
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5e-33 Score=327.88 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=192.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe-------
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH------- 879 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 879 (1114)
..+|+....||+||||.||+++.+ ||+.||||++.-.. .......+.+|+..+++++|||||+++..+.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 367888889999999999999988 89999999998765 33445668889999999999999988652100
Q ss_pred ------------------------------------------------c-------------------------------
Q 001253 880 ------------------------------------------------Q------------------------------- 880 (1114)
Q Consensus 880 ------------------------------------------------~------------------------------- 880 (1114)
.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred ---------------------------------CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001253 881 ---------------------------------GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHH 927 (1114)
Q Consensus 881 ---------------------------------~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~ 927 (1114)
...|+-||||+..++.++++++...-.....++++++|++||+|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 11378899999988888887443322577888999999999999999
Q ss_pred CCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC-----------------CCCCCccccccccccccCccccccC--
Q 001253 928 DCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID-----------------MPQSKSMSAIAGSYGYIAPEYAYTM-- 988 (1114)
Q Consensus 928 ~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~-----------------~~~~~~~~~~~g~~~y~aPE~~~~~-- 988 (1114)
+ |||||||||.||+++++..|||+|||+|.... .+.....+..+||.-|+|||++.+.
T Consensus 716 ~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 Q---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred C---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 9 99999999999999999999999999998621 0111234567899999999998754
Q ss_pred -CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccC
Q 001253 989 -KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTN 1067 (1114)
Q Consensus 989 -~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 1067 (1114)
+|+.|+||||+||+++||+. ||....+ .+..+.. ++ ++.+.............=.++|+++++
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~y---PF~TsME---Ra~iL~~-LR---------~g~iP~~~~f~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLY---PFGTSME---RASILTN-LR---------KGSIPEPADFFDPEHPEEASLIRWLLS 856 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhc---cCCchHH---HHHHHHh-cc---------cCCCCCCcccccccchHHHHHHHHHhc
Confidence 49999999999999999985 4643322 1112221 12 222332222233344455689999999
Q ss_pred CCCCCCCCHHHHHH
Q 001253 1068 ISPFDRPTMREVVL 1081 (1114)
Q Consensus 1068 ~dP~~RPs~~evl~ 1081 (1114)
.||.+||||.|++.
T Consensus 857 hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 857 HDPSKRPTATELLN 870 (1351)
T ss_pred CCCccCCCHHHHhh
Confidence 99999999999875
No 343
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-32 Score=304.94 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=208.5
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
...|.+.+.||+|.|++|..|++. ++..||||.+.+..-.... .+.+.+|++++..+.|||||+++.+.+.+...|+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 356888999999999999999976 7999999999887765443 34488899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+.+|.+++++...+ ...+.....++.|+.+|++|+|++ .|||||||++||+++.+.++||+|||++..+. .
T Consensus 134 ~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--~ 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD--Y 207 (596)
T ss_pred EEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec--c
Confidence 99999999999998554 455588889999999999999999 99999999999999999999999999999876 4
Q ss_pred CCccccccccccccCccccccCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYAYTMKVT-EKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
.....+++|++.|.|||++.+..|+ +.+|+||+|+++|-++.|.-||++..-.+- +. ..+...++
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-----r~---------rvl~gk~r 273 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-----RP---------RVLRGKYR 273 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-----cc---------hheeeeec
Confidence 5566788999999999999988865 689999999999999999999975432111 10 01111111
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1083 (1114)
. +.....+.-+++++++-.+|.+|++.+++.+.-
T Consensus 274 I----p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 274 I----PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred c----cceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 1 111223456789999999999999999987654
No 344
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.6e-32 Score=302.56 Aligned_cols=258 Identities=23% Similarity=0.238 Sum_probs=203.9
Q ss_pred CCcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCC-CChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCce
Q 001253 810 NFDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNRE-GNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 883 (1114)
+|++.+.||+|+||.||+|+.. +++.||||+++.... ......+.+..|+.++.++ +||+|+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4778889999999999999853 578899999875432 1222345678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++++|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 999999999999999874 34688999999999999999999998 99999999999999999999999999988654
Q ss_pred CCCCCccccccccccccCccccccCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTMK--VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
...........|+..|+|||...+.. .+.++||||+|+++|||++|..||.............+......
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------- 228 (288)
T cd05583 157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK-------- 228 (288)
T ss_pred cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC--------
Confidence 33322233456889999999987655 78899999999999999999999964332222223323222211
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHh
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSE 1085 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1085 (1114)
...+......+.+++.+||+.||++|||+.++.+.|+.
T Consensus 229 ------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 ------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 01111123467889999999999999999988887765
No 345
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.5e-32 Score=302.89 Aligned_cols=264 Identities=23% Similarity=0.339 Sum_probs=196.9
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.+.||+|++|+||+|+++ +|+.||+|++...... ....+.+.+|++++++++||||+++++++.++...++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 46888999999999999999976 7899999998654332 223456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-CCCeEEeeccCceecCCC
Q 001253 888 EYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD-KFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG~a~~~~~~ 965 (1114)
||+++ ++.+++.... ...++..+..++.|++.||+|||+. +++||||+|+||+++. ++.+||+|||++......
T Consensus 81 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 81 EYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 99965 7888775433 3468888889999999999999998 9999999999999985 557999999999765432
Q ss_pred CCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc---
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD--- 1041 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 1041 (1114)
........+++.|+|||++.+ ..++.++||||+||++|+|++|+.||......+........ ... . ....++
T Consensus 157 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~ 232 (294)
T PLN00009 157 -VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI-LGT-P-NEETWPGVT 232 (294)
T ss_pred -ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCC-C-Chhhccccc
Confidence 122233467889999998866 45788999999999999999999999754332211111110 000 0 000000
Q ss_pred -------ccccCCCc----ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 -------ARLNLQDE----KTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 -------~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
........ ........+.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 01122345789999999999999999999986
No 346
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.3e-31 Score=302.14 Aligned_cols=246 Identities=27% Similarity=0.394 Sum_probs=197.7
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|...++||+|+||+||+|+.. +|+.||+|++...........+.+..|+.+++.++|||++++++++.+....|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 666678999999999999975 6889999999765554444456788899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS 969 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 969 (1114)
+.+ ++.+++......+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+.... .
T Consensus 103 ~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-----~ 173 (313)
T cd06633 103 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSS-----P 173 (313)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccC-----C
Confidence 964 88888876666789999999999999999999998 99999999999999999999999999886432 1
Q ss_pred cccccccccccCccccc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccC
Q 001253 970 MSAIAGSYGYIAPEYAY---TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNL 1046 (1114)
Q Consensus 970 ~~~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1114)
.....|+..|+|||++. ...++.++|||||||++|||++|..||...... ........... +.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~~~~-------~~--- 239 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNDS-------PT--- 239 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhcCC-------CC---
Confidence 23456889999999974 456888999999999999999999998654321 11221111100 00
Q ss_pred CCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1047 QDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1047 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.........+.+++.+||+.+|++||++.++++
T Consensus 240 --~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 240 --LQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred --CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001112235788999999999999999999885
No 347
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.9e-32 Score=300.57 Aligned_cols=254 Identities=24% Similarity=0.261 Sum_probs=199.6
Q ss_pred CCcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCCC-ChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCce
Q 001253 810 NFDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNREG-NNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 883 (1114)
+|++.+.||+|+||.||+|+.. +|+.||+|++...... .....+.+..|+.+++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4778899999999999999863 6899999998754322 222345678899999999 589999999999999999
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|+||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||++++++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 9999999999999999743 4688999999999999999999998 99999999999999999999999999998754
Q ss_pred CCCCCccccccccccccCccccccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTM--KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
...........|+..|+|||.+.+. .++.++||||+|+++|+|++|+.||.............+.......
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~------- 229 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP------- 229 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC-------
Confidence 3333333345688999999998753 4678999999999999999999999644333333333322211110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
..+......+.+++.+||+.||++|| ++.+++.
T Consensus 230 -------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 230 -------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11112234678999999999999997 5565543
No 348
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.2e-32 Score=301.10 Aligned_cols=248 Identities=26% Similarity=0.347 Sum_probs=199.8
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
||+|+||.||+|++. +|+.||+|++...........+.+.+|++.+++++||||+++++.+..+...|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999987 5999999999766544444567788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-------C
Q 001253 896 GELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS-------K 968 (1114)
Q Consensus 896 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~-------~ 968 (1114)
.++++... .+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99997543 789999999999999999999998 999999999999999999999999999875432211 1
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
......++..|+|||...+..++.++||||||+++||+++|..||..... ......... .. .. .
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~-~~---------~~--~ 220 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP----EEIFQNILN-GK---------IE--W 220 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhc-CC---------cC--C
Confidence 22345688899999999888899999999999999999999999964432 222222111 10 00 0
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
.........+.+++.+||+.+|.+|||+.++.+.++
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 001112456889999999999999999966666555
No 349
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.98 E-value=2.6e-32 Score=311.33 Aligned_cols=270 Identities=23% Similarity=0.342 Sum_probs=199.9
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG----- 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 881 (1114)
.++|++.++||+|+||+||+|++. +|+.||+|++..... ......+.+|+.++++++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH--QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 468999999999999999999975 789999999864322 223456778999999999999999999876543
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..|+|+||+++ ++.+++. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 82 ~~~lv~e~~~~-~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 82 DVYIVQELMET-DLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred eEEEEehhccc-CHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence 47999999975 8888886 34689999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCC--CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc--c
Q 001253 962 IDMPQS--KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL--V 1036 (1114)
Q Consensus 962 ~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 1036 (1114)
...... .......|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||...+... ....+......... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLILGVLGTPSQEDL 234 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHH
Confidence 543221 11233568999999998754 468899999999999999999999996533211 11111111111000 0
Q ss_pred ccccc-------ccccCCCcc-----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 001253 1037 SGMLD-------ARLNLQDEK-----TVSHMITVLKIAMLCTNISPFDRPTMREVVLM--LSES 1086 (1114)
Q Consensus 1037 ~~~~~-------~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 1086 (1114)
..+.+ ......... .......+.+++.+||+.||++|||+.|+++. ++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 00000 000000000 01124568899999999999999999999876 5544
No 350
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-33 Score=294.54 Aligned_cols=273 Identities=22% Similarity=0.272 Sum_probs=213.9
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCce
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 883 (1114)
+...+|....+||+|+||.|-+|..+ +.+.||||+++++.....+..+--..|-++++.. +-|.+++++.+|+.-++.
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 44567999999999999999999977 5788999999887654333233334577777766 568999999999999999
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|+||||+.||+|--.+++. +.+.+..+...|..||-||-+||++ ||++||+|.+|||++.+|++||+|||+++.-
T Consensus 426 yFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn- 500 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN- 500 (683)
T ss_pred eeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccc-
Confidence 9999999999999888744 4677888888999999999999999 9999999999999999999999999999852
Q ss_pred CCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
.-......+++|||.|+|||++...+|+.++|.|||||++|||+.|++||++.++.+ +.+.+.+ .
T Consensus 501 i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e-lF~aI~e-------------h- 565 (683)
T KOG0696|consen 501 IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-LFQAIME-------------H- 565 (683)
T ss_pred ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHH-------------c-
Confidence 234455678999999999999999999999999999999999999999998655422 2222221 1
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCCCCcccc
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDHDSDQKL 1106 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~~~ 1106 (1114)
....+...+.+...++...+...|.+|...-- +.-+....+.++..+||+.-...
T Consensus 566 ---nvsyPKslSkEAv~ickg~ltK~P~kRLGcg~-----~ge~di~~H~FFR~iDWek~E~~ 620 (683)
T KOG0696|consen 566 ---NVSYPKSLSKEAVAICKGLLTKHPGKRLGCGP-----EGERDIREHPFFRRIDWEKLERR 620 (683)
T ss_pred ---cCcCcccccHHHHHHHHHHhhcCCccccCCCC-----ccccchhhCcchhhccHHHHhhc
Confidence 12234445567888999999999999954321 11123334566777777654433
No 351
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.98 E-value=2.4e-31 Score=291.80 Aligned_cols=252 Identities=28% Similarity=0.404 Sum_probs=206.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--CceEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSNLLM 886 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 886 (1114)
+|+..+.||+|++|.||+|..+ +++.|++|++...... ....+.+.+|+..+++++||||+++++.+.+. ...++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 4777889999999999999987 7899999998765532 34467788999999999999999999999988 889999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 99999999999998544 889999999999999999999998 99999999999999999999999999998765332
Q ss_pred CC-ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 967 SK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 967 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
.. ......++..|+|||...+..++.++||||+|+++|+|++|+.||.... +........... ..
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~-~~---------- 221 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG---NPMAALYKIGSS-GE---------- 221 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---chHHHHHhcccc-CC----------
Confidence 21 1234568899999999988889999999999999999999999997554 111111111100 00
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....+......+.+++.+|++.+|.+||++.|++.
T Consensus 222 -~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 222 -PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 01112222457889999999999999999999875
No 352
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=5.5e-32 Score=301.20 Aligned_cols=264 Identities=24% Similarity=0.326 Sum_probs=202.7
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|++.+.||+|++|.||+|... +++.+|+|++...... ......+..|+.++++++|+||+++++++.+++..++||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 567789999999999999975 7899999998765433 23356778899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS 969 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 969 (1114)
+++ ++.+++......+++.++..++.|+++|++|||+. +++|+||+|+||++++++.++|+|||.+....... ..
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~ 154 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RP 154 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-cc
Confidence 976 88888876556899999999999999999999998 99999999999999999999999999998765332 22
Q ss_pred cccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC--cccccc------
Q 001253 970 MSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS--LVSGML------ 1040 (1114)
Q Consensus 970 ~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------ 1040 (1114)
.....++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+.... +.+...... ......
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK-IFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHcCCCchHhcccchhhhhhh
Confidence 2334678899999998776 789999999999999999999999965442211111 111100000 000000
Q ss_pred -----cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1041 -----DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1041 -----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.................+.+++.+||++||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000000111223467899999999999999999999875
No 353
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.98 E-value=8.2e-32 Score=295.23 Aligned_cols=250 Identities=24% Similarity=0.379 Sum_probs=206.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|++.+.||+|+||.||++.+. +++.||+|++...... ....+.+.+|+++++.++|||++++.+.+..++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 4788899999999999999976 6899999999765442 2335678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 889 YMARGSLGELLHGA---SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|+++++|.+++... ...+++..+..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 99999999999754 36899999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
. .......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ............ . .
T Consensus 157 ~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~~~~~~~-~-----~---- 221 (258)
T cd08215 157 V-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN----LLELALKILKGQ-Y-----P---- 221 (258)
T ss_pred c-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc----HHHHHHHHhcCC-C-----C----
Confidence 2 22334578899999999988889999999999999999999999986443 222222222211 0 0
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+......+.+++.+||+.+|++|||+.|+++
T Consensus 222 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 ---PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011122346889999999999999999999875
No 354
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=1e-32 Score=257.35 Aligned_cols=263 Identities=24% Similarity=0.337 Sum_probs=200.1
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|...++||+|.||+||+|+.+ +++.||+|++.-+..+. .......+|+-+++.++|.|||+++++...+....+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde-gvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC-CCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 4666778999999999999955 78999999998665543 334456689999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
||.. +|..+.....+.++.+....++.|+++|+.|+|++ ++.|||+||.|.+++.+|++|++|||+|+.++.+. .
T Consensus 82 ~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv-r 156 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-R 156 (292)
T ss_pred HhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce-E
Confidence 9977 99999988888999999999999999999999999 99999999999999999999999999999887554 3
Q ss_pred ccccccccccccCccccccCC-CCcccchHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHhcCCcccccccc----
Q 001253 969 SMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSYGVVLLELLTG-RAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDA---- 1042 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 1042 (1114)
.....+-|..|++|+++.+.+ |+...|+||.||++.|+... ++.|++.+..+.+.+.++. + +...+.-+..
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~-l--g~p~ed~wps~t~l 233 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL-L--GTPTEDQWPSMTKL 233 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHH-h--CCCccccCCccccC
Confidence 345567899999999999866 88899999999999999984 4445543332222222221 1 1111111111
Q ss_pred -cccCCCccc---------HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1043 -RLNLQDEKT---------VSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1043 -~~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.+...+..+ +.....=.+++.+.+.-+|.+|.++++.++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 111111111 111123345666777778999999987654
No 355
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=3.5e-32 Score=304.70 Aligned_cols=254 Identities=24% Similarity=0.399 Sum_probs=196.3
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 885 (1114)
.++|++.++||+|+||+||+|.++ +++.||||+++..... .....+..|+.++.+. .||||+++++++.++...|+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 367888999999999999999987 4899999999754332 2234455677666666 59999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
||||+++ ++.+++......+++..+..++.|++.|++|||+. .+++||||+|+||++++++.+||+|||++..+...
T Consensus 92 v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 92 CMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred EeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9999865 88888775556889999999999999999999973 18999999999999999999999999999765422
Q ss_pred CCCccccccccccccCccccccCC----CCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMK----VTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
. ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+..........
T Consensus 169 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~------- 236 (296)
T cd06618 169 K--AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---FEVLTKILQEEP------- 236 (296)
T ss_pred C--cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---HHHHHHHhcCCC-------
Confidence 2 222335788999999987554 788999999999999999999999643221 122222121110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
+... ........+.+++.+||+.||++||++.++++.
T Consensus 237 ~~~~----~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 237 PSLP----PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 001123468899999999999999999999865
No 356
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.98 E-value=6.9e-32 Score=302.37 Aligned_cols=264 Identities=20% Similarity=0.280 Sum_probs=196.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCc----
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGS---- 882 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~---- 882 (1114)
++|++.+.||+|+||+||+|++. +++.||+|++....... .....+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-GIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-CCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 46888999999999999999976 68999999986543322 22356778999999995 6999999999987665
Q ss_pred -eEEEEecCCCCCHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-CCCeEEeec
Q 001253 883 -NLLMYEYMARGSLGELLHGA----SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD-KFEAHVGDF 956 (1114)
Q Consensus 883 -~~lv~E~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Df 956 (1114)
.|+||||+++ ++.+++... ...+++..+..++.|++.||+|||+. +++||||+|+||+++. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999986 888887632 23589999999999999999999998 9999999999999998 889999999
Q ss_pred cCceecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc
Q 001253 957 GLAKVIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL 1035 (1114)
Q Consensus 957 G~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1114)
|.++.+..+.. ......+++.|+|||++.+ ..++.++||||||+++|+|++|..||.............+. ....
T Consensus 156 g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~-- 231 (295)
T cd07837 156 GLGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKL-LGTP-- 231 (295)
T ss_pred ccceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH-hCCC--
Confidence 99986543221 2223357888999998865 45789999999999999999999999754322111111110 0000
Q ss_pred ccccccc-----c---ccC-CC----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1036 VSGMLDA-----R---LNL-QD----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1036 ~~~~~~~-----~---~~~-~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....... . ... .. .........+.++|.+||++||.+||+++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000 0 000 00 001123456889999999999999999999874
No 357
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=1.4e-31 Score=294.53 Aligned_cols=252 Identities=25% Similarity=0.345 Sum_probs=199.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCC--CChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec--Cce
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNRE--GNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ--GSN 883 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 883 (1114)
.+|++.+.||+|+||.||+|+.+ +++.||+|++..... ........+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46889999999999999999975 689999998754321 2233456788999999999999999999998764 457
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++++|.+++... ..+++.....++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 8999999999999998743 3578999999999999999999998 99999999999999999999999999998653
Q ss_pred CCC--CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccc
Q 001253 964 MPQ--SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLD 1041 (1114)
Q Consensus 964 ~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1114)
... ........++..|+|||.+.+..++.++|||||||++||+++|+.||..... ...+.......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~-------- 225 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAIFKIATQP-------- 225 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHHHHHHcCC--------
Confidence 211 1122345688999999999988899999999999999999999999964322 11122211110
Q ss_pred ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.....+......+.+++.+|++ +|.+||++.+++.
T Consensus 226 ----~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 ----TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0011222334568899999999 5799999998764
No 358
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=5.9e-32 Score=308.86 Aligned_cols=280 Identities=24% Similarity=0.342 Sum_probs=206.2
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC----
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG---- 881 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 881 (1114)
..++|++.+.||+|+||+||+|... +|+.||||++..... .......+.+|+.++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 4578999999999999999999965 789999999865432 2223456778999999999999999999987654
Q ss_pred --ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 882 --SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 882 --~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
..++||||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||++
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 358999999 6699988863 4689999999999999999999998 9999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc-c-
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL-V- 1036 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~- 1036 (1114)
..... ......+++.|+|||.+.+ ..++.++||||+|+++|++++|+.||....... ...+....... .
T Consensus 166 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~ 237 (343)
T cd07880 166 RQTDS----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD----QLMEIMKVTGTPSK 237 (343)
T ss_pred ccccc----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCCH
Confidence 86432 1233467889999998875 458889999999999999999999997543211 11111110000 0
Q ss_pred ---ccc--------ccccccCCC----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHH--HHHHhhhccCCCcccccCC
Q 001253 1037 ---SGM--------LDARLNLQD----EKTVSHMITVLKIAMLCTNISPFDRPTMREVV--LMLSESNRRQGHFEFSPMD 1099 (1114)
Q Consensus 1037 ---~~~--------~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl--~~L~~i~~~~~~~~~~~~~ 1099 (1114)
..+ ......... .........+.+++.+|++.||++|||+.+++ ..++...........++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETEAPPYD 317 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccccCCCCcc
Confidence 000 000000000 00011234578999999999999999999998 5566554444444444444
Q ss_pred CC
Q 001253 1100 HD 1101 (1114)
Q Consensus 1100 ~~ 1101 (1114)
.+
T Consensus 318 ~~ 319 (343)
T cd07880 318 DS 319 (343)
T ss_pred cc
Confidence 33
No 359
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=1.5e-31 Score=292.50 Aligned_cols=249 Identities=28% Similarity=0.429 Sum_probs=204.0
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|++.+.||+|++|.||+|+.+ +++.||+|.+...... ....+.+.+|++++++++|||++++++++.++...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 4778899999999999999976 6789999999866543 2345678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
|+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 80 YAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred cCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 99999999999744 5789999999999999999999998 999999999999999999999999999987643222
Q ss_pred ccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCC
Q 001253 969 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQD 1048 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1114)
......++..|+|||...+..++.++||||+|+++|+|++|+.||..... .....+ .... . . .
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---~~~~~~-~~~~-~------~------~ 217 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---MAALFR-IVQD-D------H------P 217 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---HHHHHH-Hhcc-C------C------C
Confidence 22345688999999999888889999999999999999999999874432 111111 1110 0 0 0
Q ss_pred cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1049 EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1049 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+......+.+++.+|++.+|++||++.+++.
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 111122346789999999999999999999874
No 360
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=1.8e-31 Score=297.73 Aligned_cols=264 Identities=24% Similarity=0.321 Sum_probs=196.8
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC---CCCceeeEEeEEEecCc----
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI---RHRNIVKLYGFCYHQGS---- 882 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~---- 882 (1114)
|++.+.||+|+||.||+|+++ +++.||+|+++...... .....+..|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 567889999999999999987 58999999997554422 2234556677766655 69999999999988776
Q ss_pred -eEEEEecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCce
Q 001253 883 -NLLMYEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 883 -~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 960 (1114)
.+++|||+.+ +|.+++.... ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.+||+|||.+.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcce
Confidence 8999999975 8998887543 3689999999999999999999998 99999999999999999999999999998
Q ss_pred ecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC--Ccccc
Q 001253 961 VIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN--SLVSG 1038 (1114)
Q Consensus 961 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 1038 (1114)
..... .......++..|+|||++.+..++.++|||||||++|||++|+.||......+....+........ .+...
T Consensus 156 ~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 156 IYSFE--MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eccCC--cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 76432 222334578899999999999999999999999999999999999875433222222211100000 00000
Q ss_pred c------ccccc-cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1039 M------LDARL-NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1039 ~------~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
. ..... .............+.+++.+||+.||.+||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 00000 0000111223456789999999999999999999874
No 361
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=1.6e-31 Score=296.24 Aligned_cols=244 Identities=23% Similarity=0.223 Sum_probs=188.4
Q ss_pred eecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHH---HHHhcCCCCceeeEEeEEEecCceEEEEecCC
Q 001253 816 VIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEI---LTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMA 891 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 891 (1114)
.||+|+||+||+|+.. +++.||+|++.............+..|. ..++...||+|+++++++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999975 6899999998765432222122233333 34455679999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccc
Q 001253 892 RGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMS 971 (1114)
Q Consensus 892 ~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 971 (1114)
||+|.+++.. ...+++.++..++.|+++|++|||+. +++||||||+||+++.++.++|+|||++...... ...
T Consensus 81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---~~~ 153 (278)
T cd05606 81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPH 153 (278)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---CCc
Confidence 9999998874 45799999999999999999999998 9999999999999999999999999998755322 123
Q ss_pred cccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcc
Q 001253 972 AIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEK 1050 (1114)
Q Consensus 972 ~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1114)
...|+..|+|||.+.+. .++.++||||+||++|||++|+.||........ .. +....... . ...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-~~-~~~~~~~~-------~------~~~ 218 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HE-IDRMTLTM-------A------VEL 218 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-HH-HHHHhhcc-------C------CCC
Confidence 44789999999998744 688999999999999999999999975432221 11 11111100 0 011
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 001253 1051 TVSHMITVLKIAMLCTNISPFDRP-----TMREVVL 1081 (1114)
Q Consensus 1051 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1081 (1114)
+......+.+++.+|++.+|.+|| ++.++++
T Consensus 219 ~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 111235688999999999999999 8998874
No 362
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=3.4e-32 Score=302.40 Aligned_cols=250 Identities=25% Similarity=0.373 Sum_probs=204.6
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 886 (1114)
++|.+.+.||+|+||.||+|+.+ +|+.||+|++...........+.+..|+.++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999976 78999999997654444444567888999999998 99999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 9999999999999754 4799999999999999999999998 99999999999999999999999999998654322
Q ss_pred C-------------------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 001253 967 S-------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR 1027 (1114)
Q Consensus 967 ~-------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 1027 (1114)
. .......++..|+|||...+..++.++||||+|++++++++|+.||..... ....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~ 232 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE----YLTFQ 232 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH----HHHHH
Confidence 1 222345678999999999888899999999999999999999999975442 11122
Q ss_pred HHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCH----HHHH
Q 001253 1028 NFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTM----REVV 1080 (1114)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl 1080 (1114)
..... . ...+......+.+++.+||+.+|++||++ ++++
T Consensus 233 ~~~~~----------~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll 275 (280)
T cd05581 233 KILKL----------E----YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELK 275 (280)
T ss_pred HHHhc----------C----CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHh
Confidence 21111 0 01111223468899999999999999999 6655
No 363
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.98 E-value=6.7e-32 Score=308.21 Aligned_cols=267 Identities=25% Similarity=0.350 Sum_probs=198.5
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEec--Cce
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQ--GSN 883 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 883 (1114)
.++|++.+.||+|+||.||+|.++ +|+.||+|++....... .....+.+|+.+++++ +||||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-TDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-hhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 467888999999999999999976 68899999986543222 2234567899999999 999999999998654 357
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+++ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 85 ~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 999999975 999998743 788999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCC----CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc------
Q 001253 964 MPQS----KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN------ 1032 (1114)
Q Consensus 964 ~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~------ 1032 (1114)
.... .......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||............ ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKI-IEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HHHhCCCCHHHH
Confidence 3221 12234568999999998765 45788999999999999999999999654322111111 000000
Q ss_pred ----CCccccccc----ccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1033 ----NSLVSGMLD----ARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1033 ----~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
......+.+ ................+.+++.+||+.||++|||+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000000 00000000111134568899999999999999999999864
No 364
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=1.2e-31 Score=302.71 Aligned_cols=265 Identities=21% Similarity=0.340 Sum_probs=197.1
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC------
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG------ 881 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 881 (1114)
++|++.++||+|+||.||+|+.+ +++.||||++....... .....+.+|+.++++++||||+++++++...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 57999999999999999999976 68999999986543322 22334567999999999999999999987654
Q ss_pred --ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 882 --SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 882 --~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
..++||||+++ ++.+++......+++.++..++.|+++||+|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 34999999975 88888876656789999999999999999999998 9999999999999999999999999999
Q ss_pred eecCCCCC---CccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc
Q 001253 960 KVIDMPQS---KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL 1035 (1114)
Q Consensus 960 ~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1114)
........ .......++..|+|||.+.+. .++.++||||+|+++|||++|+.||..... ......+...... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~-~~~~~~~~~~~~~--~ 243 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE-QHQLTLISQLCGS--I 243 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCC--C
Confidence 86543221 122334678899999988664 378899999999999999999999865332 1111222221110 0
Q ss_pred ccccccc--------cccCCCcc---------cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1036 VSGMLDA--------RLNLQDEK---------TVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1036 ~~~~~~~--------~~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+... ........ .......+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000000 00000000 0001235678999999999999999999874
No 365
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.98 E-value=1.3e-31 Score=304.35 Aligned_cols=256 Identities=24% Similarity=0.299 Sum_probs=192.9
Q ss_pred eeccc--CCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 816 VIGRG--ACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 816 ~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
.||+| +||+||+|++. +|+.||+|++....... ...+.+++|+.+++.++||||+++++++..++..++||||+.+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 46666 99999999975 79999999987554332 3346788999999999999999999999999999999999999
Q ss_pred CCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCC---
Q 001253 893 GSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSK--- 968 (1114)
Q Consensus 893 gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--- 968 (1114)
+++.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999998754 23689999999999999999999998 9999999999999999999999999865432111100
Q ss_pred ---ccccccccccccCccccccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc--------
Q 001253 969 ---SMSAIAGSYGYIAPEYAYTM--KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL-------- 1035 (1114)
Q Consensus 969 ---~~~~~~g~~~y~aPE~~~~~--~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 1035 (1114)
......++..|+|||++.+. .++.++||||+||++|||++|+.||............. ....+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 236 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKL----KGPPYSPLDITTF 236 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHh----cCCCCCCcccccc
Confidence 01112356679999998763 47889999999999999999999997544221111111 00000
Q ss_pred --------------c----c---------ccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1036 --------------V----S---------GMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1036 --------------~----~---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
. + .+.... ............+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSER--LRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred chhhhhhccchhhhhcccccchhcccccccccccc--ccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 0 000000 011122345567899999999999999999999974
No 366
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.98 E-value=8.7e-32 Score=300.19 Aligned_cols=243 Identities=23% Similarity=0.378 Sum_probs=195.4
Q ss_pred ceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCC
Q 001253 815 FVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARG 893 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 893 (1114)
.+||+|+||.||+|..+ +++.||+|++..... .....+.+|+.+++.++|+|++++++++...+..++||||++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccch---hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 57999999999999975 789999998753322 23566888999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccc
Q 001253 894 SLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAI 973 (1114)
Q Consensus 894 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 973 (1114)
+|.+++.. ..+++.....++.|++.|++|+|+. +++||||+|+||++++++.++|+|||.+....... ......
T Consensus 103 ~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~ 176 (292)
T cd06657 103 ALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSL 176 (292)
T ss_pred cHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc-cccccc
Confidence 99998863 3578999999999999999999998 99999999999999999999999999987653222 222345
Q ss_pred cccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHH
Q 001253 974 AGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVS 1053 (1114)
Q Consensus 974 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1114)
.|++.|+|||.+.+..++.++||||+|+++|+|++|..||..... .......... ...... ....
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~----~~~~~~~~~~-------~~~~~~----~~~~ 241 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP----LKAMKMIRDN-------LPPKLK----NLHK 241 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhh-------CCcccC----Cccc
Confidence 688999999999888899999999999999999999999864322 1111111110 011110 0111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1054 HMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1054 ~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....+.+++.+||+.+|.+||++.++++
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 2335778999999999999999999887
No 367
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.98 E-value=5.1e-32 Score=309.43 Aligned_cols=270 Identities=22% Similarity=0.322 Sum_probs=200.9
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG----- 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 881 (1114)
.++|...+.||+|+||+||+|++. +|+.||+|++...... +.....+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 478999999999999999999975 7899999998754322 223456778999999999999999999987543
Q ss_pred -ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCce
Q 001253 882 -SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 882 -~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 960 (1114)
..++|+||+.. ++.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred ceEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 45899999975 7777653 4688999999999999999999998 99999999999999999999999999987
Q ss_pred ecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc----
Q 001253 961 VIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL---- 1035 (1114)
Q Consensus 961 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 1035 (1114)
.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.........
