Query 001260
Match_columns 1113
No_of_seqs 424 out of 1537
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 19:03:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001260.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001260hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1weva_ g.50.1.2 (A:) PHD fing 98.2 1E-07 7.6E-12 85.2 1.5 57 697-753 11-74 (88)
2 d1f62a_ g.50.1.2 (A:) Williams 98.0 9.5E-07 6.9E-11 71.2 3.0 46 704-750 2-49 (51)
3 d1fp0a1 g.50.1.2 (A:19-88) Nuc 97.9 3.1E-06 2.3E-10 72.7 4.5 48 700-751 5-54 (70)
4 d1we9a_ g.50.1.2 (A:) PHD fing 97.8 6.9E-06 5E-10 69.0 4.5 51 702-752 6-59 (64)
5 d1mm2a_ g.50.1.2 (A:) Mi2-beta 97.8 5.1E-06 3.7E-10 69.4 3.4 48 700-751 7-56 (61)
6 d1wesa_ g.50.1.2 (A:) PHD Inhi 97.7 1.4E-05 1E-09 68.9 5.0 49 701-752 15-66 (71)
7 d2pnxa1 g.50.1.2 (A:195-245) I 97.4 2.2E-05 1.6E-09 63.5 1.8 45 703-750 3-50 (51)
8 d1weea_ g.50.1.2 (A:) PHD fing 97.4 7.1E-05 5.2E-09 64.0 4.9 50 703-753 17-68 (72)
9 d1wema_ g.50.1.2 (A:) Death as 97.3 3.4E-05 2.5E-09 66.5 2.3 53 699-753 13-72 (76)
10 d1wepa_ g.50.1.2 (A:) PHD fing 97.0 0.00022 1.6E-08 62.2 4.6 49 703-752 13-64 (79)
11 d1wewa_ g.50.1.2 (A:) Sumoylat 96.3 0.0015 1.1E-07 56.6 4.7 51 701-753 15-74 (78)
12 d1mm2a_ g.50.1.2 (A:) Mi2-beta 85.2 0.17 1.3E-05 41.1 2.1 47 825-882 10-56 (61)
13 d1wema_ g.50.1.2 (A:) Death as 85.1 0.23 1.7E-05 41.7 3.0 28 824-854 16-45 (76)
14 d1f62a_ g.50.1.2 (A:) Williams 82.8 0.25 1.8E-05 38.6 2.0 30 826-857 2-33 (51)
15 d1weva_ g.50.1.2 (A:) PHD fing 80.2 0.32 2.3E-05 42.0 1.9 53 824-882 16-72 (88)
16 d1zbdb_ g.50.1.1 (B:) Effector 78.6 0.61 4.4E-05 42.9 3.5 49 703-751 49-100 (124)
17 d1fp0a1 g.50.1.2 (A:19-88) Nuc 78.0 0.36 2.7E-05 40.2 1.6 30 825-857 8-37 (70)
18 d1wepa_ g.50.1.2 (A:) PHD fing 76.9 0.49 3.6E-05 40.3 2.1 29 826-856 13-44 (79)
19 d1efaa1 a.35.1.5 (A:2-60) Lac 76.3 0.94 6.9E-05 36.9 3.6 49 232-280 1-50 (59)
20 d1we9a_ g.50.1.2 (A:) PHD fing 76.2 0.52 3.8E-05 38.3 2.0 31 824-856 6-39 (64)
21 d1weea_ g.50.1.2 (A:) PHD fing 76.0 0.48 3.5E-05 39.4 1.8 32 53-87 13-47 (72)
22 d1wewa_ g.50.1.2 (A:) Sumoylat 75.4 1.1 8.1E-05 37.8 4.0 30 824-854 16-47 (78)
23 d1vyxa_ g.44.1.3 (A:) IE1B pro 73.8 0.15 1.1E-05 41.1 -1.9 52 699-750 3-55 (60)
24 d1r71a_ a.4.14.1 (A:) Transcri 70.5 1.5 0.00011 39.3 3.9 49 218-267 16-64 (114)
25 d1iyma_ g.44.1.1 (A:) EL5 RING 69.1 1.5 0.00011 34.8 3.0 49 700-750 3-51 (55)
26 d1tbna_ g.49.1.1 (A:) Protein 69.0 1.3 9.2E-05 36.3 2.7 34 702-735 19-53 (66)
27 d2hsga1 a.35.1.5 (A:2-58) Gluc 68.2 1.6 0.00012 35.2 3.1 47 234-280 2-49 (57)
28 d1uxda_ a.35.1.5 (A:) Fructose 67.5 1.7 0.00012 35.2 3.2 48 234-281 1-52 (59)
29 d1ijwc_ a.4.1.2 (C:) HIN recom 67.1 2.3 0.00016 33.0 3.7 32 221-253 10-41 (47)
30 d1nd9a_ a.6.1.6 (A:) N-termina 62.8 1.6 0.00012 34.4 2.0 24 234-257 3-26 (49)
31 d1xa6a3 g.49.1.1 (A:209-270) B 61.7 2.7 0.00019 33.8 3.3 34 702-735 15-49 (62)
32 d1faqa_ g.49.1.1 (A:) RAF-1 {H 58.7 2.8 0.00021 32.6 2.9 32 702-736 14-45 (52)
33 d2pnxa1 g.50.1.2 (A:195-245) I 58.4 1.9 0.00014 33.6 1.8 30 825-855 3-34 (51)
34 d1wila_ g.50.1.3 (A:) Hypothet 57.1 2.3 0.00017 36.8 2.2 50 700-751 13-76 (89)
35 d1ptqa_ g.49.1.1 (A:) Protein 56.7 3.1 0.00022 32.0 2.8 33 702-734 11-44 (50)
36 d1r79a_ g.49.1.1 (A:) Diacylgl 55.9 2.2 0.00016 36.6 1.9 33 702-734 38-72 (84)
37 d2icta1 a.35.1.3 (A:8-94) Anti 51.6 4.7 0.00034 34.4 3.4 53 223-275 4-57 (87)
38 d2b5aa1 a.35.1.3 (A:1-77) Regu 51.2 7.5 0.00054 31.8 4.5 52 221-272 11-63 (77)
39 d1qpza1 a.35.1.5 (A:2-58) Puri 49.8 4.8 0.00035 32.3 2.9 46 235-280 2-48 (57)
40 d2r1jl1 a.35.1.2 (L:3-68) P22 44.9 9.6 0.0007 30.2 4.1 51 221-271 4-55 (66)
41 d1j5ya1 a.4.5.1 (A:3-67) Putat 43.9 6.1 0.00044 31.8 2.7 33 222-254 10-43 (65)
42 d2cg4a1 a.4.5.32 (A:4-66) Regu 43.6 5.8 0.00042 31.8 2.5 33 222-254 8-40 (63)
43 d1i1ga1 a.4.5.32 (A:2-61) LprA 43.5 5.9 0.00043 31.6 2.5 32 223-254 7-38 (60)
44 d1weqa_ g.50.1.2 (A:) PHD fing 43.4 10 0.00076 32.6 4.3 35 717-752 45-80 (85)
45 d1kbea_ g.49.1.1 (A:) Kinase s 42.6 6.4 0.00046 30.5 2.5 29 704-735 16-44 (49)
46 d2ev0a1 a.4.5.24 (A:2-62) Mang 41.1 8.2 0.0006 31.0 3.1 26 229-254 17-42 (61)
47 d1r69a_ a.35.1.2 (A:) 434 C1 r 40.9 16 0.0012 28.5 4.9 51 221-271 2-52 (63)
48 d1weoa_ g.44.1.1 (A:) Cellulos 40.9 2.4 0.00017 36.9 -0.3 50 701-751 15-67 (93)
49 d1vz0a1 a.4.14.1 (A:116-208) P 40.8 8.1 0.00059 33.6 3.2 49 219-268 6-54 (93)
50 d2cfxa1 a.4.5.32 (A:1-63) Tran 40.6 6.9 0.0005 31.4 2.5 33 222-254 8-40 (63)
51 d1z05a1 a.4.5.63 (A:10-80) Tra 39.4 8.6 0.00062 31.2 3.0 35 220-254 7-41 (71)
52 d2cyya1 a.4.5.32 (A:5-64) Puta 38.7 7.8 0.00057 30.7 2.5 32 223-254 7-38 (60)
53 d2a6ca1 a.35.1.13 (A:1-69) HTH 38.6 17 0.0012 29.2 4.7 56 220-275 6-63 (69)
54 d1wesa_ g.50.1.2 (A:) PHD Inhi 38.4 6.5 0.00047 32.6 2.0 46 826-881 17-64 (71)
55 d1a04a1 a.4.6.2 (A:150-216) Ni 37.0 10 0.00073 30.6 3.0 30 224-255 14-43 (67)
56 d1s6la1 a.4.5.79 (A:21-80) Alk 36.7 7.8 0.00057 31.4 2.2 34 222-255 5-38 (60)
57 d1y9qa1 a.35.1.8 (A:4-82) Prob 35.9 19 0.0014 29.3 4.7 51 221-271 9-60 (79)
58 d1y7ya1 a.35.1.3 (A:5-73) Rest 34.2 21 0.0015 28.5 4.5 53 219-271 8-61 (69)
59 d2jn6a1 a.4.1.19 (A:1-89) Unch 33.0 11 0.00076 32.0 2.6 34 218-251 7-41 (89)
60 d1biaa1 a.4.5.1 (A:1-63) Bioti 31.6 11 0.00083 30.1 2.4 32 223-254 9-40 (63)
61 d1wila_ g.50.1.3 (A:) Hypothet 30.2 10 0.00075 32.6 2.0 35 825-861 16-51 (89)
62 d1yioa1 a.4.6.2 (A:131-200) Re 29.4 11 0.00082 30.6 2.1 30 224-255 20-49 (70)
63 d1v5na_ g.49.1.3 (A:) Pdi-like 27.9 14 0.001 31.9 2.5 31 825-857 48-79 (89)
64 d1v5na_ g.49.1.3 (A:) Pdi-like 27.0 15 0.0011 31.8 2.4 33 56-90 47-80 (89)
65 d1ub9a_ a.4.5.28 (A:) Hypothet 26.6 13 0.00095 31.6 2.1 33 222-254 19-51 (100)
66 d1utxa_ a.35.1.3 (A:) Putative 26.1 28 0.002 27.5 3.9 48 225-272 6-54 (66)
67 d2isya1 a.4.5.24 (A:2-64) Iron 25.2 21 0.0015 28.8 2.9 25 230-254 20-44 (63)
68 d1u2wa1 a.4.5.5 (A:12-119) Cad 24.8 16 0.0012 32.1 2.4 33 222-254 34-66 (108)
69 d1z6ra1 a.4.5.63 (A:12-81) Mlc 24.4 17 0.0013 29.4 2.4 36 220-255 6-41 (70)
70 d2croa_ a.35.1.2 (A:) cro 434 22.7 50 0.0036 25.7 4.9 35 221-255 4-38 (65)
71 d1sfxa_ a.4.5.50 (A:) Hypothet 22.1 23 0.0017 30.7 2.9 33 222-254 23-55 (109)
72 d1v87a_ g.44.1.1 (A:) Deltex p 22.1 18 0.0013 31.5 2.1 50 702-751 25-91 (114)
73 d1q1ha_ a.4.5.41 (A:) Transcri 21.6 27 0.002 30.2 3.1 35 220-254 19-54 (88)
74 d1v6ga1 g.39.1.3 (A:1-41) Acti 20.9 19 0.0014 27.1 1.6 30 52-85 11-41 (41)
No 1
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.24 E-value=1e-07 Score=85.16 Aligned_cols=57 Identities=26% Similarity=0.666 Sum_probs=45.9
Q ss_pred CCCCCCCcCcccCCCCC-CCCCeEEccccCcccccccccCc------ccCCCcccccccccccc
Q 001260 697 FSKEHPRSCDICRRSET-ILNPILICSGCKVAVHLDCYRNA------KESTGPWYCELCEELLS 753 (1113)
Q Consensus 697 ~~ke~~~~CsVC~~~E~-~~N~IV~Cd~C~laVHq~CYGi~------~ipeg~WlCd~C~~~~~ 753 (1113)
+..+..++|.||+.... ..+.||+|++|...||+.|++++ .++++.|+|..|.....
