Query 001263
Match_columns 1112
No_of_seqs 792 out of 2876
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 19:12:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001263.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001263hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w5y_A Histone-lysine N-methyl 100.0 8.1E-36 2.8E-40 312.6 15.9 156 931-1088 35-192 (192)
2 3h6l_A Histone-lysine N-methyl 100.0 4E-35 1.4E-39 324.0 14.4 158 934-1092 103-261 (278)
3 3ooi_A Histone-lysine N-methyl 100.0 7.4E-35 2.5E-39 315.2 14.7 154 934-1088 78-232 (232)
4 3ope_A Probable histone-lysine 100.0 3.7E-34 1.3E-38 308.0 17.3 158 933-1092 58-218 (222)
5 3bo5_A Histone-lysine N-methyl 100.0 2.2E-32 7.5E-37 304.7 15.5 155 933-1090 111-288 (290)
6 1mvh_A Cryptic LOCI regulator 100.0 3.7E-32 1.3E-36 304.1 11.9 153 934-1089 123-299 (299)
7 2r3a_A Histone-lysine N-methyl 100.0 4.3E-32 1.5E-36 303.1 12.0 152 934-1088 126-300 (300)
8 1ml9_A Histone H3 methyltransf 100.0 3.8E-32 1.3E-36 305.2 11.3 152 935-1087 120-301 (302)
9 3hna_A Histone-lysine N-methyl 100.0 1.2E-31 4.2E-36 298.0 8.2 143 935-1086 134-287 (287)
10 2wzo_A Transforming growth fac 100.0 2.6E-29 8.9E-34 252.2 10.2 141 475-627 2-144 (146)
11 3f9x_A Histone-lysine N-methyl 100.0 9.2E-29 3.2E-33 254.6 14.3 134 936-1070 18-155 (166)
12 2qpw_A PR domain zinc finger p 99.9 1.1E-24 3.9E-29 219.0 9.4 124 931-1070 12-146 (149)
13 2f69_A Histone-lysine N-methyl 99.9 2.7E-24 9.3E-29 235.7 13.2 118 947-1071 108-236 (261)
14 1n3j_A A612L, histone H3 lysin 99.9 7.5E-25 2.6E-29 213.0 6.0 110 946-1071 2-111 (119)
15 1h3i_A Histone H3 lysine 4 spe 99.9 1.4E-23 4.9E-28 235.3 12.6 118 947-1071 162-290 (293)
16 3s8p_A Histone-lysine N-methyl 99.9 3.4E-24 1.2E-28 233.6 4.3 133 948-1088 131-269 (273)
17 2daq_A WHSC1L1 protein, isofor 99.8 6.6E-22 2.3E-26 189.3 6.9 101 328-429 3-104 (110)
18 3qby_A Hepatoma-derived growth 99.8 1E-21 3.5E-26 181.9 6.5 85 331-422 3-87 (94)
19 4fu6_A PC4 and SFRS1-interacti 99.8 1.2E-21 4E-26 198.4 4.8 87 331-424 20-106 (153)
20 1ri0_A Hepatoma-derived growth 99.8 8.5E-21 2.9E-25 180.7 7.2 87 329-422 15-101 (110)
21 2l89_A PWWP domain-containing 99.8 3.1E-21 1.1E-25 183.4 3.5 96 330-426 2-99 (108)
22 3rq4_A Histone-lysine N-methyl 99.8 8.5E-21 2.9E-25 205.1 6.3 127 948-1085 103-235 (247)
23 2gfu_A DNA mismatch repair pro 99.8 1.6E-20 5.3E-25 185.9 7.4 107 329-437 18-129 (134)
24 3llr_A DNA (cytosine-5)-methyl 99.8 1.7E-20 5.8E-25 187.5 7.6 95 326-426 9-105 (154)
25 1h3z_A Hypothetical 62.8 kDa p 99.8 7.3E-20 2.5E-24 174.7 4.9 95 331-426 4-102 (109)
26 1khc_A DNA cytosine-5 methyltr 99.8 1.5E-19 5.2E-24 180.5 7.0 95 327-427 5-101 (147)
27 3ep0_A PR domain zinc finger p 99.7 7.5E-18 2.6E-22 172.4 10.3 113 945-1070 24-148 (170)