T Consensus 166 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~ 237 (342)
T cd07879 166 HADA----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTGVPGPE 237 (342)
T ss_pred CCCC----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCCHH
Confidence 6432 2234467889999999876 468899999999999999999999997543211 11111110000
Q ss_pred -c--------cccccccccCCCcc----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhccCCCc
Q 001253 1036 -V--------SGMLDARLNLQDEK----TVSHMITVLKIAMLCTNISPFDRPTMREVVL--MLSESNRRQGHF 1093 (1114)
Q Consensus 1036 -~--------~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~~~~~~ 1093 (1114)
. .............. .......+.+++.+||++||++||+++|++. .+++.+......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~ 310 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEET 310 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccC
Confidence 0 00000000000000 0112346789999999999999999999994 477765543333
No 368
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=1.2e-31 Score=298.61 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=196.6
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEEEEe
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E 888 (1114)
|++.+.||+|++|+||+|+.. +++.||||++........ .....+|+..+++++ |||++++++++.+++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh--HHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 567789999999999999986 578999999875543221 233456889999998 9999999999999999999999
Q ss_pred cCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 889 YMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|+ +|++.+++.... ..+++.++..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~-- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR-- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCC--
Confidence 99 779999887544 5789999999999999999999998 9999999999999999999999999999865422
Q ss_pred CccccccccccccCccccc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc--------CCcccc
Q 001253 968 KSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN--------NSLVSG 1038 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 1038 (1114)
.......++..|+|||++. ...++.++||||||+++|||++|+.||......+...... ..... ......
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 153 PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKIC-SVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHH-HhcCCCChhhhhhHhhhhc
Confidence 2223456888999999875 4557899999999999999999999986543211111110 00000 000000
Q ss_pred cccccccCCCcc-----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1039 MLDARLNLQDEK-----TVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1039 ~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+......... .......+.+++.+||+.||++|||++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000000 0111356889999999999999999999875
No 369
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.98 E-value=1.2e-31 Score=293.71 Aligned_cols=248 Identities=23% Similarity=0.311 Sum_probs=203.5
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|++.++||+|+||.||++..+ +++.+|+|++....... .....+.+|+..++.++|+||+++++++.+....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 4788899999999999999865 78899999987654332 334567789999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCC
Q 001253 889 YMARGSLGELLHGA---SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 965 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~ 965 (1114)
|+++++|.+++.+. ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+|++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 99999999998642 35689999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccccc
Q 001253 966 QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLN 1045 (1114)
Q Consensus 966 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1114)
......+++.|+|||.+.+..++.++|+||+|+++|||++|+.||..... ... ...+....+
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~-~~~~~~~~~---------- 218 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM----QDL-RYKVQRGKY---------- 218 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHH-HHHHhcCCC----------
Confidence 22334688999999999999999999999999999999999999965432 111 111111111
Q ss_pred CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+.....++.+++.+|++.+|++||++.|+++
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 --PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1112234456899999999999999999999875
No 370
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=9.4e-32 Score=306.46 Aligned_cols=267 Identities=21% Similarity=0.321 Sum_probs=199.4
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe----cCc
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH----QGS 882 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~ 882 (1114)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++....... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP-TLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc-cchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 378999999999999999999976 69999999987643322 234567789999999999999999998763 346
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI 962 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~ 962 (1114)
.++||||+. ++|.+++... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 799999996 5899998743 4589999999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCC---CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC--cc
Q 001253 963 DMPQS---KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS--LV 1036 (1114)
Q Consensus 963 ~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 1036 (1114)
..... .......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||......... ..+........ ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~-~~~~~~~g~~~~~~~ 236 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQL-KLILSVLGSPSEEVL 236 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHH-HHHHHHhCCChhHhh
Confidence 43222 11234578899999998765 45889999999999999999999999754322111 11111000000 00
Q ss_pred ccccc-------ccccCCCcc-----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1037 SGMLD-------ARLNLQDEK-----TVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~-------~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..... ......... .......+.+++.+||+.+|++||++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000 000000000 1123457899999999999999999999887
No 371
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=5.4e-31 Score=289.95 Aligned_cols=242 Identities=23% Similarity=0.279 Sum_probs=189.6
Q ss_pred HhcCCcCCcee--cccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCc
Q 001253 807 ATDNFDERFVI--GRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 807 ~~~~~~~~~~l--G~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 882 (1114)
..++|++.+.+ |+|+||.||+++.+ +++.+|+|++....... . |+.....+ +|||++++++++...+.
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~--e~~~~~~~~~h~~iv~~~~~~~~~~~ 83 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------I--EPMVHQLMKDNPNFIKLYYSVTTLKG 83 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------h--hHHHHHHhhcCCCEEEEEEEEecCCe
Confidence 34567776666 99999999999975 68899999986543211 1 22222212 79999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-CeEEeeccCcee
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF-EAHVGDFGLAKV 961 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG~a~~ 961 (1114)
.++||||+++++|.+++.... .+++.++..++.|+++|++|||+. +++||||||+||+++.++ .++|+|||.+..
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~ 159 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKI 159 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence 999999999999999997543 889999999999999999999998 999999999999999998 999999999886
Q ss_pred cCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCC-CHHHHHHHHHhcCCcccccc
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGG-DLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
.... ....++..|+|||++.+..++.++||||+|+++|||++|+.||....... +...+.... ..
T Consensus 160 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~-------- 225 (267)
T PHA03390 160 IGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK-------- 225 (267)
T ss_pred cCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc--------
Confidence 5422 23468899999999999899999999999999999999999997443222 111221111 00
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCC-HHHHH
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPT-MREVV 1080 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl 1080 (1114)
. ..........+.+++.+||+.+|.+||+ ++|++
T Consensus 226 --~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 226 --K----LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred --c----CCcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 0 1111133456889999999999999996 58876
No 372
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=9.4e-32 Score=306.70 Aligned_cols=273 Identities=22% Similarity=0.305 Sum_probs=202.4
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec-----C
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ-----G 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 881 (1114)
.++|++.+.||+|+||+||+|+.. +++.||||++....... .....+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR-IDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 357899999999999999999975 78999999987543322 2244567899999999999999999988654 3
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 4799999996 589988874 35789999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc--------
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN-------- 1032 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 1032 (1114)
..... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||....... ....+......
T Consensus 158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 158 TSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCChHHhhh
Confidence 54322 22334568889999998764 468899999999999999999999996532111 11111110000
Q ss_pred ---CCc---ccccc-cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhhcc
Q 001253 1033 ---NSL---VSGML-DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM--LSESNRR 1089 (1114)
Q Consensus 1033 ---~~~---~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~~~ 1089 (1114)
... ..... ...... ..........+.+++.+||+++|++|||++|+++. ++.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred cCchhhhHHHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 000 00000 000000 00011234568899999999999999999999876 6665433
No 373
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-32 Score=295.13 Aligned_cols=244 Identities=23% Similarity=0.333 Sum_probs=202.2
Q ss_pred CceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCC
Q 001253 814 RFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 814 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
.++||.|.||+||-|+++ +|+.||||++.+.+.... ....++.|+.+++.++||.||.+...|+..+..++|||.+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 368999999999999965 899999999987765443 347799999999999999999999999999999999999987
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC---CCeEEeeccCceecCCCCCCc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK---FEAHVGDFGLAKVIDMPQSKS 969 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfG~a~~~~~~~~~~ 969 (1114)
.=|+-++....+++++..-..+..||+.||.|||-+ +|+|+|+||+|||+.+. ..+||||||+|++++ ....
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg--EksF 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG--EKSF 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecc--hhhh
Confidence 555556666677899999999999999999999998 99999999999999754 369999999999976 3344
Q ss_pred cccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCc
Q 001253 970 MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDE 1049 (1114)
Q Consensus 970 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1114)
...++|||.|.|||++..+.|...-||||.|||+|--++|..||... ++..+.++ ...+.....
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd---EdIndQIQ-------------NAaFMyPp~ 786 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED---EDINDQIQ-------------NAAFMYPPN 786 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc---cchhHHhh-------------ccccccCCC
Confidence 56789999999999999999999999999999999999999999643 33333322 223333344
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 001253 1050 KTVSHMITVLKIAMLCTNISPFDRPTMREV 1079 (1114)
Q Consensus 1050 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1079 (1114)
.-.+......++|...++..=.+|-+..+-
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~ 816 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKS 816 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhh
Confidence 445566678888888888888888877543
No 374
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=3.4e-31 Score=299.54 Aligned_cols=261 Identities=20% Similarity=0.238 Sum_probs=190.4
Q ss_pred eecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 816 VIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
.+|.|+++.||++.. +++.||||++...... ....+.+..|+..++.++||||+++++++.+.+..+++|||+++|++
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCS-KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccc-hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 344444444444444 6899999999765322 23456789999999999999999999999999999999999999999
Q ss_pred HHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC------C
Q 001253 896 GELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS------K 968 (1114)
Q Consensus 896 ~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~------~ 968 (1114)
.+++... ...+++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+........ .
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence 9999753 34688999999999999999999998 999999999999999999999999998875432111 1
Q ss_pred ccccccccccccCcccccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHh----cCCccc---cc
Q 001253 969 SMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIR----NNSLVS---GM 1039 (1114)
Q Consensus 969 ~~~~~~g~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~----~~~~~~---~~ 1039 (1114)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||..........+....... ...... .+
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSM 243 (314)
T ss_pred ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCc
Confidence 1233457788999999875 35888999999999999999999999764432222111111000 000000 00
Q ss_pred -------ccc--cccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1040 -------LDA--RLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1040 -------~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.+. ...............+.+++.+||++||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 000001112233457889999999999999999999876
No 375
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.8e-31 Score=301.44 Aligned_cols=268 Identities=26% Similarity=0.353 Sum_probs=196.6
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG----- 881 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 881 (1114)
.++|++.++||+|+||.||+|+++ +++.||+|++........ ....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 378999999999999999999976 689999999875433221 2335678999999999999999999875433
Q ss_pred ---ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccC
Q 001253 882 ---SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGL 958 (1114)
Q Consensus 882 ---~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 958 (1114)
..++||||+++ ++...+......+++.++..++.|+++||+|||+. +++||||||+||++++++.++|+|||+
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCcc
Confidence 46999999976 78887776666899999999999999999999998 999999999999999999999999999
Q ss_pred ceecCCCCCC----------ccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 001253 959 AKVIDMPQSK----------SMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR 1027 (1114)
Q Consensus 959 a~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 1027 (1114)
++........ ......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||..............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9765322211 1123457888999998765 4578999999999999999999999865433211111111
Q ss_pred HHHhcC---Cc-----ccccccccccCCCcc-----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1028 NFIRNN---SL-----VSGMLDARLNLQDEK-----TVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1028 ~~~~~~---~~-----~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..... .+ .....+......... .......+.+++.+|++.||++|||+.|++.
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 -LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred -HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00000 00 000000000000000 0112246889999999999999999999874
No 376
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=2.5e-31 Score=301.47 Aligned_cols=263 Identities=24% Similarity=0.339 Sum_probs=199.0
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe-cCce
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH-QGSN 883 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 883 (1114)
..+++|++.++||+|+||.||+|..+ +++.||+|++...... ....+.+..|+.+++.++||||+++.+++.. ....
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 45688999999999999999999966 7899999998654332 2234567789999999999999999999875 5578
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++||||+. ++|.++++. ..+++.....++.|+++||+|||+. +++||||+|+||++++++.++|+|||.+....
T Consensus 86 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 86 YFVTELLG-TDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred EEEeehhc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccC
Confidence 99999995 589998863 4578888899999999999999998 99999999999999999999999999987543
Q ss_pred CCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc----------
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN---------- 1032 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~---------- 1032 (1114)
. ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||......... ..+.+....
T Consensus 160 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd07856 160 P----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQF-SIITDLLGTPPDDVINTIC 234 (328)
T ss_pred C----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCCHHHHHhcc
Confidence 2 2233467889999998765 56899999999999999999999999654321111 111111000
Q ss_pred -CCcccccccccccCCCccc-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1033 -NSLVSGMLDARLNLQDEKT-----VSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1033 -~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
....... .........+ ......+.++|.+|++.+|++||++.+++..
T Consensus 235 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 235 SENTLRFV--QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred chhhHHHH--hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 0000001111 1123578899999999999999999998765
No 377
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=2.5e-31 Score=295.75 Aligned_cols=264 Identities=24% Similarity=0.354 Sum_probs=200.6
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|+..+.||+|++|.||+|+.. +++.||+|++..... .....+.+..|+.++++++|+|++++++++.+.+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 556778999999999999976 589999999986542 223345677899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS 969 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 969 (1114)
+++ +|.+++......+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+........ .
T Consensus 80 ~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~ 154 (282)
T cd07829 80 CDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-T 154 (282)
T ss_pred cCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-c
Confidence 985 99999986546799999999999999999999998 999999999999999999999999999986543221 2
Q ss_pred cccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc-----cccc--cc
Q 001253 970 MSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL-----VSGM--LD 1041 (1114)
Q Consensus 970 ~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~ 1041 (1114)
.....++..|+|||.+.+. .++.++||||+||++||+++|+.||......+.... +.+....... ...+ .+
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFK-IFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH-HHHHhCCCcHHHHHhhccccccc
Confidence 2334567889999998766 789999999999999999999999865332111111 1111100000 0000 00
Q ss_pred ccccCCC-----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1042 ARLNLQD-----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1042 ~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....... .........+.+++.+||+.||++||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000 001112457899999999999999999999875
No 378
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-32 Score=275.47 Aligned_cols=255 Identities=23% Similarity=0.342 Sum_probs=198.5
Q ss_pred ceecccCCeEEEEEE-eCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEecCCC
Q 001253 815 FVIGRGACGTVYRAV-LRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYEYMAR 892 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 892 (1114)
+.||+|+|+.|--+. ..+|..||||++.+... .....+-+|++++.+. .|+||++++++|++++.+|+|||-|.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g---HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG---HSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCc---hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 479999999999998 67899999999976632 3356677899999988 599999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC---eEEeeccCceecCCCC---
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE---AHVGDFGLAKVIDMPQ--- 966 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfG~a~~~~~~~--- 966 (1114)
|.|...+++ ...+++.++.++.++|+.||.|||.+ ||.|||+||+|||-.+... ||||||.+..-.....
T Consensus 161 GplLshI~~-~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s 236 (463)
T KOG0607|consen 161 GPLLSHIQK-RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS 236 (463)
T ss_pred chHHHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCCC
Confidence 999999984 45789999999999999999999998 9999999999999876543 8999999876432111
Q ss_pred ---CCccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHhc
Q 001253 967 ---SKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLD------QGGDLVTWVRNFIRN 1032 (1114)
Q Consensus 967 ---~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~p~~~~~------~~~~~~~~~~~~~~~ 1032 (1114)
.....+.+|+..|||||++. ...|+.++|.||+|||+|-|++|.+||.+.= +.+..-...++
T Consensus 237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~---- 312 (463)
T KOG0607|consen 237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN---- 312 (463)
T ss_pred CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHH----
Confidence 12234567999999999864 3458899999999999999999999996432 11221111111
Q ss_pred CCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1033 NSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...+.+.++.+.++...-.....+..+++...+..|+.+|-++.+++.
T Consensus 313 -~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 313 -KLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred -HHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 122223334444334444445556778888999999999999998876
No 379
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=286.41 Aligned_cols=262 Identities=23% Similarity=0.291 Sum_probs=201.8
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-C-C----ceeeEEeEEEe
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-H-R----NIVKLYGFCYH 879 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~ 879 (1114)
.+.+|.++..+|+|.||.|-++.++ ++..||||+++..... .+.-+-|+++++++. + | -+|++.++|..
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY----reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY----REAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH----hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 3688999999999999999999976 5789999999765443 344556899999993 3 3 48999999999
Q ss_pred cCceEEEEecCCCCCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-----------
Q 001253 880 QGSNLLMYEYMARGSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD----------- 947 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~----------- 947 (1114)
.++.|+|+|.+ |-++.+++..+ ..+++...+..|+.|++++++|||+. +++|.|+||+||++.+
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCC
Confidence 99999999998 44999999853 44789999999999999999999999 9999999999999842
Q ss_pred ---------CCCeEEeeccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 001253 948 ---------KFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQ 1018 (1114)
Q Consensus 948 ---------~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~ 1018 (1114)
...++++|||.|+.- .....+.+.|..|+|||++.+.+++.++||||+|||++|+.+|...|+.-++
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~----~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFD----HEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred ccceeccCCCcceEEEecCCccee----ccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 235899999999863 2334678899999999999999999999999999999999999999976554
Q ss_pred CCCHHHHHHHHH-----------------hcCCcc--cccccc--c--------ccCCCcccHHHHHHHHHHHhhccCCC
Q 001253 1019 GGDLVTWVRNFI-----------------RNNSLV--SGMLDA--R--------LNLQDEKTVSHMITVLKIAMLCTNIS 1069 (1114)
Q Consensus 1019 ~~~~~~~~~~~~-----------------~~~~~~--~~~~~~--~--------~~~~~~~~~~~~~~l~~li~~cl~~d 1069 (1114)
.+.+ ...+..+ ..+.+. +.-.++ + +.........+..++++++++|+..|
T Consensus 315 ~EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 315 LEHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred HHHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 3333 1111111 111000 000000 0 00001112234457999999999999
Q ss_pred CCCCCCHHHHHH
Q 001253 1070 PFDRPTMREVVL 1081 (1114)
Q Consensus 1070 P~~RPs~~evl~ 1081 (1114)
|.+|+|++|++.
T Consensus 394 P~~RiTl~EAL~ 405 (415)
T KOG0671|consen 394 PARRITLREALS 405 (415)
T ss_pred ccccccHHHHhc
Confidence 999999999874
No 380
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.7e-31 Score=304.27 Aligned_cols=268 Identities=24% Similarity=0.318 Sum_probs=205.5
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----ce
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG-----SN 883 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 883 (1114)
+|++.+.||+|++|.||+|+.. +++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5788899999999999999976 589999999876542 1233567888999999999999999999988765 78
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|+||||+++ +|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+....
T Consensus 80 ~lv~e~~~~-~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 80 YIVTELMET-DLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEEecchhh-hHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 999999985 899998743 3899999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCC--CccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc-CCcccc-
Q 001253 964 MPQS--KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN-NSLVSG- 1038 (1114)
Q Consensus 964 ~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~- 1038 (1114)
.... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... ...+..... +.....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI----DQLNLIVEVLGTPSEED 230 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH----HHHHHHHHhcCCCChhH
Confidence 3321 123345688899999999887 7899999999999999999999999754421 111111110 000000
Q ss_pred -----------cccccccCCCc-----ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhhc
Q 001253 1039 -----------MLDARLNLQDE-----KTVSHMITVLKIAMLCTNISPFDRPTMREVVLM--LSESNR 1088 (1114)
Q Consensus 1039 -----------~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~~ 1088 (1114)
.... ...... ........+.+++.+||+++|.+||++.++++. ++++..
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 231 LKFITSEKARNYLKS-LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hhhccccchhhHHhh-cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0000 000000 011134568899999999999999999999873 665543
No 381
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.9e-31 Score=303.46 Aligned_cols=271 Identities=24% Similarity=0.306 Sum_probs=200.1
Q ss_pred HHHHHHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe
Q 001253 801 FKDLVVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH 879 (1114)
Q Consensus 801 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 879 (1114)
..++....++|++.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhh-HHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3455667799999999999999999999964 78999999987543222 224557789999999999999999998864
Q ss_pred c------CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEE
Q 001253 880 Q------GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHV 953 (1114)
Q Consensus 880 ~------~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 953 (1114)
. ...|++++++ +++|.++++. ..+++..+..++.|+++|++|||+. +++||||||+||++++++.+||
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEE
Confidence 3 3467888887 6799988863 3589999999999999999999998 9999999999999999999999
Q ss_pred eeccCceecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc
Q 001253 954 GDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN 1032 (1114)
Q Consensus 954 ~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1032 (1114)
+|||+++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.............+.....
T Consensus 162 ~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (345)
T cd07877 162 LDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237 (345)
T ss_pred ecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99999886432 2234568889999998866 568889999999999999999999996543322111111100000
Q ss_pred C-Cccccccc-------ccccCCCcc-----cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1033 N-SLVSGMLD-------ARLNLQDEK-----TVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1033 ~-~~~~~~~~-------~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
. .....+.+ ..+...... .......+.+++.+|++.||.+||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 00000000 000000000 00123467899999999999999999998754
No 382
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=5.6e-31 Score=300.45 Aligned_cols=267 Identities=22% Similarity=0.287 Sum_probs=197.0
Q ss_pred cCCc-CCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChh-----------hHHHHHHHHHHHhcCCCCceeeEEe
Q 001253 809 DNFD-ERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNN-----------VDNSFRAEILTLGKIRHRNIVKLYG 875 (1114)
Q Consensus 809 ~~~~-~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 875 (1114)
++|. +.+.||+|+||+||+|+++ +++.||||++......... ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4555 4567999999999999976 6899999998754332210 1124678999999999999999999
Q ss_pred EEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEee
Q 001253 876 FCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGD 955 (1114)
Q Consensus 876 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 955 (1114)
++..++..++||||++ |+|.+++.. ...+++.....++.|++.||+|||+. +++||||+|+||+++.++.++++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECC
Confidence 9999999999999997 599999863 44689999999999999999999998 999999999999999999999999
Q ss_pred ccCceecCCCC-------------CCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCC
Q 001253 956 FGLAKVIDMPQ-------------SKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGD 1021 (1114)
Q Consensus 956 fG~a~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~ 1021 (1114)
||.+.....+. ........++..|+|||.+.+. .++.++||||+||++|||++|+.||......+.
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 242 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ 242 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99997654111 1112233567889999998764 468899999999999999999999975543221
Q ss_pred HHHHHHHHHhcCC---cccccccccc---cCC-C----cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1022 LVTWVRNFIRNNS---LVSGMLDARL---NLQ-D----EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1022 ~~~~~~~~~~~~~---~~~~~~~~~~---~~~-~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
. ..+........ +......+.. ... . .........+.+++.+|++.+|++||+++|++.
T Consensus 243 ~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 243 L-GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred H-HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1 11211111110 0000000000 000 0 001112346889999999999999999999985
No 383
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=5.2e-31 Score=323.76 Aligned_cols=148 Identities=30% Similarity=0.381 Sum_probs=134.6
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
++|++.++||+|+||+||+|++. +++.||||+++............+..|+.+++.++||||+++++++......|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57899999999999999999987 78999999998665544455577889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCce
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 960 (1114)
||+.+++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999974 34688999999999999999999998 99999999999999999999999999886
No 384
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=4.9e-31 Score=289.57 Aligned_cols=250 Identities=23% Similarity=0.307 Sum_probs=196.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCC--ChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREG--NNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
+|.+.++||+|+||+||++++. .+..+++|+++..... .......+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4788899999999999999976 3455667766543221 112234566789999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 887 YEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|||+++++|.+++.. ....+++.++..++.|+++|++|||+. +++|+||+|+||++++ +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998863 345789999999999999999999998 9999999999999975 579999999998654
Q ss_pred CCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
.. ........|++.|+|||...+..++.++||||+|+++|+|++|..||.... ........... .
T Consensus 157 ~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~----~~~~~~~~~~~-~--------- 221 (260)
T cd08222 157 GS-CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN----FLSVVLRIVEG-P--------- 221 (260)
T ss_pred CC-cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHHcC-C---------
Confidence 22 222334568889999999988889999999999999999999999986322 22222221111 0
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....+......+.+++.+||+.+|++||++.|+++
T Consensus 222 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 ---TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 01112233457889999999999999999999875
No 385
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.7e-30 Score=283.48 Aligned_cols=239 Identities=26% Similarity=0.297 Sum_probs=196.7
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
||+|+||.||++..+ +++.||+|++.............+..|+.++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999976 5899999999876554444566788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccc
Q 001253 896 GELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAG 975 (1114)
Q Consensus 896 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g 975 (1114)
.+++... ..+++.....++.|+++|+.|+|+. +++|+||+|+||+++.++.++|+|||.+....... .......+
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~ 155 (250)
T cd05123 81 FSHLSKE-GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCG 155 (250)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcC
Confidence 9999744 3689999999999999999999998 99999999999999999999999999998754221 22344568
Q ss_pred cccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHH
Q 001253 976 SYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHM 1055 (1114)
Q Consensus 976 ~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1114)
+..|+|||...+..++.++|+||||+++|++++|+.||...+. ....+..... . . ..+....
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~-~---------~----~~~~~~~ 217 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR----KEIYEKILKD-P---------L----RFPEFLS 217 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHhcC-C---------C----CCCCCCC
Confidence 8899999999888899999999999999999999999964432 2222221111 0 0 1111113
Q ss_pred HHHHHHHhhccCCCCCCCCCHHH
Q 001253 1056 ITVLKIAMLCTNISPFDRPTMRE 1078 (1114)
Q Consensus 1056 ~~l~~li~~cl~~dP~~RPs~~e 1078 (1114)
..+.+++.+||..||++||++++
T Consensus 218 ~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 218 PEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHHHhcCCHhhCCCccc
Confidence 46789999999999999999955
No 386
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.5e-32 Score=274.48 Aligned_cols=276 Identities=21% Similarity=0.281 Sum_probs=214.6
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCce
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 883 (1114)
..-.+|+..++||+|+|++|..++++ +.+.||+|++++....+.+..+-.+.|-.+.... +||.+|.++.+|..+...
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl 326 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL 326 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence 44578999999999999999999976 7889999999988666555566677788777766 699999999999999999
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++|.||++||+|--.+++ ...++++.+......|.-||.|||+. ||++||+|.+|||+|..|++|++|+|+++.-
T Consensus 327 ffvieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~- 401 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG- 401 (593)
T ss_pred EEEEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC-
Confidence 999999999999888874 44678888888888999999999999 9999999999999999999999999999863
Q ss_pred CCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCC---CCCCHHHHHHHHHhcCCcccccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLD---QGGDLVTWVRNFIRNNSLVSGML 1040 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1114)
........+++|||.|.|||++.+..|...+|.|++||+++||+.|+.||+... +...-.+++-+.+-+
T Consensus 402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile-------- 473 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE-------- 473 (593)
T ss_pred CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh--------
Confidence 234556678999999999999999999999999999999999999999997433 112223333322221
Q ss_pred cccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCCCCc
Q 001253 1041 DARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDHDSD 1103 (1114)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~ 1103 (1114)
..++ .+.........+++.-++.||.+|..-.--. ....-.++.++..+|||.-
T Consensus 474 -kqir----iprslsvkas~vlkgflnkdp~erlgc~~~~----g~~dik~h~ffr~idwd~l 527 (593)
T KOG0695|consen 474 -KQIR----IPRSLSVKASHVLKGFLNKDPKERLGCRPQT----GFSDIKSHAFFRSIDWDLL 527 (593)
T ss_pred -hccc----ccceeehhhHHHHHHhhcCCcHHhcCCCccc----chhhhhcchhhhhCCHHHH
Confidence 1111 1122223455677788999999985321100 2223345566667777753
No 387
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-31 Score=300.80 Aligned_cols=253 Identities=23% Similarity=0.358 Sum_probs=207.1
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEe----
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYH---- 879 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~---- 879 (1114)
..++-|++..+||.|.+|.||+++.+ +|+.+|||+....... ..+++.|.++++.. .|||++.++|+|..
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~----deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE----EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc----cHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 34567888999999999999999954 7899999998766654 34567788888877 69999999999864
Q ss_pred -cCceEEEEecCCCCCHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeecc
Q 001253 880 -QGSNLLMYEYMARGSLGELLHG-ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFG 957 (1114)
Q Consensus 880 -~~~~~lv~E~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 957 (1114)
++..++|||||.+|+.-|+++. .+..+.|..+..|++.++.|+.+||.. .++|||||-.|||+++++.||++|||
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFG 168 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFG 168 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeee
Confidence 5678999999999999999974 255899999999999999999999998 99999999999999999999999999
Q ss_pred CceecCCCCCCccccccccccccCcccccc-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc
Q 001253 958 LAKVIDMPQSKSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN 1032 (1114)
Q Consensus 958 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1032 (1114)
.+...+ .......+..|||.|||||++.. ..|+.++|+||+|++..||.-|.+|+.++..-..+...
T Consensus 169 vSaQld-sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I------- 240 (953)
T KOG0587|consen 169 VSAQLD-STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI------- 240 (953)
T ss_pred eeeeee-cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC-------
Confidence 998875 34455677899999999999864 34778999999999999999999999866542211100
Q ss_pred CCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1033 NSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
...++.. -..+.....++-++|..|+..|.++||++.++++
T Consensus 241 ------pRNPPPk--Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 241 ------PRNPPPK--LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------CCCCCcc--ccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 0111111 2234556678999999999999999999987653
No 388
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=2.8e-31 Score=303.42 Aligned_cols=259 Identities=24% Similarity=0.333 Sum_probs=197.3
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc----
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS---- 882 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 882 (1114)
.++|++.+.||+|++|+||+|+.. +++.||+|++....... ...+.+.+|+.+++.++|||++++.+++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA-IHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh-hHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 578999999999999999999986 68899999987543222 234556789999999999999999998876554
Q ss_pred --eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCce
Q 001253 883 --NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 883 --~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~ 960 (1114)
.++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +++||||||+||++++++.++|+|||++.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccccc
Confidence 89999999 5699999873 4689999999999999999999998 99999999999999999999999999998
Q ss_pred ecCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc-CCcccc
Q 001253 961 VIDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN-NSLVSG 1038 (1114)
Q Consensus 961 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 1038 (1114)
..... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||...... ..++..... +...+.
T Consensus 167 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~----~~~~~i~~~~~~~~~~ 238 (343)
T cd07851 167 HTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI----DQLKRIMNLVGTPDEE 238 (343)
T ss_pred ccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHhcCCCCHH
Confidence 65322 234467889999998865 46788999999999999999999999754321 111111110 000000
Q ss_pred cc------------cc-cccCCCc---ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1039 ML------------DA-RLNLQDE---KTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1039 ~~------------~~-~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+. .. ....+.. ........+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00 00 0000000 00112457889999999999999999999875
No 389
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=9.4e-31 Score=298.97 Aligned_cols=264 Identities=23% Similarity=0.334 Sum_probs=193.4
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec-------
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ------- 880 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 880 (1114)
.+|++.+.||+|+||+||+|..+ +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 67999999999999999999975 689999999865543 2246678899999999999999999876543
Q ss_pred -------CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC-CCCCeE
Q 001253 881 -------GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLD-DKFEAH 952 (1114)
Q Consensus 881 -------~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~k 952 (1114)
...|+||||+++ +|.+++.. ..+++..+..++.|+++||+|||+. +++||||||+||+++ +++.+|
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 82 VGSLTELNSVYIVQEYMET-DLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccccccceEEEEeecccc-cHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence 346899999975 99988863 4688999999999999999999998 999999999999997 456789
Q ss_pred EeeccCceecCCCCCC--ccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 001253 953 VGDFGLAKVIDMPQSK--SMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNF 1029 (1114)
Q Consensus 953 l~DfG~a~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 1029 (1114)
++|||.+......... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||................
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 235 (342)
T cd07854 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV 235 (342)
T ss_pred ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 9999999865422211 1123357889999998654 567889999999999999999999997543221111111100
Q ss_pred Hhc---------CCcccccccccccCCC---cccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1030 IRN---------NSLVSGMLDARLNLQD---EKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1030 ~~~---------~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
... ................ .........+.+++.+|+++||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 0000000000000000 001112346789999999999999999999984
No 390
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=2e-30 Score=295.25 Aligned_cols=272 Identities=22% Similarity=0.267 Sum_probs=195.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-C--CcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEec----C
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-T--GHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQ----G 881 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~ 881 (1114)
+|++.+.||+|+||.||+|+.. + +..||+|++...... ....+.+.+|+.+++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4778889999999999999976 4 789999998654322 22345677899999999 599999999875432 3
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..++++||++ ++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.++.