T Consensus 11 ~~~~~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~~ 74 (88)
T d1weva_ 11 FAMEMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp CHHHHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred ccCcCcCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCchHh
Confidence 44556788999997654 46889999999999999999964 35678999999986543
No 2
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.03 E-value=9.5e-07 Score=71.25 Aligned_cols=46 Identities=33% Similarity=0.922 Sum_probs=39.3
Q ss_pred cCcccCCCCCCCCCeEEccccCcccccccccCc--ccCCCccccccccc
Q 001260 704 SCDICRRSETILNPILICSGCKVAVHLDCYRNA--KESTGPWYCELCEE 750 (1113)
Q Consensus 704 ~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi~--~ipeg~WlCd~C~~ 750 (1113)
.|.||+..+. .+.||+|++|+..+|..|++++ .+|.+.|+|..|+.
T Consensus 2 ~C~vC~~~~~-~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGE-DDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSC-CSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCC-CCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 5999987543 5789999999999999999875 46788999999974
No 3
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.93 E-value=3.1e-06 Score=72.69 Aligned_cols=48 Identities=27% Similarity=0.829 Sum_probs=39.4
Q ss_pred CCCCcCcccCCCCCCCCCeEEccccCcccccccccC--cccCCCcccccccccc
Q 001260 700 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYRN--AKESTGPWYCELCEEL 751 (1113)
Q Consensus 700 e~~~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi--~~ipeg~WlCd~C~~~ 751 (1113)
+...+|.||.+ .+.||.|++|...||..|++. ..+|.+.|+|..|...
T Consensus 5 d~c~~C~~C~~----~~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~ 54 (70)
T d1fp0a1 5 DSATICRVCQK----PGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 54 (70)
T ss_dssp SSSSCCSSSCS----SSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCCCCCCCC----cCEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCc
Confidence 34567888876 356999999999999999995 4677889999999764
No 4
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.80 E-value=6.9e-06 Score=68.99 Aligned_cols=51 Identities=18% Similarity=0.404 Sum_probs=41.6
Q ss_pred CCcCcccCCCCCCCCCeEEccccCcccccccccCccc---CCCccccccccccc
Q 001260 702 PRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKE---STGPWYCELCEELL 752 (1113)
Q Consensus 702 ~~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi~~i---peg~WlCd~C~~~~ 752 (1113)
...|.||...+..++.||.|+.|+..+|+.|+++... +...|+|..|....
T Consensus 6 ~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~~ 59 (64)
T d1we9a_ 6 SGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCcC
Confidence 4679999986655567999999999999999998643 23689999998753
No 5
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.79 E-value=5.1e-06 Score=69.44 Aligned_cols=48 Identities=25% Similarity=0.742 Sum_probs=39.7
Q ss_pred CCCCcCcccCCCCCCCCCeEEccccCcccccccccCc--ccCCCcccccccccc
Q 001260 700 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYRNA--KESTGPWYCELCEEL 751 (1113)
Q Consensus 700 e~~~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi~--~ipeg~WlCd~C~~~ 751 (1113)
.+..+|.||++ .+.||.|++|...+|..|.++. .+|.+.|+|..|+..
T Consensus 7 ~~~~~C~~C~~----~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~ 56 (61)
T d1mm2a_ 7 HHMEFCRVCKD----GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCSSCTTTCC----CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCcCCCcCCCC----CCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCc
Confidence 34567999986 4679999999999999998754 456889999999754
No 6
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.70 E-value=1.4e-05 Score=68.93 Aligned_cols=49 Identities=24% Similarity=0.733 Sum_probs=37.5
Q ss_pred CCCcCcccCCCCCCCCCeEEcc--ccC-cccccccccCcccCCCccccccccccc
Q 001260 701 HPRSCDICRRSETILNPILICS--GCK-VAVHLDCYRNAKESTGPWYCELCEELL 752 (1113)
Q Consensus 701 ~~~~CsVC~~~E~~~N~IV~Cd--~C~-laVHq~CYGi~~ipeg~WlCd~C~~~~ 752 (1113)
+..+| ||+..+ ...+|.|+ +|. .-||..|+|+...|.+.|+|..|+...
T Consensus 15 e~~~C-iC~~~~--~~~~i~c~~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 66 (71)
T d1wesa_ 15 EPTYC-LCNQVS--YGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDS 66 (71)
T ss_dssp SCCCS-TTCCCC--CSSEECCSCTTCSCCCEETTTTTCSSCCSSCCCCTTTSSCC
T ss_pred CCCEE-EeCCCC--CCCEEEEECCCCCCcCccCccCCCCcCCCCcEECcCCcccc
Confidence 34566 999754 34566664 575 569999999999999999999998653
No 7
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=97.40 E-value=2.2e-05 Score=63.46 Aligned_cols=45 Identities=20% Similarity=0.699 Sum_probs=37.5
Q ss_pred CcCcccCCCCCCCCCeEEccc---cCcccccccccCcccCCCccccccccc
Q 001260 703 RSCDICRRSETILNPILICSG---CKVAVHLDCYRNAKESTGPWYCELCEE 750 (1113)
Q Consensus 703 ~~CsVC~~~E~~~N~IV~Cd~---C~laVHq~CYGi~~ipeg~WlCd~C~~ 750 (1113)
.+| ||+..+ .+.||.|++ |..-+|..|+|+...|.+.|+|..|+.
T Consensus 3 ~yC-~C~~~~--~~~mi~Cd~~~C~~~WfH~~Cvgl~~~p~~~w~C~~C~~ 50 (51)
T d2pnxa1 3 TYC-LCHQVS--YGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ 50 (51)
T ss_dssp EET-TTTEEC--CSEEEECSCTTCSSCEEEGGGGTCSSCCSSCCCCHHHHC
T ss_pred cEE-EcCCCC--CCCEEEEecCCCCCCCEeCCccCCCcCCCCcEECcCCCC
Confidence 478 898754 355999997 456799999999999999999999974
No 8
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.37 E-value=7.1e-05 Score=64.04 Aligned_cols=50 Identities=26% Similarity=0.525 Sum_probs=40.3
Q ss_pred CcCcccCCCCCCCCCeEEccccCcccccccccCcc--cCCCcccccccccccc
Q 001260 703 RSCDICRRSETILNPILICSGCKVAVHLDCYRNAK--ESTGPWYCELCEELLS 753 (1113)
Q Consensus 703 ~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi~~--ipeg~WlCd~C~~~~~ 753 (1113)
..| ||.......+.||+|++|+.-+|..|+|++. .+.+.|+|..|.....
T Consensus 17 ~~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~~~ 68 (72)
T d1weea_ 17 VDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSG 68 (72)
T ss_dssp ECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCS
T ss_pred EEe-eCCCCcCCCCeEEEeCCCCCcCchhhcCCccccCCCCcEECcCCcCcCC
Confidence 446 8987554467899999999999999999864 4467899999987644
No 9
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.32 E-value=3.4e-05 Score=66.46 Aligned_cols=53 Identities=23% Similarity=0.530 Sum_probs=41.0
Q ss_pred CCCCCcCcccCCCCCCCCCeEEccccCcccccccccCcc-------cCCCcccccccccccc
Q 001260 699 KEHPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAK-------ESTGPWYCELCEELLS 753 (1113)
Q Consensus 699 ke~~~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi~~-------ipeg~WlCd~C~~~~~ 753 (1113)
.++..+| ||+.... ++.||.|+.|..-+|..|+|+.. .+...|+|..|+....