28 3pfs_A Bromodomain and PHD fin 99.7 9.2E-18 3.1E-22 166.7 5.4 96 329-424 32-149 (158)
29 3dal_A PR domain zinc finger p 99.7 9.9E-18 3.4E-22 174.8 5.8 127 943-1087 53-190 (196)
30 3db5_A PR domain zinc finger p 99.7 1.1E-16 3.7E-21 161.6 9.0 117 943-1070 18-144 (151)
31 3l42_A Peregrin; transcription 99.6 1.3E-16 4.4E-21 153.5 7.5 94 332-425 4-123 (130)
32 3ray_A PR domain-containing pr 99.5 6.1E-15 2.1E-19 156.8 5.2 132 943-1092 67-208 (237)
33 2lq6_A Bromodomain-containing 99.4 3.3E-14 1.1E-18 129.4 4.2 77 752-833 9-86 (87)
34 3ihx_A PR domain zinc finger p 99.4 2.4E-13 8.2E-18 136.9 5.4 107 943-1068 18-141 (152)
35 2ku3_A Bromodomain-containing 98.9 4.5E-10 1.5E-14 98.1 2.8 53 645-698 13-65 (71)
36 2l43_A N-teminal domain from h 98.8 1.8E-09 6.3E-14 98.4 2.6 55 645-700 22-76 (88)
37 2yt5_A Metal-response element- 98.6 2E-08 7E-13 86.6 3.3 54 646-700 4-62 (66)
38 1wev_A Riken cDNA 1110020M19; 98.5 5.4E-08 1.9E-12 88.8 3.0 53 646-699 14-72 (88)
39 4gne_A Histone-lysine N-methyl 98.4 2.8E-07 9.6E-12 86.7 6.5 74 646-725 13-96 (107)
40 3n71_A Histone lysine methyltr 98.4 1.5E-07 5.1E-12 112.6 5.3 61 1022-1086 200-282 (490)
41 3qwp_A SET and MYND domain-con 98.4 7.9E-08 2.7E-12 113.2 2.4 62 1021-1086 200-270 (429)
42 1f62_A Transcription factor WS 98.3 2.6E-07 8.8E-12 75.5 3.2 46 650-698 2-49 (51)
43 3qww_A SET and MYND domain-con 98.3 4.1E-07 1.4E-11 107.1 4.7 53 1022-1078 201-264 (433)
44 1mm2_A MI2-beta; PHD, zinc fin 98.2 8.5E-07 2.9E-11 75.2 4.2 48 646-699 7-56 (61)
45 2e6r_A Jumonji/ARID domain-con 98.2 7.8E-07 2.7E-11 81.8 3.9 50 646-698 14-65 (92)
46 1xwh_A Autoimmune regulator; P 98.2 5.7E-07 2E-11 77.5 2.7 49 646-700 6-56 (66)
47 2yql_A PHD finger protein 21A; 98.2 8.5E-07 2.9E-11 73.9 3.1 47 646-698 7-55 (56)
48 2kwj_A Zinc finger protein DPF 98.1 8.7E-07 3E-11 84.9 3.0 55 649-712 2-66 (114)
49 3v43_A Histone acetyltransfera 98.1 9.9E-07 3.4E-11 84.3 3.0 49 648-697 5-62 (112)
50 2lri_C Autoimmune regulator; Z 98.1 1.3E-06 4.4E-11 75.1 3.3 47 648-700 12-60 (66)
51 2ysm_A Myeloid/lymphoid or mix 98.1 2.7E-06 9.1E-11 81.1 5.7 77 646-732 5-85 (111)
52 2puy_A PHD finger protein 21A; 98.1 1.4E-06 4.7E-11 73.7 3.0 46 647-698 4-51 (60)
53 2e6s_A E3 ubiquitin-protein li 98.1 2.3E-06 8E-11 75.8 4.2 49 648-698 26-76 (77)
54 1fp0_A KAP-1 corepressor; PHD 98.1 2.4E-06 8.4E-11 77.2 4.4 48 646-699 23-72 (88)
55 2l5u_A Chromodomain-helicase-D 98.1 1.9E-06 6.5E-11 73.0 3.3 47 646-698 9-57 (61)
56 3asl_A E3 ubiquitin-protein li 98.0 2.6E-06 8.7E-11 74.3 4.1 47 650-698 20-68 (70)
57 3shb_A E3 ubiquitin-protein li 98.0 3.8E-06 1.3E-10 74.4 3.7 47 650-698 28-76 (77)
58 1wen_A Inhibitor of growth fam 97.9 1.1E-05 3.7E-10 70.5 5.7 50 646-700 14-66 (71)
59 1weu_A Inhibitor of growth fam 97.8 2.4E-05 8.1E-10 71.4 5.3 50 646-700 34-86 (91)