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred cEEEEEeccc-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 5688999986 589998863 45789999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCC---CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH----------
Q 001253 962 IDMPQS---KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR---------- 1027 (1114)
Q Consensus 962 ~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~---------- 1027 (1114)
...... .......|+..|+|||+..+ ..++.++||||+||++|++++|+.||...+........+.
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 542211 12234578999999998765 4688999999999999999999999875432111111000
Q ss_pred -HHHhcC--CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 001253 1028 -NFIRNN--SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL--MLSESN 1087 (1114)
Q Consensus 1028 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1087 (1114)
...... ........................+.+++.+|++.||++|||+.|++. .+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 000000 000000000000000000112346889999999999999999999864 344443
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-32 Score=291.84 Aligned_cols=245 Identities=23% Similarity=0.295 Sum_probs=205.6
Q ss_pred cCCcCCceecccCCeEEEEEEeCCCc-EEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRTGH-TVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~g~-~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.+++.+..||-|+||.|=++..+..+ .+|+|++++...-+....+.+..|-.+|...+.|.||++|..|.++...|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45566678999999999999876433 48999998877666566677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS 967 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 967 (1114)
|-|-||.+...++++ +.++..+...++..+++|++|||++ +||+||+||+|.+++.+|-+||.|||+|+.+. ..
T Consensus 500 EaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~--~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG--SG 573 (732)
T ss_pred HhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc--cC
Confidence 999999999999854 4778888888888999999999999 99999999999999999999999999999875 55
Q ss_pred CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCC
Q 001253 968 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQ 1047 (1114)
Q Consensus 968 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1114)
...-+++|||.|.|||++..+..+.++|.||+|+++||+++|.+||.+.++-..+...++. +..
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG-id~--------------- 637 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG-IDK--------------- 637 (732)
T ss_pred CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh-hhh---------------
Confidence 6667899999999999999999999999999999999999999999876653333333332 111
Q ss_pred CcccHHHHHHHHHHHhhccCCCCCCCCC
Q 001253 1048 DEKTVSHMITVLKIAMLCTNISPFDRPT 1075 (1114)
Q Consensus 1048 ~~~~~~~~~~l~~li~~cl~~dP~~RPs 1075 (1114)
...+........++|++....+|.+|..
T Consensus 638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 1223334456778888888999999976
No 392
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-31 Score=294.23 Aligned_cols=239 Identities=24% Similarity=0.276 Sum_probs=193.0
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 885 (1114)
+++|.....+|.|+|++|-.+... +++..+||++.+.... -.+|+.+.... +||||+++.+.+.++.+.|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~-------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD-------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccc-------cccccchhhhhcCCCcceeecceecCCceeee
Confidence 356777778999999999999965 7889999999776332 23456454444 79999999999999999999
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE-CCCCCeEEeeccCceecCC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILL-DDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill-~~~~~~kl~DfG~a~~~~~ 964 (1114)
|||.+.|+-+.+.+..... .. ..+..|+.+++.|+.|||++ ||||||+||+|||+ ++.++++|+|||.++....
T Consensus 394 v~e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eehhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 9999999988887763332 22 67778999999999999998 99999999999999 6999999999999997653
Q ss_pred CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
. ..+-+-|..|.|||+.....|+.++|+||+|+++|+|++|+.||...+.. ..+...+..+.
T Consensus 469 ~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~i~~~~---------- 530 (612)
T KOG0603|consen 469 S----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTRIQMPK---------- 530 (612)
T ss_pred h----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHhhcCCc----------
Confidence 3 33446788999999999999999999999999999999999999865543 12222222221
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+....+....+++.+||+.||.+||+|.++..
T Consensus 531 -----~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 531 -----FSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -----cccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 12344557889999999999999999999754
No 393
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.3e-32 Score=268.59 Aligned_cols=265 Identities=21% Similarity=0.345 Sum_probs=197.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe--------
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH-------- 879 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 879 (1114)
..|....+||+|.||.||+|+.+ +|+.||+|++.-..+.... -....+|++++..++|+|++.+++.|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGf-pitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCC-cHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 45666778999999999999966 6888999876543222212 2234579999999999999999998853
Q ss_pred cCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 880 QGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
...+|+||++|+. +|.-++......++..++.+++.++..||.|+|+. .|+|||+||.|+||+.+|.+||+|||++
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccc
Confidence 2347999999988 99999987777899999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---CccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCc
Q 001253 960 KVIDMPQS---KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSL 1035 (1114)
Q Consensus 960 ~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1114)
+.+..+.. ...+..+-|..|++||.+.+ ..|+++.|||+.||++.||++|.+-+..... ......+...... .
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte-qqql~~Is~LcGs--~ 248 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE-QQQLHLISQLCGS--I 248 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH-HHHHHHHHHHhcc--C
Confidence 86643322 22345567999999999876 4599999999999999999999887764332 2222333322211 1
Q ss_pred cccccc--------cc-----ccCCC-cccHHH------HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1036 VSGMLD--------AR-----LNLQD-EKTVSH------MITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1036 ~~~~~~--------~~-----~~~~~-~~~~~~------~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
....+. .. +.... ..-... ..+..+++..++..||.+|+++++++.
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 111110 00 00000 000111 126788999999999999999998764
No 394
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=280.13 Aligned_cols=261 Identities=26% Similarity=0.346 Sum_probs=201.5
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhH----HHHHHHHHHHhcCCCCceeeEEeEEEe-
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVD----NSFRAEILTLGKIRHRNIVKLYGFCYH- 879 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~- 879 (1114)
...++|-....||+|+|+.||+|.+- ..+.||||+-.....+.++.. +...+|..+.+.++||.||++++++.-
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34467888889999999999999954 578899998766655544333 334579999999999999999999974
Q ss_pred cCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC---CCCCeEEeec
Q 001253 880 QGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLD---DKFEAHVGDF 956 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~Df 956 (1114)
.+.+|-|.|||+|.+|+-+++. ...+++.++..|+.||+.||.||.+. +++|+|-|+||.|||+. .-|.+||+||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQ-hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQ-HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred cccceeeeeecCCCchhHHHHh-hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 5678999999999999999984 45789999999999999999999986 78999999999999984 4578999999
Q ss_pred cCceecCCCCCC------ccccccccccccCcccccc----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 001253 957 GLAKVIDMPQSK------SMSAIAGSYGYIAPEYAYT----MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWV 1026 (1114)
Q Consensus 957 G~a~~~~~~~~~------~~~~~~g~~~y~aPE~~~~----~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~ 1026 (1114)
|++++++..... .....+||+.|.+||.+.- .+++.|+||||+|||+|+.+.|+.||.......+.
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI---- 693 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI---- 693 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH----
Confidence 999988654332 2345689999999998753 34678999999999999999999999754432222
Q ss_pred HHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 001253 1027 RNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVV 1080 (1114)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1080 (1114)
+..+.+..+ .... .+..+....+...||++|+...-++|....++.
T Consensus 694 ---LqeNTIlkA---tEVq--FP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 694 ---LQENTILKA---TEVQ--FPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred ---Hhhhchhcc---eecc--CCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 122222111 1111 111222334677899999999999998887764
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=7.1e-31 Score=251.29 Aligned_cols=217 Identities=23% Similarity=0.364 Sum_probs=175.4
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCc
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 882 (1114)
++..++...+..||+|+||.|-+.++. +|...|+|.++...... ..++...|+.+..+. .+|.+|.++|.+.+.+.
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q--~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQ--EQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChH--HHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 344556666678999999999999865 89999999998766532 245566777765544 79999999999999999
Q ss_pred eEEEEecCCCCCHHHHhc---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 883 NLLMYEYMARGSLGELLH---GASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
.++.||.|+- +|+.+-+ +.+..+++...-+||..+.+||.|||++. .++|||+||+|||++.+|+||+||||.+
T Consensus 120 vwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccc
Confidence 9999999976 8877654 35678999999999999999999999975 8999999999999999999999999999
Q ss_pred eecCCCCCCccccccccccccCccccc----cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHh
Q 001253 960 KVIDMPQSKSMSAIAGSYGYIAPEYAY----TMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIR 1031 (1114)
Q Consensus 960 ~~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1031 (1114)
..+.+.... +-..|-..|||||.+. ...|+.|+||||+|+++.||.+++.||+.... -.+.+++.+.
T Consensus 197 G~L~dSiAk--t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t---pF~qLkqvVe 267 (282)
T KOG0984|consen 197 GYLVDSIAK--TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT---PFQQLKQVVE 267 (282)
T ss_pred eeehhhhHH--HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC---HHHHHHHHhc
Confidence 876433222 2245778899999875 34789999999999999999999999975443 3344444443
No 396
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=6.5e-30 Score=276.07 Aligned_cols=220 Identities=25% Similarity=0.247 Sum_probs=175.7
Q ss_pred cCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCHHHH
Q 001253 820 GACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSLGEL 898 (1114)
Q Consensus 820 G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~ 898 (1114)
|.+|+||+++++ +++.||+|++..... +..|...+....||||+++++++.+.+..++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999976 789999999975432 22344445556799999999999999999999999999999999
Q ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccccccccc
Q 001253 899 LHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAGSYG 978 (1114)
Q Consensus 899 l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~ 978 (1114)
+... ..+++..+..++.|+++||+|+|+. +++||||||+||+++.++.++++|||.+...... .....++..
T Consensus 76 l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~ 147 (237)
T cd05576 76 ISKF-LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENM 147 (237)
T ss_pred HHHh-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCcc
Confidence 8743 4689999999999999999999998 9999999999999999999999999988654321 223356778
Q ss_pred ccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHH
Q 001253 979 YIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITV 1058 (1114)
Q Consensus 979 y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1058 (1114)
|+|||...+..++.++||||+|+++|||++|+.|+....... .. ..... .+......+
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~--------~~~~~----~~~~~~~~~ 205 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------NT--------HTTLN----IPEWVSEEA 205 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------cc--------ccccC----CcccCCHHH
Confidence 999999988889999999999999999999998875322100 00 00000 111123467
Q ss_pred HHHHhhccCCCCCCCCCHH
Q 001253 1059 LKIAMLCTNISPFDRPTMR 1077 (1114)
Q Consensus 1059 ~~li~~cl~~dP~~RPs~~ 1077 (1114)
.+++.+|++.||++||++.
T Consensus 206 ~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 206 RSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHccCCHHHhcCCC
Confidence 8899999999999999974
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=8.4e-31 Score=254.23 Aligned_cols=260 Identities=19% Similarity=0.277 Sum_probs=199.0
Q ss_pred HhcCCcCCceecccCCeEEEEEEe-CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecC--c
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVL-RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQG--S 882 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 882 (1114)
..++|++.+++|+|.|+.||.|.. .+.++++||++++.+ .+.+.+|+.+++.++ ||||++++++..+.. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 347899999999999999999994 568899999998655 466899999999997 999999999998754 5
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-CCeEEeeccCcee
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK-FEAHVGDFGLAKV 961 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfG~a~~ 961 (1114)
..+|+||+.+.+...+.. .++...+.....+++.||.|+|++ ||+|||+||.|||+|.. ..++|+|+|+|.+
T Consensus 110 paLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred chhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhh
Confidence 679999999987776654 677788889999999999999999 99999999999999965 5699999999998
Q ss_pred cCCCCCCccccccccccccCcccccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC------
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS------ 1034 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------ 1034 (1114)
+.. .......+.+..|--||.+.. ..|++.-|+|||||++..|+..+.||....++.+....+...+...+
T Consensus 183 YHp--~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 183 YHP--GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred cCC--CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 753 233344567788899998865 45899999999999999999999999876655544333332222110
Q ss_pred --------cccccccc----cccCC-CcccH-HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1035 --------LVSGMLDA----RLNLQ-DEKTV-SHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1035 --------~~~~~~~~----~~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
..+.++.. ++... ..... -...++.+++.+.+..|-.+|||++|.+.
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 01111000 00000 00000 11257889999999999999999999753
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=272.20 Aligned_cols=280 Identities=22% Similarity=0.284 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCCHHHHHHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhc
Q 001253 786 STVSDIYFPPKEGFTFKDLVVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGK 864 (1114)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~ 864 (1114)
++...-|-|...+-.|. ..+|.+.++||.|.|+|||+|.+. +.+.||+|+.+..... .+....|++++++
T Consensus 60 dY~kGGYHpV~IGD~F~-----~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY----tEaAlDEIklL~~ 130 (590)
T KOG1290|consen 60 DYRKGGYHPVRIGDVFN-----GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY----TEAALDEIKLLQQ 130 (590)
T ss_pred hhhcCCCceeecccccc-----CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH----HHHHHHHHHHHHH
Confidence 33334444555555543 378999999999999999999965 6789999999865543 3455679999988
Q ss_pred CC-----C---CceeeEEeEEEec----CceEEEEecCCCCCHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 001253 865 IR-----H---RNIVKLYGFCYHQ----GSNLLMYEYMARGSLGELLHG-ASSTLDWQTRFMIALGAAEGLSYLHHDCKP 931 (1114)
Q Consensus 865 l~-----h---~niv~l~~~~~~~----~~~~lv~E~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 931 (1114)
++ | .+||+++++|... .+.|||+|++.. +|..++.. ..+.++...+..|++||+.||.|||+.|
T Consensus 131 v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec-- 207 (590)
T KOG1290|consen 131 VREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC-- 207 (590)
T ss_pred HHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--
Confidence 84 3 3799999999764 478999999955 77777753 4568999999999999999999999998
Q ss_pred CeEecCCCCCCeEECCC---------------------------------------------------------------
Q 001253 932 RIFHRDIKSNNILLDDK--------------------------------------------------------------- 948 (1114)
Q Consensus 932 ~ivH~Dlk~~Nill~~~--------------------------------------------------------------- 948 (1114)
||||.||||+|||+..+
T Consensus 208 gIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~ 287 (590)
T KOG1290|consen 208 GIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEAS 287 (590)
T ss_pred CccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhh
Confidence 99999999999999400
Q ss_pred --------------------------------------------------------------------------------
Q 001253 949 -------------------------------------------------------------------------------- 948 (1114)
Q Consensus 949 -------------------------------------------------------------------------------- 948 (1114)
T Consensus 288 l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s 367 (590)
T KOG1290|consen 288 LAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSS 367 (590)
T ss_pred hcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccC
Confidence
Q ss_pred -----------------------CCeEEeeccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHH
Q 001253 949 -----------------------FEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLE 1005 (1114)
Q Consensus 949 -----------------------~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~e 1005 (1114)
.+|||+|||-|+.+. ...+.-..|..|+|||++.+.+|+..+||||++|++||
T Consensus 368 ~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FE 443 (590)
T KOG1290|consen 368 PSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVH----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFE 443 (590)
T ss_pred cCCccccccccccCCCCCCCccceeEEEeeccchhhhh----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHH
Confidence 014566666665432 22233357889999999999999999999999999999
Q ss_pred HHhCCCCCCCCCC------CCCHHHHHH-------HHHhcCCccccccccc-----------------ccCCCcccHHHH
Q 001253 1006 LLTGRAPVQPLDQ------GGDLVTWVR-------NFIRNNSLVSGMLDAR-----------------LNLQDEKTVSHM 1055 (1114)
Q Consensus 1006 l~tg~~p~~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 1055 (1114)
++||...|.+-.. .+++...+. .+...+.+...+++.+ +......+.+..
T Consensus 444 LaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A 523 (590)
T KOG1290|consen 444 LATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDA 523 (590)
T ss_pred hhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHH
Confidence 9999998875432 112222221 2222333333332221 111123466777
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1056 ITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1056 ~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.++.+|+.-||+.+|++||||.+.++
T Consensus 524 ~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 524 QQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred HHHHHHHHHHHhcCccccccHHHHhc
Confidence 89999999999999999999999874
No 399
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=3.4e-29 Score=299.55 Aligned_cols=260 Identities=18% Similarity=0.209 Sum_probs=169.1
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC-C----CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeE-----
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR-T----GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGF----- 876 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~----- 876 (1114)
..++|+..++||+|+||+||+|++. + +..||||++...... +....| .++...+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 4578999999999999999999976 4 689999987643221 111111 1111122222222111
Q ss_pred -EEecCceEEEEecCCCCCHHHHhccCCCC-------------------CCHHHHHHHHHHHHHHHHHHHhCCCCCeEec
Q 001253 877 -CYHQGSNLLMYEYMARGSLGELLHGASST-------------------LDWQTRFMIALGAAEGLSYLHHDCKPRIFHR 936 (1114)
Q Consensus 877 -~~~~~~~~lv~E~~~~gsL~~~l~~~~~~-------------------l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 936 (1114)
...+...++||||+++++|.++++..... .....+..++.|++.||+|||+. +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 24556789999999999999998743211 12334567999999999999998 99999
Q ss_pred CCCCCCeEECC-CCCeEEeeccCceecCCCCCCccccccccccccCccccccC----------------------CCCcc
Q 001253 937 DIKSNNILLDD-KFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTM----------------------KVTEK 993 (1114)
Q Consensus 937 Dlk~~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----------------------~~~~~ 993 (1114)
||||+|||+++ ++.+||+|||+|+..............+++.|||||.+... .++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999999986 57999999999986543334444567899999999965321 23456
Q ss_pred cchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccc---ccccccCC----CcccHHHHHHHHHHHhhcc
Q 001253 994 CDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM---LDARLNLQ----DEKTVSHMITVLKIAMLCT 1066 (1114)
Q Consensus 994 ~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~l~~li~~cl 1066 (1114)
+||||+||++|||+++..|+. .....+.+.....+.....+ ..+..... .+..........+++.+|+
T Consensus 360 ~DVwSlGviL~el~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSD-----SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCc-----hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 799999999999999766543 11222211111110000000 00000000 0000001123458999999
Q ss_pred CCCCCCCCCHHHHHH
Q 001253 1067 NISPFDRPTMREVVL 1081 (1114)
Q Consensus 1067 ~~dP~~RPs~~evl~ 1081 (1114)
+.||++|||++|+++
T Consensus 435 ~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 435 RFKGRQRISAKAALA 449 (566)
T ss_pred cCCcccCCCHHHHhC
Confidence 999999999999886
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.8e-28 Score=265.99 Aligned_cols=239 Identities=30% Similarity=0.390 Sum_probs=193.9
Q ss_pred CCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCHHHHh
Q 001253 821 ACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSLGELL 899 (1114)
Q Consensus 821 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l 899 (1114)
+||.||+|.++ +|+.+|+|++........ .+.+.+|++.+++++|+|++++++++......+++|||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999987 589999999976554322 567899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccccccc
Q 001253 900 HGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGY 979 (1114)
Q Consensus 900 ~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y 979 (1114)
.... .+++..+..++.+++++++|||+. +++|+||+|+||++++++.++++|||.+....... ......++..|
T Consensus 79 ~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~ 152 (244)
T smart00220 79 KKRG-RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEY 152 (244)
T ss_pred Hhcc-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCC
Confidence 7443 389999999999999999999998 99999999999999999999999999998765322 33445688899
Q ss_pred cCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHH
Q 001253 980 IAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVL 1059 (1114)
Q Consensus 980 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1059 (1114)
+|||...+..++.++||||+|+++|++++|..||..........+. ........ ..........+.
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~ 218 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKK----IGKPKPPF----------PPPEWKISPEAK 218 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH----HhccCCCC----------ccccccCCHHHH
Confidence 9999998888999999999999999999999999753322222221 11111100 000000234688
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 001253 1060 KIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1060 ~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+++.+|+..+|++||++.++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh
Confidence 9999999999999999999986
No 401
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.9e-29 Score=275.16 Aligned_cols=209 Identities=26% Similarity=0.326 Sum_probs=176.1
Q ss_pred cCCcCCceecccCCeEEEEEEe-CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVL-RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
.-|..++.||-|+||.|.+++- ++...||.|.+.+...-.......++.|-.+++.-+.+-||+++-.|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 4588888999999999999984 456789999987665444444556788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceec-----
Q 001253 888 EYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVI----- 962 (1114)
Q Consensus 888 E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~----- 962 (1114)
||++||++-.+|-+ .+.+.+..+..++..+..|+++.|.. |+|||||||+|||||.||++||+|||++.-+
T Consensus 709 dYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred eccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceeccc
Confidence 99999999999873 44677777777788999999999999 9999999999999999999999999998522
Q ss_pred ----CCCCC--------------------------------CccccccccccccCccccccCCCCcccchHHHHHHHHHH
Q 001253 963 ----DMPQS--------------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLEL 1006 (1114)
Q Consensus 963 ----~~~~~--------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el 1006 (1114)
..... ......+||+.|+|||++....|+..+|.||.|||+|||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 10000 001134799999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCC
Q 001253 1007 LTGRAPVQPLDQGGD 1021 (1114)
Q Consensus 1007 ~tg~~p~~~~~~~~~ 1021 (1114)
+.|+.||.+....+.
T Consensus 865 ~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 865 LVGQPPFLADTPGET 879 (1034)
T ss_pred hhCCCCccCCCCCcc
Confidence 999999987665554
No 402
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.4e-28 Score=283.87 Aligned_cols=264 Identities=20% Similarity=0.228 Sum_probs=179.0
Q ss_pred HhcCCcCCceecccCCeEEEEEEe-----------------CCCcEEEEEEecccCCCCh-----------hhHHHHHHH
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVL-----------------RTGHTVAVKKLASNREGNN-----------NVDNSFRAE 858 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~-----------~~~~~~~~E 858 (1114)
..++|++.++||+|+||+||+|.+ ..++.||||++........ ...+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 2356899999865332110 011223346
Q ss_pred HHHHhcCCCCc-----eeeEEeEEEe--------cCceEEEEecCCCCCHHHHhccCC----------------------
Q 001253 859 ILTLGKIRHRN-----IVKLYGFCYH--------QGSNLLMYEYMARGSLGELLHGAS---------------------- 903 (1114)
Q Consensus 859 ~~~l~~l~h~n-----iv~l~~~~~~--------~~~~~lv~E~~~~gsL~~~l~~~~---------------------- 903 (1114)
+.++.+++|.+ +++++++|.. ++..++||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 77777776654 4677777753 356799999999999999987421
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccccccccCc
Q 001253 904 -STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAP 982 (1114)
Q Consensus 904 -~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aP 982 (1114)
..+++..+..++.|+++||+|+|+. +|+||||||+||+++.++.+||+|||+++..............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1346778889999999999999998 999999999999999999999999999976543222222223457899999
Q ss_pred cccccCC--------------------C--CcccchHHHHHHHHHHHhCCC-CCCCCCCCCCHHHHH---HHHHhcCCcc
Q 001253 983 EYAYTMK--------------------V--TEKCDIYSYGVVLLELLTGRA-PVQPLDQGGDLVTWV---RNFIRNNSLV 1036 (1114)
Q Consensus 983 E~~~~~~--------------------~--~~~~DvwslGvil~el~tg~~-p~~~~~~~~~~~~~~---~~~~~~~~~~ 1036 (1114)
|.+.... + ..+.||||+||++|||++|.. ||............. ...++.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~---- 455 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM---- 455 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh----
Confidence 9875322 1 124799999999999999874 664322111000000 000000
Q ss_pred cccccccccCCCcccHHHHHHHHHHHhhccCCCC---CCCCCHHHHHH
Q 001253 1037 SGMLDARLNLQDEKTVSHMITVLKIAMLCTNISP---FDRPTMREVVL 1081 (1114)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 1081 (1114)
....... ............+++.+++..+| .+|+|++|+++
T Consensus 456 --~~~~~~~--~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 456 --YKGQKYD--FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred --hcccCCC--cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0000111 01111233467889999998765 68999999874
No 403
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=256.76 Aligned_cols=267 Identities=23% Similarity=0.292 Sum_probs=200.4
Q ss_pred CcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC-----ceE
Q 001253 811 FDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG-----SNL 884 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 884 (1114)
.+-.+.||-|+||.||.+++. +|+.||.|++...... -...+.+-+|++++..++|.|++..+++..-.. +.|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~-L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQN-LASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHH-HHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 344568999999999999975 8999999998654322 223456778999999999999999888765432 468
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+++|.|.. +|..++- ....++...+.-+.+||++||.|||+. +|.||||||.|.|++.+..+||||||+|+..+.
T Consensus 134 V~TELmQS-DLHKIIV-SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIV-SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHh-hhhheec-cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 89999965 8888876 456788899999999999999999999 999999999999999999999999999998766
Q ss_pred CCCCccccccccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccc-----
Q 001253 965 PQSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSG----- 1038 (1114)
Q Consensus 965 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1038 (1114)
.....++..+-|..|+|||++.+. .|+.+.||||.||++.|++.++..|......+. .+.+.+.+........
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQ-L~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQ-LQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHH-HHHHHHHhCCCcHHHHHHHhh
Confidence 666667777889999999999875 589999999999999999999988875443222 2222222221111000
Q ss_pred -----cccccccCC-------CcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 001253 1039 -----MLDARLNLQ-------DEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLS 1084 (1114)
Q Consensus 1039 -----~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1084 (1114)
+.....+.. ...+.....+...+.+.++.+||.+|.+..+.+...-
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 000000000 0011223345677888999999999999998876653
No 404
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=280.86 Aligned_cols=264 Identities=27% Similarity=0.348 Sum_probs=198.8
Q ss_pred CcCCceecccCCe-EEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCceEEEEe
Q 001253 811 FDERFVIGRGACG-TVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 811 ~~~~~~lG~G~~g-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
|.-.+++|.|+.| .||+|... |+.||||++-.... ....+|+..++.- +|||||++++.-.++...|+..|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~~------~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEFF------DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHhH------HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 3444578999988 57999987 88999999865442 3456899999888 59999999998888999999999
Q ss_pred cCCCCCHHHHhccCCC---CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---C--CCeEEeeccCce
Q 001253 889 YMARGSLGELLHGASS---TLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD---K--FEAHVGDFGLAK 960 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~--~~~kl~DfG~a~ 960 (1114)
.|.. +|+++++.... .........+..|+++|+++||+. +|||||+||.||||+. + .+++|+|||+++
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 9976 99999985311 111134567889999999999997 9999999999999975 3 468999999999
Q ss_pred ecCCCCC--CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHhcCCccc
Q 001253 961 VIDMPQS--KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTG-RAPVQPLDQGGDLVTWVRNFIRNNSLVS 1037 (1114)
Q Consensus 961 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1114)
..+.... ....+..||.+|+|||++....-+.++||||+||++|+.++| .+||...-.. .. ..+..+.-..
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~----NIl~~~~~L~ 733 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QA----NILTGNYTLV 733 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hh----hhhcCcccee
Confidence 8754332 234567899999999999998888999999999999999995 8999643221 11 1111111111
Q ss_pred ccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHH---------HHHHhhhccCCCcccccCCCCC
Q 001253 1038 GMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVV---------LMLSESNRRQGHFEFSPMDHDS 1102 (1114)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl---------~~L~~i~~~~~~~~~~~~~~~~ 1102 (1114)
.+ .+. .++ ...++|.+|+++||..||+|.+|+ ++|+-++...++.|....+++.
T Consensus 734 ~L-------~~~--~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekrL~Fl~dvSDRvE~e~r~~~s 796 (903)
T KOG1027|consen 734 HL-------EPL--PDC--EAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKRLSFLRDVSDRVEKENRDSPS 796 (903)
T ss_pred ee-------ccC--chH--HHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHHHHHHHhhhhhhhhhhccCch
Confidence 11 011 111 678999999999999999999997 3556666666666666655554
No 405
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=5.3e-28 Score=247.42 Aligned_cols=262 Identities=24% Similarity=0.292 Sum_probs=199.8
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEec------C
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQ------G 881 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 881 (1114)
.+|...+.+|.|+- .|..|.+. .+++||+|+........ ...+...+|...+..+.|+||++++.+|.-. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~-~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQ-THAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccC-ccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 56778888999988 67767655 68999999987774443 3345566799999999999999999998643 3
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
..|+|||+|.. +|...+. ..++-.....+..|++.|+.|+|+. +|+|||+||+||++..+..+||.|||+|+.
T Consensus 95 e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcc
Confidence 56999999976 8988886 4577888999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH--------------
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR-------------- 1027 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~-------------- 1027 (1114)
.+.. -..+..+.+..|+|||++.+..+...+||||.||++.||++|+.-|.+.+.-+.+.+.+.
T Consensus 168 e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~ 245 (369)
T KOG0665|consen 168 EDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ 245 (369)
T ss_pred cCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence 5422 456677899999999999999999999999999999999999998875443222221111
Q ss_pred ----HHHhcCCc------ccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1028 ----NFIRNNSL------VSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1028 ----~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
.+++..+. ...+.|..+....+........+.+++.+|+-.||++|-+++++++
T Consensus 246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 11111000 0011111111111122233446788999999999999999999875
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=5.9e-29 Score=275.89 Aligned_cols=252 Identities=26% Similarity=0.389 Sum_probs=203.1
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
.++|....++|.|.||.||||+++ +++..|||+++-...++ .+-.+.|+-+++..+|||||.++|.|...+..++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 478899999999999999999976 79999999998665544 45567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|||+.+|+|++.-+ ....+++.++..+++...+|++|+|++ +-+|||||-.||++++.|.+|++|||.+..+.. .
T Consensus 91 MEycgggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita-t 165 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA-T 165 (829)
T ss_pred EEecCCCcccceee-ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh-h
Confidence 99999999999887 456899999999999999999999999 889999999999999999999999999887642 2
Q ss_pred CCccccccccccccCcccc---ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccccccc
Q 001253 967 SKSMSAIAGSYGYIAPEYA---YTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDAR 1043 (1114)
Q Consensus 967 ~~~~~~~~g~~~y~aPE~~---~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1114)
-.....+.||+.|||||+. +...|...+|||+.|+...|+-.-++|.....+-. +-...... ....+.
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-----~l~LmTkS----~~qpp~ 236 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-----ALFLMTKS----GFQPPT 236 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-----HHHHhhcc----CCCCCc
Confidence 2344667899999999986 35678999999999999999988777754332211 11111111 111111
Q ss_pred ccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 001253 1044 LNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVV 1080 (1114)
Q Consensus 1044 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1080 (1114)
+ +........+.+|++.|+..+|.+||+++.++
T Consensus 237 l----kDk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 237 L----KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred c----cCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 1 12223445688999999999999999997643
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=5.4e-28 Score=263.76 Aligned_cols=199 Identities=25% Similarity=0.340 Sum_probs=172.0
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChh-----hHHHHHHHHHHHhcCC---CCceeeEEeEEEe
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNN-----VDNSFRAEILTLGKIR---HRNIVKLYGFCYH 879 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 879 (1114)
.+|...+.+|+|+||.|+.|.++ +...|+||.+.+.+.-... ..-.+-.|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 56899999999999999999987 4567999999876532111 1123557999999997 9999999999999
Q ss_pred cCceEEEEecCC-CCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccC
Q 001253 880 QGSNLLMYEYMA-RGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGL 958 (1114)
Q Consensus 880 ~~~~~lv~E~~~-~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~ 958 (1114)
++.+|++||-.. |-+|.+++. ....+++.+...|++||+-|+++||.+ +|||||||-+||.++.+|-+||+|||.