T Consensus 13 d~~~~~C-iC~~~~~-~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~~~~ 72 (76)
T d1wema_ 13 DPNALYC-ICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp CTTCCCS-TTCCCCC-SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred CCCcCEE-ECCCccC-CCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECCCCcCcCC
Confidence 3455778 9987543 56799999999999999999763 2356799999987533
No 10
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.04 E-value=0.00022 Score=62.18 Aligned_cols=49 Identities=22% Similarity=0.529 Sum_probs=38.8
Q ss_pred CcCcccCCCCCCCCCeEEccccCcccccccccCccc--C-CCccccccccccc
Q 001260 703 RSCDICRRSETILNPILICSGCKVAVHLDCYRNAKE--S-TGPWYCELCEELL 752 (1113)
Q Consensus 703 ~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi~~i--p-eg~WlCd~C~~~~ 752 (1113)
.+| ||...+..+..||.|+.|+.-+|..|.|+... + .+.|+|..|....
T Consensus 13 v~C-iC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~ 64 (79)
T d1wepa_ 13 VYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred eEe-ECCCccCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCc
Confidence 455 99986544557999999999999999998742 2 3579999998653
No 11
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.34 E-value=0.0015 Score=56.61 Aligned_cols=51 Identities=24% Similarity=0.627 Sum_probs=38.4
Q ss_pred CCCcCcccCCCCCCCCCeEEcc--ccCcccccccccCcccC-------CCcccccccccccc
Q 001260 701 HPRSCDICRRSETILNPILICS--GCKVAVHLDCYRNAKES-------TGPWYCELCEELLS 753 (1113)
Q Consensus 701 ~~~~CsVC~~~E~~~N~IV~Cd--~C~laVHq~CYGi~~ip-------eg~WlCd~C~~~~~ 753 (1113)
+...| ||+.... .+.+|.|+ .|..-||..|+|+...+ ...|+|..|.....
T Consensus 15 ~~~~C-~C~~~~~-~~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T d1wewa_ 15 IKVRC-VCGNSLE-TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCCC-SSCCCCC-CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CccEe-ECCCccC-CCcEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCcCC
Confidence 34567 9997553 46788887 79999999999987532 23599999987643
No 12
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.18 E-value=0.17 Score=41.15 Aligned_cols=47 Identities=19% Similarity=0.668 Sum_probs=34.0
Q ss_pred cccccccCcCCceeecCCCCcccccchhhhhhcCceEEEeeCCCceeeeecCCCCChh
Q 001260 825 DVCCICRHKHGICIKCNYGNCQTTFHPTCARSAGFYLNVKSTGGNFQHKAYCEKHSLE 882 (1113)
Q Consensus 825 ~~C~iC~~~~GA~IqCs~~~C~~~FHvtCA~~aG~~~~~k~~~g~~~~~iyC~kHs~~ 882 (1113)
..|.+|+. .|.+|.|. .|..+||..|....--.+ ..+.| ||+.++..
T Consensus 10 ~~C~~C~~-~g~lv~Cd--~C~~~~H~~C~~~~~~~~----~~~~W----~C~~C~~~ 56 (61)
T d1mm2a_ 10 EFCRVCKD-GGELLCCD--TCPSSYHIHCLNPPLPEI----PNGEW----LCPRCTCP 56 (61)
T ss_dssp SSCTTTCC-CSSCBCCS--SSCCCBCSSSSSSCCSSC----CSSCC----CCTTTTTT
T ss_pred CCCcCCCC-CCeEEEeC--CCCccCchhhcCCCcCcC----CCCcE----ECCCCcCc
Confidence 47999997 48999999 999999999974322111 12333 89998764
No 13
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.14 E-value=0.23 Score=41.66 Aligned_cols=28 Identities=36% Similarity=0.886 Sum_probs=23.8
Q ss_pred CcccccccCc--CCceeecCCCCcccccchhhh
Q 001260 824 IDVCCICRHK--HGICIKCNYGNCQTTFHPTCA 854 (1113)
Q Consensus 824 r~~C~iC~~~--~GA~IqCs~~~C~~~FHvtCA 854 (1113)
...| +|++. .+.+|+|. .|..+||..|.
T Consensus 16 ~~~C-iC~~~~~~~~mi~Cd--~C~~w~H~~Cv 45 (76)
T d1wema_ 16 ALYC-ICRQPHNNRFMICCD--RCEEWFHGDCV 45 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECS--SSCCEEEHHHH
T ss_pred cCEE-ECCCccCCCeEEEEC--CCCCcCCcccc
Confidence 4567 89875 56799999 99999999997
No 14
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.80 E-value=0.25 Score=38.60 Aligned_cols=30 Identities=40% Similarity=0.915 Sum_probs=25.3
Q ss_pred ccccccCc--CCceeecCCCCcccccchhhhhhc
Q 001260 826 VCCICRHK--HGICIKCNYGNCQTTFHPTCARSA 857 (1113)
Q Consensus 826 ~C~iC~~~--~GA~IqCs~~~C~~~FHvtCA~~a 857 (1113)
+|.+|+.. .+-+|.|. .|..+||..|....
T Consensus 2 ~C~vC~~~~~~~~~i~Cd--~C~~~~H~~C~~p~ 33 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCD--ECNKAFHLFCLRPA 33 (51)
T ss_dssp CCTTTCCSSCCSCCEECT--TTCCEECHHHHCTT
T ss_pred CCcCcCCCCCCCCEEEcC--CCCCCCCCCCCCCC
Confidence 68899875 46789999 99999999998654
No 15
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=80.22 E-value=0.32 Score=42.04 Aligned_cols=53 Identities=19% Similarity=0.533 Sum_probs=34.1
Q ss_pred CcccccccCc----CCceeecCCCCcccccchhhhhhcCceEEEeeCCCceeeeecCCCCChh
Q 001260 824 IDVCCICRHK----HGICIKCNYGNCQTTFHPTCARSAGFYLNVKSTGGNFQHKAYCEKHSLE 882 (1113)
Q Consensus 824 r~~C~iC~~~----~GA~IqCs~~~C~~~FHvtCA~~aG~~~~~k~~~g~~~~~iyC~kHs~~ 882 (1113)
.+.|.+|++. .+.+|.|. .|..+||..|.............+..| ||+.....
T Consensus 16 ~~~C~iC~~~~~~~~~~~v~Cd--~C~~~~H~~C~~p~~~~~~~~~~~~~W----~C~~C~~~ 72 (88)
T d1weva_ 16 GLACVVCRQMTVASGNQLVECQ--ECHNLYHQDCHKPQVTDKEVNDPRLVW----YCARCTRQ 72 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECS--SSCCEEETTTSSSCCCHHHHHCTTCCC----CCHHHHHH
T ss_pred cCCccCCCCccCCCCCeEEEcC--CCCCccccccCCCcccccccccCCCeE----ECcccCch
Confidence 4689999974 35789999 899999999965331111011122334 88877543
No 16
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=78.62 E-value=0.61 Score=42.91 Aligned_cols=49 Identities=22% Similarity=0.622 Sum_probs=36.7
Q ss_pred CcCcccCCCCC-CCCCeEEccccCcccccccccCccc--CCCcccccccccc
Q 001260 703 RSCDICRRSET-ILNPILICSGCKVAVHLDCYRNAKE--STGPWYCELCEEL 751 (1113)
Q Consensus 703 ~~CsVC~~~E~-~~N~IV~Cd~C~laVHq~CYGi~~i--peg~WlCd~C~~~ 751 (1113)
..|.+|...-. ..+.-..|..|+..|+..|...... +...|+|..|...
T Consensus 49 ~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k~ 100 (124)
T d1zbdb_ 49 NRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 100 (124)
T ss_dssp SBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CcCcccCCcccCCCCCCCcCccCCcccccCCCCCccCCCCCCCEECccCcch
Confidence 45999987533 4567779999999999999653322 2445999999875
No 17
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.04 E-value=0.36 Score=40.22 Aligned_cols=30 Identities=33% Similarity=0.888 Sum_probs=25.6
Q ss_pred cccccccCcCCceeecCCCCcccccchhhhhhc
Q 001260 825 DVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 857 (1113)
Q Consensus 825 ~~C~iC~~~~GA~IqCs~~~C~~~FHvtCA~~a 857 (1113)
..|.+|++. |-+|.|. .|..+||+.|....
T Consensus 8 ~~C~~C~~~-~~ll~Cd--~C~~~~H~~C~~p~ 37 (70)
T d1fp0a1 8 TICRVCQKP-GDLVMCN--QCEFCFHLDCHLPA 37 (70)
T ss_dssp SCCSSSCSS-SCCEECT--TSSCEECTTSSSTT
T ss_pred CCCCCCCCc-CEEEECC--CCChhhccccCCCC
Confidence 578888874 8899999 89999999998643
No 18
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.90 E-value=0.49 Score=40.26 Aligned_cols=29 Identities=38% Similarity=0.923 Sum_probs=23.8
Q ss_pred ccccccCc---CCceeecCCCCcccccchhhhhh
Q 001260 826 VCCICRHK---HGICIKCNYGNCQTTFHPTCARS 856 (1113)
Q Consensus 826 ~C~iC~~~---~GA~IqCs~~~C~~~FHvtCA~~ 856 (1113)
+|++|++. .+.+|+|. .|..+||..|.-.