60 2vnf_A ING 4, P29ING4, inhibit 97.7 9.7E-06 3.3E-10 68.4 2.0 46 648-698 10-58 (60)
61 3c6w_A P28ING5, inhibitor of g 97.7 1E-05 3.5E-10 68.0 2.1 47 647-698 8-57 (59)
62 2k16_A Transcription initiatio 97.7 1.3E-05 4.4E-10 70.8 2.5 51 647-699 17-68 (75)
63 2g6q_A Inhibitor of growth pro 97.7 1.5E-05 5E-10 67.7 2.2 48 647-699 10-60 (62)
64 2lv9_A Histone-lysine N-methyl 97.6 3.9E-05 1.3E-09 71.3 4.8 48 649-699 29-76 (98)
65 3o36_A Transcription intermedi 97.6 3.1E-05 1.1E-09 80.5 4.3 48 647-700 3-52 (184)
66 3u5n_A E3 ubiquitin-protein li 97.6 3.6E-05 1.2E-09 81.5 4.9 49 646-700 5-55 (207)
67 2jmi_A Protein YNG1, ING1 homo 97.6 2.2E-05 7.6E-10 71.4 2.7 47 647-698 25-75 (90)
68 3o70_A PHD finger protein 13; 97.6 3.7E-05 1.3E-09 66.5 3.8 50 647-699 18-67 (68)
69 3ask_A E3 ubiquitin-protein li 97.6 2.9E-05 9.9E-10 82.1 3.7 48 649-698 175-224 (226)
70 2ro1_A Transcription intermedi 97.5 4.6E-05 1.6E-09 79.4 3.2 46 648-699 2-49 (189)
71 2kwj_A Zinc finger protein DPF 97.5 4.4E-05 1.5E-09 73.0 2.8 47 649-698 59-107 (114)
72 3v43_A Histone acetyltransfera 97.3 0.00011 3.9E-09 69.9 3.8 48 649-698 62-111 (112)
73 2ysm_A Myeloid/lymphoid or mix 97.3 0.00012 4.1E-09 69.6 3.4 46 650-698 56-103 (111)
74 2l8d_A Lamin-B receptor; DNA b 97.2 0.00047 1.6E-08 57.4 6.0 45 241-285 11-55 (66)
75 2dig_A Lamin-B receptor; tudor 97.2 0.00058 2E-08 57.0 6.1 44 242-285 15-58 (68)
76 1we9_A PHD finger family prote 97.1 0.00032 1.1E-08 59.9 3.8 53 646-699 4-58 (64)
77 1wew_A DNA-binding family prot 97.0 0.00034 1.2E-08 62.1 3.1 50 648-700 16-73 (78)
78 2rsd_A E3 SUMO-protein ligase 96.9 0.00038 1.3E-08 60.2 2.9 47 649-698 11-64 (68)
79 3o7a_A PHD finger protein 13 v 96.9 0.0004 1.4E-08 56.7 2.8 47 650-698 5-51 (52)
80 1x4i_A Inhibitor of growth pro 96.9 0.00027 9.1E-09 61.5 1.5 45 649-698 7-54 (70)
81 2equ_A PHD finger protein 20-l 96.8 0.0015 5E-08 57.3 5.7 45 240-286 10-54 (74)
82 1wee_A PHD finger family prote 96.8 0.00087 3E-08 58.6 4.1 50 648-699 16-66 (72)
83 2g3r_A Tumor suppressor P53-bi 96.8 0.0012 4.2E-08 61.9 5.2 106 238-395 3-108 (123)
84 3p8d_A Medulloblastoma antigen 96.7 0.0025 8.5E-08 54.5 6.3 47 238-286 5-51 (67)
85 1wem_A Death associated transc 96.7 0.00044 1.5E-08 61.1 1.5 49 649-700 17-71 (76)
86 1mhn_A SurviVal motor neuron p 96.7 0.0024 8.3E-08 53.5 5.9 45 242-286 6-51 (59)
87 1wep_A PHF8; structural genomi 96.7 0.00066 2.3E-08 60.4 2.6 50 649-700 13-64 (79)
88 2kgg_A Histone demethylase jar 96.6 0.00058 2E-08 55.8 1.5 47 650-697 4-52 (52)
89 4a4f_A SurviVal of motor neuro 96.6 0.0031 1.1E-07 53.7 5.9 46 241-286 10-56 (64)
90 3qii_A PHD finger protein 20; 96.5 0.0035 1.2E-07 55.8 6.1 47 238-286 20-66 (85)
91 3pmi_A PWWP domain-containing 96.5 0.00097 3.3E-08 62.8 2.6 75 332-418 3-82 (134)
92 2vpb_A Hpygo1, pygopus homolog 96.5 0.00051 1.7E-08 58.8 0.5 49 647-697 7-64 (65)