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE-~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE-FKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh-ccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccc
Confidence 999999999765 448999997 445899999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccccccCccccccCCCC-cccchHHHHHHHHHHHhCCCCCC
Q 001253 959 AKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVT-EKCDIYSYGVVLLELLTGRAPVQ 1014 (1114)
Q Consensus 959 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~p~~ 1014 (1114)
|.... ......++||..|.|||++.+.+|- ..-|||++|+++|.++....||+
T Consensus 717 aa~~k---sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 717 AAYTK---SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhhc---CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 98653 4455678999999999999998875 46799999999999999999986
No 408
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=5.1e-28 Score=260.42 Aligned_cols=265 Identities=22% Similarity=0.256 Sum_probs=205.9
Q ss_pred HHHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCC------CceeeEEeEE
Q 001253 805 VVATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRH------RNIVKLYGFC 877 (1114)
Q Consensus 805 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~ 877 (1114)
+....+|.+....|+|-|++|..|.+. .|..||||++...... .+.=..|+++++++.. -|+++++-.|
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F 503 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKFHCLRLFRHF 503 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhhHHHHHHHHh
Confidence 445678999999999999999999976 5789999999765443 2334569999999952 3899999999
Q ss_pred EecCceEEEEecCCCCCHHHHhccCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-CeEEe
Q 001253 878 YHQGSNLLMYEYMARGSLGELLHGASS--TLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF-EAHVG 954 (1114)
Q Consensus 878 ~~~~~~~lv~E~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~ 954 (1114)
....+.|||||.+.- +|.+++++.+. .+....+..++.|+.-||..|-.. +|+|.||||+||||++.. .+|||
T Consensus 504 ~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLC 579 (752)
T KOG0670|consen 504 KHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLC 579 (752)
T ss_pred hhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeec
Confidence 999999999999976 99999986554 678889999999999999999987 999999999999999765 57999
Q ss_pred eccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH--------
Q 001253 955 DFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWV-------- 1026 (1114)
Q Consensus 955 DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~-------- 1026 (1114)
|||.|...... ..+.+.-+..|+|||++.+.+|++..|+||+||++||+.||+..|++......+ ...
T Consensus 580 DfGSA~~~~en---eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML-rl~me~KGk~p 655 (752)
T KOG0670|consen 580 DFGSASFASEN---EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML-RLFMELKGKFP 655 (752)
T ss_pred cCccccccccc---cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH-HHHHHhcCCCc
Confidence 99999875422 233344567899999999999999999999999999999999999866543322 221
Q ss_pred HHHHhcCCcccccccccccCC-----------------------------------CcccHHHHHHHHHHHhhccCCCCC
Q 001253 1027 RNFIRNNSLVSGMLDARLNLQ-----------------------------------DEKTVSHMITVLKIAMLCTNISPF 1071 (1114)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~l~~li~~cl~~dP~ 1071 (1114)
..+++.+.+.++-+|..+.+. +.........+.+++..|+..||+
T Consensus 656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~ 735 (752)
T KOG0670|consen 656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE 735 (752)
T ss_pred HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence 123333333322222221110 112234456788999999999999
Q ss_pred CCCCHHHHHH
Q 001253 1072 DRPTMREVVL 1081 (1114)
Q Consensus 1072 ~RPs~~evl~ 1081 (1114)
+|.|..++++
T Consensus 736 KRit~nqAL~ 745 (752)
T KOG0670|consen 736 KRITVNQALK 745 (752)
T ss_pred hcCCHHHHhc
Confidence 9999998764
No 409
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=9.2e-26 Score=238.74 Aligned_cols=211 Identities=36% Similarity=0.553 Sum_probs=184.6
Q ss_pred ecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCH
Q 001253 817 IGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSL 895 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 895 (1114)
||+|.+|.||++... +++.+++|++....... ..+.+.+|+..++.++|++++++++++......+++|||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999986 48999999997655432 246788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-CCCeEEeeccCceecCCCCCCcccccc
Q 001253 896 GELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD-KFEAHVGDFGLAKVIDMPQSKSMSAIA 974 (1114)
Q Consensus 896 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~ 974 (1114)
.+++......+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++++|||.+........ ......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~ 154 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIV 154 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhccc
Confidence 999985545789999999999999999999998 9999999999999999 89999999999987643221 223356
Q ss_pred ccccccCccccccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHH
Q 001253 975 GSYGYIAPEYAYTM-KVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVS 1053 (1114)
Q Consensus 975 g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1114)
+...|++||..... .++.+.|+|++|++++++
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------- 187 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------- 187 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence 78899999998877 788999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1054 HMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1054 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 257789999999999999999999864
No 410
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2.7e-25 Score=237.96 Aligned_cols=200 Identities=35% Similarity=0.470 Sum_probs=174.1
Q ss_pred CcCCceecccCCeEEEEEEeCC-CcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLRT-GHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|+..+.||+|++|+||+|.... ++.+|+|.+...... ...+.+.+|+..+++++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 5667899999999999999874 899999999765443 2356788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCc
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKS 969 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 969 (1114)
+++++|.+++......+++.....++.+++.++.++|+. +++|+|++|.||+++.++.++|+|||.+..........
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 999999999985443389999999999999999999998 99999999999999999999999999998765432123
Q ss_pred cccccccccccCcccc-ccCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 001253 970 MSAIAGSYGYIAPEYA-YTMKVTEKCDIYSYGVVLLELLTGRAPVQP 1015 (1114)
Q Consensus 970 ~~~~~g~~~y~aPE~~-~~~~~~~~~DvwslGvil~el~tg~~p~~~ 1015 (1114)
.....++..|++||.. ....++.++|||++|++++||++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 3445678899999998 667788899999999999999999999964
No 411
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=3.8e-26 Score=227.63 Aligned_cols=249 Identities=20% Similarity=0.320 Sum_probs=185.3
Q ss_pred cCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeE-EEecCceEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGF-CYHQGSNLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~l 885 (1114)
+.|.+.+.+|+|.||.+-+|+++ +.+.+|+|.+.+.... .++|.+|...--.+ .|.||+.-++. |+..+..++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt----~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT----QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh----HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 67899999999999999999987 6788999999876553 67788888765555 58999987765 566777889
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC--CCCCeEEeeccCceecC
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLD--DKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~--~~~~~kl~DfG~a~~~~ 963 (1114)
++||++.|+|.+-+. ...+.+....+++.|+++|+.|+|+. .+||||||.+||||- +..+||+||||..+..+
T Consensus 100 ~qE~aP~gdL~snv~--~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVE--AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eeccCccchhhhhcC--cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999999999887 35688888999999999999999999 999999999999983 34589999999988644
Q ss_pred CCCCCccccccccccccCccccccC-----CCCcccchHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHhcCCccc
Q 001253 964 MPQSKSMSAIAGSYGYIAPEYAYTM-----KVTEKCDIYSYGVVLLELLTGRAPVQPLDQ-GGDLVTWVRNFIRNNSLVS 1037 (1114)
Q Consensus 964 ~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~DvwslGvil~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 1037 (1114)
. .....-.+..|.|||..... ...+.+|||.||++++.++||..||..... ....++|.+=.-+...
T Consensus 175 ~----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~--- 247 (378)
T KOG1345|consen 175 T----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP--- 247 (378)
T ss_pred c----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc---
Confidence 2 22223345679999977532 356789999999999999999999984432 2233333321111110
Q ss_pred ccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1038 GMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+. +.........++++.++-+.++|++|--..++.+
T Consensus 248 -----~~---P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 248 -----AL---PKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred -----cC---chhhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 11 1111122345777888999999999944444433
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=2.8e-27 Score=247.82 Aligned_cols=407 Identities=23% Similarity=0.254 Sum_probs=209.7
Q ss_pred cCEEEecCCcccCCCCcccCCCCCCCEEEccCCCcccccccccccccccceecccc-ccccCCCCcccccCcccchhhhc
Q 001253 104 LTALDLSFNQLSRNIPKEIGNCSSLEVLNLNNNRLEAHIPKELGNLSSLTILNIYN-NRISGPFPKEIGKLSALSQLVAY 182 (1114)
Q Consensus 104 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~ 182 (1114)
-+.++|..|+|+...|.+|+.+++|++||||+|.|+.+-|++|.+|.+|..|-+.+ |+|+......|++|..|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 37778888888766677788888888888888888877788888887776666555 77875545667778888888777
Q ss_pred ccccCCCCCCCccccccccceeccccccccccCCCCCCCCccceeeccccccCCCCcccccccccccEEEecCCcccCcc
Q 001253 183 SNNISGSLPPTLGNLKRLKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPKEIGMLKYLTDVILWGNQLSGVI 262 (1114)
Q Consensus 183 ~n~i~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 262 (1114)
-|++.-...++|..|++|..|.+-+|.+...--..|..+.+++.+.+..|.+- ...+++.+.. +....
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~-------~~a~~ 216 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLAD-------DLAMN 216 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc-----cccccchhhh-------HHhhc
Confidence 77777666677777777777777777777333336777777777777777632 1111211111 00012
Q ss_pred ccccccccccchhhcccccccCCchhhhcC-CCccceeeecccccccccCc-cccccccccccccccccCCCCCchhhhc
Q 001253 263 PKELGNCTSLETLALYDNKQVGQLPKELGS-IGSLKYLYIYRNELNGTIPR-EIGKLSSALEIDFSENSLIGEIPVELSK 340 (1114)
Q Consensus 263 p~~l~~l~~L~~L~Ls~N~~~~~~p~~~~~-l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~ls~N~l~~~~~~~l~~ 340 (1114)
|.+++...-..-..+.++++...-+..|.. +..+..=..+.+...+..|. .|..+++|+.|+|++|++++.-+.+|..
T Consensus 217 ~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~ 296 (498)
T KOG4237|consen 217 PIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEG 296 (498)
T ss_pred hhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcc
Confidence 222333333333333333322222222211 11111111111212222221 2444444445555555554444445555
Q ss_pred ccccceeecccccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCCcccCCC-CCCCC--------
Q 001253 341 ILGLELLYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGI-PQRLG-------- 411 (1114)
Q Consensus 341 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~-------- 411 (1114)
+..++.|+|..|+|..+....|..+..|+.|+|.+|+|+...|..|..+..|.+|+|..|.+.-.. -.+++
T Consensus 297 ~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~ 376 (498)
T KOG4237|consen 297 AAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSV 376 (498)
T ss_pred hhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCC
Confidence 555555555555555444455555555555555555555555555555555555555555442110 00010
Q ss_pred -------cCccceEEEeecccccCC---CCccccccCccceeeeccCCccCCcCcccccCCcceEEe-eccceeeccCCc
Q 001253 412 -------AYSQLWVVDLSDNHLTGK---IPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLR-LGGNSFTGSFPS 480 (1114)
Q Consensus 412 -------~l~~L~~L~Ls~N~l~~~---~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~p~ 480 (1114)
.-..++.++++++.+... .|+..+- . ..+.+-..++-+.+.. .|++.+. .+|.
T Consensus 377 ~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~--------------~-~s~~cP~~c~c~~tVvRcSnk~lk-~lp~ 440 (498)
T KOG4237|consen 377 VGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGC--------------L-TSSPCPPPCTCLDTVVRCSNKLLK-LLPR 440 (498)
T ss_pred CCCCCCCCCchhccccchhccccccccCCccccCC--------------C-CCCCCCCCcchhhhhHhhcccchh-hcCC
Confidence 011223333333332211 0000000 0 0011112223333222 2233332 4443
Q ss_pred hhhccccccEeecccccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeecccc
Q 001253 481 DLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSN 544 (1114)
Q Consensus 481 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 544 (1114)
.+- ....+|++++|.++ .+|.. .+..| .+|+|+|+|+......|.++++|.+|-|++|
T Consensus 441 ~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 441 GIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred CCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 332 23556777777777 55555 55666 7777777777555556677777777766665
No 413
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=3e-25 Score=236.53 Aligned_cols=263 Identities=25% Similarity=0.367 Sum_probs=194.9
Q ss_pred HhcCCcCCceecccCCeEEEEEEeC----CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecC
Q 001253 807 ATDNFDERFVIGRGACGTVYRAVLR----TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 807 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 881 (1114)
..+.|..+++||+|.|++||+|++. ..+.||+|.+...... ..+..|++++..+ .+.||+++.+++...+
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p-----~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP-----SRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc-----hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 4567899999999999999999954 3678999999876653 4578899999999 5899999999999999
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-CCCeEEeeccCce
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD-KFEAHVGDFGLAK 960 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG~a~ 960 (1114)
...+|+||++..+..++.. .++..++....+.+..||+++|.. |||||||||.|++.+. .++-.|+|||+|.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred eeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHH
Confidence 9999999999999888886 466889999999999999999999 9999999999999974 5678999999996
Q ss_pred ecCC----------------C-----------------CC----------CccccccccccccCcccccc-CCCCcccch
Q 001253 961 VIDM----------------P-----------------QS----------KSMSAIAGSYGYIAPEYAYT-MKVTEKCDI 996 (1114)
Q Consensus 961 ~~~~----------------~-----------------~~----------~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv 996 (1114)
..+. + .. ......+||++|+|||++.. ..-+.++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 2210 0 00 01123469999999999875 446789999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCC-HHHHHHHH----Hhc-----CC--ccc--c---c---------cc-cccc----
Q 001253 997 YSYGVVLLELLTGRAPVQPLDQGGD-LVTWVRNF----IRN-----NS--LVS--G---M---------LD-ARLN---- 1045 (1114)
Q Consensus 997 wslGvil~el~tg~~p~~~~~~~~~-~~~~~~~~----~~~-----~~--~~~--~---~---------~~-~~~~---- 1045 (1114)
||.|||+.-+++++.||....+.-+ +.+.+.-+ +++ +. +.+ . + ++ ....
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999999864443322 22222100 000 11 000 0 0 00 0000
Q ss_pred ---CCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1046 ---LQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1046 ---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
............+++++.+|+..||.+|.|+++.++
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000111112236889999999999999999998764
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=2e-26 Score=241.53 Aligned_cols=416 Identities=22% Similarity=0.188 Sum_probs=252.1
Q ss_pred CCcccccccccccEEEecCCcccCccccccccccccchhhcccccccCCchhhhcCCCccceeeecc-cccccccCcccc
Q 001253 237 EIPKEIGMLKYLTDVILWGNQLSGVIPKELGNCTSLETLALYDNKQVGQLPKELGSIGSLKYLYIYR-NELNGTIPREIG 315 (1114)
Q Consensus 237 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~l~ 315 (1114)
.+|..+. ..-++++|..|+|+.+.|.+|+.+.+|+.||||+|.|..+-|++|..+.+|..|-+.+ |+|+......|+
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~ 137 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFG 137 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhh
Confidence 4554432 2456778888888877777888888888888888888878888888777777776666 677644444566
Q ss_pred ccccccccccccccCCCCCchhhhcccccceeecccccccCcccccccccccCCEEEcccccccccccCccccccceeee
Q 001253 316 KLSSALEIDFSENSLIGEIPVELSKILGLELLYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIML 395 (1114)
Q Consensus 316 ~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 395 (1114)
.+.+++.|.+.-|++.-.....|..+++|..|.+.+|.+..+....|..+..++.+.+..|.+-. .++++.+..
T Consensus 138 gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dCnL~wla~- 211 (498)
T KOG4237|consen 138 GLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DCNLPWLAD- 211 (498)
T ss_pred hHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----ccccchhhh-
Confidence 66666666666666665555666666666666666666664444566666666666666665320 111221111
Q ss_pred eccCCcccCCCCCCCCcCccceEEEeecccccCCCCccccc-cCccce-eeeccCCccCCcCcccccCCcceEEeeccce
Q 001253 396 QLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICR-NTSLIF-LNLETNKLTGSIPTGVTRCKSLVQLRLGGNS 473 (1114)
Q Consensus 396 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 473 (1114)
+....|..++++.-..-..+.++++..+.+..|.. +..+.. +....+.........|..+++|+.|+|++|+
T Consensus 212 ------~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~ 285 (498)
T KOG4237|consen 212 ------DLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNK 285 (498)
T ss_pred ------HHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCc
Confidence 11122333444444444455555555444443322 122221 2222223332233468888999999999999
Q ss_pred eeccCCchhhccccccEeecccccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeeccccccccccc--
Q 001253 474 FTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIP-- 551 (1114)
Q Consensus 474 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-- 551 (1114)
++++.+.+|.++..+++|.|..|+|...-...|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+.-..-
T Consensus 286 i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~ 365 (498)
T KOG4237|consen 286 ITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLA 365 (498)
T ss_pred cchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchH
Confidence 998888899999999999999999987777788889999999999999998888899988899999888887642110
Q ss_pred ---cccc-----------ccccceEEECccccccC---CCchhhhhcccCCeeeccCccCCCccccccccccccccc-cc
Q 001253 552 ---LEIF-----------SCKMLQRLDLSWNKFVG---ALPREIGSLFQLELLKLSENELSGSIPVQIGNLSRLTEL-QM 613 (1114)
Q Consensus 552 ---~~~~-----------~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L-~l 613 (1114)
+++. +-..++.++++.+.+.. ..|++.+-.+ .+..-..++-+.+. .-
T Consensus 366 wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~---------------s~~cP~~c~c~~tVvRc 430 (498)
T KOG4237|consen 366 WLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLT---------------SSPCPPPCTCLDTVVRC 430 (498)
T ss_pred HHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCC---------------CCCCCCCcchhhhhHhh
Confidence 1100 01123334444333321 1111111000 00011122333333 23
Q ss_pred CCCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcccccCCCCccccccccceEEeccC
Q 001253 614 GGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLSGEIPGSFVNLSSLLGCNFSYN 689 (1114)
Q Consensus 614 s~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~ls~N 689 (1114)
|++.+. .+|..+..-. .+|.|.+|.++. +|.+ .+.+| .+|||+|+|+..-.-+|.+++.|.+|-+|||
T Consensus 431 Snk~lk-~lp~~iP~d~---telyl~gn~~~~-vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 431 SNKLLK-LLPRGIPVDV---TELYLDGNAITS-VPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred cccchh-hcCCCCCchh---HHHhcccchhcc-cCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 333333 4444333222 257777888773 4655 56677 7888888888777777888888888888886
No 415
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3.5e-25 Score=220.28 Aligned_cols=259 Identities=23% Similarity=0.344 Sum_probs=200.3
Q ss_pred CCCCCCHHHHHHHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEE
Q 001253 795 PKEGFTFKDLVVATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLY 874 (1114)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 874 (1114)
...++++.++.. .-+|.+...|..|+|+|+ |..+++|++.... ......++|.+|.-.++-+.||||.+++
T Consensus 183 r~~gid~~~lnl-------~tkl~e~hsgelwrgrwq-gndivakil~vr~-~t~risrdfneefp~lrifshpnilpvl 253 (448)
T KOG0195|consen 183 RYTGIDVSSLNL-------ITKLAESHSGELWRGRWQ-GNDIVAKILNVRE-VTARISRDFNEEFPALRIFSHPNILPVL 253 (448)
T ss_pred cccCcchhhhhh-------hhhhccCCCccccccccc-Ccchhhhhhhhhh-cchhhcchhhhhCcceeeecCCchhhhh
Confidence 344555554433 347899999999999998 6778888876443 3345567899999999999999999999
Q ss_pred eEEEecCceEEEEecCCCCCHHHHhccCCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEE
Q 001253 875 GFCYHQGSNLLMYEYMARGSLGELLHGASS-TLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHV 953 (1114)
Q Consensus 875 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 953 (1114)
+.|.......++..||+.|+|+..+++... ..+..++.+++.++|+|++|||+. .+-|.---+..+.|++|++.+++|
T Consensus 254 gacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltari 332 (448)
T KOG0195|consen 254 GACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARI 332 (448)
T ss_pred hhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhe
Confidence 999999999999999999999999996544 578889999999999999999997 444555578899999999998877
Q ss_pred e--eccCceecCCCCCCccccccccccccCccccccCCCC---cccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 001253 954 G--DFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVT---EKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRN 1028 (1114)
Q Consensus 954 ~--DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~---~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~ 1028 (1114)
. |--++.. .....-.|.||+||.+...+.+ .++|+|||++++||+.|+..||.....-+
T Consensus 333 smad~kfsfq--------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspme-------- 396 (448)
T KOG0195|consen 333 SMADTKFSFQ--------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME-------- 396 (448)
T ss_pred ecccceeeee--------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh--------
Confidence 4 2222211 1122346789999999876644 47999999999999999999998655311
Q ss_pred HHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1029 FIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
.++.-.....+...++.....+.+++.-|++.||.+||.+..++-.|++++
T Consensus 397 --------cgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 397 --------CGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred --------hhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 112112222334456666778899999999999999999999999999864
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=8.6e-24 Score=274.71 Aligned_cols=345 Identities=24% Similarity=0.274 Sum_probs=232.5
Q ss_pred cccccCcccchhhhccc------ccCCCCCCCccccc-cccceeccccccccccCCCCCCCCccceeeccccccCCCCcc
Q 001253 168 KEIGKLSALSQLVAYSN------NISGSLPPTLGNLK-RLKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPK 240 (1114)
Q Consensus 168 ~~~~~l~~L~~L~l~~n------~i~~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 240 (1114)
.+|.+|++|+.|.+..+ ++...+|..+..++ +|+.|++.++.+. .+|..+ ...+|++|+|++|++. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 34455555555555433 23334566666553 5777777777765 667666 4578888888888877 6777
Q ss_pred cccccccccEEEecCCcccCccccccccccccchhhcccccccCCchhhhcCCCccceeeecccccccccCccccccccc
Q 001253 241 EIGMLKYLTDVILWGNQLSGVIPKELGNCTSLETLALYDNKQVGQLPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSA 320 (1114)
Q Consensus 241 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 320 (1114)
.+..+++|+.|+|+++...+.+|. ++.+++|+.|+|++|.....+|..++.+++|++|++++|.....+|..+ ++++|
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 777888888888887654445563 7777888888888877777778788888888888888765444666554 56777
Q ss_pred cccccccccCCCCCchhhhcccccceeecccccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCC
Q 001253 321 LEIDFSENSLIGEIPVELSKILGLELLYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDN 400 (1114)
Q Consensus 321 ~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 400 (1114)
+.|++++|...+.+|.. ..+|+.|++++|.+.. +|..+ .+++|++|+++++.... +..
T Consensus 707 ~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~-lP~~~-~l~~L~~L~l~~~~~~~-l~~---------------- 764 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPDI---STNISWLDLDETAIEE-FPSNL-RLENLDELILCEMKSEK-LWE---------------- 764 (1153)
T ss_pred CEEeCCCCCCccccccc---cCCcCeeecCCCcccc-ccccc-cccccccccccccchhh-ccc----------------
Confidence 77777776554444432 2345566666666543 23222 34555555555433211 100
Q ss_pred cccCCCCCCCCcCccceEEEeecccccCCCCccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCc
Q 001253 401 SLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPS 480 (1114)
Q Consensus 401 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 480 (1114)
.+....+..+...++|+.|+|++|...+.+|..+.++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.
T Consensus 765 ~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~ 843 (1153)
T PLN03210 765 RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD 843 (1153)
T ss_pred cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc
Confidence 1111112222334678888888887777788888888888888888875544677665 688889999988765555554
Q ss_pred hhhccccccEeecccccCCCCccccccccccCcEEEecC-ceeccCCCccccCCCCcceeeccccc
Q 001253 481 DLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSD-NYFTGELPREVGNLSNLVTFNVSSNF 545 (1114)
Q Consensus 481 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~ 545 (1114)
. ..+|++|+|++|.|+ .+|.++..+++|+.|+|++ |+++ .+|..+..+++|+.+++++|.
T Consensus 844 ~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 844 I---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred c---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 3 367889999999998 6788899999999999988 5565 577788889999999988774
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1e-23 Score=273.93 Aligned_cols=337 Identities=21% Similarity=0.246 Sum_probs=209.0
Q ss_pred CCCCCCccceeeccccc------cCCCCcccccccc-cccEEEecCCcccCccccccccccccchhhcccccccCCchhh
Q 001253 217 EIGGCESLQYLGLAQNQ------LSGEIPKEIGMLK-YLTDVILWGNQLSGVIPKELGNCTSLETLALYDNKQVGQLPKE 289 (1114)
Q Consensus 217 ~l~~l~~L~~L~Ls~N~------l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~p~~ 289 (1114)
+|.++++|+.|.+..+. +...+|..+..++ +|+.|++.++.++ .+|..+ ...+|++|++++|++. .++..
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~ 629 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDG 629 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccc
Confidence 34445555555544332 1122344444432 3555555555544 334433 3445555555555432 34444
Q ss_pred hcCCCccceeeecccccccccCccccccccccccccccccCCCCCchhhhcccccceeecccccccCcccccccccccCC
Q 001253 290 LGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLFENKLTGVIPVELTTLKNLT 369 (1114)
Q Consensus 290 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 369 (1114)
+..+++|++|+|+++.....+|. ++.+++|+.|++++|.....+|..+..+++|+.|++++|..-..+|..+ ++++|+
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~ 707 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLY 707 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCC
Confidence 44555555555555433334442 4445555555555554444555555555555555555543333334333 455666
Q ss_pred EEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccc-------cCCCCccccccCccce
Q 001253 370 KLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHL-------TGKIPRHICRNTSLIF 442 (1114)
Q Consensus 370 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-------~~~~~~~~~~~~~L~~ 442 (1114)
.|++++|.....+|.. .++|++|++++|.+. .+|..+ .+++|++|+++++.. ....+..+...++|+.
T Consensus 708 ~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~ 782 (1153)
T PLN03210 708 RLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTR 782 (1153)
T ss_pred EEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchh
Confidence 6666665443344422 345566666666654 233333 355666666655322 1122222334578999
Q ss_pred eeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEEecCcee
Q 001253 443 LNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYF 522 (1114)
Q Consensus 443 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 522 (1114)
|+|++|...+.+|..++++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.. ..+|+.|+|++|.|
T Consensus 783 L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i 858 (1153)
T PLN03210 783 LFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGI 858 (1153)
T ss_pred eeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCC
Confidence 9999998888899999999999999999986555788776 7899999999998655456653 46899999999999
Q ss_pred ccCCCccccCCCCcceeeccc-ccccccccccccccccceEEECcccc
Q 001253 523 TGELPREVGNLSNLVTFNVSS-NFLTGRIPLEIFSCKMLQRLDLSWNK 569 (1114)
Q Consensus 523 ~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~ 569 (1114)
+ .+|.++..+++|+.|+|++ |.+. .+|..+..++.|+.|++++|.
T Consensus 859 ~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 859 E-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred c-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 8 6899999999999999999 4555 688888999999999999874
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1e-23 Score=252.97 Aligned_cols=263 Identities=30% Similarity=0.356 Sum_probs=157.4
Q ss_pred ccCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccccCCCCccccccCccceeee
Q 001253 366 KNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICRNTSLIFLNL 445 (1114)
Q Consensus 366 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L 445 (1114)
..-..|+|+.|.++ .+|..+. ++|+.|++.+|+++. +|. ..++|++|+|++|+|+.
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts----------------- 256 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS----------------- 256 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-----------------
Confidence 34567888888887 4555543 356666666666653 232 12445555555555552
Q ss_pred ccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEEecCceeccC
Q 001253 446 ETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGE 525 (1114)
Q Consensus 446 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 525 (1114)
+|.. .++|+.|++++|.++ .+|..+ .+|+.|++++|+|+ .+|.. +++|+.|+|++|+|++
T Consensus 257 --------LP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~- 316 (788)
T PRK15387 257 --------LPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS- 316 (788)
T ss_pred --------ccCc---ccccceeeccCCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-
Confidence 2221 234455555555544 233221 34555555666555 23331 3456666666666663
Q ss_pred CCccccCCCCcceeecccccccccccccccccccceEEECccccccCCCchhhhhcccCCeeeccCccCCCccccccccc
Q 001253 526 LPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELSGSIPVQIGNL 605 (1114)
Q Consensus 526 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 605 (1114)
+|.. ..+|+.|++++|.|+ .+|.. ..+|+.|+|++|+|+ .+|.. ..+|+.|++++|+|+ .+|...
T Consensus 317 Lp~l---p~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~-~LP~l~--- 381 (788)
T PRK15387 317 LPAL---PSELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLT-SLPALP--- 381 (788)
T ss_pred CCCC---cccccccccccCccc-ccccc---ccccceEecCCCccC-CCCCC---Ccccceehhhccccc-cCcccc---
Confidence 3332 124556666666665 34431 135667777777776 34432 235666777777777 355432
Q ss_pred ccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcccccCCCCccccccccceEE
Q 001253 606 SRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLSGEIPGSFVNLSSLLGCN 685 (1114)
Q Consensus 606 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~ 685 (1114)
.+|+.|++++|+|++ +|... +.|+ .|++|+|+|++ +|.. ..+|+.|+|++|+|+ .+|.++.++++|..|+
T Consensus 382 ~~L~~LdLs~N~Lt~-LP~l~---s~L~-~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~Ld 451 (788)
T PRK15387 382 SGLKELIVSGNRLTS-LPVLP---SELK-ELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 451 (788)
T ss_pred cccceEEecCCcccC-CCCcc---cCCC-EEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEE
Confidence 457777778887773 55433 3455 57788888875 4643 246788999999998 7888899999999999
Q ss_pred eccCcccCCCCC
Q 001253 686 FSYNNLTGPIPS 697 (1114)
Q Consensus 686 ls~N~l~g~ip~ 697 (1114)
|++|+|+|.+|.
T Consensus 452 Ls~N~Ls~~~~~ 463 (788)
T PRK15387 452 LEGNPLSERTLQ 463 (788)
T ss_pred CCCCCCCchHHH
Confidence 999999988775
No 419
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=6e-23 Score=210.79 Aligned_cols=278 Identities=20% Similarity=0.270 Sum_probs=220.7
Q ss_pred hcCCcCCceecccCCeEEEEEEe-CCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVL-RTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 885 (1114)
.-+|+++++||+|.||+++.|+. -++++||||.-....+ ..+++.|.+..+.+. .++|..++-+..++.+-.+
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~-----APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE-----APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCC-----cchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 35799999999999999999993 4799999998655444 345778888888884 6899998888788888899
Q ss_pred EEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-----CCeEEeeccCce
Q 001253 886 MYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK-----FEAHVGDFGLAK 960 (1114)
Q Consensus 886 v~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-----~~~kl~DfG~a~ 960 (1114)
|+|.+ |.+|+|++..++..++.+++..+|+|++.-++|+|++ .+|+|||||+|+||... ..+.++|||+|+
T Consensus 102 VidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 99998 5699999999999999999999999999999999999 99999999999999743 358999999999
Q ss_pred ecCCCCCCc------cccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC
Q 001253 961 VIDMPQSKS------MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS 1034 (1114)
Q Consensus 961 ~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1034 (1114)
.+.++.... .....||.+||+-....+.+-+.+-|+-|+|=++...+-|..||.+......-.++ +.+.+.
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kY--eKIGe~- 254 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKY--EKIGET- 254 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHH--HHhccc-
Confidence 887665432 34567999999999999999999999999999999999999999988765432222 111110
Q ss_pred cccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCCCCcc
Q 001253 1035 LVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDHDSDQ 1104 (1114)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~ 1104 (1114)
.....+...++..+ .++..-++..-+.+-.+-|..+-+...+.++-.+.+.-++..+||+...
T Consensus 255 ----Kr~T~i~~Lc~g~P---~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 255 ----KRSTPIEVLCEGFP---EEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred ----cccCCHHHHHhcCH---HHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 00001110111222 3455555555567788999999999999999999999999999998655
No 420
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=2.4e-23 Score=213.59 Aligned_cols=169 Identities=22% Similarity=0.203 Sum_probs=130.2
Q ss_pred CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcccc
Q 001253 893 GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSA 972 (1114)
Q Consensus 893 gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 972 (1114)
|+|.++++.....+++.++..++.|+++||+|||+. + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc------
Confidence 689999986667799999999999999999999998 5 999999999999999 99998754321
Q ss_pred ccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccH
Q 001253 973 IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTV 1052 (1114)
Q Consensus 973 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1114)
..|++.|||||++.+..++.++|||||||++|||++|+.||............+........ .. ......
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~ 133 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD-------PR---DRSNLE 133 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC-------cc---ccccHH
Confidence 25889999999999999999999999999999999999999654332222222211111100 00 001111
Q ss_pred HHH--HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 001253 1053 SHM--ITVLKIAMLCTNISPFDRPTMREVVLMLSESNR 1088 (1114)
Q Consensus 1053 ~~~--~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1088 (1114)
... ..+.+++.+||+.+|.+||++.|+++.+..+..