T Consensus 13 v~CiC~~~~~~~~~mI~Cd--~C~~W~H~~C~g~ 44 (79)
T d1wepa_ 13 VYCLCRQPYNVNHFMIECG--LCQDWFHGSCVGI 44 (79)
T ss_dssp CCSTTSCSCCSSSCEEEBT--TTCCEEEHHHHTC
T ss_pred eEeECCCccCCCCcEEECC--CCCCcEeccccCc
Confidence 45599974 56799999 9999999999843
No 19
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=76.30 E-value=0.94 Score=36.89 Aligned_cols=49 Identities=14% Similarity=0.199 Sum_probs=43.8
Q ss_pred CCcchhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHhhhccccccc
Q 001260 232 GKVNVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWLSNHAYLGGL 280 (1113)
Q Consensus 232 gkv~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl~~~~~~~~~ 280 (1113)
.||+++|||.+.|+|+-++--+|. ....+++..-+|..-.+..-|.+..
T Consensus 1 k~~Ti~diA~~agvS~sTVSr~l~~~~~vs~~tr~rI~~~a~~lgY~pn~ 50 (59)
T d1efaa1 1 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNR 50 (59)
T ss_dssp CCCCHHHHHHTTTSCHHHHHHHHTTCSSCCTHHHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHCCCCcCCHHHHHHHHHHHHHHCCCcCH
Confidence 379999999999999999999998 5678999999999999998887643
No 20
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=76.19 E-value=0.52 Score=38.33 Aligned_cols=31 Identities=26% Similarity=0.657 Sum_probs=25.6
Q ss_pred CcccccccCc---CCceeecCCCCcccccchhhhhh
Q 001260 824 IDVCCICRHK---HGICIKCNYGNCQTTFHPTCARS 856 (1113)
Q Consensus 824 r~~C~iC~~~---~GA~IqCs~~~C~~~FHvtCA~~ 856 (1113)
...|.+|++. ...+|+|. .|..+||..|...
T Consensus 6 ~~~C~~C~~~~~~~~~~I~Cd--~C~~w~H~~C~~~ 39 (64)
T d1we9a_ 6 SGQCGACGESYAADEFWICCD--LCEMWFHGKCVKI 39 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECS--SSCCEEETTTTTC
T ss_pred CCcCcCcCCCCCCCCCEEEcC--CCCccCCcccCCc
Confidence 3689999974 34679999 9999999999843
No 21
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=75.95 E-value=0.48 Score=39.40 Aligned_cols=32 Identities=25% Similarity=0.551 Sum_probs=24.7
Q ss_pred hcccccccccccc---cCceeeCCCCCCCcccchhhhh
Q 001260 53 TRMKLVCNICRVK---CGACVRCSHGTCRTSFHPICAR 87 (1113)
Q Consensus 53 ~R~~LkC~iC~~k---~GAcIqCs~~~C~~sFHvtCA~ 87 (1113)
..|.+.| +|+.. ..-.|+|. .|.++||..|.-
T Consensus 13 ~~~~~~C-~C~~~~~~~~~mv~Cd--~C~~w~H~~C~g 47 (72)
T d1weea_ 13 DNWKVDC-KCGTKDDDGERMLACD--GCGVWHHTRCIG 47 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECS--SSCEEEETTTTT
T ss_pred CCCeEEe-eCCCCcCCCCeEEEeC--CCCCcCchhhcC
Confidence 3566788 68754 33589998 899999999983
No 22
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=75.41 E-value=1.1 Score=37.79 Aligned_cols=30 Identities=23% Similarity=0.574 Sum_probs=24.8
Q ss_pred CcccccccCc--CCceeecCCCCcccccchhhh
Q 001260 824 IDVCCICRHK--HGICIKCNYGNCQTTFHPTCA 854 (1113)
Q Consensus 824 r~~C~iC~~~--~GA~IqCs~~~C~~~FHvtCA 854 (1113)
...| +|+.. .|.+|.|.-..|..|||..|.
T Consensus 16 ~~~C-~C~~~~~~~~~i~c~c~~C~~W~H~~Cv 47 (78)
T d1wewa_ 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCV 47 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHH
T ss_pred ccEe-ECCCccCCCcEEEEeCCCCCcCCCcccc
Confidence 3567 89985 567888887789999999997
No 23
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=73.80 E-value=0.15 Score=41.06 Aligned_cols=52 Identities=21% Similarity=0.301 Sum_probs=32.6
Q ss_pred CCCCCcCcccCCCCCC-CCCeEEccccCcccccccccCcccCCCccccccccc
Q 001260 699 KEHPRSCDICRRSETI-LNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEE 750 (1113)
Q Consensus 699 ke~~~~CsVC~~~E~~-~N~IV~Cd~C~laVHq~CYGi~~ipeg~WlCd~C~~ 750 (1113)
.++...|.||++.... ......|.+|.-.||..|...-....+.+.|..|..
T Consensus 3 ded~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~ 55 (60)
T d1vyxa_ 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGV 55 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCC
T ss_pred CCCCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCC
Confidence 3556789999974331 112236788999999999852211124456777764
No 24
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=70.52 E-value=1.5 Score=39.30 Aligned_cols=49 Identities=18% Similarity=0.319 Sum_probs=41.4
Q ss_pred CcchHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccccccccchhhHHH
Q 001260 218 ALNFTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLADGTFASDLQCKL 267 (1113)
Q Consensus 218 ~~~~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~~~~~~~~~~~k~ 267 (1113)
-.+.+..+++|++.|. +.++||..+|.|...|...|.=..+.+.++--|
T Consensus 16 p~e~A~a~~~l~~~g~-s~~eiA~~~G~s~~~V~~~l~L~~lp~~v~~~~ 64 (114)
T d1r71a_ 16 PREIADFIGRELAKGK-KKGDIAKEIGKSPAFITQHVTLLDLPEKIADAF 64 (114)
T ss_dssp HHHHHHHHHHHHHTTC-CHHHHHHHHTCCHHHHHHHHGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-CHHHHHHHHCCcHHHHHHHHHHhCCCHHHHHHH
Confidence 3567899999999987 999999999999999999987667777765544
No 25
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=69.07 E-value=1.5 Score=34.77 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=32.8
Q ss_pred CCCCcCcccCCCCCCCCCeEEccccCcccccccccCcccCCCccccccccc
Q 001260 700 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEE 750 (1113)
Q Consensus 700 e~~~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi~~ipeg~WlCd~C~~ 750 (1113)
+++..|.||++.-..++.++.+..|+-.||..|...-.. ..-.|..|+.
T Consensus 3 ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~--~~~~CP~CR~ 51 (55)
T d1iyma_ 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG--SHSTCPLCRL 51 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT--TCCSCSSSCC
T ss_pred CCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHH--hCCcCCCCCC
Confidence 456779999985334567778888999999999752111 1223666654
No 26
>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}
Probab=69.01 E-value=1.3 Score=36.31 Aligned_cols=34 Identities=32% Similarity=0.719 Sum_probs=26.4
Q ss_pred CCcCcccCCCC-CCCCCeEEccccCcccccccccC
Q 001260 702 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 735 (1113)
Q Consensus 702 ~~~CsVC~~~E-~~~N~IV~Cd~C~laVHq~CYGi 735 (1113)
...|.+|...= ....+-+.|..|++.+|..|...
T Consensus 19 ~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~ 53 (66)
T d1tbna_ 19 PTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRS 53 (66)
T ss_dssp CCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTT
T ss_pred CcCCcCCCCcccCcccCccccCcccCeEChHHhcc
Confidence 45799998642 22456799999999999999753
No 27
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=68.21 E-value=1.6 Score=35.22 Aligned_cols=47 Identities=13% Similarity=0.217 Sum_probs=41.9
Q ss_pred cchhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHhhhccccccc
Q 001260 234 VNVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWLSNHAYLGGL 280 (1113)
Q Consensus 234 v~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl~~~~~~~~~ 280 (1113)
|+++|||.+.|+|.-++--+|. ....+++...+|.+-.+..-|.+..
T Consensus 2 vTi~dvA~~agvS~~TVSr~Ln~~~~Vs~~tr~rV~~aa~~lgY~pn~ 49 (57)
T d2hsga1 2 VTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNA 49 (57)
T ss_dssp CCHHHHHHHTTSCHHHHHHHHTTCTTSCHHHHHHHHHHHHHHTCCSCH
T ss_pred cCHHHHHHHHCcCHHHHHHHhCCCCcCCHHHHHHHHHHHHHHCcCCCH
Confidence 7899999999999999999999 4678999999999999888886653
No 28
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=67.54 E-value=1.7 Score=35.22 Aligned_cols=48 Identities=15% Similarity=0.212 Sum_probs=42.0
Q ss_pred cchhhhhhhhcCChhhhhhccccc----cccchhhHHHHHHhhhcccccccc
Q 001260 234 VNVKDIASDIGISPDLLKTTLADG----TFASDLQCKLVKWLSNHAYLGGLL 281 (1113)
Q Consensus 234 v~~~~~a~~~g~s~~~~~a~l~~~----~~~~~~~~k~~~wl~~~~~~~~~~ 281 (1113)
|+++|||.+.|+|+-++--.|+.. ..++..+.+|..-.+..-|.+...
