BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001257
(1113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23144|PPI1_ARATH Proton pump-interactor 1 OS=Arabidopsis thaliana GN=PPI1 PE=1 SV=2
Length = 612
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 249/538 (46%), Gaps = 81/538 (15%)
Query: 571 VVVNGGIKFTSEEQNDKTCPEVKENRGIQLTGGEDGDRTFQDVEGIERSDRCETQTSTPE 630
VV +GG + K PE +N + G+D F V + ++
Sbjct: 5 VVNSGGFEVAPAPFEGK--PE--KNGKLDQGKGDDAPINFGSVGELPKNAEENNNKVVNS 60
Query: 631 GSTVDASESRNIGVEVVKQPFYFLVKVPRYDDENLREQIKAAQSKVDEKTRSRDAIRDDI 690
+ +A+E + ++ ++LVK Y D ++ ++ A ++++ ++R + D +
Sbjct: 61 DAPKNAAEEWPVAKQIHS---FYLVKYRSYADPKIKAKLDLADKELEKLNKARTGVLDKL 117
Query: 691 QTIRASYKEYAEKLEAAISDERSARESLKSKRQEIDSVQSRINMMKN---------AI-- 739
+ RA E + L+ S+ + KR+E++ +Q + +++ AI
Sbjct: 118 RAKRAERSELFDLLDPLKSERKGFNTMFDEKRKEMEPLQQALGKLRSNDGGSARGPAICS 177
Query: 740 SVDDIDGSIRNMEHRIAHETLPLKEEKQIIREIKQLKQRREQISSSIGEHDEVQLAFDQK 799
S ++++ I + ++RI HE++PL EEKQI++EI+ L+ R+++ ++ +++ + QK
Sbjct: 178 SEEELNSMIYSYQYRIQHESIPLTEEKQILKEIRLLEGTRDKVIANAAMRAKIKESMGQK 237
Query: 800 DQIEEKMKFLRKEADSLRENVIKAEAATQAVKKLHREESEKLKR-------LLGQFKAAD 852
D I+ ++K + D +++ QA+ E SEKLK L + K
Sbjct: 238 DDIQGQVKLMGAGLDGVKKE-------RQAISARINELSEKLKATKDEITVLENELKTVS 290
Query: 853 EIRQEAYKHWQSLKKQAYDKNQHFWKYKDDTKQANDLASKGDREALQHLCVNQVERVLEL 912
E R +AY + L++Q + N +++ + +A DLA++ + L+ L +VE+ + L
Sbjct: 291 EKRDKAYSNIHDLRRQRDETNSEYYQNRTVLNKARDLAAQKNISELEALANAEVEKFISL 350
Query: 913 WNNNDEFRKEYVNSNIRSTLRRLKTLDGRSLGPDEEAPLIRPFLNDRVAKNISLTQISAL 972
W + FR++Y ++S R + DGR PDE+ PLI P + ++ +
Sbjct: 351 WCSKKNFREDYEKRILQSLDSRQLSRDGRMRNPDEK-PLIAP--------EAAPSKATPS 401
Query: 973 EREKTEQVVPIKSEKVDDKPFPEVREQGDQIAKFKKPEKPSRAENVSTTVSGRDDEIEEA 1032
E E VVP K KP P+ E+P A TV+ ++ ++A
Sbjct: 402 ETE----VVP----KAKAKPQPK--------------EEPVSAPKPDATVAQNTEKAKDA 439
Query: 1033 ----------KEEVPKLTKEEEEMARKAEEKRKEEATAKLREQRRLEEKAKAQEALER 1080
+EV L K ++ EEK + ATAK E R+ EE AKA++A+ER
Sbjct: 440 VKVKNVADDDDDEVYGLGKPQK------EEKPVDAATAK--EMRKQEEIAKAKQAMER 489
>sp|B3H4K7|PPI2_ARATH Proton pump-interactor 2 OS=Arabidopsis thaliana GN=PPI2 PE=2 SV=1
Length = 589
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 101/497 (20%), Positives = 209/497 (42%), Gaps = 74/497 (14%)
Query: 622 CETQTSTPEGSTVDASESRNIGVE----VVKQPF-YFLVKVPRYDDENLREQIKAAQSKV 676
C+ T T E TV + +S G ++PF ++ VK P YDD ++ +I A ++
Sbjct: 34 CDVSTVTTEDGTVFSGDSSPGGATEEDFPEEKPFSFYFVKQPAYDDPEIKAKIDEAGHEI 93
Query: 677 DEKTRSRDAIRDDIQTIRASYKEYAEKLEAAISDERSARESLKSKRQEIDSVQSRINMMK 736
+ + R + + ++ +A ++++ +S R ++ K+ E D++ + ++
Sbjct: 94 NRYNKDRIVVSNAQESEKAEILSLFGQMKSLVSKSEGYRVVIEEKKMEFDALHESLRNLR 153