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 122 258999999999999999999999998877643
No 421
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-22 Score=228.27 Aligned_cols=276 Identities=21% Similarity=0.264 Sum_probs=211.1
Q ss_pred CCcCCceecccCCeEEEEEEeCCC--cEEEEEEecccCCCChhhHHHHHHHHHHHhcCCC----CceeeEEeEE-EecCc
Q 001253 810 NFDERFVIGRGACGTVYRAVLRTG--HTVAVKKLASNREGNNNVDNSFRAEILTLGKIRH----RNIVKLYGFC-YHQGS 882 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~ 882 (1114)
+|.+.++||+|+||.||.|..... +.+|+|.......... ..+..|..++..+.. +++..+++.. ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 799999999999999999997643 4788888776543321 146678888887762 6899999988 47778
Q ss_pred eEEEEecCCCCCHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-----CCeEEeec
Q 001253 883 NLLMYEYMARGSLGELLHGAS-STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK-----FEAHVGDF 956 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-----~~~kl~Df 956 (1114)
.|+||+.+ |.+|.++..... ..++..+..+++.|++.+|+++|+. |++||||||.|+++... ..+.+.||
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 89999988 569999986554 7899999999999999999999999 99999999999999865 46999999
Q ss_pred cCce--ecCCCCC------Cc-cccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 001253 957 GLAK--VIDMPQS------KS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVR 1027 (1114)
Q Consensus 957 G~a~--~~~~~~~------~~-~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~ 1027 (1114)
|+|+ .+..... .. ...+.||.+|+++....+...+.+.|+||++.++.|+..|..||.............+
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~ 251 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEK 251 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHH
Confidence 9998 3211111 11 2345699999999999999999999999999999999999999976554333222211
Q ss_pred HHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCCCCccc
Q 001253 1028 NFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDHDSDQK 1105 (1114)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~~ 1105 (1114)
. ........ .....+. .+.++...+-..+...+|....+...+++...+.+.....++||+....
T Consensus 252 ~-~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~~~ 316 (322)
T KOG1164|consen 252 D-PRKLLTDR---------FGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVKLR 316 (322)
T ss_pred H-hhhhcccc---------ccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCccccccc
Confidence 1 11100000 0111222 3445555555588999999999999999999998888889999987654
No 422
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=2.8e-24 Score=271.49 Aligned_cols=195 Identities=15% Similarity=0.191 Sum_probs=140.2
Q ss_pred cCCC-CceeeEEeEE-------EecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 001253 864 KIRH-RNIVKLYGFC-------YHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFH 935 (1114)
Q Consensus 864 ~l~h-~niv~l~~~~-------~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 935 (1114)
.++| +||+.++++| ...+.++.+|||++ ++|.++++.....+++.++..++.||++||+|||++ +|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Ceee
Confidence 3445 5788888877 22345678899885 499999986666799999999999999999999998 9999
Q ss_pred cCCCCCCeEECC-------------------CCCeEEeeccCceecCCCC---------------CCccccccccccccC
Q 001253 936 RDIKSNNILLDD-------------------KFEAHVGDFGLAKVIDMPQ---------------SKSMSAIAGSYGYIA 981 (1114)
Q Consensus 936 ~Dlk~~Nill~~-------------------~~~~kl~DfG~a~~~~~~~---------------~~~~~~~~g~~~y~a 981 (1114)
|||||+|||++. ++.+|++|||+++...... ........||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999954 4456666666665321100 001112468889999
Q ss_pred ccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHH
Q 001253 982 PEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKI 1061 (1114)
Q Consensus 982 PE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 1061 (1114)
||++.+..++.++|||||||++|||++|..|+.... ......... ..++ ...........+
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~------~~~~~~~~~------~~~~-------~~~~~~~~~~~~ 244 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS------RTMSSLRHR------VLPP-------QILLNWPKEASF 244 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH------HHHHHHHHh------hcCh-------hhhhcCHHHHHH
Confidence 999999999999999999999999999888764211 111111100 0000 011112345678
Q ss_pred HhhccCCCCCCCCCHHHHHH
Q 001253 1062 AMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1062 i~~cl~~dP~~RPs~~evl~ 1081 (1114)
+.+||+++|.+||++.|+++
T Consensus 245 ~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 245 CLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHhCCCChhhCcChHHHhh
Confidence 88999999999999999975
No 423
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=1.4e-23 Score=251.68 Aligned_cols=268 Identities=29% Similarity=0.343 Sum_probs=170.7
Q ss_pred ccceeecccccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEee
Q 001253 343 GLELLYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLS 422 (1114)
Q Consensus 343 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 422 (1114)
+-..|++++|.++. +|..+. ++|+.|++++|+|+. +|. .+++|++|++++|+|+.. |.. .++|+.|+|+
T Consensus 202 ~~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcc-cCc---ccccceeecc
Confidence 46689999999994 565665 489999999999995 554 358999999999999854 532 4678888999
Q ss_pred cccccCCCCccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCc
Q 001253 423 DNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPI 502 (1114)
Q Consensus 423 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 502 (1114)
+|+|+ .+|..+ ++|+.|++++|+++. +|.. .++|+.|+|++|+|++ +|... .+|+.|++++|+|++ +
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCcccc-cccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-c
Confidence 99887 344322 457777788887773 4432 3567777777777663 33321 245556666666652 3
Q ss_pred cccccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCCchhhhhcc
Q 001253 503 PTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLF 582 (1114)
Q Consensus 503 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 582 (1114)
|.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|+ .+| .. ..
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP------------------------~l---~~ 382 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLP------------------------AL---PS 382 (788)
T ss_pred ccc---ccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCc------------------------cc---cc
Confidence 321 1345555555555552 3321 123444445555444 233 22 13
Q ss_pred cCCeeeccCccCCCcccccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhc
Q 001253 583 QLELLKLSENELSGSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLL 662 (1114)
Q Consensus 583 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 662 (1114)
+|+.|++++|+|++ +|... ++|+.|++++|+|++ +|... ..|+ .|+|++|+|+ .+|..++++++|+.|+|
T Consensus 383 ~L~~LdLs~N~Lt~-LP~l~---s~L~~LdLS~N~Lss-IP~l~---~~L~-~L~Ls~NqLt-~LP~sl~~L~~L~~LdL 452 (788)
T PRK15387 383 GLKELIVSGNRLTS-LPVLP---SELKELMVSGNRLTS-LPMLP---SGLL-SLSVYRNQLT-RLPESLIHLSSETTVNL 452 (788)
T ss_pred ccceEEecCCcccC-CCCcc---cCCCEEEccCCcCCC-CCcch---hhhh-hhhhccCccc-ccChHHhhccCCCeEEC
Confidence 45555666665552 34322 456677777777763 55433 3455 5778888887 46888888888888888
Q ss_pred cCcccccCCCCcccccc
Q 001253 663 NNNHLSGEIPGSFVNLS 679 (1114)
Q Consensus 663 s~N~l~g~ip~~~~~l~ 679 (1114)
++|+|+|.+|..+..+.
T Consensus 453 s~N~Ls~~~~~~L~~l~ 469 (788)
T PRK15387 453 EGNPLSERTLQALREIT 469 (788)
T ss_pred CCCCCCchHHHHHHHHh
Confidence 88888888887765443
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3e-23 Score=203.64 Aligned_cols=281 Identities=19% Similarity=0.246 Sum_probs=216.8
Q ss_pred HHhcCCcCCceecccCCeEEEEEE-eCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCC-CceeeEEeEEEecCce
Q 001253 806 VATDNFDERFVIGRGACGTVYRAV-LRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRH-RNIVKLYGFCYHQGSN 883 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~ 883 (1114)
+...+|.++++||.|+||.+|.|. ..+|+.||||+-...... ..+..|.++.+.+++ ..|..+..+..++..-
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~yn 86 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYN 86 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC-----cchhHHHHHHHHhccCCCCchhhhhccccccc
Confidence 345789999999999999999999 458999999997655442 346678889988876 5677777777888888
Q ss_pred EEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC---CCeEEeeccCce
Q 001253 884 LLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK---FEAHVGDFGLAK 960 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfG~a~ 960 (1114)
.+|||.+ |.+|++++.-+...++..+++..|-|++.-++|+|.+ +++||||||+|+|+.-+ ..+.++|||+|+
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 9999998 5699999988888999999999999999999999999 99999999999999643 468999999998
Q ss_pred ecCCCCC------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCC
Q 001253 961 VIDMPQS------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNS 1034 (1114)
Q Consensus 961 ~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1034 (1114)
.+.+... .......||.+|.+-....+..-+.+.|+-|+|.++..+--|..||.+........++ +.+.+..
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKy--EkI~EkK 240 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKY--EKISEKK 240 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHH--HHHHHhh
Confidence 7643332 2234567999999988888777888999999999999999999999877654432221 1111111
Q ss_pred cccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcccccCCCCCccc
Q 001253 1035 LVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFEFSPMDHDSDQK 1105 (1114)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~~ 1105 (1114)
. ...+...+. ..+.++.-.+..|-..--++-|...-+.+.++-+.+...+..+--+||+.-..
T Consensus 241 ~-----s~~ie~LC~---G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkq 303 (341)
T KOG1163|consen 241 M-----STPIEVLCK---GFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQ 303 (341)
T ss_pred c-----CCCHHHHhC---CCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHH
Confidence 0 111110011 12235667778888888889999999988888887777777777888875443
No 425
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=6.1e-22 Score=220.77 Aligned_cols=168 Identities=23% Similarity=0.201 Sum_probs=130.6
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC--CCcEEEEEEecccCC--CChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecC
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR--TGHTVAVKKLASNRE--GNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQG 881 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 881 (1114)
...++|++.++||+|+||+||+|+++ +++.||||++..... ......+.+.+|++++++++|+|+++.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 34578999999999999999999875 577789998764321 122335668999999999999999853322 24
Q ss_pred ceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC-CCCCeEECCCCCeEEeeccCce
Q 001253 882 SNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDI-KSNNILLDDKFEAHVGDFGLAK 960 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~DfG~a~ 960 (1114)
..|+||||++|++|... ... . ...++.++++||+|+|+. ||+|||| ||+|||++.++.+||+|||+|+
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred CcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 67999999999999732 211 1 145788999999999998 9999999 9999999999999999999999
Q ss_pred ecCCCCC-------CccccccccccccCcccccc
Q 001253 961 VIDMPQS-------KSMSAIAGSYGYIAPEYAYT 987 (1114)
Q Consensus 961 ~~~~~~~-------~~~~~~~g~~~y~aPE~~~~ 987 (1114)
.+..... ....+..+++.|+|||++..
T Consensus 161 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 161 VFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 7643321 11235678889999998864
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=2e-21 Score=235.42 Aligned_cols=183 Identities=26% Similarity=0.455 Sum_probs=87.6
Q ss_pred cceEEEeecccccCCCCccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecc
Q 001253 415 QLWVVDLSDNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELD 494 (1114)
Q Consensus 415 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 494 (1114)
.|+.|+|++|++. .+|..+. .+|+.|++++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQ 312 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhc
Confidence 4555555555555 3343332 24555566655555 3444332 35556666666555 2333322 245556666
Q ss_pred cccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCC
Q 001253 495 QNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGAL 574 (1114)
Q Consensus 495 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 574 (1114)
+|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+
T Consensus 313 ~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 313 SNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NL 382 (754)
T ss_pred CCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CC
Confidence 666652 333221 455566666666553 444332 45555555555555 3444331 34555555555555 33
Q ss_pred chhhhhcccCCeeeccCccCCCcccccc----cccccccccccCCCcCC
Q 001253 575 PREIGSLFQLELLKLSENELSGSIPVQI----GNLSRLTELQMGGNSFS 619 (1114)
Q Consensus 575 p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l~~L~~L~ls~N~l~ 619 (1114)
|..+.. .|+.|++++|+|+ .+|..+ +.++++..|++.+|+|+
T Consensus 383 P~~l~~--sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 383 PENLPA--ALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CHhHHH--HHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 443321 3555555555554 333322 22244444555555444
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=2.4e-21 Score=234.62 Aligned_cols=204 Identities=25% Similarity=0.406 Sum_probs=97.5
Q ss_pred cceEEEeecccccCCCCccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecc
Q 001253 415 QLWVVDLSDNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELD 494 (1114)
Q Consensus 415 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 494 (1114)
+|++|++++|+|+ .+|..+. ++|+.|+|++|++. .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|+++
T Consensus 221 nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls 291 (754)
T PRK15370 221 NIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVY 291 (754)
T ss_pred CCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECC
Confidence 4555566666555 2333322 24566666666665 3444332 34555555555554 3343332 244455555
Q ss_pred cccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCC
Q 001253 495 QNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGAL 574 (1114)
Q Consensus 495 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 574 (1114)
+|+|+ + +|..+. ++|+.|++++|.++ .+|..+. ++|+.|++++|.+++ +
T Consensus 292 ~N~Lt------------------------~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~-L 340 (754)
T PRK15370 292 DNSIR------------------------T-LPAHLP--SGITHLNVQSNSLT-ALPETLP--PGLKTLEAGENALTS-L 340 (754)
T ss_pred CCccc------------------------c-Ccccch--hhHHHHHhcCCccc-cCCcccc--ccceeccccCCcccc-C
Confidence 55444 2 232221 23445555555554 2333221 345555555555542 4
Q ss_pred chhhhhcccCCeeeccCccCCCcccccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCcccc--
Q 001253 575 PREIGSLFQLELLKLSENELSGSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELG-- 652 (1114)
Q Consensus 575 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~-- 652 (1114)
|..+. ++|+.|++++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. ..|+ .|++++|+|++ +|..+.
T Consensus 341 P~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~-~LdLs~N~L~~-LP~sl~~~ 410 (754)
T PRK15370 341 PASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQ-IMQASRNNLVR-LPESLPHF 410 (754)
T ss_pred Chhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHH-HHhhccCCccc-CchhHHHH
Confidence 43332 35555555555555 3444332 35555556555555 3444433 2344 45666666653 243332
Q ss_pred --chhhhHhhhccCcccc
Q 001253 653 --NLILLEYLLLNNNHLS 668 (1114)
Q Consensus 653 --~l~~L~~L~Ls~N~l~ 668 (1114)
.++.+..|+|.+|+|+
T Consensus 411 ~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 411 RGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hhcCCCccEEEeeCCCcc
Confidence 2345566666666665
No 428
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.84 E-value=2.1e-19 Score=205.34 Aligned_cols=262 Identities=32% Similarity=0.406 Sum_probs=202.6
Q ss_pred CcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCC-ceeeEEeEEEecCceEEEEec
Q 001253 811 FDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHR-NIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~E~ 889 (1114)
|.....||.|+||.||++... ..+|+|.+.............+.+|+..++.+.|+ +++++.+++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999987 78999999877665544567789999999999988 799999999777778999999
Q ss_pred CCCCCHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-CeEEeeccCceecCCCC
Q 001253 890 MARGSLGELLHGAS--STLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF-EAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG~a~~~~~~~ 966 (1114)
+.++++.+++.... ..+.......+..|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999998777444 2789999999999999999999999 899999999999999998 79999999998654333
Q ss_pred CC-----ccccccccccccCcccccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccc
Q 001253 967 SK-----SMSAIAGSYGYIAPEYAYT---MKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSG 1038 (1114)
Q Consensus 967 ~~-----~~~~~~g~~~y~aPE~~~~---~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1114)
.. ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||........... ....+......
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~-- 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQ-TLKIILELPTP-- 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHH-HHHHHHhcCCc--
Confidence 22 3456789999999999987 5788899999999999999999999764443101111 11111111100
Q ss_pred cccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 001253 1039 MLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLM 1082 (1114)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1082 (1114)
....... ..........+.+++.+|+..+|..|.++.+....
T Consensus 234 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 SLASPLS--PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccccC--ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0000000 00002223467889999999999999999887764
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2.3e-21 Score=230.83 Aligned_cols=255 Identities=21% Similarity=0.245 Sum_probs=188.5
Q ss_pred CCceecccCCeEEEEEEeC-CCcEEEEEEecc---cCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 813 ERFVIGRGACGTVYRAVLR-TGHTVAVKKLAS---NREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 813 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~---~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
..+++|.|++|.|+.+... ..+.++.|.+.. ...........+..|+-+-..+.|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4568999999988888754 344455554431 111111112225567777888999999888877777666666699
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCC-
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQS- 967 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~- 967 (1114)
|+++ +|..++... ..++..++-.++.|+..|+.|+|.. |+.|||+|++|+++..+|.+||+|||.+..+..+..
T Consensus 402 ~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred cccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 9999 999999733 4788899999999999999999999 999999999999999999999999999987765444
Q ss_pred --CccccccccccccCccccccCCCCc-ccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccc
Q 001253 968 --KSMSAIAGSYGYIAPEYAYTMKVTE-KCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARL 1044 (1114)
Q Consensus 968 --~~~~~~~g~~~y~aPE~~~~~~~~~-~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1114)
......+|+..|+|||++.+..|++ ..||||.|+++..|.+|+.||......++..... .+...... .
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~-------~~~~~~~~--~ 547 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN-------NYSDQRNI--F 547 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh-------cccccccc--c
Confidence 3456788999999999999999987 5899999999999999999997655443322000 00000000 0
Q ss_pred cCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1045 NLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1045 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
................++.+++++||.+|.|+++|++
T Consensus 548 ~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 548 EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0000111223345677899999999999999999875
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=2.1e-20 Score=193.12 Aligned_cols=175 Identities=14% Similarity=0.135 Sum_probs=138.2
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHH------HHHHHHHHhcCCCCceeeEEeEEEe
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNS------FRAEILTLGKIRHRNIVKLYGFCYH 879 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~------~~~E~~~l~~l~h~niv~l~~~~~~ 879 (1114)
...++|+..+++|.|+||.||.+.. ++..+|||++.......+...+. +++|+..+.+++||+|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 4578999999999999999999766 57789999998766555443333 6899999999999999999988664
Q ss_pred c--------CceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCe
Q 001253 880 Q--------GSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEA 951 (1114)
Q Consensus 880 ~--------~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 951 (1114)
. +..++||||++|.+|.++.. .+. ....+++.++..+|+. |++|||++|.||+++.++ +
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence 3 35789999999999988742 222 2455899999999999 999999999999999988 9
Q ss_pred EEeeccCceecCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHH
Q 001253 952 HVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELL 1007 (1114)
Q Consensus 952 kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 1007 (1114)
+++|||.++........ ..+.....+..++|+|++|+++....
T Consensus 174 ~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999988754311111 11344555778999999999986654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=7.7e-20 Score=187.91 Aligned_cols=143 Identities=17% Similarity=0.136 Sum_probs=110.6
Q ss_pred CceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhh-----------------------HHHHHHHHHHHhcCCCCce
Q 001253 814 RFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNV-----------------------DNSFRAEILTLGKIRHRNI 870 (1114)
Q Consensus 814 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~-----------------------~~~~~~E~~~l~~l~h~ni 870 (1114)
...||+|+||+||+|...+|+.||||+++......... ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999999998889999999997653221110 1122358999999987776
Q ss_pred eeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEecCCCCCCeEECCCC
Q 001253 871 VKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYL-HHDCKPRIFHRDIKSNNILLDDKF 949 (1114)
Q Consensus 871 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk~~Nill~~~~ 949 (1114)
.....+.. ...++||||++++++..... ....++......++.|++.+|+|+ |+. ||+||||||+||+++ ++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL-KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh-hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CC
Confidence 44333222 23489999999987765432 235788999999999999999999 677 999999999999998 47
Q ss_pred CeEEeeccCceecC
Q 001253 950 EAHVGDFGLAKVID 963 (1114)
Q Consensus 950 ~~kl~DfG~a~~~~ 963 (1114)
.++|+|||+|...+
T Consensus 155 ~v~LiDFG~a~~~~ 168 (190)
T cd05147 155 KLYIIDVSQSVEHD 168 (190)
T ss_pred cEEEEEccccccCC
Confidence 89999999998654
No 432
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=4.8e-21 Score=224.44 Aligned_cols=254 Identities=21% Similarity=0.192 Sum_probs=184.2
Q ss_pred CCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCCh-hhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEe
Q 001253 810 NFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNN-NVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYE 888 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 888 (1114)
+|...+.+|.+.|=+|.+|+++.|. |+||++.+...... +...+...|++ ...++|||++++..+-..+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667788999999999999999887 99999987653221 11222223444 566799999999888777888899999
Q ss_pred cCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecC--CCC
Q 001253 889 YMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVID--MPQ 966 (1114)
Q Consensus 889 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~--~~~ 966 (1114)
|+.. +|+|.+. -+..+...+.+.|+.|++.|+..+|.. ||+|||||.+|||++.-..+.|+||...+..- .+.
T Consensus 102 yvkh-nLyDRlS-TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS-TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHhh-hhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9977 9999997 345788888999999999999999999 99999999999999999999999999776432 222
Q ss_pred CCccc----cccccccccCccccccC----------C-CCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHH
Q 001253 967 SKSMS----AIAGSYGYIAPEYAYTM----------K-VTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFI 1030 (1114)
Q Consensus 967 ~~~~~----~~~g~~~y~aPE~~~~~----------~-~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 1030 (1114)
+.... +......|.|||.+... . .+++.||||+||+++|+++ |++||.-. .+..+-
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aYr---- 248 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAYR---- 248 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhHh----
Confidence 22222 22344579999987531 1 5678999999999999998 67777411 111111
Q ss_pred hcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 001253 1031 RNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESN 1087 (1114)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1087 (1114)
+.+... ...-+....+ ..++.++..|++.||++|.+|++.++.-+...
T Consensus 249 ~~~~~~---~e~~Le~Ied------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 249 SGNADD---PEQLLEKIED------VSLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred ccCccC---HHHHHHhCcC------ccHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 100000 0000000011 14678999999999999999999998865543
No 433
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=3e-19 Score=190.11 Aligned_cols=234 Identities=20% Similarity=0.245 Sum_probs=154.4
Q ss_pred CCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCC----------CceeeEEeEEE
Q 001253 810 NFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRH----------RNIVKLYGFCY 878 (1114)
Q Consensus 810 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 878 (1114)
.+...+.||.|+++.||.+++. +|+.+|+|++...........+++++|.-....+.+ -.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3556678999999999999987 689999999987776555567778877766655432 12333333322
Q ss_pred e---------cC--------ceEEEEecCCCCCHHHHhc---cCCC---CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 001253 879 H---------QG--------SNLLMYEYMARGSLGELLH---GASS---TLDWQTRFMIALGAAEGLSYLHHDCKPRIFH 935 (1114)
Q Consensus 879 ~---------~~--------~~~lv~E~~~~gsL~~~l~---~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 935 (1114)
. .. ..+++|+-+.+ +|.+++. .... ......+..+..|+++.+++||+. |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 1 11 22678888855 9988864 1121 244556677889999999999999 9999
Q ss_pred cCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccccccccCcccccc--------CCCCcccchHHHHHHHHHHH
Q 001253 936 RDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYT--------MKVTEKCDIYSYGVVLLELL 1007 (1114)
Q Consensus 936 ~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DvwslGvil~el~ 1007 (1114)
+||+|+|++++.+|.++|+||+.....+.. ......+..|.+||.... ..++.+.|.|++|+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTR----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEE----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCce----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 999999999999999999999988764421 111345578999997644 34788999999999999999
Q ss_pred hCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCC
Q 001253 1008 TGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDR 1073 (1114)
Q Consensus 1008 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1073 (1114)
+|+.||.......... + .+.. + . .....+..+|..+++++|++|
T Consensus 245 C~~lPf~~~~~~~~~~-~------------~f~~------C--~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPE-W------------DFSR------C--R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSG-G------------GGTT------S--S----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCcccccc-c------------cchh------c--C-CcCHHHHHHHHHHccCCcccC
Confidence 9999997543222100 0 0101 1 1 344568889999999999988
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=4.1e-21 Score=178.92 Aligned_cols=186 Identities=35% Similarity=0.570 Sum_probs=162.0
Q ss_pred CCCCCCCccCEEEecCCcccCCCCcccCCCCCCCEEEccCCCcccccccccccccccceeccccccccCCCCcccccCcc
Q 001253 96 PNIGGLVHLTALDLSFNQLSRNIPKEIGNCSSLEVLNLNNNRLEAHIPKELGNLSSLTILNIYNNRISGPFPKEIGKLSA 175 (1114)
Q Consensus 96 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 175 (1114)
+.+.++++++.|-||+|.++ .+|+.++.+.+|++|++++|+++ ..|.+++.+++|++|+++-|++. .+|..|+.++.
T Consensus 27 ~gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~ 103 (264)
T KOG0617|consen 27 PGLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPA 103 (264)
T ss_pred ccccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCch
Confidence 44678889999999999997 78889999999999999999999 58889999999999999999998 89999999999
Q ss_pred cchhhhcccccCC-CCCCCccccccccceeccccccccccCCCCCCCCccceeeccccccCCCCcccccccccccEEEec
Q 001253 176 LSQLVAYSNNISG-SLPPTLGNLKRLKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLSGEIPKEIGMLKYLTDVILW 254 (1114)
Q Consensus 176 L~~L~l~~n~i~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 254 (1114)
|+.|++.+|++.. .+|..|..+..|+.|.+++|.+. .+|..++++++|+.|.+.+|.+- .+|++++.++.|++|.+.
T Consensus 104 levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 104 LEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred hhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 9999999999965 58999999999999999999998 89999999999999999999988 799999999999999999
Q ss_pred CCcccCcccccccccc---ccchhhcccccccCCch
Q 001253 255 GNQLSGVIPKELGNCT---SLETLALYDNKQVGQLP 287 (1114)
Q Consensus 255 ~N~l~~~~p~~l~~l~---~L~~L~Ls~N~~~~~~p 287 (1114)
+|+++ .+|++++++. +=+.+.+.+|.....+.
T Consensus 182 gnrl~-vlppel~~l~l~~~k~v~r~E~NPwv~pIa 216 (264)
T KOG0617|consen 182 GNRLT-VLPPELANLDLVGNKQVMRMEENPWVNPIA 216 (264)
T ss_pred cceee-ecChhhhhhhhhhhHHHHhhhhCCCCChHH
Confidence 99999 6777777653 22344455555444333
No 435
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.2e-19 Score=188.66 Aligned_cols=196 Identities=23% Similarity=0.293 Sum_probs=139.1
Q ss_pred CCCceeeEEeEEEe---------------------------cCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHH
Q 001253 866 RHRNIVKLYGFCYH---------------------------QGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGA 918 (1114)
Q Consensus 866 ~h~niv~l~~~~~~---------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i 918 (1114)
+|||||++.++|.+ ....|+||...+. +|.+++. ....+......+..|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~--~~~~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW--TRHRSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh--cCCCchHHHHHHHHHH
Confidence 59999999988743 1234899998876 9999996 3346667778888999
Q ss_pred HHHHHHHHhCCCCCeEecCCCCCCeEE--CCCC--CeEEeeccCceecCC-----CCCCccccccccccccCccccccCC
Q 001253 919 AEGLSYLHHDCKPRIFHRDIKSNNILL--DDKF--EAHVGDFGLAKVIDM-----PQSKSMSAIAGSYGYIAPEYAYTMK 989 (1114)
Q Consensus 919 ~~~L~~LH~~~~~~ivH~Dlk~~Nill--~~~~--~~kl~DfG~a~~~~~-----~~~~~~~~~~g~~~y~aPE~~~~~~ 989 (1114)
++|+.|||.+ ||.|||+|.+|||+ |+|+ .+.++|||++-.-+. +.........|.-.-||||+....+
T Consensus 351 LEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 9999999999 99999999999998 4444 468999998753221 1111222345778899999886543
Q ss_pred C------CcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHh
Q 001253 990 V------TEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAM 1063 (1114)
Q Consensus 990 ~------~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 1063 (1114)
- -.|+|.|+.|.+.||+++...||+.... ...+ .+. .++ . ..+..+......+.+++.
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe--m~L~-~r~-Yqe---------~---qLPalp~~vpp~~rqlV~ 491 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE--MLLD-TRT-YQE---------S---QLPALPSRVPPVARQLVF 491 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccch--heec-hhh-hhh---------h---hCCCCcccCChHHHHHHH
Confidence 1 2489999999999999999999985221 0000 000 000 0 002223344456788999
Q ss_pred hccCCCCCCCCCHHHHHHHH
Q 001253 1064 LCTNISPFDRPTMREVVLML 1083 (1114)
Q Consensus 1064 ~cl~~dP~~RPs~~evl~~L 1083 (1114)
..++.||++|+++.-....+
T Consensus 492 ~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHhcCCccccCCccHHHhHH
Confidence 99999999999987666555
No 436
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1.5e-18 Score=174.95 Aligned_cols=188 Identities=15% Similarity=0.070 Sum_probs=140.5
Q ss_pred cCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhh-HHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEEEEec
Q 001253 812 DERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNV-DNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 812 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
.+...|++|+||+||.+.. .+.+++.+.+.......... ...+++|+++++++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3456899999999997766 57888888776554432211 224789999999995 4789998886 346999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC-CCCCeEECCCCCeEEeeccCceecCCCCCC
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDI-KSNNILLDDKFEAHVGDFGLAKVIDMPQSK 968 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 968 (1114)
++|.+|.+.... ....++.|++++++++|+. ||+|||| ||.||+++.++.++|+|||+|.........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999998765421 1234678999999999999 9999999 799999999999999999999865432210
Q ss_pred ----c--------cccccccccccCccccccC-CCC-cccchHHHHHHHHHHHhCCCCCCC
Q 001253 969 ----S--------MSAIAGSYGYIAPEYAYTM-KVT-EKCDIYSYGVVLLELLTGRAPVQP 1015 (1114)
Q Consensus 969 ----~--------~~~~~g~~~y~aPE~~~~~-~~~-~~~DvwslGvil~el~tg~~p~~~ 1015 (1114)
. ......++.|++|+...-. ..+ .+.+.++-|..+|.++||+.+...
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0112356778888754322 222 567899999999999999988654
No 437
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1.3e-18 Score=179.89 Aligned_cols=142 Identities=19% Similarity=0.177 Sum_probs=112.5
Q ss_pred CceecccCCeEEEEEEeCCCcEEEEEEecccCCCChh-----------------------hHHHHHHHHHHHhcCCCCce
Q 001253 814 RFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNN-----------------------VDNSFRAEILTLGKIRHRNI 870 (1114)
Q Consensus 814 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~h~ni 870 (1114)
.+.||+|+||+||+|+..+|+.||||++......... ....++.|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999888999999999865321100 01224578899999999887
Q ss_pred eeEEeEEEecCceEEEEecCCCCCHHHH-hccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEECCC
Q 001253 871 VKLYGFCYHQGSNLLMYEYMARGSLGEL-LHGASSTLDWQTRFMIALGAAEGLSYLHH-DCKPRIFHRDIKSNNILLDDK 948 (1114)
Q Consensus 871 v~l~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~ 948 (1114)
.....+... ..++||||++|+++... +. ...++..+...++.|++.++.++|+ . ||+||||||+||+++ +
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-C
Confidence 554444332 34899999998855433 43 3457788899999999999999999 7 999999999999999 8
Q ss_pred CCeEEeeccCceecC
Q 001253 949 FEAHVGDFGLAKVID 963 (1114)
Q Consensus 949 ~~~kl~DfG~a~~~~ 963 (1114)
+.++|+|||+|+...