T Consensus 1 vTl~diA~~agvS~sTVSrvLn~~~~~~~vs~~tr~rV~~~a~~lgY~pn~~ 52 (59)
T d1uxda_ 1 MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAV 52 (59)
T ss_dssp CCHHHHHHHHTSCTTHHHHHHHTCGGGTTCTTTTHHHHHHHHHHHTCCCCSC
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCcCcCCHHHHHHHHHHHHHHCCCcCHH
Confidence 689999999999999999999832 289999999999999998876544
No 29
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=67.11 E-value=2.3 Score=33.03 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=25.9
Q ss_pred hHHHHHHHhhhCCcchhhhhhhhcCChhhhhhc
Q 001260 221 FTLILKKLIDRGKVNVKDIASDIGISPDLLKTT 253 (1113)
Q Consensus 221 ~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~ 253 (1113)
----.++|++.|. ++++||.++|+|..+|---
T Consensus 10 q~~~a~~l~~~G~-s~~~iA~~~gVSr~TiYry 41 (47)
T d1ijwc_ 10 EQEQISRLLEKGH-PRQQLAIIFGIGVSTLYRY 41 (47)
T ss_dssp HHHHHHHHHHTTC-CHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHCCC-CHHHHHHHHCcCHHHHHhh
Confidence 3445788889995 9999999999999887543
No 30
>d1nd9a_ a.6.1.6 (A:) N-terminal subdomain of bacterial translation initiation factor IF2 {Escherichia coli [TaxId: 562]}
Probab=62.83 E-value=1.6 Score=34.36 Aligned_cols=24 Identities=29% Similarity=0.390 Sum_probs=20.8
Q ss_pred cchhhhhhhhcCChhhhhhccccc
Q 001260 234 VNVKDIASDIGISPDLLKTTLADG 257 (1113)
Q Consensus 234 v~~~~~a~~~g~s~~~~~a~l~~~ 257 (1113)
|+|++.|.++|+++|.|-.-|.++
T Consensus 3 vTVk~lA~~v~~~vd~Ll~Ql~~A 26 (49)
T d1nd9a_ 3 VTIKTLAAERQTSVERLVQQFADA 26 (49)
T ss_dssp ECTTHHHHHHSSSHHHHHHHHHHH
T ss_pred ccHHHHHHHHCcCHHHHHHHHHHc
Confidence 799999999999999997776643
No 31
>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.70 E-value=2.7 Score=33.84 Aligned_cols=34 Identities=26% Similarity=0.697 Sum_probs=26.7
Q ss_pred CCcCcccCCCC-CCCCCeEEccccCcccccccccC
Q 001260 702 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 735 (1113)
Q Consensus 702 ~~~CsVC~~~E-~~~N~IV~Cd~C~laVHq~CYGi 735 (1113)
...|++|.+.= ....+-+.|..|++.+|..|...
T Consensus 15 pt~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~ 49 (62)
T d1xa6a3 15 PHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKH 49 (62)
T ss_dssp CCBCTTTCCBCCTTTTCEECCSSSCCCBCTGGGTT
T ss_pred CCCCcccCccccccccCeEEcCCCCchhhHHHHhh
Confidence 45799998742 22457899999999999999854
No 32
>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.75 E-value=2.8 Score=32.61 Aligned_cols=32 Identities=25% Similarity=0.532 Sum_probs=25.0
Q ss_pred CCcCcccCCCCCCCCCeEEccccCcccccccccCc
Q 001260 702 PRSCDICRRSETILNPILICSGCKVAVHLDCYRNA 736 (1113)
Q Consensus 702 ~~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi~ 736 (1113)
...|++|.+.=. .-+.|..|++.+|..|+...
T Consensus 14 ~~~C~~C~~~i~---~g~~C~~C~~~~H~~C~~~v 45 (52)
T d1faqa_ 14 LAFCDICQKFLL---NGFRCQTCGYKFHEHCSTKV 45 (52)
T ss_dssp CEECTTSSSEEC---SEEECTTTTCCBCSTTSSSS
T ss_pred CcCCccCCCccc---cCCCcCCCCChhhhhhhccc
Confidence 367999986321 34899999999999999643
No 33
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=58.41 E-value=1.9 Score=33.63 Aligned_cols=30 Identities=30% Similarity=0.753 Sum_probs=23.3
Q ss_pred cccccccCc-CCceeecCCCCc-ccccchhhhh
Q 001260 825 DVCCICRHK-HGICIKCNYGNC-QTTFHPTCAR 855 (1113)
Q Consensus 825 ~~C~iC~~~-~GA~IqCs~~~C-~~~FHvtCA~ 855 (1113)
..| +|++. .|-+|.|...+| ..+||..|.-
T Consensus 3 ~yC-~C~~~~~~~mi~Cd~~~C~~~WfH~~Cvg 34 (51)
T d2pnxa1 3 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 34 (51)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEEGGGGT
T ss_pred cEE-EcCCCCCCCEEEEecCCCCCCCEeCCccC
Confidence 357 78875 577999997677 4799999984
No 34
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.14 E-value=2.3 Score=36.79 Aligned_cols=50 Identities=22% Similarity=0.680 Sum_probs=37.2
Q ss_pred CCCCcCcccCCCCCCCCCeEEccccCccccccccc---Cc------c-----cCCCcccccccccc
Q 001260 700 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYR---NA------K-----ESTGPWYCELCEEL 751 (1113)
Q Consensus 700 e~~~~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYG---i~------~-----ipeg~WlCd~C~~~ 751 (1113)
.+|..|.||.-.. .+.++-|.-|...+|..|.. -. . ..+-.|-|.-|.+.
T Consensus 13 ~~D~mC~vC~v~t--~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC~~C~nl 76 (89)
T d1wila_ 13 VNDEMCDVCEVWT--AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCSCCCTTTCCCC--SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CcCccccccCccc--ccceecceeecchhhHHHHHHhcccccHHHHHHHHhhcCCCCcchhhhcch
Confidence 4567899995433 58888999999999999982 11 0 12456999999875
No 35
>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.72 E-value=3.1 Score=32.00 Aligned_cols=33 Identities=30% Similarity=0.654 Sum_probs=26.0
Q ss_pred CCcCcccCCCCC-CCCCeEEccccCccccccccc
Q 001260 702 PRSCDICRRSET-ILNPILICSGCKVAVHLDCYR 734 (1113)
Q Consensus 702 ~~~CsVC~~~E~-~~N~IV~Cd~C~laVHq~CYG 734 (1113)
...|++|...=. ...+-+.|..|++.+|..|..
T Consensus 11 ~~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T d1ptqa_ 11 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CcCCcccCCcccCcccCcEECCCCCCeeChhHcc
Confidence 357999986422 245789999999999999975
No 36
>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.87 E-value=2.2 Score=36.61 Aligned_cols=33 Identities=24% Similarity=0.574 Sum_probs=26.1
Q ss_pred CCcCcccCCCC-C-CCCCeEEccccCccccccccc
Q 001260 702 PRSCDICRRSE-T-ILNPILICSGCKVAVHLDCYR 734 (1113)
Q Consensus 702 ~~~CsVC~~~E-~-~~N~IV~Cd~C~laVHq~CYG 734 (1113)
..+|++|...= . ...+-+.|..|++.||..|..
T Consensus 38 ~~~C~~C~~~i~~~~~~qg~~C~~C~~~~H~~C~~ 72 (84)
T d1r79a_ 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred CCCCcccCcccCCccccCcEecCcCCchhhhhhcC
Confidence 56899998743 2 234569999999999999984
No 37
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=51.61 E-value=4.7 Score=34.39 Aligned_cols=53 Identities=17% Similarity=0.332 Sum_probs=46.3
Q ss_pred HHHHHHhhhCCcchhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHhhhcc
Q 001260 223 LILKKLIDRGKVNVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWLSNHA 275 (1113)
Q Consensus 223 ~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl~~~~ 275 (1113)
..||.+.+...+|..++|..+|||+.+|-.-++ ....++++-.||-+.|.-++
T Consensus 4 e~lke~r~~~glsq~~LA~~lGvs~~~is~ie~g~~~~s~~~~~kla~~lgvs~ 57 (87)
T d2icta1 4 DIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVIGSSP 57 (87)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTCCHHHHHHHHHTSSCCCHHHHHHHHHHTCSCH
T ss_pred HHHHHHHHHcCCCHHHHHHHHhhcHHHHHHHHHhccCCCHHHHHHHHHHHCcCH
Confidence 357889999999999999999999999988877 77889999999999887554
No 38
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=51.22 E-value=7.5 Score=31.79 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=40.8
Q ss_pred hHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHhh
Q 001260 221 FTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWLS 272 (1113)
Q Consensus 221 ~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl~ 272 (1113)
|+.-||+|..+.+.+.+++|..+|||+.+|..-.. ....+.+.-.+|-+.|.
T Consensus 11 ~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~ 63 (77)
T d2b5aa1 11 FGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALD 63 (77)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHhC
Confidence 57789999999999999999999999999887755 34455555566666554
No 39
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=49.78 E-value=4.8 Score=32.30 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=41.0
Q ss_pred chhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHhhhccccccc
Q 001260 235 NVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWLSNHAYLGGL 280 (1113)
Q Consensus 235 ~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl~~~~~~~~~ 280 (1113)
+++|||.+.|+|+-++--+|+ ....+++.+.+|..-.+..-|.+..