Query: 737 NA------ISVDDIDGSIRNMEHRIAHETLPLKEEKQIIREIKQLKQRREQISSSIGEHD 790
+ S +++D I ++I H ++ +EE +++E ++ D
Sbjct: 154 CSTSDQLCFSKEELDHLIYIAHYQIEHGSIGFEEEDWVLKETEKA--------------D 199
Query: 791 EVQLAFDQKDQIEEKMKFLRKEADSLRENVIKAEAATQAVKKLHREESEKLKRLLGQFKA 850
+ L+ D + E + ++ A L E + +A T + L S+K+ + +
Sbjct: 200 GIVLSEDSLAEKEASINRVKSMAVELNEVKKELDAITWKINHL----SDKVGKSQNNLRV 255
Query: 851 AD-------EIRQEAYKHWQSLKKQAYDKNQHFWKYKDDTKQANDLASKGDREALQHLCV 903
D E R +Y+ + L+ Q F++ ++A +LA+ G+ L+
Sbjct: 256 LDVKKAHILEERDRSYERIKMLRIQRDKGKAAFYQSLPVMRKARELAASGNVRDLEVFAS 315
Query: 904 NQVERVLELWNNNDEFRKEYVNSNIRSTLRRLKTLDGRSLGPDEEAPLIRPFLNDRVAKN 963
++ +R + WN++ FR +YV S R DGR P+ + K
Sbjct: 316 SEADRFMTQWNDDKAFRDDYVKRISPSLCERQLNQDGRIKDPEVQVVW---------EKK 366
Query: 964 ISLT---QISALEREKTEQVVPIKSEKVDDKPFPEVREQGDQIAKFKKPEKPSRAENVST 1020
+ + ++ RE + + DK E R+ +A + +
Sbjct: 367 VPVKGGEKVHETNREDSSSNSSQYGSVITDKRKKETRK---------------KAMDFNR 411
Query: 1021 TVSGRDDEIEEAKEEVPKLTKEEEEMARKAEEKRKEEATAKLREQRRLEEKAKAQEALER 1080
+ + D +T E + K +++ +E L+E+ R E+ KA+ A+ER
Sbjct: 412 SSAEESD-----------VTDLEFSVYEKPKKEEEEVDEETLKEREREEQLEKARLAMER 460
Query: 1081 KKRIAEKAQTRAALRAQ 1097
K+++ EKA +AA+RAQ
Sbjct: 461 KRKLQEKAAAKAAIRAQ 477
>sp|P0DKC0|PPI3B_ARATH Proton pump-interactor 3B OS=Arabidopsis thaliana GN=PPI3B PE=3
SV=1
Length = 576
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 133/311 (42%), Gaps = 52/311 (16%)
Query: 652 YFLVKVPRYDDENLREQIKAAQSKVDEKTRSRDAIRDDIQTIRASYKEYAE------KLE 705
+++VK P YD+ ++ +I A ++ R I + A E AE ++E
Sbjct: 69 FYIVKQPVYDNPEIKAKIDEANQEIFRCNELR------INVLSAKKSELAEVSSLYTQME 122
Query: 706 AAISDERSARESLKSKRQEIDSVQSRINMMKN------AISVDDIDGSIRNMEHRIAHET 759
+ + R ++ K++E D++ + ++ + +++D +++I + +
Sbjct: 123 SLVPQSEGYRMVIEEKKKEFDTLLEALRNLRCTTSDQLCFTKEELDHLSYIAQYQIEYGS 182
Query: 760 LPLKEEKQIIREIKQLKQRREQISSSIGEHDEVQLAFDQKDQIEEKMKFLRKEADSLREN 819
+ L+EE +++E ++ D + L+ E++ R ++ +L N
Sbjct: 183 IGLEEEDWMLKETEK--------------PDGIILS-------EKEASINRVKSMALELN 221
Query: 820 VIKAE--AATQAVKKLHREESEKLKRLLGQFKAAD-------EIRQEAYKHWQSLKKQAY 870
+K E A T + L S+KL + + D E R Y + L+ Q
Sbjct: 222 EVKNELDAITWKINDL----SDKLWKSQNNIRVLDLEKAHILEKRDRFYARIKMLRIQRD 277
Query: 871 DKNQHFWKYKDDTKQANDLASKGDREALQHLCVNQVERVLELWNNNDEFRKEYVNSNIRS 930
N F++ +A +LA+ G+ L+ ++V+R + LWN++ FR++YV S
Sbjct: 278 KGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTLWNDDKAFREDYVRRISHS 337
Query: 931 TLRRLKTLDGR 941
R DGR
Sbjct: 338 LCERELNEDGR 348
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 1062 LREQRRLEEKAKAQEALERKKRIAEKAQTRAALRAQKEAEQKEK 1105
L+E++R E+ KA+ +ERK+++ EKA +AA+RAQKEAE+K K