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 899999999998764
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=8e-21 Score=176.94 Aligned_cols=166 Identities=33% Similarity=0.574 Sum_probs=126.8
Q ss_pred cccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcc
Q 001253 458 VTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLV 537 (1114)
Q Consensus 458 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 537 (1114)
+..+...+.|.||+|+++ .+|..++.+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 344556667777777777 66777788888888888888887 77888888888888888888887 7888888888888
Q ss_pred eeeccccccc-ccccccccccccceEEECccccccCCCchhhhhcccCCeeeccCccCCCcccccccccccccccccCCC
Q 001253 538 TFNVSSNFLT-GRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELSGSIPVQIGNLSRLTELQMGGN 616 (1114)
Q Consensus 538 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 616 (1114)
.|||++|.+. ..+|..|+.++.|+.|+|+.|.+. .+|..++++++|+.|.+.+|.+- ++|..++.+++|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 8888888876 356777888888888888888887 77777788878877777777777 67777777777777777777
Q ss_pred cCCCCCChhhcCc
Q 001253 617 SFSGGIPAELGSL 629 (1114)
Q Consensus 617 ~l~~~~p~~~~~l 629 (1114)
+++ .+|++++++
T Consensus 184 rl~-vlppel~~l 195 (264)
T KOG0617|consen 184 RLT-VLPPELANL 195 (264)
T ss_pred eee-ecChhhhhh
Confidence 776 555555443
No 439
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-19 Score=204.03 Aligned_cols=227 Identities=25% Similarity=0.275 Sum_probs=181.8
Q ss_pred eecccCCeEEEEEE----eCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEEEEecC
Q 001253 816 VIGRGACGTVYRAV----LRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~----~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
++|+|+||.|+.++ .+.|.-+|.|+.++......... ....|..++...+ ||.+|++...++.+...+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 37999999999876 23577899999876654433222 4556788888887 999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCcc
Q 001253 891 ARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSM 970 (1114)
Q Consensus 891 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 970 (1114)
.||++...+... ..++..........++-+++++|+. +++|||+|++||+++.+|++++.|||.++..-...
T Consensus 80 rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 80 RGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred ccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 999999988744 3556666666677888899999998 99999999999999999999999999998642111
Q ss_pred ccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcc
Q 001253 971 SAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEK 1050 (1114)
Q Consensus 971 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1114)
..+||..|||||++. ....++|.||||++++||++|..||.. +..+.. +......
T Consensus 152 -~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--------~~~~~I--------------l~~~~~~ 206 (612)
T KOG0603|consen 152 -IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--------DTMKRI--------------LKAELEM 206 (612)
T ss_pred -hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--------HHHHHH--------------hhhccCC
Confidence 118999999999998 567899999999999999999999974 112211 1122445
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1051 TVSHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1051 ~~~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
+.+....+.+++.+++..+|..|--.
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 66677788889999999999999755
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=3.3e-18 Score=193.50 Aligned_cols=220 Identities=24% Similarity=0.393 Sum_probs=168.4
Q ss_pred HhcCCCCceeeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 001253 862 LGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSN 941 (1114)
Q Consensus 862 l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 941 (1114)
++.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+......+++.-...+.++++.||+|+|.. +-.+|+.+++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC--cceeeeeeccc
Confidence 3567999999999999999999999999999999999998778899999999999999999999987 23399999999
Q ss_pred CeEECCCCCeEEeeccCceecCC-CCCCccccccccccccCccccccCC-------CCcccchHHHHHHHHHHHhCCCCC
Q 001253 942 NILLDDKFEAHVGDFGLAKVIDM-PQSKSMSAIAGSYGYIAPEYAYTMK-------VTEKCDIYSYGVVLLELLTGRAPV 1013 (1114)
Q Consensus 942 Nill~~~~~~kl~DfG~a~~~~~-~~~~~~~~~~g~~~y~aPE~~~~~~-------~~~~~DvwslGvil~el~tg~~p~ 1013 (1114)
|++++....+|++|||+...... ..........-..-|.|||.+.... .+.++||||||++++|+++++.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 99999999999999999876532 1111122223445799999887531 466799999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccC
Q 001253 1014 QPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQ 1090 (1114)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1090 (1114)
+......+..+.+.. +.. .......+.+. ...+....+..++.+||..+|++||+++++-..++.+.+..
T Consensus 159 ~~~~~~~~~~eii~~-~~~--~~~~~~rP~i~----~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILR-VKK--GGSNPFRPSIE----LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ccccccCChHHHHHH-HHh--cCCCCcCcchh----hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 875544443222222 221 00011111111 01133336889999999999999999999999999987654
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=4.3e-20 Score=209.32 Aligned_cols=279 Identities=25% Similarity=0.278 Sum_probs=133.5
Q ss_pred ccccccccCC-CCCchhhhcccccceeecccccccCc----ccccccccccCCEEEcccccccccccCccccccceeeee
Q 001253 322 EIDFSENSLI-GEIPVELSKILGLELLYLFENKLTGV----IPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQ 396 (1114)
Q Consensus 322 ~L~ls~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 396 (1114)
.|+|..+.+. ......+..+.+|+.++++++.++.. ++..+...++|++|+++++.+.+ .+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~---------- 70 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL---------- 70 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH----------
Confidence 3566666665 33444555666677777777666432 23334455556666666665542 00000
Q ss_pred ccCCcccCCCCCCCCcCccceEEEeecccccCCCCccccccCc---cceeeeccCCccC----CcCcccccC-CcceEEe
Q 001253 397 LFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICRNTS---LIFLNLETNKLTG----SIPTGVTRC-KSLVQLR 468 (1114)
Q Consensus 397 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~ 468 (1114)
..++..+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+
T Consensus 71 -------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~ 143 (319)
T cd00116 71 -------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLV 143 (319)
T ss_pred -------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEE
Confidence 011122233344444444444444333333333322 5555555554442 112223333 5555555
Q ss_pred eccceeecc----CCchhhccccccEeecccccCCCC----ccccccccccCcEEEecCceeccC----CCccccCCCCc
Q 001253 469 LGGNSFTGS----FPSDLCKLANLSTVELDQNQFSGP----IPTEIGNCNALQRLHLSDNYFTGE----LPREVGNLSNL 536 (1114)
Q Consensus 469 L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 536 (1114)
+++|.+++. ++..+..+.+|++|++++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|
T Consensus 144 L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L 223 (319)
T cd00116 144 LGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSL 223 (319)
T ss_pred cCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCC
Confidence 555555521 223344445566666666665531 222333445666666666665432 22334455566
Q ss_pred ceeecccccccccccccccc-----cccceEEECccccccC----CCchhhhhcccCCeeeccCccCCCc----cccccc
Q 001253 537 VTFNVSSNFLTGRIPLEIFS-----CKMLQRLDLSWNKFVG----ALPREIGSLFQLELLKLSENELSGS----IPVQIG 603 (1114)
Q Consensus 537 ~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~ 603 (1114)
++|++++|.+++.....+.. .+.|+.|++++|.++. .+...+..+++|+++++++|.++.. +...+.
T Consensus 224 ~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~ 303 (319)
T cd00116 224 EVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLL 303 (319)
T ss_pred CEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHh
Confidence 66666666655322222211 2566666666666652 1233344445666666666666633 222333
Q ss_pred cc-ccccccccCCCcC
Q 001253 604 NL-SRLTELQMGGNSF 618 (1114)
Q Consensus 604 ~l-~~L~~L~ls~N~l 618 (1114)
.. +.|++||+.+|++
T Consensus 304 ~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 304 EPGNELESLWVKDDSF 319 (319)
T ss_pred hcCCchhhcccCCCCC
Confidence 33 4566666666543
No 442
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=5e-18 Score=204.96 Aligned_cols=199 Identities=22% Similarity=0.270 Sum_probs=165.3
Q ss_pred HHHHHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC---CCceeeEEeEEEe
Q 001253 803 DLVVATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR---HRNIVKLYGFCYH 879 (1114)
Q Consensus 803 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 879 (1114)
+..+..+.|.+.+.||+|+||+||+|...+|+.||+|+-+....+.-.+..++ +.+++ -+-|..+..++.-
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~------~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQV------MERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHH------HHhhchhhhcchHHHHHHHcc
Confidence 34456678999999999999999999988899999999988877765444433 33443 2345555555566
Q ss_pred cCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC-------CCCCeE
Q 001253 880 QGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLD-------DKFEAH 952 (1114)
Q Consensus 880 ~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-------~~~~~k 952 (1114)
.+..++|+||.+.|+|.+++. ..+.++|.....++.|+++.++.||.. +|||+||||+|.|+. +...++
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred CCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceE
Confidence 778899999999999999998 667899999999999999999999999 999999999999994 234589
Q ss_pred EeeccCceecCC-CCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCC
Q 001253 953 VGDFGLAKVIDM-PQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRA 1011 (1114)
Q Consensus 953 l~DfG~a~~~~~-~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~ 1011 (1114)
|+|||.+..+.. +........++|-.+-.+|+..+.++++..|-|.++-+++-|+.|+.
T Consensus 842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999999976542 23345667789999999999999999999999999999999999973
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=1.1e-19 Score=205.89 Aligned_cols=277 Identities=23% Similarity=0.221 Sum_probs=177.7
Q ss_pred eeeecccccc-cccCccccccccccccccccccCCCC----CchhhhcccccceeecccccccC------cccccccccc
Q 001253 298 YLYIYRNELN-GTIPREIGKLSSALEIDFSENSLIGE----IPVELSKILGLELLYLFENKLTG------VIPVELTTLK 366 (1114)
Q Consensus 298 ~L~L~~n~l~-~~~p~~l~~l~~L~~L~ls~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~------~~~~~~~~l~ 366 (1114)
.|+|..+.++ ...+..+..+..|++|+++++.++.. ++..+...+.++.++++++.+.+ ..+..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5788888887 44556677888899999999998653 45556677789999999998873 2234566677
Q ss_pred cCCEEEcccccccccccCccccccc---eeeeeccCCcccCCCCCCCCcCccceEEEeecccccCCCCcccccc-Cccce
Q 001253 367 NLTKLDLSINSLTGTIPLGFQYLTN---LIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICRN-TSLIF 442 (1114)
Q Consensus 367 ~L~~L~Ls~N~l~~~~~~~~~~l~~---L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~~L~~ 442 (1114)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++.+... ..+...+..+ ++|+.
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~--------------------~~l~~~l~~~~~~L~~ 141 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGL--------------------RLLAKGLKDLPPALEK 141 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHH--------------------HHHHHHHHhCCCCceE
Confidence 8888888888776544444444333 5555555554432100 0112223333 55666
Q ss_pred eeeccCCccCC----cCcccccCCcceEEeeccceeecc----CCchhhccccccEeecccccCCCC----ccccccccc
Q 001253 443 LNLETNKLTGS----IPTGVTRCKSLVQLRLGGNSFTGS----FPSDLCKLANLSTVELDQNQFSGP----IPTEIGNCN 510 (1114)
Q Consensus 443 L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~ 510 (1114)
|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++. ++..+..++
T Consensus 142 L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~ 221 (319)
T cd00116 142 LVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLK 221 (319)
T ss_pred EEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccC
Confidence 66666665532 233445556677777777776632 233444556788888888877643 234456677
Q ss_pred cCcEEEecCceeccCCCcccc-----CCCCcceeecccccccc----cccccccccccceEEECccccccCC----Cchh
Q 001253 511 ALQRLHLSDNYFTGELPREVG-----NLSNLVTFNVSSNFLTG----RIPLEIFSCKMLQRLDLSWNKFVGA----LPRE 577 (1114)
Q Consensus 511 ~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 577 (1114)
+|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..+++|+.+++++|+++.. +...
T Consensus 222 ~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~ 301 (319)
T cd00116 222 SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAES 301 (319)
T ss_pred CCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHH
Confidence 888888888888753232222 23688899999988862 2334455668899999999999855 3334
Q ss_pred hhhc-ccCCeeeccCccC
Q 001253 578 IGSL-FQLELLKLSENEL 594 (1114)
Q Consensus 578 ~~~l-~~L~~L~L~~N~l 594 (1114)
+... +.|++|++.+|.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 302 LLEPGNELESLWVKDDSF 319 (319)
T ss_pred HhhcCCchhhcccCCCCC
Confidence 4444 6788999888864
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.69 E-value=2.1e-16 Score=163.62 Aligned_cols=135 Identities=19% Similarity=0.229 Sum_probs=104.3
Q ss_pred cCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-----CCCceeeEEeEEEecC---c
Q 001253 812 DERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-----RHRNIVKLYGFCYHQG---S 882 (1114)
Q Consensus 812 ~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~ 882 (1114)
.....||+|+||.||. +. ++.. +||++...... ..+.+.+|+.+++.+ +||||++++|+++++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 3456899999999996 43 4444 79988654332 246789999999999 5799999999998864 3
Q ss_pred eE-EEEec--CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEecCCCCCCeEECC----CCCeEEe
Q 001253 883 NL-LMYEY--MARGSLGELLHGASSTLDWQTRFMIALGAAEGL-SYLHHDCKPRIFHRDIKSNNILLDD----KFEAHVG 954 (1114)
Q Consensus 883 ~~-lv~E~--~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlk~~Nill~~----~~~~kl~ 954 (1114)
.+ +|+|| +.+|+|.+++++. .+++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.++|+
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 33 78999 5579999999743 35555 35567778777 999999 9999999999999974 3479999
Q ss_pred eccCc
Q 001253 955 DFGLA 959 (1114)
Q Consensus 955 DfG~a 959 (1114)
||+-+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95544
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=1.5e-16 Score=169.16 Aligned_cols=146 Identities=18% Similarity=0.152 Sum_probs=113.6
Q ss_pred cCCcCCceecccCCeEEEEEE--eCCCcEEEEEEecccCCCC---------------------hhhHHHHHHHHHHHhcC
Q 001253 809 DNFDERFVIGRGACGTVYRAV--LRTGHTVAVKKLASNREGN---------------------NNVDNSFRAEILTLGKI 865 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~~---------------------~~~~~~~~~E~~~l~~l 865 (1114)
..|++.+.||+|+||.||+|+ ..+|+.||+|+++...... ......+..|+..+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358888999999999999998 4589999999997543210 00123467899999999
Q ss_pred CCC--ceeeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEecCCCCCC
Q 001253 866 RHR--NIVKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPR-IFHRDIKSNN 942 (1114)
Q Consensus 866 ~h~--niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~~N 942 (1114)
.+. .+.+++++ ...++||||++++++...... ....+..+...++.|++.+++++|.. + ++||||||+|
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~N 179 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK-DVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYN 179 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc-cCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhh
Confidence 753 34444432 235899999999888776532 23456666788999999999999998 8 9999999999
Q ss_pred eEECCCCCeEEeeccCceecC
Q 001253 943 ILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 943 ill~~~~~~kl~DfG~a~~~~ 963 (1114)
|+++ ++.++++|||.|...+
T Consensus 180 Ili~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEEE-CCCEEEEEChhhhccC
Confidence 9999 8899999999988644
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=5e-16 Score=162.14 Aligned_cols=144 Identities=19% Similarity=0.106 Sum_probs=111.9
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCCh-------------------hhHHHHHHHHHHHhcCC
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNN-------------------NVDNSFRAEILTLGKIR 866 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~ 866 (1114)
.....|.+.+.||+|+||.||+|..++|+.||||++........ .....+..|...+..+.
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 33344888899999999999999988899999999765431100 01123567888888887
Q ss_pred CC--ceeeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeE
Q 001253 867 HR--NIVKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNIL 944 (1114)
Q Consensus 867 h~--niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nil 944 (1114)
|+ .+++.++ ....++||||++|++|.++... .....++.+++.++.++|+. +++||||||+||+
T Consensus 92 ~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nil 157 (198)
T cd05144 92 EEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNIL 157 (198)
T ss_pred HcCCCCCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEE
Confidence 77 3444443 2456899999999999876431 33567889999999999998 9999999999999
Q ss_pred ECCCCCeEEeeccCceecC
Q 001253 945 LDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 945 l~~~~~~kl~DfG~a~~~~ 963 (1114)
+++++.++|+|||++....
T Consensus 158 l~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 158 VDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EcCCCcEEEEECCccccCC
Confidence 9999999999999997544
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.66 E-value=7.4e-16 Score=163.08 Aligned_cols=137 Identities=20% Similarity=0.285 Sum_probs=115.6
Q ss_pred ceecccCCeEEEEEEeCCCcEEEEEEecccCCCChh-----hHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEec
Q 001253 815 FVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNN-----VDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEY 889 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 889 (1114)
+.||+|++|.||+|.+ .|..|++|+.......... ....+.+|+..+..++|++++....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 5788999987654332211 124577899999999999988888888778888999999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
++|++|.+++.... + .+..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986322 2 7889999999999999998 999999999999999 78999999998874
No 448
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.64 E-value=1.1e-15 Score=160.15 Aligned_cols=133 Identities=19% Similarity=0.278 Sum_probs=108.6
Q ss_pred eecccCCeEEEEEEeCCCcEEEEEEecccCCCCh-----hhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecC
Q 001253 816 VIGRGACGTVYRAVLRTGHTVAVKKLASNREGNN-----NVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
.||+|+||+||+|.+. |..|++|+........+ .....+.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 3899999999999964 78999999765432211 11355778999999999887666555666677789999999
Q ss_pred CCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 891 ARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 891 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
+|++|.+++..... .++.+++.++.++|+. +++|||++|+||+++ ++.++++|||.+..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998863211 7889999999999998 999999999999999 88999999999875
No 449
>PLN03150 hypothetical protein; Provisional
Probab=99.64 E-value=5.3e-16 Score=188.37 Aligned_cols=155 Identities=32% Similarity=0.485 Sum_probs=120.0
Q ss_pred cCCCcchHHHHHHhHhhccCCCCCCCCCCCCCCCC--CccceEEEecCCC--ccEEEEEeecCCCcCcccCCCCCCCCcc
Q 001253 29 KGLVNIEGQILLLIKSKLVDNSNYLGNWNPNDSTP--CGWIGVNCTTNDF--GAVVFSLNLTKMNLSGYLSPNIGGLVHL 104 (1114)
Q Consensus 29 ~~~~~~~~~~ll~~k~~~~~~~~~~~~W~~~~~~~--C~w~gv~C~~~~~--~~~v~~l~l~~~~l~g~~~~~l~~l~~L 104 (1114)
.++.++|.+||+++|+++.++.. .+|+++.+.| |.|.||+|+.+.. ..+|+.|+|+++++.|.+|+.++.+++|
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~--~~W~g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L 444 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR--FGWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL 444 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc--CCCCCCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCC
Confidence 35567899999999999865542 4897632211 2799999964321 2368889999999999888888888999
Q ss_pred CEEEecCCcccCCCCcccCCCCCCCEEEccCCCcccccccccccccccceeccccccccCCCCcccccC-cccchhhhcc
Q 001253 105 TALDLSFNQLSRNIPKEIGNCSSLEVLNLNNNRLEAHIPKELGNLSSLTILNIYNNRISGPFPKEIGKL-SALSQLVAYS 183 (1114)
Q Consensus 105 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~l~~ 183 (1114)
+.|+|++|++.|.+|..++.+++|++|+|++|.++|.+|..++++++|++|+|++|+++|.+|..++.+ .++..+++.+
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~ 524 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTD 524 (623)
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecC
Confidence 999999998888888888888889999998888888888888888888888888888888888777653 3444444444
Q ss_pred cc
Q 001253 184 NN 185 (1114)
Q Consensus 184 n~ 185 (1114)
|.
T Consensus 525 N~ 526 (623)
T PLN03150 525 NA 526 (623)
T ss_pred Cc
Confidence 43
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=2.8e-15 Score=180.59 Aligned_cols=140 Identities=19% Similarity=0.227 Sum_probs=113.9
Q ss_pred hcCCcCCceecccCCeEEEEEEeCCCcEEEEEEecccCCC-----ChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCc
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREG-----NNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 882 (1114)
...|...+.||+|+||+||+|.+.. ..+++|+....... .....+.+.+|+++++.++|++++....++.+...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3445677899999999999999864 44555543322111 11123567889999999999999988888877778
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
.++||||+++++|.+++. ....++.++++++.|+|+. +++|||+||+||++ +++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999999885 3567899999999999998 99999999999999 678999999999985
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62 E-value=2.7e-16 Score=185.29 Aligned_cols=210 Identities=23% Similarity=0.293 Sum_probs=145.2
Q ss_pred hcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEE
Q 001253 808 TDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLM 886 (1114)
Q Consensus 808 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 886 (1114)
..+|..++.|..|+||.||..+++ +.+++|.|+ .+... +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l--------ilRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL--------ILRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccch--------hhhc--cccccCCccee---------------
Confidence 367899999999999999999987 567788844 22111 1110 22233344444
Q ss_pred EecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCC
Q 001253 887 YEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQ 966 (1114)
Q Consensus 887 ~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 966 (1114)
|+-...++. .+.++... +.+++|+|+- +|+|||+||+|.+|+.-|++|++|||+++..-+..
T Consensus 136 ------gDc~tllk~-~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ------GDCATLLKN-IGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ------chhhhhccc-CCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 455555552 22333222 6789999998 99999999999999999999999999987432211
Q ss_pred C--------------CccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhc
Q 001253 967 S--------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRN 1032 (1114)
Q Consensus 967 ~--------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1032 (1114)
. -....++||+.|.|||++....|...+|.|++|+|+||.+-|+.||.+....+ .+..++..
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee----lfg~visd 273 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE----LFGQVISD 273 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH----HHhhhhhh
Confidence 1 11234689999999999999999999999999999999999999997543322 22222222
Q ss_pred CCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCH
Q 001253 1033 NSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTM 1076 (1114)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1076 (1114)
..+ +. +.......++.+++.+.++.+|..|--.
T Consensus 274 ~i~--------wp---E~dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 274 DIE--------WP---EEDEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred hcc--------cc---ccCcCCCHHHHHHHHHHHHhChHhhccc
Confidence 110 10 1122223467888999999999999543
No 452
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.60 E-value=2.3e-16 Score=174.44 Aligned_cols=172 Identities=23% Similarity=0.351 Sum_probs=129.5
Q ss_pred ceEEEEecCCCCCHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCc
Q 001253 882 SNLLMYEYMARGSLGELLHG--ASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLA 959 (1114)
Q Consensus 882 ~~~lv~E~~~~gsL~~~l~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a 959 (1114)
+.|+.|++++..+|.+|+.+ .....++.....++.|++.|++| + +.+|||+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 57899999999999999963 34477888999999999999999 5 8999999999999999999999999999
Q ss_pred eecCCCC-----CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 960 KVIDMPQ-----SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT-GRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 960 ~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
....... ...++..+||..||+||.+.+..|+.++||||+|++++|++. =..++.... .
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~-------t-------- 468 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA-------T-------- 468 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH-------h--------
Confidence 8664333 335567789999999999999999999999999999999987 222222110 0
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREV 1079 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1079 (1114)
+..+.+..+. +......+.-+.++.+++.+.|.+||++.++
T Consensus 469 --~~d~r~g~ip---~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 469 --LTDIRDGIIP---PEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred --hhhhhcCCCC---hHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 0111111111 0111111233467889999999999955443
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1e-14 Score=151.09 Aligned_cols=139 Identities=22% Similarity=0.219 Sum_probs=99.3
Q ss_pred CceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHH---------------------HHHHHHHHhcCCCC--ce
Q 001253 814 RFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNS---------------------FRAEILTLGKIRHR--NI 870 (1114)
Q Consensus 814 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~---------------------~~~E~~~l~~l~h~--ni 870 (1114)
.+.||+|+||+||+|...+|+.||||++............. ...|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999987643322111111 13455555555433 24
Q ss_pred eeEEeEEEecCceEEEEecCCCCCHHH-HhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEECCC
Q 001253 871 VKLYGFCYHQGSNLLMYEYMARGSLGE-LLHGASSTLDWQTRFMIALGAAEGLSYLHH-DCKPRIFHRDIKSNNILLDDK 948 (1114)
Q Consensus 871 v~l~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~ 948 (1114)
.+.+++ ...++||||++++.+.. .+.... .. .+...++.+++.++.++|. . +|+|||+||+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-C
Confidence 444433 24689999999954321 111111 11 5677899999999999998 7 999999999999999 8
Q ss_pred CCeEEeeccCceecC
Q 001253 949 FEAHVGDFGLAKVID 963 (1114)
Q Consensus 949 ~~~kl~DfG~a~~~~ 963 (1114)
+.++++|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 999999999997654
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.54 E-value=2.5e-14 Score=142.57 Aligned_cols=135 Identities=21% Similarity=0.192 Sum_probs=114.4
Q ss_pred CCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCC--CceeeEEeEEEecCceEEEEecC
Q 001253 813 ERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRH--RNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 813 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
+.+.||+|.++.||+++..+ ..+++|+...... ...+..|+..++.++| .+++++++++..++..+++|||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 35689999999999999864 7899999865432 3467889999999976 58999998888888899999999
Q ss_pred CCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 891 ARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 891 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
+++.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 76 ~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 98777654 5567778899999999999986445799999999999999989999999999874
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=1.6e-13 Score=146.43 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=107.1
Q ss_pred Cceec-ccCCeEEEEEEeCCCcEEEEEEecccCC----------CChhhHHHHHHHHHHHhcCCCCce--eeEEeEEEec
Q 001253 814 RFVIG-RGACGTVYRAVLRTGHTVAVKKLASNRE----------GNNNVDNSFRAEILTLGKIRHRNI--VKLYGFCYHQ 880 (1114)
Q Consensus 814 ~~~lG-~G~~g~Vy~~~~~~g~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 880 (1114)
...|| .|+.|+||.+... +..+|||.+..... ........+.+|+.++.+++|+++ ++.+++...+
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35788 8999999999876 78899998854211 111234567889999999998774 6777765433
Q ss_pred Cc----eEEEEecCCC-CCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEee
Q 001253 881 GS----NLLMYEYMAR-GSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGD 955 (1114)
Q Consensus 881 ~~----~~lv~E~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 955 (1114)
.. .++||||++| .+|.+++.. ..++.. .+.+++.++.++|+. ||+||||||.|||++.++.++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE--APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc--CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEE
Confidence 22 2599999997 699998863 234443 356889999999999 999999999999999999999999
Q ss_pred ccCcee
Q 001253 956 FGLAKV 961 (1114)
Q Consensus 956 fG~a~~ 961 (1114)
||.++.
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 998875
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.45 E-value=4e-15 Score=164.03 Aligned_cols=178 Identities=34% Similarity=0.542 Sum_probs=115.5
Q ss_pred cceEEEeecccccCCCCccccccCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecc
Q 001253 415 QLWVVDLSDNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELD 494 (1114)
Q Consensus 415 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 494 (1114)
.-...||+.|++. .+|..++.+..|+.+.|.+|.+. .+|..+.++..|.+|+|+.|+++ ..|..++.|+ |+.|-++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3345666666666 56666666666666666666666 56666666666666666666666 5666666655 6666666
Q ss_pred cccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCC
Q 001253 495 QNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGAL 574 (1114)
Q Consensus 495 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 574 (1114)
+|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++. .+|.++.. -.|..||+|.|+++ .+
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS-YL 226 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-ec
Confidence 66666 56666666666667777777666 56666666666666666666666 56666653 34666666666666 66
Q ss_pred chhhhhcccCCeeeccCccCCCcccccc
Q 001253 575 PREIGSLFQLELLKLSENELSGSIPVQI 602 (1114)
Q Consensus 575 p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 602 (1114)
|-.|.+|..|++|-|.+|.|. +.|..+
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred chhhhhhhhheeeeeccCCCC-CChHHH
Confidence 666666666666666666666 445444
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.2e-14 Score=173.55 Aligned_cols=254 Identities=24% Similarity=0.274 Sum_probs=189.6
Q ss_pred cCCcCCceecccCCeEEEEEEeC--CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCC-CCceeeEEeEEEecCceEE
Q 001253 809 DNFDERFVIGRGACGTVYRAVLR--TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIR-HRNIVKLYGFCYHQGSNLL 885 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 885 (1114)
..|...+.||+|+|+.|-.+... ....+|+|.+.... ...........|..+-+.+. |+|++.+++...+.+..++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45777788999999999988864 34556667665443 22223444556777777776 9999999999999999999
Q ss_pred EEecCCCCCHHHHh-ccCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEecCCCCCCeEECCCC-CeEEeeccCceec
Q 001253 886 MYEYMARGSLGELL-HGASSTLDWQTRFMIALGAAEGLSYLH-HDCKPRIFHRDIKSNNILLDDKF-EAHVGDFGLAKVI 962 (1114)
Q Consensus 886 v~E~~~~gsL~~~l-~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfG~a~~~ 962 (1114)
++||..++++.+-+ +......+.........|+..++.|+| .. ++.|||+||+|.+++..+ ..+++|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 99999999999988 543336666777788999999999999 76 999999999999999999 9999999999876
Q ss_pred CC--CCCCccccccc-cccccCccccccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCCC-CHHHHHHHHHhcCCccc
Q 001253 963 DM--PQSKSMSAIAG-SYGYIAPEYAYTMK-VTEKCDIYSYGVVLLELLTGRAPVQPLDQGG-DLVTWVRNFIRNNSLVS 1037 (1114)
Q Consensus 963 ~~--~~~~~~~~~~g-~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~ 1037 (1114)
.. .........+| ++.|+|||...+.. .....|+||.|+++.-+.+|..|+....... ....|....
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~-------- 247 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK-------- 247 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc--------
Confidence 54 22333445678 99999999988854 4568899999999999999999987554322 122222110
Q ss_pred ccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 001253 1038 GMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVV 1080 (1114)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1080 (1114)
................++..+++..+|..|.+.+++.
T Consensus 248 ------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 248 ------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ------cccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 0000111122233566778888889999999888764
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.45 E-value=4.6e-15 Score=163.60 Aligned_cols=181 Identities=30% Similarity=0.484 Sum_probs=143.1
Q ss_pred cCccceeeeccCCccCCcCcccccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEE
Q 001253 437 NTSLIFLNLETNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLH 516 (1114)
Q Consensus 437 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 516 (1114)
++--...||+.|++. ++|..+..+..|+.+.|..|.|. .+|..++++..|++|||+.|+++ ..|..+..|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 344456788888887 67888888888888888888887 78888888888888888888887 6777776665 78888
Q ss_pred ecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCCchhhhhcccCCeeeccCccCCC
Q 001253 517 LSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELSG 596 (1114)
Q Consensus 517 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 596 (1114)
+++|+++ .+|..++.+..|..||.+.|.+. .+|..++.+..|+.|.+..|++. .+|++++.| .|..||+|.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 8888887 67778887788888888888887 77888888888888888888887 667777744 5778888888888
Q ss_pred cccccccccccccccccCCCcCCCCCChhhc
Q 001253 597 SIPVQIGNLSRLTELQMGGNSFSGGIPAELG 627 (1114)
Q Consensus 597 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 627 (1114)
.+|..|.+|..|++|.|.+|+|. ..|..+.
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 78888888888888888888887 5565543
No 459
>PLN03150 hypothetical protein; Provisional
Probab=99.44 E-value=5.4e-14 Score=170.93 Aligned_cols=112 Identities=36% Similarity=0.583 Sum_probs=69.3
Q ss_pred ccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcccccCCCCccccccccceEEec
Q 001253 608 LTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLSGEIPGSFVNLSSLLGCNFS 687 (1114)
Q Consensus 608 L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~ls 687 (1114)
++.|+|++|.++|.+|..++.+++|+ .|+|++|+|+|.+|..++.+++|+.|||++|+|+|.+|+.++++++|+.|+|+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~-~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQ-SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCC-EEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 45556666666666666666666665 56666666666666666666666666666666666666666666666666666
Q ss_pred cCcccCCCCCc--ccccccccccccCCCCCCCCCC
Q 001253 688 YNNLTGPIPSS--QTFQNMSVNSFSGSKGLCGGPL 720 (1114)
Q Consensus 688 ~N~l~g~ip~~--~~~~~~~~~~~~~n~~lc~~p~ 720 (1114)
+|+++|.+|.. ..+.......+.+|..+|+.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 66666666642 1111222345677888888653
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.41 E-value=2.6e-13 Score=158.26 Aligned_cols=204 Identities=36% Similarity=0.498 Sum_probs=143.2
Q ss_pred EEEeecccccCCCCccccccCccceeeeccCCccCCcCcccccCC-cceEEeeccceeeccCCchhhccccccEeecccc
Q 001253 418 VVDLSDNHLTGKIPRHICRNTSLIFLNLETNKLTGSIPTGVTRCK-SLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQN 496 (1114)
Q Consensus 418 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 496 (1114)
.++++.|.+. .....+...+.++.|++.+|.++ .++....... +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4555555553 12223333456677777777776 4555555553 7777777777777 55567777788888888888
Q ss_pred cCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEECccccccCCCch
Q 001253 497 QFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPR 576 (1114)
Q Consensus 497 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 576 (1114)
+++ .+|...+.++.|+.|++++|+++ .+|.....+..|++|++++|.+. .++..+..+.++..|.+++|++. .++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 887 55665557778888888888887 56665555666888888888544 56667777888888888888876 4467
Q ss_pred hhhhcccCCeeeccCccCCCcccccccccccccccccCCCcCCCCCChhhcCcc
Q 001253 577 EIGSLFQLELLKLSENELSGSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLS 630 (1114)
Q Consensus 577 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 630 (1114)
.++.++++++|++++|+++ .++. ++.+.+++.|++++|.++..+|.......