93 3s6w_A Tudor domain-containing 96.5 0.0036 1.2E-07 51.4 5.4 45 242-286 4-49 (54)
94 1g5v_A SurviVal motor neuron p 96.4 0.0053 1.8E-07 55.6 6.3 46 241-286 12-58 (88)
95 2xb1_A Pygopus homolog 2, B-ce 96.3 0.0013 4.5E-08 61.8 2.0 50 649-700 4-62 (105)
96 2ldm_A Uncharacterized protein 95.2 0.00077 2.6E-08 59.8 0.0 43 242-286 9-51 (81)
97 3kqi_A GRC5, PHD finger protei 96.0 0.0015 5.2E-08 57.5 1.1 49 649-698 10-60 (75)
98 2ri7_A Nucleosome-remodeling f 96.0 0.00089 3E-08 68.7 -0.8 51 647-699 7-59 (174)
99 3qxy_A N-lysine methyltransfer 95.6 0.0069 2.4E-07 71.4 4.7 44 1021-1068 221-264 (449)
100 2eqj_A Metal-response element- 95.6 0.017 5.8E-07 48.7 5.6 43 242-285 16-58 (66)
101 1ssf_A Transformation related 95.6 0.011 3.9E-07 57.8 5.3 107 238-396 7-113 (156)
102 2lbm_A Transcriptional regulat 95.5 0.0044 1.5E-07 61.0 2.0 46 647-698 62-116 (142)
103 3lqh_A Histone-lysine N-methyl 95.5 0.0037 1.3E-07 64.4 1.5 52 649-700 3-64 (183)
104 2d9t_A Tudor domain-containing 95.5 0.019 6.3E-07 50.9 5.8 47 240-286 10-57 (78)
105 3pnw_C Tudor domain-containing 95.4 0.019 6.6E-07 50.7 5.8 46 241-286 19-65 (77)
106 2h21_A Ribulose-1,5 bisphospha 95.1 0.0083 2.8E-07 70.5 2.9 47 1022-1068 189-242 (440)
107 3h8z_A FragIle X mental retard 94.9 0.073 2.5E-06 51.4 8.4 108 243-399 5-120 (128)
108 3ql9_A Transcriptional regulat 94.2 0.012 4.2E-07 56.9 1.2 47 647-698 56-110 (129)
109 3pur_A Lysine-specific demethy 93.8 0.026 9E-07 66.4 3.2 37 662-698 55-93 (528)
110 3smt_A Histone-lysine N-methyl 93.8 0.032 1.1E-06 66.5 4.0 43 1022-1067 272-314 (497)
111 3qii_A PHD finger protein 20; 93.4 0.061 2.1E-06 48.0 4.0 56 331-399 19-74 (85)
112 4hcz_A PHD finger protein 1; p 93.3 0.17 5.7E-06 41.5 6.0 44 242-286 6-49 (58)
113 3p8d_A Medulloblastoma antigen 93.1 0.079 2.7E-06 45.3 4.1 57 330-399 3-59 (67)
114 2yrv_A AT-rich interactive dom 92.9 0.19 6.7E-06 47.1 6.8 88 336-433 13-102 (117)
115 1wil_A KIAA1045 protein; ring 92.9 0.029 1E-06 49.4 1.2 50 647-699 14-76 (89)
116 2eqk_A Tudor domain-containing 91.9 0.19 6.6E-06 44.8 5.2 45 242-286 24-68 (85)
117 3kv4_A PHD finger protein 8; e 91.9 0.021 7.3E-07 66.7 -1.2 49 649-698 5-55 (447)
118 3kv5_D JMJC domain-containing 91.6 0.035 1.2E-06 65.7 0.3 49 649-698 37-87 (488)
119 3dlm_A Histone-lysine N-methyl 91.2 0.45 1.5E-05 49.5 7.8 133 240-396 69-209 (213)
120 2m0o_A PHD finger protein 1; t 90.3 0.33 1.1E-05 41.8 4.8 44 241-285 28-71 (79)
121 2f5k_A MORF-related gene 15 is 89.5 0.35 1.2E-05 44.8 4.9 61 329-399 18-80 (102)
122 1wew_A DNA-binding family prot 89.3 0.15 5.1E-06 45.1 2.1 32 760-792 16-49 (78)
123 3fdr_A Tudor and KH domain-con 88.2 0.66 2.3E-05 42.2 5.8 46 240-286 28-74 (94)
124 1we9_A PHD finger family prote 87.9 0.19 6.7E-06 42.4 1.8 30 761-792 7-39 (64)