T Consensus 2 Ti~dvA~~agVS~sTVSr~ln~~~~vs~~tr~rV~~~a~~lgY~pn~ 48 (57)
T d1qpza1 2 TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSA 48 (57)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTCSCCCHHHHHHHHHHHHHHTCCCCH
T ss_pred CHHHHHHHHCcCHHHHHHHHCCCCccCHHHHHHHHHHHHHHCCCCCH
Confidence 679999999999999999999 4688999999999999988887654
No 40
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=44.88 E-value=9.6 Score=30.20 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=39.8
Q ss_pred hHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHh
Q 001260 221 FTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWL 271 (1113)
Q Consensus 221 ~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl 271 (1113)
++--||+|.++-..+..++|..+|+|+.+|..-.. .....++.-.+|.+-|
T Consensus 4 ig~rik~~R~~~g~tq~~lA~~~gvs~~~i~~~e~g~~~p~~~~l~~ia~~l 55 (66)
T d2r1jl1 4 MGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKAL 55 (66)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 56678999999999999999999999999877765 4445555556666554
No 41
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=43.86 E-value=6.1 Score=31.84 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=27.8
Q ss_pred HHHHHHHhhhC-CcchhhhhhhhcCChhhhhhcc
Q 001260 222 TLILKKLIDRG-KVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 222 ~~~lkkli~~g-kv~~~~~a~~~g~s~~~~~a~l 254 (1113)
..||+-|.+.. -|++.++|.++|+|..++.--|
T Consensus 10 ~~Il~~L~~~~~~vs~~~La~~l~VS~~TI~rdi 43 (65)
T d1j5ya1 10 KSIVRILERSKEPVSGAQLAEELSVSRQVIVQDI 43 (65)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHCCCHHHHHHHH
Confidence 45788888765 4999999999999999988765
No 42
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=43.65 E-value=5.8 Score=31.82 Aligned_cols=33 Identities=21% Similarity=0.489 Sum_probs=29.3
Q ss_pred HHHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 222 TLILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 222 ~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
..||+-|-+.+..+..+||..+|+|+.++..-+
T Consensus 8 ~~IL~~L~~~~r~s~~eiA~~l~ls~~~v~~Ri 40 (63)
T d2cg4a1 8 RGILEALMGNARTAYAELAKQFGVSPETIHVRV 40 (63)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 458899999999999999999999999987664
No 43
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=43.49 E-value=5.9 Score=31.57 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=28.4
Q ss_pred HHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 223 LILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 223 ~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
-||+-|...|..++.+||.++|+|+.++..-+
T Consensus 7 kIl~~L~~n~r~s~~~lA~~~gls~~~v~~Ri 38 (60)
T d1i1ga1 7 IILEILEKDARTPFTEIAKKLGISETAVRKRV 38 (60)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 47778888999999999999999999987764
No 44
>d1weqa_ g.50.1.2 (A:) PHD finger protein 7 (NYD-SP6) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.38 E-value=10 Score=32.65 Aligned_cols=35 Identities=23% Similarity=0.649 Sum_probs=27.5
Q ss_pred CeEEccccCcc-cccccccCcccCCCccccccccccc
Q 001260 717 PILICSGCKVA-VHLDCYRNAKESTGPWYCELCEELL 752 (1113)
Q Consensus 717 ~IV~Cd~C~la-VHq~CYGi~~ipeg~WlCd~C~~~~ 752 (1113)
.|+.|..|+.. +|..|-.+. .....|.|..|....
T Consensus 45 ~ii~C~~CGS~gtH~~C~~l~-~~~~~y~C~~C~~v~ 80 (85)
T d1weqa_ 45 RLILCATCGSHGTHRDCSSLR-PNSKKWECNECLPAS 80 (85)
T ss_dssp BCEECSSSCCCEECSGGGTCC-TTCSCCCCTTTSCCS
T ss_pred EEEeecccCCccchhhhcCCc-CCCCCEECCcCcchh
Confidence 59999999965 999994433 345689999998753
No 45
>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.59 E-value=6.4 Score=30.51 Aligned_cols=29 Identities=24% Similarity=0.747 Sum_probs=23.5
Q ss_pred cCcccCCCCCCCCCeEEccccCcccccccccC
Q 001260 704 SCDICRRSETILNPILICSGCKVAVHLDCYRN 735 (1113)
Q Consensus 704 ~CsVC~~~E~~~N~IV~Cd~C~laVHq~CYGi 735 (1113)
.|.+|...=. +-+.|..|++.+|..|...
T Consensus 16 tC~~C~~~l~---qg~~C~~C~~~~Hk~C~~~ 44 (49)
T d1kbea_ 16 VCNVCQKSMI---FGVKCKHCRLKCHNKCTKE 44 (49)
T ss_dssp CCSSSCCSSC---CEEEETTTTEEESSSCTTT
T ss_pred Cchhhchhhh---CcCCcCCCCChHhHhhccc
Confidence 4999987422 4689999999999999753
No 46
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=41.13 E-value=8.2 Score=31.05 Aligned_cols=26 Identities=23% Similarity=0.482 Sum_probs=23.4
Q ss_pred hhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 229 IDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 229 i~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
-+.|.|.++|||..+|+|+-|+..++
T Consensus 17 ~~~~~v~~~~iA~~L~vs~~SVs~mi 42 (61)
T d2ev0a1 17 EEKGYARVSDIAEALAVHPSSVTKMV 42 (61)
T ss_dssp HHHSSCCHHHHHHHHTCCHHHHHHHH
T ss_pred hcCCCccHHHHHHHhCCCchhHHHHH
Confidence 36899999999999999999998774
No 47
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=40.94 E-value=16 Score=28.51 Aligned_cols=51 Identities=14% Similarity=0.085 Sum_probs=39.2
Q ss_pred hHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccccccccchhhHHHHHHh
Q 001260 221 FTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLADGTFASDLQCKLVKWL 271 (1113)
Q Consensus 221 ~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~~~~~~~~~~~k~~~wl 271 (1113)
|+.-||+|.+.-..+-+++|..+|||..+|-.-....+..++.-.+|-+-|
T Consensus 2 ig~rik~~R~~~g~sq~elA~~~gvs~~~is~~E~g~~~~~~~l~~ia~~l 52 (63)
T d1r69a_ 2 ISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASAL 52 (63)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTSCSSCTTHHHHHHHT
T ss_pred HHHHHHHHHHHcCCcHHHHHHHhCcCHHHHHHHHCCCCcCHHHHHHHHHHH
Confidence 566789999999999999999999999988777654344555555665554
No 48
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=40.87 E-value=2.4 Score=36.86 Aligned_cols=50 Identities=22% Similarity=0.541 Sum_probs=38.7
Q ss_pred CCCcCcccCCCC--C-CCCCeEEccccCcccccccccCcccCCCcccccccccc
Q 001260 701 HPRSCDICRRSE--T-ILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEEL 751 (1113)
Q Consensus 701 ~~~~CsVC~~~E--~-~~N~IV~Cd~C~laVHq~CYGi~~ipeg~WlCd~C~~~ 751 (1113)
+..+|.||.+.- + +++..|-|.-|++.|-+.||-- ...+|.-.|..|..-
T Consensus 15 ~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEY-ErkeG~q~CpqCkt~ 67 (93)
T d1weoa_ 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY-ERREGTQNCPQCKTR 67 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH-HHHTSCSSCTTTCCC
T ss_pred ccchhhhcccccccCCCCCEEEEecccCCccchHHHHH-HHhccCccCcccCCh
Confidence 357899999853 2 4678889999999999999952 244778889999764
No 49
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=40.78 E-value=8.1 Score=33.58 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=41.7
Q ss_pred cchHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccccccccchhhHHHH
Q 001260 219 LNFTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLADGTFASDLQCKLV 268 (1113)
Q Consensus 219 ~~~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~~~~~~~~~~~k~~ 268 (1113)
.+-|.-.++|+|-| .+..+||..+|.|...|...|.-..+.|.+|-.|.
T Consensus 6 iEeA~a~~~L~e~g-~t~~~iA~~~Gks~~~V~~~LrLl~L~~~v~~~l~ 54 (93)
T d1vz0a1 6 VEEARGYQALLEMG-LTQEEVARRVGKARSTVANALRLLQLPPEALEALE 54 (93)
T ss_dssp HHHHHHHHHHHHTT-CCHHHHHHHHTCCHHHHHHHHHGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 44577899999977 69999999999999999999887788888776653
No 50
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=40.60 E-value=6.9 Score=31.42 Aligned_cols=33 Identities=15% Similarity=0.400 Sum_probs=28.9
Q ss_pred HHHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 222 TLILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 222 ~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
.-||..|-.-|..+..+||.++|+|+.++..-+
T Consensus 8 ~~IL~~L~~n~r~s~~~iA~~lgis~~tv~~Ri 40 (63)
T d2cfxa1 8 LNIIEELKKDSRLSMRELGRKIKLSPPSVTERV 40 (63)
T ss_dssp HHHHHHHHHCSCCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 357888888999999999999999999987764
No 51
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=39.35 E-value=8.6 Score=31.19 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=31.2
Q ss_pred chHHHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 220 NFTLILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 220 ~~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
|...||+-|...|.++..|||..+|+|+-++..-|
T Consensus 7 N~~~Il~~l~~~g~~sr~eLa~~~glS~~Tv~~~l 41 (71)
T d1z05a1 7 NAGRVYKLIDQKGPISRIDLSKESELAPASITKIT 41 (71)
T ss_dssp HHHHHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcCHHHHHHHHCCCHHHHHHHH
Confidence 45788999999999999999999999999987764
No 52
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=38.70 E-value=7.8 Score=30.67 Aligned_cols=32 Identities=22% Similarity=0.438 Sum_probs=28.5
Q ss_pred HHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 223 LILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 223 ~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
-+|+-|-+-+..++.+||..+|+|+.++..-+
T Consensus 7 ~Il~~L~~n~r~s~~eiA~~l~ls~~~v~~Ri 38 (60)
T d2cyya1 7 KIIKILQNDGKAPLREISKITGLAESTIHERI 38 (60)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHCSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 57888888999999999999999999987764
No 53
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=38.64 E-value=17 Score=29.22 Aligned_cols=56 Identities=7% Similarity=0.161 Sum_probs=44.8
Q ss_pred chHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccc--cccccchhhHHHHHHhhhcc
Q 001260 220 NFTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLA--DGTFASDLQCKLVKWLSNHA 275 (1113)
Q Consensus 220 ~~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~--~~~~~~~~~~k~~~wl~~~~ 275 (1113)
+++..+++++++...+.+++|..+||++..|-.-.. ..+++.+.-.+|..-|.=++
T Consensus 6 ~l~~~i~~~r~~~gltq~elA~~~gv~~~~is~ie~g~~~~~s~~~L~~ia~~Lg~~i 63 (69)
T d2a6ca1 6 QLLIVLQEHLRNSGLTQFKAAELLGVTQPRVSDLMRGKIDLFSLESLIDMITSIGLKV 63 (69)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHTSCHHHHHHHHTTCGGGCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHcCHhHHHHHHcccccchhHHHHHHHHHHhCCCc
Confidence 578889999999999999999999999999877765 35567777677766665443
No 54
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.37 E-value=6.5 Score=32.62 Aligned_cols=46 Identities=28% Similarity=0.708 Sum_probs=30.2
Q ss_pred ccccccCc-CCceeecCCCCcc-cccchhhhhhcCceEEEeeCCCceeeeecCCCCCh
Q 001260 826 VCCICRHK-HGICIKCNYGNCQ-TTFHPTCARSAGFYLNVKSTGGNFQHKAYCEKHSL 881 (1113)
Q Consensus 826 ~C~iC~~~-~GA~IqCs~~~C~-~~FHvtCA~~aG~~~~~k~~~g~~~~~iyC~kHs~ 881 (1113)
.+++|++. .+.+|.|....|. .+||..|. |+.. ...+.+ ||+.=..