T Consensus 250 ~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~~~ 301 (394)
T COG4886 250 SIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIALLLL 301 (394)
T ss_pred hhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhhhccch
Confidence 7788888888888888888 4444 78888888888888888866665544433
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.39 E-value=2.8e-13 Score=158.02 Aligned_cols=180 Identities=36% Similarity=0.524 Sum_probs=100.9
Q ss_pred ccCcEEEecCceeccCCCccccCCC-CcceeecccccccccccccccccccceEEECccccccCCCchhhhhcccCCeee
Q 001253 510 NALQRLHLSDNYFTGELPREVGNLS-NLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLK 588 (1114)
Q Consensus 510 ~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 588 (1114)
+.++.|++.+|.++ .+|.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|+++ .+|...+.++.|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 44444444444444 3333344342 4555555555554 34444445555555555555554 4444444555555555
Q ss_pred ccCccCCCcccccccccccccccccCCCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcccc
Q 001253 589 LSENELSGSIPVQIGNLSRLTELQMGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLS 668 (1114)
Q Consensus 589 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 668 (1114)
+++|+++ .+|.....+..|++|++++|++. .++..+.++..+. .+.+++|++... |..++.+..|++|++++|+++
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~-~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLS-GLELSNNKLEDL-PESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhccccc-ccccCCceeeec-cchhccccccceecccccccc
Confidence 5555555 44444444444666666666433 4455555566555 455666665543 556667777777777777777
Q ss_pred cCCCCccccccccceEEeccCcccCCCCCc
Q 001253 669 GEIPGSFVNLSSLLGCNFSYNNLTGPIPSS 698 (1114)
Q Consensus 669 g~ip~~~~~l~~l~~l~ls~N~l~g~ip~~ 698 (1114)
.++. +..+.+++.|++++|.++...|..
T Consensus 269 -~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 269 -SISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred -cccc-ccccCccCEEeccCccccccchhh
Confidence 4444 777777777777777777766643
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.38 E-value=1.9e-12 Score=150.44 Aligned_cols=143 Identities=21% Similarity=0.226 Sum_probs=101.2
Q ss_pred ceecccCCeEEEEEEeCCCcEEEEEEecccCCCCh---------------------------h----------hHHHHHH
Q 001253 815 FVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNN---------------------------N----------VDNSFRA 857 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~---------------------------~----------~~~~~~~ 857 (1114)
+.||.|++|.||+|++++|+.||||+.++.....- . .+-+|..
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999999999999999865421100 0 0012455
Q ss_pred HHHHHhcCC-----CCceeeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHH-HHHHHHhCCCC
Q 001253 858 EILTLGKIR-----HRNIVKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAE-GLSYLHHDCKP 931 (1114)
Q Consensus 858 E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~-~L~~LH~~~~~ 931 (1114)
|+..+.+++ ++++.-..-+....+..++||||++|+++.++........ .+..++..++. .+..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~--- 276 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRD--- 276 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhC---
Confidence 665555552 3443322222233456799999999999988765322222 23456666665 46788887
Q ss_pred CeEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 932 RIFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 932 ~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
|++|+|++|.||+++++++++++|||++..+.
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999998764
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=4.7e-12 Score=131.13 Aligned_cols=199 Identities=22% Similarity=0.315 Sum_probs=137.9
Q ss_pred HHhcCCCCceeeEEeEEEecC-----ceEEEEecCCCCCHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 001253 861 TLGKIRHRNIVKLYGFCYHQG-----SNLLMYEYMARGSLGELLHG---ASSTLDWQTRFMIALGAAEGLSYLHHDCKPR 932 (1114)
Q Consensus 861 ~l~~l~h~niv~l~~~~~~~~-----~~~lv~E~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 932 (1114)
-+-.+.|-|+|+++.|+.+.. +..++.|||+.|++..++++ +...+......+++.||..||.|||+. .|.
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 344557999999999986543 46899999999999999973 445788888999999999999999984 889
Q ss_pred eEecCCCCCCeEECCCCCeEEeeccCceecCCC----CCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHh
Q 001253 933 IFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP----QSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLT 1008 (1114)
Q Consensus 933 ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t 1008 (1114)
|+|+++.-+-|++..+|-+|+.--.-.. .... .........+-++|.|||.-.....+.++|||+||+...||..
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999888874221111 0000 0011122346789999998877778889999999999999988
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1009 GRAPVQPLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1009 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
+...-............+...+ ...-++ .=..++.+|++..|..||+|++++.
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i------~~len~--------------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVI------IGLENG--------------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred heeccCCCcceeehhhhhhhhe------eeccCc--------------cccCcCcccccCCCCCCcchhhhhc
Confidence 7643211111000000000000 000000 0124677999999999999998764
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=8.4e-12 Score=141.70 Aligned_cols=250 Identities=23% Similarity=0.208 Sum_probs=182.5
Q ss_pred cCCcCCceecc--cCCeEEEEEEe--C-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCc
Q 001253 809 DNFDERFVIGR--GACGTVYRAVL--R-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 809 ~~~~~~~~lG~--G~~g~Vy~~~~--~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 882 (1114)
..|.....+|. |.+|.||.++. + ++..+|+|+-+........... =.+|+...+.+ .|++.++.+..++.++.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~-k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKR-KLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCcccccc-ccchhhcccccCccccccccCcccccCCc
Confidence 44667778999 99999999997 3 6889999985544432222222 23466666666 48999998889999999
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEecCCCCCCeEECCC-CCeEEeecc
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAE----GLSYLHHDCKPRIFHRDIKSNNILLDDK-FEAHVGDFG 957 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfG 957 (1114)
.|+-+|++. .++..+.+.....++.........+..+ |+.++|+. +++|-|+||.||.+..+ ...+++|||
T Consensus 193 lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 193 LFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred ceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcc
Confidence 999999996 5999988866666788888888888888 99999998 99999999999999999 889999999
Q ss_pred CceecCCCCCCc----cccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcC
Q 001253 958 LAKVIDMPQSKS----MSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNN 1033 (1114)
Q Consensus 958 ~a~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1033 (1114)
+...+....... .....|...|++||...+ -++.++|+|++|.+..+..++..+...... ..|..
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~----~~W~~------ 337 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN----SSWSQ------ 337 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC----CCccc------
Confidence 998776443211 122257889999997654 478899999999999999998766543311 01100
Q ss_pred CcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 001253 1034 SLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVL 1081 (1114)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1081 (1114)
. +..+ .+.+........+...+..+++.+|..|++++.+..
T Consensus 338 --~----r~~~-ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 --L----RQGY-IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --c----cccc-CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 0000 111111122234555888999999999999887643
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.25 E-value=2.8e-11 Score=141.66 Aligned_cols=144 Identities=17% Similarity=0.233 Sum_probs=95.0
Q ss_pred cCCcCCceecccCCeEEEEEEeCC-CcEEEEEEecccCCCC---------------------------h----hhHH---
Q 001253 809 DNFDERFVIGRGACGTVYRAVLRT-GHTVAVKKLASNREGN---------------------------N----NVDN--- 853 (1114)
Q Consensus 809 ~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~---------------------------~----~~~~--- 853 (1114)
.+|+. +.||+|++|.||+|++++ |+.||||+.++..... . +..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45666 789999999999999987 9999999997652110 0 1111
Q ss_pred ---HHHHHHHHHhcCC----CCceeeEEeEEEe-cCceEEEEecCCCCCHHHHhccCCCCCC-----HHHHHHHHHHHHH
Q 001253 854 ---SFRAEILTLGKIR----HRNIVKLYGFCYH-QGSNLLMYEYMARGSLGELLHGASSTLD-----WQTRFMIALGAAE 920 (1114)
Q Consensus 854 ---~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~l~-----~~~~~~i~~~i~~ 920 (1114)
+|.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++-.-.....+ ......++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 2344554444442 3333443344432 5677899999999999875321111222 2222223333
Q ss_pred HHHHHHhCCCCCeEecCCCCCCeEECCCC----CeEEeeccCceecC
Q 001253 921 GLSYLHHDCKPRIFHRDIKSNNILLDDKF----EAHVGDFGLAKVID 963 (1114)
Q Consensus 921 ~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfG~a~~~~ 963 (1114)
+... |++|+|+||.||+++.++ +++++|||++..++
T Consensus 276 ----if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 276 ----VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ----HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 3345 999999999999999988 99999999998753
No 466
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.23 E-value=3.4e-12 Score=130.14 Aligned_cols=129 Identities=26% Similarity=0.334 Sum_probs=80.9
Q ss_pred cccccEeecccccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccccccccccceEEE
Q 001253 485 LANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLD 564 (1114)
Q Consensus 485 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 564 (1114)
...|+++||++|.|+ .+-++..-+|+++.|++|+|.|..+ +.+..+++|+.||||+|.++ .+..+-.++-+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 345666777777766 4555556667777777777777632 22666777777777777776 4444445566777777
Q ss_pred CccccccCCCchhhhhcccCCeeeccCccCCCcc-cccccccccccccccCCCcCC
Q 001253 565 LSWNKFVGALPREIGSLFQLELLKLSENELSGSI-PVQIGNLSRLTELQMGGNSFS 619 (1114)
Q Consensus 565 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~ 619 (1114)
|++|.+... ..++.+.+|..||+++|+|.... ...+++++-|+.+.|.+|++.
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 777776522 34566677777777777766221 234566666666666666665
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.21 E-value=3.9e-12 Score=129.67 Aligned_cols=130 Identities=32% Similarity=0.367 Sum_probs=67.5
Q ss_pred CCCcceeecccccccccccccccccccceEEECccccccCCCchhhhhcccCCeeeccCccCCCcccccccccccccccc
Q 001253 533 LSNLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELSGSIPVQIGNLSRLTELQ 612 (1114)
Q Consensus 533 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 612 (1114)
...|+.+|||+|.|+ .+..+..-.+.++.|++|+|.+... ..+..+++|..||||+|.++ .+..+-.++.+.++|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 344555555555555 4444444455555555555555422 22555555556666666555 3334444455556666
Q ss_pred cCCCcCCCCCChhhcCcchhhHHhhcccccccccC-CccccchhhhHhhhccCccccc
Q 001253 613 MGGNSFSGGIPAELGSLSSLQIALNLSYNNLSGLI-PPELGNLILLEYLLLNNNHLSG 669 (1114)
Q Consensus 613 ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g 669 (1114)
|++|.+.. -..++++-+|. .||+++|++.... -..+|+|+-|+.|.|-+|+|++
T Consensus 359 La~N~iE~--LSGL~KLYSLv-nLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLV-NLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhhHhh--hhhhHhhhhhe-eccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 66665531 11234444444 4555555544322 2456666666666666666663
No 468
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.19 E-value=5.3e-11 Score=121.12 Aligned_cols=130 Identities=20% Similarity=0.120 Sum_probs=95.9
Q ss_pred ceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCcee-eEEeEEEecCceEEEEecCCCC
Q 001253 815 FVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIV-KLYGFCYHQGSNLLMYEYMARG 893 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E~~~~g 893 (1114)
+.++.|.++.||+++.. ++.|++|+....... ...+..|+..++.+.+.+++ +++.+ ..+..++||||++|.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~ 76 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL----LINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGS 76 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCccc----ccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCC
Confidence 56899999999999976 788999997654321 22456788888888655444 44433 334568999999998
Q ss_pred CHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 894 SLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDC--KPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 894 sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
++.+.- ......+.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 77 ~l~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 77 ELLTED---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccccc---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 776430 111345678999999999872 12369999999999999 66899999998874
No 469
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.19 E-value=1.8e-10 Score=131.79 Aligned_cols=166 Identities=19% Similarity=0.272 Sum_probs=127.0
Q ss_pred eCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHH
Q 001253 830 LRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQ 909 (1114)
Q Consensus 830 ~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~ 909 (1114)
..++.+|.|++.+.... .......+-++.++.+|||+|+++++.++.++..|+|+|.+. -|..+++. +...
T Consensus 34 k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~----l~~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE----LGKE 104 (690)
T ss_pred eccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH----hHHH
Confidence 33788999998875544 234556778889999999999999999999999999999886 46666653 3356
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCCCCCCccccccccccccCccccccCC
Q 001253 910 TRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQSKSMSAIAGSYGYIAPEYAYTMK 989 (1114)
Q Consensus 910 ~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~ 989 (1114)
.....+.||+.||.|||..| +++|++|....|+|++.|..||++|..+........ ......---.|..|+.+....
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc
Confidence 67788899999999999765 899999999999999999999999998875431111 111112223466666543222
Q ss_pred CCcccchHHHHHHHHHHHhC
Q 001253 990 VTEKCDIYSYGVVLLELLTG 1009 (1114)
Q Consensus 990 ~~~~~DvwslGvil~el~tg 1009 (1114)
-..|.|.||+++||++.|
T Consensus 182 --~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred --cchhhhhHHHHHHHHhCc
Confidence 346999999999999999
No 470
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.18 E-value=3.1e-10 Score=115.23 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=100.8
Q ss_pred ceecccCCeEEEEEEeCC-------CcEEEEEEecccCC----------CC---------hhhHHHHH----HHHHHHhc
Q 001253 815 FVIGRGACGTVYRAVLRT-------GHTVAVKKLASNRE----------GN---------NNVDNSFR----AEILTLGK 864 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~----------~~---------~~~~~~~~----~E~~~l~~ 864 (1114)
..||.|.-+.||.|...+ +..+|||+.+.... ++ ....+.+. +|++.+++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999998553 47999998864321 01 11122333 78888888
Q ss_pred CCC--CceeeEEeEEEecCceEEEEecCCCCCHH-HHhccCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEecCCCC
Q 001253 865 IRH--RNIVKLYGFCYHQGSNLLMYEYMARGSLG-ELLHGASSTLDWQTRFMIALGAAEGLSYL-HHDCKPRIFHRDIKS 940 (1114)
Q Consensus 865 l~h--~niv~l~~~~~~~~~~~lv~E~~~~gsL~-~~l~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk~ 940 (1114)
+.. -++.+++++ ...++||||+.++.+. ..+++ ..++..+...+..+++.+|..+ |.. ++||+|+++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 853 456666654 4678999999875332 22321 2344556677888999999998 777 999999999
Q ss_pred CCeEECCCCCeEEeeccCceecC
Q 001253 941 NNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 941 ~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
.||+++ ++.+.++|||.|...+
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999998754
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=1.2e-11 Score=133.25 Aligned_cols=184 Identities=24% Similarity=0.258 Sum_probs=119.3
Q ss_pred hccccccEeecccccCCCCcc--ccccccccCcEEEecCceeccC--CCccccCCCCcceeeccccccccccccc-cccc
Q 001253 483 CKLANLSTVELDQNQFSGPIP--TEIGNCNALQRLHLSDNYFTGE--LPREVGNLSNLVTFNVSSNFLTGRIPLE-IFSC 557 (1114)
Q Consensus 483 ~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l 557 (1114)
.++.+|+++.|.+..+. ..+ .....|++++.||||+|-|... +-.-...|++|+.|+|+.|++.-..... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 35667777777777765 333 3566788888888888877632 2233456888888888888886222211 1246
Q ss_pred ccceEEECccccccCC-CchhhhhcccCCeeeccCccCCCcccccccccccccccccCCCcCCCCC-ChhhcCcchhhHH
Q 001253 558 KMLQRLDLSWNKFVGA-LPREIGSLFQLELLKLSENELSGSIPVQIGNLSRLTELQMGGNSFSGGI-PAELGSLSSLQIA 635 (1114)
Q Consensus 558 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~-p~~~~~l~~L~~~ 635 (1114)
+.|+.|.|+.|.|+.. +-.....+|+|+.|+|+.|...+.-......+..|++|||++|++-... -...+.++.|. .
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~-~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLN-Q 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchh-h
Confidence 7888888888888732 2223346688888888888644444555566778888888888886332 13456777777 5
Q ss_pred hhcccccccccC-Ccc-----ccchhhhHhhhccCcccc
Q 001253 636 LNLSYNNLSGLI-PPE-----LGNLILLEYLLLNNNHLS 668 (1114)
Q Consensus 636 L~Ls~N~l~~~~-p~~-----~~~l~~L~~L~Ls~N~l~ 668 (1114)
|+++.+.++..- |.. .....+|++|++++|++.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 777777776542 221 134456667777776664
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.09 E-value=1.4e-11 Score=143.75 Aligned_cols=242 Identities=27% Similarity=0.237 Sum_probs=122.7
Q ss_pred cCCEEEcccccccccccCccccccceeeeeccCCcccCCCCCCCCcCccceEEEeecccccCCCCccccccCccceeeec
Q 001253 367 NLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLTGKIPRHICRNTSLIFLNLE 446 (1114)
Q Consensus 367 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls 446 (1114)
.++.+++..|.|.. +-..+..+++|..|++.+|+|..... .+..+.+|++|+|++|+|+...+ +..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccccc--hhhccchhhheec
Confidence 33444444444442 22223444445555555554442221 14455666666666666654322 3334446666777
Q ss_pred cCCccCCcCcccccCCcceEEeeccceeeccCC-chhhccccccEeecccccCCCCccccccccccCcEEEecCceeccC
Q 001253 447 TNKLTGSIPTGVTRCKSLVQLRLGGNSFTGSFP-SDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGE 525 (1114)
Q Consensus 447 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 525 (1114)
+|.|+. ...+..++.|+.+++++|++...-+ . ...+.+++.+++++|.+.. ...+..+..+..+++..|.++..
T Consensus 149 ~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~ 223 (414)
T KOG0531|consen 149 GNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKL 223 (414)
T ss_pred cCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccceec
Confidence 776663 2334456667777777777663333 1 4556667777777776652 23344444555556666666532
Q ss_pred CCccccCCC--CcceeecccccccccccccccccccceEEECccccccCCCchhhhhcccCCeeeccCccCCCc---ccc
Q 001253 526 LPREVGNLS--NLVTFNVSSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELSGS---IPV 600 (1114)
Q Consensus 526 ~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~ 600 (1114)
-+ +..+. .|+.+++++|++. .++..+..+..+..|++++|++... ..+...+.+..+.++.|.+... ...
T Consensus 224 ~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (414)
T KOG0531|consen 224 EG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQE 298 (414)
T ss_pred cC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhcc
Confidence 21 11122 2666666666665 3334445556666666666666533 1233334455555555554421 111
Q ss_pred c-ccccccccccccCCCcCCCCC
Q 001253 601 Q-IGNLSRLTELQMGGNSFSGGI 622 (1114)
Q Consensus 601 ~-~~~l~~L~~L~ls~N~l~~~~ 622 (1114)
. .....+++.+++.+|++....
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 299 YITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred ccccccccccccccccCcccccc
Confidence 1 334445555555555554433
No 473
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=1.1e-09 Score=106.46 Aligned_cols=133 Identities=25% Similarity=0.317 Sum_probs=103.6
Q ss_pred eecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhH-----HHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEEecC
Q 001253 816 VIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVD-----NSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMYEYM 890 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 890 (1114)
.+++|+-+.+|.+.+. |.++++|.-.+.....++.. ..-.+|+.++.+++--.|....=+..+.+...++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999876 55677776655544333322 23457888888887666665555667788889999999
Q ss_pred CCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 891 ARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 891 ~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
+|..|.+.+... ...++..+-+-+.-||.. ||+|+|+.++||.+..+. +.++|||++..
T Consensus 82 ~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA--------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc--------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888743 245666777778889998 999999999999998775 99999999875
No 474
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.08 E-value=4e-12 Score=133.40 Aligned_cols=183 Identities=25% Similarity=0.299 Sum_probs=94.3
Q ss_pred cCccceEEEeecccccCCCCccc----cccCccceeeeccCCccCCcCc-------------ccccCCcceEEeecccee
Q 001253 412 AYSQLWVVDLSDNHLTGKIPRHI----CRNTSLIFLNLETNKLTGSIPT-------------GVTRCKSLVQLRLGGNSF 474 (1114)
Q Consensus 412 ~l~~L~~L~Ls~N~l~~~~~~~~----~~~~~L~~L~Ls~N~l~~~~p~-------------~~~~l~~L~~L~L~~N~l 474 (1114)
..++|++||||+|.|....++.| .....|++|+|.+|.+...--. -...-+.|+++..++|++
T Consensus 90 ~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrl 169 (382)
T KOG1909|consen 90 GCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRL 169 (382)
T ss_pred cCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccc
Confidence 44578888888888775554433 3446778888888877521111 122334566666666666
Q ss_pred ecc----CCchhhccccccEeecccccCCCC----ccccccccccCcEEEecCceeccC----CCccccCCCCcceeecc
Q 001253 475 TGS----FPSDLCKLANLSTVELDQNQFSGP----IPTEIGNCNALQRLHLSDNYFTGE----LPREVGNLSNLVTFNVS 542 (1114)
Q Consensus 475 ~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls 542 (1114)
... +...|...+.|+.+.+++|.|... +...|..+++|+.|||.+|-|+.. +...+..+++|+.|+++
T Consensus 170 en~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~ 249 (382)
T KOG1909|consen 170 ENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLG 249 (382)
T ss_pred ccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccc
Confidence 421 122344445566666666655411 122344555566666666655421 22233344444555555
Q ss_pred cccccccccccccccccceEEECccccccCCCchhhh-----hcccCCeeeccCccCCC----ccccccccccccccccc
Q 001253 543 SNFLTGRIPLEIFSCKMLQRLDLSWNKFVGALPREIG-----SLFQLELLKLSENELSG----SIPVQIGNLSRLTELQM 613 (1114)
Q Consensus 543 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l 613 (1114)
++.+ ...-...|. ..++|++|.|.+|.++. .+...+...+.|..|+|
T Consensus 250 dcll------------------------~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnL 305 (382)
T KOG1909|consen 250 DCLL------------------------ENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNL 305 (382)
T ss_pred cccc------------------------ccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcC
Confidence 4444 433222221 23455555555555551 12223444566666666
Q ss_pred CCCcC
Q 001253 614 GGNSF 618 (1114)
Q Consensus 614 s~N~l 618 (1114)
++|.+
T Consensus 306 ngN~l 310 (382)
T KOG1909|consen 306 NGNRL 310 (382)
T ss_pred Ccccc
Confidence 66666
No 475
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.07 E-value=4.5e-09 Score=113.09 Aligned_cols=273 Identities=14% Similarity=0.104 Sum_probs=169.7
Q ss_pred cCCceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHH-hcCCCCceeeEEeE------EEecC-ce
Q 001253 812 DERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTL-GKIRHRNIVKLYGF------CYHQG-SN 883 (1114)
Q Consensus 812 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~------~~~~~-~~ 883 (1114)
...+.||+|+.+.+|-.-. -...+.|++.......+ .+ .+..+ +.-.||-+-.-+.+ .-+++ ..
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~---aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQ---AQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCchHH---HH---HHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 3456799999999996532 12346788876554321 11 12222 33356643221111 11222 35
Q ss_pred EEEEecCCCCCHHH-Hhc-----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeecc
Q 001253 884 LLMYEYMARGSLGE-LLH-----GASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFG 957 (1114)
Q Consensus 884 ~lv~E~~~~gsL~~-~l~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 957 (1114)
.+.|..+++..--. +.. +......|+-.+++++.+|.+.+.||.. |.+-+|+.++|+|+++++.|.+.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence 68888887753222 221 1223678999999999999999999999 99999999999999999999999866
Q ss_pred CceecCCCCCCccccccccccccCccccc-----cCCCCcccchHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHh
Q 001253 958 LAKVIDMPQSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSYGVVLLELLTG-RAPVQPLDQGGDLVTWVRNFIR 1031 (1114)
Q Consensus 958 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg-~~p~~~~~~~~~~~~~~~~~~~ 1031 (1114)
.-... .........+|...|.+||.-. +..-+...|.|.+||++++++.| ++||.+.....+...-.+..+.
T Consensus 163 sfqi~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia 240 (637)
T COG4248 163 SFQIN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA 240 (637)
T ss_pred ceeec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh
Confidence 44332 2333444567999999999654 44566789999999999999886 9999876533221111111111
Q ss_pred cCCcccccccc--cccCCCcccHH-HHHHHHHHHhhccCC--CCCCCCCHHHHHHHHHhhhccCCCccccc
Q 001253 1032 NNSLVSGMLDA--RLNLQDEKTVS-HMITVLKIAMLCTNI--SPFDRPTMREVVLMLSESNRRQGHFEFSP 1097 (1114)
Q Consensus 1032 ~~~~~~~~~~~--~~~~~~~~~~~-~~~~l~~li~~cl~~--dP~~RPs~~evl~~L~~i~~~~~~~~~~~ 1097 (1114)
.+.+....... ........+-+ -...+..+..+|+.. .+.-|||++..+..|.++...-.++-...
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a 311 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSA 311 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhcc
Confidence 22222221111 11111111111 123456667788875 36689999999999888876666554444
No 476
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.07 E-value=3e-11 Score=140.92 Aligned_cols=197 Identities=30% Similarity=0.366 Sum_probs=78.5
Q ss_pred cccCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcc
Q 001253 458 VTRCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLV 537 (1114)
Q Consensus 458 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 537 (1114)
+..+++|+.|++.+|+|. .+...+..+.+|++|++++|+|+... .+..++.|+.|++++|.|+. ...+..++.|+
T Consensus 91 l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~--~~~~~~l~~L~ 165 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISD--ISGLESLKSLK 165 (414)
T ss_pred cccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhheeccCcchh--ccCCccchhhh
Confidence 333444444444444444 12212334444444444444444221 12333334444444444441 12233344444
Q ss_pred eeeccccccccccccc-ccccccceEEECccccccCCCchhhhhcccCCeeeccCccCCCcccccccccc--cccccccC
Q 001253 538 TFNVSSNFLTGRIPLE-IFSCKMLQRLDLSWNKFVGALPREIGSLFQLELLKLSENELSGSIPVQIGNLS--RLTELQMG 614 (1114)
Q Consensus 538 ~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~ls 614 (1114)
.+++++|++.. +... ...+..++.+++++|.+... ..+..+..+..+++..|.++-.-+. ..+. .|+.++++
T Consensus 166 ~l~l~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~l--~~~~~~~L~~l~l~ 240 (414)
T KOG0531|consen 166 LLDLSYNRIVD-IENDELSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEGL--NELVMLHLRELYLS 240 (414)
T ss_pred cccCCcchhhh-hhhhhhhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccceeccCc--ccchhHHHHHHhcc
Confidence 44444444442 1111 23344444444444444311 1222223333334444444421111 1111 24555555
Q ss_pred CCcCCCCCChhhcCcchhhHHhhcccccccccCCccccchhhhHhhhccCcccc
Q 001253 615 GNSFSGGIPAELGSLSSLQIALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLS 668 (1114)
Q Consensus 615 ~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 668 (1114)
+|++. .++..+..+..+. .|++++|+++.. ..+.....+..+.++.|.+.
T Consensus 241 ~n~i~-~~~~~~~~~~~l~-~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 241 GNRIS-RSPEGLENLKNLP-VLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred cCccc-ccccccccccccc-ccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 55554 2223333444444 345555554432 12333444555555555544
No 477
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.06 E-value=3e-11 Score=143.48 Aligned_cols=279 Identities=22% Similarity=0.253 Sum_probs=189.0
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceE
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNL 884 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 884 (1114)
...+.+.+.+.+-+|+++.++.+.-. .|...++|+............+....+-.+.-..++|.++...-.+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 34567778888999999999988744 45455555543322211111222223333333345677776655555667889
Q ss_pred EEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCceecCC
Q 001253 885 LMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDM 964 (1114)
Q Consensus 885 lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~~ 964 (1114)
+|++|..++++...++..+ ..+..........+..+.+|||+. .+.|||++|.|.+...++..+++|||.......
T Consensus 881 L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 9999999999999998544 344444444555677889999997 699999999999999999999999983321110
Q ss_pred C-------------------------C-----CCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCCCCC
Q 001253 965 P-------------------------Q-----SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQ 1014 (1114)
Q Consensus 965 ~-------------------------~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~ 1014 (1114)
- . ........||+.|.+||...+......+|.|+.|++++|.++|.+||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 0 011234579999999999999999999999999999999999999997
Q ss_pred CCCCCCCHHHHHHHHHhcCCcccccccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhccCCCcc
Q 001253 1015 PLDQGGDLVTWVRNFIRNNSLVSGMLDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSESNRRQGHFE 1094 (1114)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 1094 (1114)
...... .++... .....+ ...+.+..+.+.+++.+.+..+|.+|-.|.. ....-++..
T Consensus 1037 a~tpq~----~f~ni~----------~~~~~~-p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~-------~~e~k~~~~ 1094 (1205)
T KOG0606|consen 1037 AETPQQ----IFENIL----------NRDIPW-PEGPEEGSYEAQDLINRLLTEEPTQRLGAKG-------AAEVKGHPF 1094 (1205)
T ss_pred Ccchhh----hhhccc----------cCCCCC-CCCccccChhhhhhhhhhhccCchhccCccc-------ccccccCCc
Confidence 544321 111111 111111 2234445566778888999999999987762 123456778
Q ss_pred cccCCCCCcccccccc
Q 001253 1095 FSPMDHDSDQKLENEF 1110 (1114)
Q Consensus 1095 ~~~~~~~~~~~~~~~~ 1110 (1114)
+.+++|+..+...-++
T Consensus 1095 ~~~~~~~~l~~q~~~~ 1110 (1205)
T KOG0606|consen 1095 FQDVDWENLALQKAEF 1110 (1205)
T ss_pred cCCCCccccccccCcc
Confidence 8889999877665443
No 478
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.06 E-value=1.4e-10 Score=143.65 Aligned_cols=299 Identities=24% Similarity=0.235 Sum_probs=180.2
Q ss_pred CCCCCccCEEEecCCcccCCCCcccCCCCCCCEEEccCCC--cccccccccccccccceeccccccccCCCCcccccCcc
Q 001253 98 IGGLVHLTALDLSFNQLSRNIPKEIGNCSSLEVLNLNNNR--LEAHIPKELGNLSSLTILNIYNNRISGPFPKEIGKLSA 175 (1114)
Q Consensus 98 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~--l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 175 (1114)
.......+...+-+|.+. .++... .++.|++|-+.+|. +....++.|..++.|++|||++|.=-+.+|.+++.|-+
T Consensus 519 ~~~~~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred ccchhheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 444567788888888774 344433 34479999999996 55444455888999999999999877799999999999
Q ss_pred cchhhhcccccCCCCCCCccccccccceeccccccccccCCCCCCCCccceeeccccccC--CCCcccccccccccEEEe
Q 001253 176 LSQLVAYSNNISGSLPPTLGNLKRLKSFRAGQNLISGSLPSEIGGCESLQYLGLAQNQLS--GEIPKEIGMLKYLTDVIL 253 (1114)
Q Consensus 176 L~~L~l~~n~i~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~L 253 (1114)
|++|++++..+. .+|..+++|++|.+|++..+.-...+|.....|++|++|.+...... ...-..+..+++|+.+..