Sbjct: 422 LKERKREEQLEKARLVMERKRKLQEKAAAKAAIRAQKEAEKKLK 465
>sp|P0DKC1|PPI3A_ARATH Proton pump-interactor 3A OS=Arabidopsis thaliana GN=PPI3A PE=3
SV=1
Length = 576
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 133/311 (42%), Gaps = 52/311 (16%)
Query: 652 YFLVKVPRYDDENLREQIKAAQSKVDEKTRSRDAIRDDIQTIRASYKEYAE------KLE 705
+++VK P YD+ ++ +I A ++ R I + A E AE ++E
Sbjct: 69 FYIVKQPVYDNPEIKAKIDEANQEIFRCNELR------INVLSAKKSELAEVSSLYTQME 122
Query: 706 AAISDERSARESLKSKRQEIDSVQSRINMMKN------AISVDDIDGSIRNMEHRIAHET 759
+ + R ++ K++E D++ + ++ + +++D +++I + +
Sbjct: 123 SLVPQSEGYRMVIEEKKKEFDTLLEALRNLRCTTSDQLCFTKEELDHLSYIAQYQIEYGS 182
Query: 760 LPLKEEKQIIREIKQLKQRREQISSSIGEHDEVQLAFDQKDQIEEKMKFLRKEADSLREN 819
+ L+EE +++E ++ D + L+ E++ R ++ +L N
Sbjct: 183 IGLEEEDWMLKETEK--------------PDGIILS-------EKEASINRVKSMALELN 221
Query: 820 VIKAE--AATQAVKKLHREESEKLKRLLGQFKAAD-------EIRQEAYKHWQSLKKQAY 870
+K E A T + L S+KL + + D E R Y + L+ Q
Sbjct: 222 EVKNELDAITWKINDL----SDKLWKSQNNIRVLDLEKAHILEKRDRFYARIKMLRIQRD 277
Query: 871 DKNQHFWKYKDDTKQANDLASKGDREALQHLCVNQVERVLELWNNNDEFRKEYVNSNIRS 930
N F++ +A +LA+ G+ L+ ++V+R + LWN++ FR++YV S
Sbjct: 278 KGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTLWNDDKAFREDYVRRISHS 337
Query: 931 TLRRLKTLDGR 941
R DGR
Sbjct: 338 LCERELNEDGR 348
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 1062 LREQRRLEEKAKAQEALERKKRIAEKAQTRAALRAQKEAEQKEK 1105
L+E++R E+ KA+ +ERK+++ EKA +AA+RAQKEAE+K K
Sbjct: 422 LKERKREEQLEKARLVMERKRKLQEKAAAKAAIRAQKEAEKKLK 465
>sp|Q8VZN4|PPI4_ARATH Proton pump-interactor 4 OS=Arabidopsis thaliana GN=PPI4 PE=2 SV=1
Length = 439
Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 855 RQEAYKHWQSLKKQAYDKNQHFWKYKDDTKQANDLASKGDREALQHLCVNQVERVLELWN 914
R +A + + L+ Q N F++ + K+A +LA+ G+ L+ L ++VE+ + WN
Sbjct: 154 RDKAVERIKFLRMQRDKGNAAFYQSRVVMKKAIELAASGNVRDLEELADSEVEKFMSRWN 213
Query: 915 NNDEFRKEY 923
N+ FR Y
Sbjct: 214 NDKAFRDNY 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.126 0.335
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 409,653,312
Number of Sequences: 539616
Number of extensions: 18725035
Number of successful extensions: 111218
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 3452
Number of HSP's that attempted gapping in prelim test: 71143
Number of HSP's gapped (non-prelim): 22890
length of query: 1113
length of database: 191,569,459
effective HSP length: 128
effective length of query: 985
effective length of database: 122,498,611
effective search space: 120661131835
effective search space used: 120661131835
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 67 (30.4 bits)