T Consensus 17 ~~CiC~~~~~~~~i~c~~~~C~~~wfH~~Cv---gl~~---~p~~~w----~C~~C~~ 64 (71)
T d1wesa_ 17 TYCLCNQVSYGEMIGCDNEQCPIEWFHFSCV---SLTY---KPKGKW----YCPKCRG 64 (71)
T ss_dssp CCSTTCCCCCSSEECCSCTTCSCCCEETTTT---TCSS---CCSSCC----CCTTTSS
T ss_pred CEEEeCCCCCCCEEEEECCCCCCcCccCccC---CCCc---CCCCcE----ECcCCcc
Confidence 34499986 4677888766785 69999997 3322 223344 8887654
No 55
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=37.02 E-value=10 Score=30.60 Aligned_cols=30 Identities=37% Similarity=0.458 Sum_probs=24.3
Q ss_pred HHHHHhhhCCcchhhhhhhhcCChhhhhhccc
Q 001260 224 ILKKLIDRGKVNVKDIASDIGISPDLLKTTLA 255 (1113)
Q Consensus 224 ~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~ 255 (1113)
||+ |+-+|+ +.++||.++|||+.+|+.-+.
T Consensus 14 vl~-ll~~G~-s~~eIA~~l~iS~~TV~~~~~ 43 (67)
T d1a04a1 14 ILK-LIAQGL-PNKMIARRLDITESTVKVHVK 43 (67)
T ss_dssp HHH-HHHTTC-CHHHHHHHHTCCHHHHHHHHH
T ss_pred HHH-HHHhCC-CHHHHHHHHCCCHHHHHHHHH
Confidence 444 555786 889999999999999988764
No 56
>d1s6la1 a.4.5.79 (A:21-80) Alkylmercury lyase MerB {Escherichia coli [TaxId: 562]}
Probab=36.71 E-value=7.8 Score=31.38 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=30.9
Q ss_pred HHHHHHHhhhCCcchhhhhhhhcCChhhhhhccc
Q 001260 222 TLILKKLIDRGKVNVKDIASDIGISPDLLKTTLA 255 (1113)
Q Consensus 222 ~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~ 255 (1113)
-++||.|-+=.-|++.++|.++|-+.|-++++|.
T Consensus 5 v~LLr~LA~G~PVs~~~LA~alg~~~~eV~~aL~ 38 (60)
T d1s6la1 5 VPLLRELAKGRPVSRTTLAGILDWPAERVAAVLE 38 (60)
T ss_dssp CHHHHHHHTTCCBCHHHHHHHHTCCHHHHHHHHT
T ss_pred HHHHHHHhCCCCcCHHHHHHHhCCCHHHHHHHHH
Confidence 4678888888889999999999999999999985
No 57
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=35.87 E-value=19 Score=29.33 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=39.7
Q ss_pred hHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHh
Q 001260 221 FTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWL 271 (1113)
Q Consensus 221 ~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl 271 (1113)
|+.-||+|......+.+++|..+|||+..|-.-.. ......+.-.+|-+-|
T Consensus 9 ig~~lr~~R~~~g~sq~~lA~~~gis~~~i~~~E~g~~~p~~~~l~~ia~~l 60 (79)
T d1y9qa1 9 IANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGL 60 (79)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHTTCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcchhHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 56789999999999999999999999999887765 3344555555665555
No 58
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=34.19 E-value=21 Score=28.48 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=39.2
Q ss_pred cchHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHh
Q 001260 219 LNFTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWL 271 (1113)
Q Consensus 219 ~~~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl 271 (1113)
..|+--||+|..+..++.+++|..+|||+.++..--. ....+.+.-.+|.+-|
T Consensus 8 ~~~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~E~g~~~p~~~~l~~ia~~l 61 (69)
T d1y7ya1 8 VKFGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATAL 61 (69)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHhHhCCCHHHHHHHHCCCCCCCHHHHHHHHHHh
Confidence 4567789999999999999999999999988766543 3344444455555544
No 59
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=32.97 E-value=11 Score=32.03 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=23.7
Q ss_pred Ccch-HHHHHHHhhhCCcchhhhhhhhcCChhhhh
Q 001260 218 ALNF-TLILKKLIDRGKVNVKDIASDIGISPDLLK 251 (1113)
Q Consensus 218 ~~~~-~~~lkkli~~gkv~~~~~a~~~g~s~~~~~ 251 (1113)
+.+| .-+++..++.+-.++.+||.++|||+.+|-
T Consensus 7 s~EfK~~aV~l~~~~~g~s~~~vA~~lGIs~~tl~ 41 (89)
T d2jn6a1 7 SEEFKRDAVALYENSDGASLQQIANDLGINRVTLK 41 (89)
T ss_dssp CHHHHHHHHHHHTTGGGSCHHHHHHHHTSCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCcHHHHHHHHCCCHHHHH
Confidence 3444 344544444556899999999999998764
No 60
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.59 E-value=11 Score=30.11 Aligned_cols=32 Identities=9% Similarity=0.214 Sum_probs=28.2
Q ss_pred HHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 223 LILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 223 ~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
-||.-|-+.+.+|..++|.++|+|.-++..-+
T Consensus 9 ~iL~~L~~~~~~s~~eLa~~l~vS~~ti~r~i 40 (63)
T d1biaa1 9 KLIALLANGEFHSGEQLGETLGMSRAAINKHI 40 (63)
T ss_dssp HHHHHHTTSSCBCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHCCcCCHHHHHHHHCcCHHHHHHHH
Confidence 47788888889999999999999999988765
No 61
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.24 E-value=10 Score=32.59 Aligned_cols=35 Identities=26% Similarity=0.702 Sum_probs=29.2
Q ss_pred cccccccCcC-CceeecCCCCcccccchhhhhhcCceE
Q 001260 825 DVCCICRHKH-GICIKCNYGNCQTTFHPTCARSAGFYL 861 (1113)
Q Consensus 825 ~~C~iC~~~~-GA~IqCs~~~C~~~FHvtCA~~aG~~~ 861 (1113)
..|.||+... -..+.|. -|.+.||-.|-++-|+.-
T Consensus 16 ~mC~vC~v~t~~~l~pCR--vCtRv~H~~CL~r~gyl~ 51 (89)
T d1wila_ 16 EMCDVCEVWTAESLFPCR--VCTRVFHDGCLRRMGYIQ 51 (89)
T ss_dssp CCCTTTCCCCSSCCSSCS--SSSSCCCHHHHHHHTSCC
T ss_pred ccccccCcccccceecce--eecchhhHHHHHHhcccc
Confidence 5799998764 4566899 899999999999998755
No 62
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=29.38 E-value=11 Score=30.64 Aligned_cols=30 Identities=30% Similarity=0.357 Sum_probs=23.9
Q ss_pred HHHHHhhhCCcchhhhhhhhcCChhhhhhccc
Q 001260 224 ILKKLIDRGKVNVKDIASDIGISPDLLKTTLA 255 (1113)
Q Consensus 224 ~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~ 255 (1113)
||+- |-+|+ +.++||.++|||+.+|+.-+.
T Consensus 20 vl~~-l~~G~-s~~eIA~~l~iS~~TV~~~~~ 49 (70)
T d1yioa1 20 VLQL-TIRGL-MNKQIAGELGIAEVTVKVHRH 49 (70)
T ss_dssp HHHH-HTTTC-CHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHH-HHcCC-CHHHHHHHHCCCHHHHHHHHH
Confidence 4444 44787 889999999999999988754
No 63
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.88 E-value=14 Score=31.90 Aligned_cols=31 Identities=23% Similarity=0.604 Sum_probs=26.0
Q ss_pred cccccccCc-CCceeecCCCCcccccchhhhhhc
Q 001260 825 DVCCICRHK-HGICIKCNYGNCQTTFHPTCARSA 857 (1113)
Q Consensus 825 ~~C~iC~~~-~GA~IqCs~~~C~~~FHvtCA~~a 857 (1113)
..|..|+.. .|....|. .|...+|+.||...