T Consensus 597 LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred hhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 999999999998 89999999999999999998766666777778999999999776522 233344455555555555
Q ss_pred cCCcccCccccccccccccchh----hcccccccCCchhhhcCCCccceeeecccccccccCcccccccccccccccccc
Q 001253 254 WGNQLSGVIPKELGNCTSLETL----ALYDNKQVGQLPKELGSIGSLKYLYIYRNELNGTIPREIGKLSSALEIDFSENS 329 (1114)
Q Consensus 254 ~~N~l~~~~p~~l~~l~~L~~L----~Ls~N~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~ 329 (1114)
..... .+-..+..++.|..+ .+.. ......+..++.+.+|+.|.+.++.+............ .++
T Consensus 676 ~~~s~--~~~e~l~~~~~L~~~~~~l~~~~-~~~~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~---~~~----- 744 (889)
T KOG4658|consen 676 TISSV--LLLEDLLGMTRLRSLLQSLSIEG-CSKRTLISSLGSLGNLEELSILDCGISEIVIEWEESLI---VLL----- 744 (889)
T ss_pred ecchh--HhHhhhhhhHHHHHHhHhhhhcc-cccceeecccccccCcceEEEEcCCCchhhcccccccc---hhh-----
Confidence 43332 111223444444432 2222 22334555677778888888877776532222211111 111
Q ss_pred CCCCCchhhhcccccceeecccccccCcccccccccccCCEEEcccccccccccCccccccceeeeeccCCcccCC-CCC
Q 001253 330 LIGEIPVELSKILGLELLYLFENKLTGVIPVELTTLKNLTKLDLSINSLTGTIPLGFQYLTNLIMLQLFDNSLVGG-IPQ 408 (1114)
Q Consensus 330 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~ 408 (1114)
.++++..+...++... ..+.+....++|+.|.+..+.....+......+..+..+.+..+.+.+. .-.
T Consensus 745 ----------~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~ 813 (889)
T KOG4658|consen 745 ----------CFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLC 813 (889)
T ss_pred ----------hHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeee
Confidence 0111222222222111 1112222346677777776665544444445555555544555555443 233
Q ss_pred CCCcCccceEEEe
Q 001253 409 RLGAYSQLWVVDL 421 (1114)
Q Consensus 409 ~~~~l~~L~~L~L 421 (1114)
..+.++++..+.+
T Consensus 814 ~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 814 SLGGLPQLYWLPL 826 (889)
T ss_pred cCCCCceeEeccc
Confidence 3444444444433
No 479
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.04 E-value=1.5e-09 Score=104.56 Aligned_cols=145 Identities=21% Similarity=0.229 Sum_probs=108.6
Q ss_pred CCceecccCCeEEEEEEeCCCcEEEEEEecccCCCCh-----hhHHHHHHHHHHHhcCCCCceeeEEeEEEecCceEEEE
Q 001253 813 ERFVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNN-----NVDNSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLMY 887 (1114)
Q Consensus 813 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 887 (1114)
....|-+|+-+.|+++.+. |+.+.||.-......-+ -..+...+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4567899999999999997 88888886554433222 22345678999998887555555555667777778999
Q ss_pred ecCCC-CCHHHHhccCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC---CeEEeeccCcee
Q 001253 888 EYMAR-GSLGELLHGASST-LDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF---EAHVGDFGLAKV 961 (1114)
Q Consensus 888 E~~~~-gsL~~~l~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfG~a~~ 961 (1114)
||++| .++.+++...... .+.+.....+..|-+.+.-||.. +++|+|+..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 4778877643332 23333367888999999999999 999999999999997655 358999999874
No 480
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=1.6e-10 Score=131.51 Aligned_cols=251 Identities=20% Similarity=0.184 Sum_probs=177.4
Q ss_pred HHhcCCcCCceecccCCeEEEEEEeC--CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcC-CCCceeeEEeEEEecCc
Q 001253 806 VATDNFDERFVIGRGACGTVYRAVLR--TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKI-RHRNIVKLYGFCYHQGS 882 (1114)
Q Consensus 806 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 882 (1114)
....+|..+..||.|.|+.||+...+ ++..|++|...............+ .|+.+...+ .|.+++.....+.....
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl-~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSL-GEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcch-hhhhHhhHhhcccccCCCCCCcccccc
Confidence 34578999999999999999998854 678999998876655443322222 355555555 58888887777777777
Q ss_pred eEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-CCeEEeeccCcee
Q 001253 883 NLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDK-FEAHVGDFGLAKV 961 (1114)
Q Consensus 883 ~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfG~a~~ 961 (1114)
.|+--||+++++...... -...++...++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.+..
T Consensus 341 ~~ip~e~~~~~s~~l~~~-~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSV-TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred ccCchhhhcCcchhhhhH-HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccc
Confidence 889999999998877662 334677888899999999999999988 99999999999999886 7889999999874
Q ss_pred cCCCCCCcccccccccccc--CccccccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHhcCCccccc
Q 001253 962 IDMPQSKSMSAIAGSYGYI--APEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLDQGGDLVTWVRNFIRNNSLVSGM 1039 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~--aPE~~~~~~~~~~~DvwslGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1114)
+.. .. ....+..+++ +|+......+..+.|++|||..+.|.+++..--..... ...++
T Consensus 417 ~~~---~~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~----~~~i~------------ 476 (524)
T KOG0601|consen 417 LAF---SS-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ----SLTIR------------ 476 (524)
T ss_pred cce---ec-ccccccccccccchhhccccccccccccccccccccccccCcccCccccc----ceeee------------
Confidence 221 11 1122333444 55566677788999999999999999998643221111 00000
Q ss_pred ccccccCCCcccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 001253 1040 LDARLNLQDEKTVSHMITVLKIAMLCTNISPFDRPTMREVVLMLSES 1086 (1114)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1086 (1114)
.... ...+ .....+..+.+.+..+++..||.+.++....+..
T Consensus 477 -~~~~---p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 477 -SGDT---PNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred -cccc---cCCC-chHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 0000 0111 1114566778889999999999998876554443
No 481
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.02 E-value=1.6e-11 Score=128.93 Aligned_cols=89 Identities=19% Similarity=0.278 Sum_probs=44.0
Q ss_pred hhccccccEeecccccCCCC----ccccccccccCcEEEecCceeccCCCccc-----cCCCCcceeecccccccc----
Q 001253 482 LCKLANLSTVELDQNQFSGP----IPTEIGNCNALQRLHLSDNYFTGELPREV-----GNLSNLVTFNVSSNFLTG---- 548 (1114)
Q Consensus 482 ~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~---- 548 (1114)
|..++.|+.|||..|.|+.. +...+..+++|+.|+++++.++..-..+| ...++|+.|.|.+|.++.
T Consensus 209 l~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~ 288 (382)
T KOG1909|consen 209 LEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAAL 288 (382)
T ss_pred HHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHH
Confidence 34444555555555554421 22334444555555555555543222222 124566666666666652
Q ss_pred cccccccccccceEEECccccc
Q 001253 549 RIPLEIFSCKMLQRLDLSWNKF 570 (1114)
Q Consensus 549 ~~p~~~~~l~~L~~L~Ls~N~l 570 (1114)
.+...+...+.|..|+|++|++
T Consensus 289 ~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 289 ALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHhcchhhHHhcCCcccc
Confidence 1222333456677777777776
No 482
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.02 E-value=1.9e-09 Score=114.99 Aligned_cols=143 Identities=19% Similarity=0.240 Sum_probs=110.9
Q ss_pred ceecccCCeEEEEEEeCCCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCC--CceeeEEeEEEec---CceEEEEec
Q 001253 815 FVIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRH--RNIVKLYGFCYHQ---GSNLLMYEY 889 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~E~ 889 (1114)
+.|+.|.++.||+++..+|+.+++|+....... .....+..|+++++.+++ ..+.+++.+.... +..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 568999999999999877789999997654431 123457889999999875 3456677776553 256899999
Q ss_pred CCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 001253 890 MARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDC---------------------------------------- 929 (1114)
Q Consensus 890 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------- 929 (1114)
++|.++.+.+.. ..++..+...++.++++++.+||+..
T Consensus 82 i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 82 VDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred eCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 999888876532 35677788888888888888888521
Q ss_pred -------------CCCeEecCCCCCCeEECC--CCCeEEeeccCcee
Q 001253 930 -------------KPRIFHRDIKSNNILLDD--KFEAHVGDFGLAKV 961 (1114)
Q Consensus 930 -------------~~~ivH~Dlk~~Nill~~--~~~~kl~DfG~a~~ 961 (1114)
...++|+|+++.||+++. ++.+.++||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246899999999999998 66789999998874
No 483
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=6.8e-11 Score=127.49 Aligned_cols=138 Identities=25% Similarity=0.240 Sum_probs=78.9
Q ss_pred CCCcCccceEEEeecccccCCCC--ccccccCccceeeeccCCccCCcCcc-cccCCcceEEeeccceeecc-CCchhhc
Q 001253 409 RLGAYSQLWVVDLSDNHLTGKIP--RHICRNTSLIFLNLETNKLTGSIPTG-VTRCKSLVQLRLGGNSFTGS-FPSDLCK 484 (1114)
Q Consensus 409 ~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~-~p~~~~~ 484 (1114)
....+++++.||||+|-|....+ .....+++|+.|+|+.|++.-..... -..++.|+.|.|++|.++-. +...+..
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~ 220 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLT 220 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHh
Confidence 34456666677777776654322 23445677777777777776322221 12456677777777777521 2222345
Q ss_pred cccccEeecccccCCCCccccccccccCcEEEecCceeccCCC--ccccCCCCcceeeccccccc
Q 001253 485 LANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELP--REVGNLSNLVTFNVSSNFLT 547 (1114)
Q Consensus 485 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~ 547 (1114)
+++|+.|+|..|..-..-......+..|+.|||++|++.. .+ ...+.++.|+.|+++.+.+.
T Consensus 221 fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 221 FPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred CCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcc
Confidence 6677777777774332333344455667777777776652 33 34555666666666666665
No 484
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=2.6e-10 Score=113.42 Aligned_cols=102 Identities=25% Similarity=0.229 Sum_probs=29.0
Q ss_pred cccccEeecccccCCCCccccccccccCcEEEecCceeccCCCccc-cCCCCcceeecccccccccc-cccccccccceE
Q 001253 485 LANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREV-GNLSNLVTFNVSSNFLTGRI-PLEIFSCKMLQR 562 (1114)
Q Consensus 485 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~ 562 (1114)
+.+|+.|+|++|+|+.. +.+..++.|++|++++|+|+. +...+ ..+++|+.|+|++|+|...- -..+..+++|+.
T Consensus 41 l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~ 117 (175)
T PF14580_consen 41 LDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRV 117 (175)
T ss_dssp -TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--E
T ss_pred hcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcce
Confidence 34444444444444421 123444455555555555542 22222 23445555555555544210 122334556666
Q ss_pred EECccccccCCC---chhhhhcccCCeeec
Q 001253 563 LDLSWNKFVGAL---PREIGSLFQLELLKL 589 (1114)
Q Consensus 563 L~Ls~N~l~~~~---p~~~~~l~~L~~L~L 589 (1114)
|+|.+|.++..- ...+..+|+|+.||-
T Consensus 118 L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 118 LSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred eeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 666666655321 113445566665543
No 485
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.94 E-value=5e-10 Score=111.41 Aligned_cols=121 Identities=27% Similarity=0.308 Sum_probs=36.8
Q ss_pred ccceeeeccCCccCCcCcccc-cCCcceEEeeccceeeccCCchhhccccccEeecccccCCCCccccc-cccccCcEEE
Q 001253 439 SLIFLNLETNKLTGSIPTGVT-RCKSLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEI-GNCNALQRLH 516 (1114)
Q Consensus 439 ~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ 516 (1114)
++++|+|++|+|+. + +.++ .+.+|+.|+|++|.|+.. +.+..+++|++|++++|+|+. +++.+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEE
Confidence 44555555555552 2 2233 355566666666666522 235556666666666666663 32223 3466666666
Q ss_pred ecCceeccCC-CccccCCCCcceeecccccccccccc----cccccccceEEEC
Q 001253 517 LSDNYFTGEL-PREVGNLSNLVTFNVSSNFLTGRIPL----EIFSCKMLQRLDL 565 (1114)
Q Consensus 517 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L 565 (1114)
|++|+|...- -..+..+++|+.|+|.+|.++.. +. -+..+++|+.||-
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 6666665321 13455667777777777776622 21 2345777777764
No 486
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.91 E-value=9.5e-10 Score=82.06 Aligned_cols=40 Identities=48% Similarity=0.934 Sum_probs=31.0
Q ss_pred cchHHHHHHhHhhcc-CCCCCCCCCCCCC-CCCCccceEEEe
Q 001253 33 NIEGQILLLIKSKLV-DNSNYLGNWNPND-STPCGWIGVNCT 72 (1114)
Q Consensus 33 ~~~~~~ll~~k~~~~-~~~~~~~~W~~~~-~~~C~w~gv~C~ 72 (1114)
++|++||++||+++. +|.+.+++|+.+. .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 579999999999998 5678999999874 789999999995
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.86 E-value=1.3e-09 Score=135.38 Aligned_cols=201 Identities=21% Similarity=0.316 Sum_probs=130.0
Q ss_pred CCccceeeccccccCCCCcccccccccccEEEecCCc--ccCccccccccccccchhhcccccccCCchhhhcCCCccce
Q 001253 221 CESLQYLGLAQNQLSGEIPKEIGMLKYLTDVILWGNQ--LSGVIPKELGNCTSLETLALYDNKQVGQLPKELGSIGSLKY 298 (1114)
Q Consensus 221 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~--l~~~~p~~l~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~ 298 (1114)
....+...+-+|++. .++...... +|++|-+..|. +....+..|..++.|+.|||++|.-.+.+|+.++.|-+|++
T Consensus 522 ~~~~rr~s~~~~~~~-~~~~~~~~~-~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIE-HIAGSSENP-KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchh-hccCCCCCC-ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 356777777777776 444444333 68888888886 55444455778999999999998888889999999999999
Q ss_pred eeecccccccccCccccccccccccccccccCCCCCchhhhcccccceeeccccccc--CcccccccccccCCEEEcccc
Q 001253 299 LYIYRNELNGTIPREIGKLSSALEIDFSENSLIGEIPVELSKILGLELLYLFENKLT--GVIPVELTTLKNLTKLDLSIN 376 (1114)
Q Consensus 299 L~L~~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N 376 (1114)
|+|++..+. .+|..++++..|.+|++..+.....+|.....+.+|++|.+...... ...-..+.++.+|+.+.....
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 999999988 78889999999999999888766666666777888888888766522 222233445555555555333
Q ss_pred cccccccCcccccccee----eeeccCCcccCCCCCCCCcCccceEEEeeccccc
Q 001253 377 SLTGTIPLGFQYLTNLI----MLQLFDNSLVGGIPQRLGAYSQLWVVDLSDNHLT 427 (1114)
Q Consensus 377 ~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 427 (1114)
.. .+-..+..+..|. .+.+..+.. ...+..+..+.+|+.|.+.++.+.
T Consensus 679 s~--~~~e~l~~~~~L~~~~~~l~~~~~~~-~~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 679 SV--LLLEDLLGMTRLRSLLQSLSIEGCSK-RTLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred hh--HhHhhhhhhHHHHHHhHhhhhccccc-ceeecccccccCcceEEEEcCCCc
Confidence 22 1111223333332 222222111 123344455566666666665554
No 488
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.84 E-value=2.7e-08 Score=100.92 Aligned_cols=129 Identities=26% Similarity=0.326 Sum_probs=84.1
Q ss_pred EEEEEEeCCCcEEEEEEecccCCC-----------------------ChhhHHHHHHHHHHHhcCCCC--ceeeEEeEEE
Q 001253 824 TVYRAVLRTGHTVAVKKLASNREG-----------------------NNNVDNSFRAEILTLGKIRHR--NIVKLYGFCY 878 (1114)
Q Consensus 824 ~Vy~~~~~~g~~vavK~~~~~~~~-----------------------~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 878 (1114)
.||.|...+|..+|||+.+..... ........++|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489999988999999988643211 011223467899999999765 466666442
Q ss_pred ecCceEEEEecCC--CCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCCCeEecCCCCCCeEECCCCCeEEee
Q 001253 879 HQGSNLLMYEYMA--RGSLGELLHGASSTLDWQTRFMIALGAAEGLSY-LHHDCKPRIFHRDIKSNNILLDDKFEAHVGD 955 (1114)
Q Consensus 879 ~~~~~~lv~E~~~--~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 955 (1114)
..++||||++ |..+..+.... ++......++.+++..+.. +|.. |++|+|+.+.||+++++ .+.++|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE--
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEEe
Confidence 4579999999 65554444311 1133455667777775555 4677 99999999999999988 999999
Q ss_pred ccCceecC
Q 001253 956 FGLAKVID 963 (1114)
Q Consensus 956 fG~a~~~~ 963 (1114)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99998643
No 489
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.75 E-value=2.8e-07 Score=102.42 Aligned_cols=166 Identities=20% Similarity=0.300 Sum_probs=127.1
Q ss_pred CeEEEEEEeC-CCcEEEEEEecccCCCChhhHHHHHHHHHHHhcCCCCceeeEEeEEEe----cCceEEEEecCCCC-CH
Q 001253 822 CGTVYRAVLR-TGHTVAVKKLASNREGNNNVDNSFRAEILTLGKIRHRNIVKLYGFCYH----QGSNLLMYEYMARG-SL 895 (1114)
Q Consensus 822 ~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~~~~g-sL 895 (1114)
..+.|++... ||..|+.|+++..+...... ...-+++++++.|+|+|++.+++.. +...++||+|.++. +|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk---~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNK---DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCccc---chHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 4578999865 89999999996555443211 2345678999999999999998863 44678999999864 77
Q ss_pred HHHhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCCeEEeeccCcee
Q 001253 896 GELLHGA--------------SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKV 961 (1114)
Q Consensus 896 ~~~l~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG~a~~ 961 (1114)
.++-... +...++...+.++.|++.||.++|+. |+..+-+.+++|+++.+.+++|+..|....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 7764311 22467888999999999999999999 999999999999999999999998887766
Q ss_pred cCCCCCCccccccccccccCccccccCCCCcccchHHHHHHHHHHHhCCC
Q 001253 962 IDMPQSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRA 1011 (1114)
Q Consensus 962 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~ 1011 (1114)
...+.. |-+. -..+-|.=.+|.++..+.||..
T Consensus 443 l~~d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 443 LQEDPT---------------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred ecCCCC---------------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 543221 1111 1235688999999999999964
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.71 E-value=9.9e-09 Score=83.90 Aligned_cols=59 Identities=32% Similarity=0.468 Sum_probs=29.6
Q ss_pred cccEeecccccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeeccccc
Q 001253 487 NLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNF 545 (1114)
Q Consensus 487 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 545 (1114)
+|++|++++|+|+...+..|.++++|++|++++|+|+...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34445555555544444445555555555555555554444455555555555555554
No 491
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.70 E-value=7.9e-08 Score=99.33 Aligned_cols=140 Identities=24% Similarity=0.165 Sum_probs=98.3
Q ss_pred CcCCceecccCCeEEEEEEeCCCcEEEEEEecccCC-------------------CChhhHHHHHHHHHHHhcCCCC--c
Q 001253 811 FDERFVIGRGACGTVYRAVLRTGHTVAVKKLASNRE-------------------GNNNVDNSFRAEILTLGKIRHR--N 869 (1114)
Q Consensus 811 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-------------------~~~~~~~~~~~E~~~l~~l~h~--n 869 (1114)
..+..+||.|.-+.||.|....|.++|||.=+.... +-.......++|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 445678999999999999999999999995322111 1112233456788899888654 6
Q ss_pred eeeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 001253 870 IVKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKF 949 (1114)
Q Consensus 870 iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 949 (1114)
|.+.+++ +...+||||++|--|...- ++......++..|++-+.-+-.. |+||+|+.+-||++++||
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecCC
Confidence 6666654 3557999999996555432 12233333444444444444455 999999999999999999
Q ss_pred CeEEeeccCceecC
Q 001253 950 EAHVGDFGLAKVID 963 (1114)
Q Consensus 950 ~~kl~DfG~a~~~~ 963 (1114)
.+.++||-.+...+
T Consensus 240 ~~~vIDwPQ~v~~~ 253 (304)
T COG0478 240 DIVVIDWPQAVPIS 253 (304)
T ss_pred CEEEEeCcccccCC
Confidence 99999999887543
No 492
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.67 E-value=2.7e-07 Score=99.63 Aligned_cols=142 Identities=18% Similarity=0.120 Sum_probs=99.8
Q ss_pred eecccCCeEEEEEEeCCCcEEEEEEecccCCCC--------hhhHHHHHHHHHHHhcCCCC--ceeeEEeEEEe-----c
Q 001253 816 VIGRGACGTVYRAVLRTGHTVAVKKLASNREGN--------NNVDNSFRAEILTLGKIRHR--NIVKLYGFCYH-----Q 880 (1114)
Q Consensus 816 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~-----~ 880 (1114)
.+-+.....|++..+. |+.|.||......... ......+.+|...+.++... .+++++++.+. .
T Consensus 29 ~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 4444444557777664 7899999774332110 01112367888888777432 33444555543 2
Q ss_pred CceEEEEecCCCC-CHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-------CCCe
Q 001253 881 GSNLLMYEYMARG-SLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDD-------KFEA 951 (1114)
Q Consensus 881 ~~~~lv~E~~~~g-sL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-------~~~~ 951 (1114)
...++|||++++. +|.+++... ....+......++.+++..+.-||.. ||+|+|+++.|||++. ++.+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceE
Confidence 3468999999986 899988532 23456677788999999999999999 9999999999999975 4689
Q ss_pred EEeeccCcee
Q 001253 952 HVGDFGLAKV 961 (1114)
Q Consensus 952 kl~DfG~a~~ 961 (1114)
.++||+.+..
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998863
No 493
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.67 E-value=4.1e-09 Score=95.93 Aligned_cols=136 Identities=25% Similarity=0.333 Sum_probs=101.3
Q ss_pred cceEEECccccccCCCchhhhhc---ccCCeeeccCccCCCcccccc-cccccccccccCCCcCCCCCChhhcCcchhhH
Q 001253 559 MLQRLDLSWNKFVGALPREIGSL---FQLELLKLSENELSGSIPVQI-GNLSRLTELQMGGNSFSGGIPAELGSLSSLQI 634 (1114)
Q Consensus 559 ~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 634 (1114)
.+..+||+++.+- .+++....+ ..|...+|++|.+. ..|..| ..++.++.|+|++|.|+ .+|.++..++.|+
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr- 103 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALR- 103 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhh-
Confidence 4556677777664 455554443 45666688888887 444444 45568889999999998 8888899999998
Q ss_pred HhhcccccccccCCccccchhhhHhhhccCcccccCCCCccccccccceEEeccCcccCCCCCccc
Q 001253 635 ALNLSYNNLSGLIPPELGNLILLEYLLLNNNHLSGEIPGSFVNLSSLLGCNFSYNNLTGPIPSSQT 700 (1114)
Q Consensus 635 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~ls~N~l~g~ip~~~~ 700 (1114)
.||++.|.|..+ |..+..|.+|-+||..+|.+. +||..+..-+.....++.+++|.+..|.+.|
T Consensus 104 ~lNl~~N~l~~~-p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klq 167 (177)
T KOG4579|consen 104 SLNLRFNPLNAE-PRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQ 167 (177)
T ss_pred hcccccCccccc-hHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccccc
Confidence 799999999865 778888999999999999988 6666544444555567788999998887644
No 494
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.64 E-value=2.3e-08 Score=81.73 Aligned_cols=60 Identities=32% Similarity=0.467 Sum_probs=37.4
Q ss_pred cceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEEecCcee
Q 001253 463 SLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYF 522 (1114)
Q Consensus 463 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 522 (1114)
+|++|++++|+++...+..|..+++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455666666666655555666666666666666666655556666666666666666654
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.61 E-value=1.3e-09 Score=124.07 Aligned_cols=125 Identities=32% Similarity=0.379 Sum_probs=59.4
Q ss_pred ccEeecccccCCCCccccccccccCcEEEecCceeccCCCccccCCCCcceeecccccccccccc-cccccccceEEECc
Q 001253 488 LSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPREVGNLSNLVTFNVSSNFLTGRIPL-EIFSCKMLQRLDLS 566 (1114)
Q Consensus 488 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls 566 (1114)
|.+.+.+.|.+. ..-..+.-++.|+.|||++|+++... .+..+++|++|||++|++. .+|. ....+. |+.|.++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 444444444444 33334444445555555555554221 3444455555555555554 2332 111222 5555555
Q ss_pred cccccCCCchhhhhcccCCeeeccCccCCCcccc-cccccccccccccCCCcCC
Q 001253 567 WNKFVGALPREIGSLFQLELLKLSENELSGSIPV-QIGNLSRLTELQMGGNSFS 619 (1114)
Q Consensus 567 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~ 619 (1114)
+|.++.. ..+.+|.+|+.||+++|-|++.-.- .++.|..|+.|+|.||++-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 5555422 2345555555566666655543211 1334555666666666654
No 496
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.53 E-value=2.3e-07 Score=108.18 Aligned_cols=144 Identities=22% Similarity=0.262 Sum_probs=97.3
Q ss_pred ceecccCCeEEEEEEeCCCcEEEEEEecccCCCC---------------------------hh----------hHHHHHH
Q 001253 815 FVIGRGACGTVYRAVLRTGHTVAVKKLASNREGN---------------------------NN----------VDNSFRA 857 (1114)
Q Consensus 815 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---------------------------~~----------~~~~~~~ 857 (1114)
..|+.++-|.||+|++++|+.||||+.++..... .. .+-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 5799999999999999999999999987653210 00 1113455
Q ss_pred HHHHHhcCC-----CCceeeEEeEEEecCceEEEEecCCCCCHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 001253 858 EILTLGKIR-----HRNIVKLYGFCYHQGSNLLMYEYMARGSLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPR 932 (1114)
Q Consensus 858 E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 932 (1114)
|+..+.+++ .|.+.-..=|.+..+...++|||++|-.+.+...-.....+.........++. +..+-.. |
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~d---g 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRD---G 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhc---C
Confidence 555555553 34443333334446778999999999988888532234455333332222221 2222233 9
Q ss_pred eEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 933 IFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 933 ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
++|+|..|.||+++.+|++.+.|||+...++
T Consensus 286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred ccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 9999999999999999999999999998664
No 497
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.53 E-value=2.6e-09 Score=121.68 Aligned_cols=126 Identities=27% Similarity=0.294 Sum_probs=68.4
Q ss_pred cceEEeeccceeeccCCchhhccccccEeecccccCCCCccccccccccCcEEEecCceeccCCCc-cccCCCCcceeec
Q 001253 463 SLVQLRLGGNSFTGSFPSDLCKLANLSTVELDQNQFSGPIPTEIGNCNALQRLHLSDNYFTGELPR-EVGNLSNLVTFNV 541 (1114)
Q Consensus 463 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L 541 (1114)
.|...+.+.|++. ....++.-++.|+.|+|++|+++.. +.+..|++|++|||++|++. .+|. ...++ +|+.|++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeee
Confidence 4555555566555 4455555556666666666666532 25555666666666666665 2332 12222 2666666
Q ss_pred ccccccccccccccccccceEEECccccccCCC-chhhhhcccCCeeeccCccCC
Q 001253 542 SSNFLTGRIPLEIFSCKMLQRLDLSWNKFVGAL-PREIGSLFQLELLKLSENELS 595 (1114)
Q Consensus 542 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~ 595 (1114)
++|.++ . -..+.++++|+.|||++|-|.+.- -.-++.|..|+.|+|.+|.+-
T Consensus 240 rnN~l~-t-L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALT-T-LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHH-h-hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 666665 1 123445666666666666665431 122345566666666666554
No 498
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.46 E-value=1.2e-06 Score=89.86 Aligned_cols=155 Identities=22% Similarity=0.186 Sum_probs=99.6
Q ss_pred CHHHHHHHhcCCcCCc---eecccCCeEEEEEEeCCCcEEEEEEecccCCCChh---------------------hHHHH
Q 001253 800 TFKDLVVATDNFDERF---VIGRGACGTVYRAVLRTGHTVAVKKLASNREGNNN---------------------VDNSF 855 (1114)
Q Consensus 800 ~~~~~~~~~~~~~~~~---~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~---------------------~~~~~ 855 (1114)
+.+.+........+.. .|..|.-+.||+|...++..+|||+++........ ...-.
T Consensus 36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~ 115 (268)
T COG1718 36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA 115 (268)
T ss_pred HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence 3344433334444333 56677788999999888999999999755332111 00112
Q ss_pred HHHHHHHhcCC--CCceeeEEeEEEecCceEEEEecCCCC-CHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 001253 856 RAEILTLGKIR--HRNIVKLYGFCYHQGSNLLMYEYMARG-SLGELLHGASSTLDWQTRFMIALGAAEGLSYLHHDCKPR 932 (1114)
Q Consensus 856 ~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 932 (1114)
++|..-|+++. +-.+.+.+++. .-.+||||+... .-.-.|++. .++..+...+..++++.+.-|-..+ +
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv--~~e~~e~~~~~~~~v~~~~~l~~~a--~ 187 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDV--PLELEEAEGLYEDVVEYMRRLYKEA--G 187 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcccC--CcCchhHHHHHHHHHHHHHHHHHhc--C
Confidence 34555565553 33444554443 347999999763 111122211 2333356677778888888877632 9
Q ss_pred eEecCCCCCCeEECCCCCeEEeeccCceecC
Q 001253 933 IFHRDIKSNNILLDDKFEAHVGDFGLAKVID 963 (1114)
Q Consensus 933 ivH~Dlk~~Nill~~~~~~kl~DfG~a~~~~ 963 (1114)
+||+|++.-|||+. ++.+.++|||.|....
T Consensus 188 LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 188 LVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred cccccchhhheEEE-CCeEEEEECccccccC
Confidence 99999999999999 8899999999998755
No 499
>PRK09902 hypothetical protein; Provisional
Probab=98.41 E-value=4.8e-06 Score=84.74 Aligned_cols=140 Identities=16% Similarity=0.084 Sum_probs=103.4
Q ss_pred ecccCCeEEEEEEeCCCcEEEEEEecccCCCC---hhhHHHHHHHHHHHhcCCC--CceeeEEeEEE-ec----CceEEE
Q 001253 817 IGRGACGTVYRAVLRTGHTVAVKKLASNREGN---NNVDNSFRAEILTLGKIRH--RNIVKLYGFCY-HQ----GSNLLM 886 (1114)
Q Consensus 817 lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~-~~----~~~~lv 886 (1114)
-|+|+-+.|+..... |..+-+|+-....... +.....|.+|...+.++.. -.+.++. ++. .. -..++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 367888999997766 5578899865221111 2346678999999988853 2255554 332 11 135799
Q ss_pred EecCCC-CCHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCC--eEEeeccCcee
Q 001253 887 YEYMAR-GSLGELLHGA-SSTLDWQTRFMIALGAAEGLSYLHHDCKPRIFHRDIKSNNILLDDKFE--AHVGDFGLAKV 961 (1114)
Q Consensus 887 ~E~~~~-gsL~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~DfG~a~~ 961 (1114)
+|-++| -+|.+++... -...+...+..+..+++..+.-||.. |+.|+|+.++||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998864 3898888643 23567788889999999999999999 9999999999999987677 99999997764
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.39 E-value=3.8e-06 Score=87.84 Aligned_cols=105 Identities=21% Similarity=0.247 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhcCCC--CceeeEEeEEEecC----ceEEEEecCCCC-CHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Q 001253 853 NSFRAEILTLGKIRH--RNIVKLYGFCYHQG----SNLLMYEYMARG-SLGELLHGASSTLDWQTRFMIALGAAEGLSYL 925 (1114)
Q Consensus 853 ~~~~~E~~~l~~l~h--~niv~l~~~~~~~~----~~~lv~E~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~i~~~L~~L 925 (1114)
....+|...+..+.. -.+.+++++.+... ..++|+|++++. +|.+++..... .+......++.++++.++-|
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL 134 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence 346678877777743 23556666665532 348999999985 79999874332 66677889999999999999
Q ss_pred HhCCCCCeEecCCCCCCeEECCCC---CeEEeeccCcee
Q 001253 926 HHDCKPRIFHRDIKSNNILLDDKF---EAHVGDFGLAKV 961 (1114)
Q Consensus 926 H~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfG~a~~ 961 (1114)
|.. ||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 135 H~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 135 HDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999 999999999999999887 899999998775
Done!