T Consensus 48 ~~C~~C~~~~~g~~Y~C~--~C~f~LH~~CA~~P 79 (89)
T d1v5na_ 48 YTCDKCEEEGTIWSYHCD--ECDFDLHAKCALNE 79 (89)
T ss_dssp CCCTTTSCCCCSCEEECT--TTCCCCCHHHHHCS
T ss_pred CEeCCCCCCcCCcEeEec--cCCCEecHHHcCCC
Confidence 579999986 46667898 89999999999754
No 64
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.00 E-value=15 Score=31.76 Aligned_cols=33 Identities=21% Similarity=0.526 Sum_probs=27.0
Q ss_pred cccccccccc-cCceeeCCCCCCCcccchhhhhhcC
Q 001260 56 KLVCNICRVK-CGACVRCSHGTCRTSFHPICAREAR 90 (1113)
Q Consensus 56 ~LkC~iC~~k-~GAcIqCs~~~C~~sFHvtCA~~aG 90 (1113)
...|..|+.. .|....|. .|.-.+|+.||...-
T Consensus 47 ~~~C~~C~~~~~g~~Y~C~--~C~f~LH~~CA~~P~ 80 (89)
T d1v5na_ 47 VYTCDKCEEEGTIWSYHCD--ECDFDLHAKCALNED 80 (89)
T ss_dssp SCCCTTTSCCCCSCEEECT--TTCCCCCHHHHHCSS
T ss_pred CCEeCCCCCCcCCcEeEec--cCCCEecHHHcCCCc
Confidence 3579999976 57788997 799999999997543
No 65
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=26.56 E-value=13 Score=31.60 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=28.5
Q ss_pred HHHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 222 TLILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 222 ~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
--||.-|-..|.+++.|||..+||++-+|...|
T Consensus 19 ~~IL~~L~~~~~~~~~eLa~~l~is~~~vs~~l 51 (100)
T d1ub9a_ 19 LGIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHI 51 (100)
T ss_dssp HHHHHHHHHHSEEEHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHhccCCCeeHHHHHHHHhhccccccHHH
Confidence 447888888999999999999999999887654
No 66
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=26.06 E-value=28 Score=27.46 Aligned_cols=48 Identities=17% Similarity=0.236 Sum_probs=35.9
Q ss_pred HHHHhhhCCcchhhhhhhhcCChhhhhhccc-cccccchhhHHHHHHhh
Q 001260 225 LKKLIDRGKVNVKDIASDIGISPDLLKTTLA-DGTFASDLQCKLVKWLS 272 (1113)
Q Consensus 225 lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~-~~~~~~~~~~k~~~wl~ 272 (1113)
||+|......+.+++|..+|||.-++-.-.. ....+.+.-.+|.+-|.
T Consensus 6 i~~lR~~~g~tq~elA~~~gis~~~is~~e~g~~~p~~~~l~~ia~~l~ 54 (66)
T d1utxa_ 6 LKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLN 54 (66)
T ss_dssp HHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTSCCCCHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCHHHHHHhcccCHHHHHHHHcCCCCCCHHHHHHHHHHHC
Confidence 5677778889999999999999998876654 44445555567776663
No 67
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.20 E-value=21 Score=28.77 Aligned_cols=25 Identities=16% Similarity=0.044 Sum_probs=22.4
Q ss_pred hhCCcchhhhhhhhcCChhhhhhcc
Q 001260 230 DRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 230 ~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
+.|.|.+.|||..+|+||-|+..++
T Consensus 20 ~~~~v~~~~iA~~L~vs~~SVt~mv 44 (63)
T d2isya1 20 EGVTPLRARIAERLDQSGPTVSQTV 44 (63)
T ss_dssp TTCCCCHHHHHHHHTCCHHHHHHHH
T ss_pred cCCCCcHHHHHHHhCCCchhHHHHH
Confidence 3688999999999999999998774
No 68
>d1u2wa1 a.4.5.5 (A:12-119) Cadmium efflux system accessory protein CadC {Staphylococcus aureus [TaxId: 1280]}
Probab=24.79 E-value=16 Score=32.12 Aligned_cols=33 Identities=24% Similarity=0.222 Sum_probs=27.6
Q ss_pred HHHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 222 TLILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 222 ~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
-.||+-|.+.|..+|.+||.++|+|.-++---|
T Consensus 34 l~Il~~L~~~~~~~v~ela~~l~~s~s~vS~HL 66 (108)
T d1u2wa1 34 AKITYALCQDEELCVCDIANILGVTIANASHHL 66 (108)
T ss_dssp HHHHHHHHHSSCEEHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCccHHHHHHHHccChhHHHHHH
Confidence 357788888899999999999999998875443
No 69
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.40 E-value=17 Score=29.38 Aligned_cols=36 Identities=14% Similarity=0.205 Sum_probs=31.9
Q ss_pred chHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccc
Q 001260 220 NFTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLA 255 (1113)
Q Consensus 220 ~~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~ 255 (1113)
|...||+-|-..|.++-.|||..+|+|+-++...+.
T Consensus 6 N~~~Il~~i~~~g~~sr~eLa~~~gLS~~Tvs~iv~ 41 (70)
T d1z6ra1 6 NAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVH 41 (70)
T ss_dssp HHHHHHHHHHSSCSCCHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcCHHHHHHHHCcCHHHHHHHHH
Confidence 567889999999999999999999999999887753
No 70
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=22.68 E-value=50 Score=25.72 Aligned_cols=35 Identities=20% Similarity=0.180 Sum_probs=30.4
Q ss_pred hHHHHHHHhhhCCcchhhhhhhhcCChhhhhhccc
Q 001260 221 FTLILKKLIDRGKVNVKDIASDIGISPDLLKTTLA 255 (1113)
Q Consensus 221 ~~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l~ 255 (1113)
|+.-||.+.++-..+.+++|..+|||+.++-.-..
T Consensus 4 i~~rlr~~R~~~gltq~~lA~~~gvs~~ti~~~E~ 38 (65)
T d2croa_ 4 LSERLKKRRIALKMTQTELATKAGVKQQSIQLIEA 38 (65)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHhHHHHHHC
Confidence 67778899888899999999999999998877654
No 71
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=22.12 E-value=23 Score=30.67 Aligned_cols=33 Identities=27% Similarity=0.553 Sum_probs=30.0
Q ss_pred HHHHHHHhhhCCcchhhhhhhhcCChhhhhhcc
Q 001260 222 TLILKKLIDRGKVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 222 ~~~lkkli~~gkv~~~~~a~~~g~s~~~~~a~l 254 (1113)
+.|+.-|...|..++++||..+||+.-++...|
T Consensus 23 ~~v~~~L~~~g~~t~~eia~~~~i~~~~v~~~l 55 (109)
T d1sfxa_ 23 VRIYSLLLERGGMRVSEIARELDLSARFVRDRL 55 (109)
T ss_dssp HHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHhCCCcchHHHHH
Confidence 677888889999999999999999999998876
No 72
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.09 E-value=18 Score=31.52 Aligned_cols=50 Identities=22% Similarity=0.400 Sum_probs=28.8
Q ss_pred CCcCcccCCCC--C------------CCCCeEEccccCcccccccccCc---ccCCCcccccccccc
Q 001260 702 PRSCDICRRSE--T------------ILNPILICSGCKVAVHLDCYRNA---KESTGPWYCELCEEL 751 (1113)
Q Consensus 702 ~~~CsVC~~~E--~------------~~N~IV~Cd~C~laVHq~CYGi~---~ipeg~WlCd~C~~~ 751 (1113)
+..|.||++.- . ..+..+.--.|+-.||..|.-.- ....+.-.|..|+..
T Consensus 25 ~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~ 91 (114)
T d1v87a_ 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTI 91 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCB
T ss_pred cccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccch
Confidence 34699998631 0 01234455679999999996310 011234457777654
No 73
>d1q1ha_ a.4.5.41 (A:) Transcription factor E/IIe-alpha, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=21.57 E-value=27 Score=30.17 Aligned_cols=35 Identities=23% Similarity=0.488 Sum_probs=30.5
Q ss_pred chHHHHHHHhhhC-CcchhhhhhhhcCChhhhhhcc
Q 001260 220 NFTLILKKLIDRG-KVNVKDIASDIGISPDLLKTTL 254 (1113)
Q Consensus 220 ~~~~~lkkli~~g-kv~~~~~a~~~g~s~~~~~a~l 254 (1113)
|.-.|++.|+++| .|+-.+||..+||..-.+.-+|
T Consensus 19 ~~~~v~~~L~~~~~evtDe~iA~~tgi~in~VRk~L 54 (88)
T d1q1ha_ 19 DVIDVLRILLDKGTEMTDEEIANQLNIKVNDVRKKL 54 (88)
T ss_dssp TTHHHHHHHHHHCSCBCHHHHHHTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHhccCcCCHHHHHHHhCCcHHHHHHHH
Confidence 3467899999885 6999999999999999998886
No 74
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.87 E-value=19 Score=27.11 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=23.4
Q ss_pred hhcccccccccccc-cCceeeCCCCCCCcccchhh
Q 001260 52 ETRMKLVCNICRVK-CGACVRCSHGTCRTSFHPIC 85 (1113)
Q Consensus 52 ~~R~~LkC~iC~~k-~GAcIqCs~~~C~~sFHvtC 85 (1113)
.+++..+|..|.+- .|--+..- ...||+.|
T Consensus 11 q~~fG~~C~~C~~~ItG~V~~Ag----~~~yHP~C 41 (41)
T d1v6ga1 11 QRLYGTRCFSCDQFIEGEVVSAL----GKTYHPDC 41 (41)
T ss_dssp GGSCCCBCTTTCCBCCSCCEEET----TEEECTTT
T ss_pred HHHhCcccccccCEeeeeeeEec----CcccCCCC
Confidence 35677899999975 57777776 46899998
Done!