125 1wep_A PHF8; structural genomi 87.7 0.21 7.1E-06 44.2 2.0 29 760-791 12-43 (79)
126 4a4f_A SurviVal of motor neuro 86.9 0.73 2.5E-05 38.9 4.8 58 330-398 5-63 (64)
127 2rsd_A E3 SUMO-protein ligase 85.9 0.24 8.3E-06 42.4 1.3 28 762-790 12-41 (68)
128 1wee_A PHD finger family prote 85.1 0.28 9.5E-06 42.5 1.4 31 759-792 15-48 (72)
129 2xk0_A Polycomb protein PCL; t 84.4 1.5 5E-05 37.2 5.3 43 241-286 17-59 (69)
130 2g6q_A Inhibitor of growth pro 84.2 0.41 1.4E-05 40.3 2.0 31 761-792 12-44 (62)
131 4gne_A Histone-lysine N-methyl 84.0 1 3.5E-05 42.1 4.7 65 705-792 16-86 (107)
132 2diq_A Tudor and KH domain-con 83.7 0.98 3.4E-05 42.3 4.6 46 240-286 33-79 (110)
133 2ldm_A Uncharacterized protein 84.0 0.22 7.6E-06 44.1 0.0 57 330-399 3-59 (81)
134 4bbq_A Lysine-specific demethy 82.9 0.67 2.3E-05 43.9 3.1 51 649-699 57-114 (117)
135 1wem_A Death associated transc 82.8 0.44 1.5E-05 41.7 1.6 28 761-791 17-46 (76)
136 4bbq_A Lysine-specific demethy 82.6 0.93 3.2E-05 42.9 4.0 76 649-739 8-98 (117)
137 3dlm_A Histone-lysine N-methyl 82.4 3.6 0.00012 42.7 8.5 115 237-398 6-126 (213)
138 1mhn_A SurviVal motor neuron p 82.3 1.5 5E-05 36.4 4.5 56 332-398 2-58 (59)
139 2e5p_A Protein PHF1, PHD finge 82.1 2.6 8.9E-05 35.5 5.8 45 240-285 10-54 (68)
140 2d9t_A Tudor domain-containing 81.7 1.7 5.8E-05 38.2 5.0 58 332-400 8-66 (78)
141 2e5q_A PHD finger protein 19; 81.5 2 6.9E-05 35.6 4.9 43 242-285 10-52 (63)
142 3o70_A PHD finger protein 13; 81.5 0.52 1.8E-05 40.4 1.6 29 761-792 20-50 (68)
143 3pnw_C Tudor domain-containing 81.4 1.1 3.8E-05 39.3 3.7 59 330-399 14-73 (77)
144 3s6w_A Tudor domain-containing 81.2 1.7 5.7E-05 35.3 4.5 52 334-396 2-54 (54)
145 3o7a_A PHD finger protein 13 v 80.8 0.63 2.2E-05 37.6 1.8 30 761-792 4-35 (52)
146 3c6w_A P28ING5, inhibitor of g 80.7 0.66 2.3E-05 38.6 1.9 30 761-791 10-41 (59)
147 2wac_A CG7008-PA; unknown func 80.1 2.1 7E-05 44.7 6.0 44 241-286 53-97 (218)
148 2l5u_A Chromodomain-helicase-D 80.0 0.65 2.2E-05 38.9 1.6 29 761-792 12-40 (61)
149 2xb1_A Pygopus homolog 2, B-ce 79.3 0.69 2.3E-05 43.2 1.7 29 761-790 4-35 (105)
150 1wen_A Inhibitor of growth fam 79.1 0.74 2.5E-05 39.8 1.7 30 761-791 17-48 (71)
151 2k16_A Transcription initiatio 78.7 0.61 2.1E-05 40.6 1.1 30 761-792 19-50 (75)
152 2kgg_A Histone demethylase jar 78.4 0.73 2.5E-05 37.2 1.4 29 762-791 4-35 (52)
153 2lv9_A Histone-lysine N-methyl 77.5 0.8 2.7E-05 42.2 1.6 27 762-791 30-58 (98)
154 2d8s_A Cellular modulator of i 77.4 1.1 3.8E-05 39.6 2.4 52 646-699 13-67 (80)
155 2lrq_A Protein MRG15, NUA4 com 79.0 0.47 1.6E-05 42.5 0.0 59 331-399 10-70 (85)
156 2equ_A PHD finger protein 20-l 77.3 3.2 0.00011 36.2 5.2 56 331-399 7-62 (74)
157 1weu_A Inhibitor of growth fam 77.2 1.1 3.7E-05 40.7 2.3 30 761-791 37-68 (91)
158 2vnf_A ING 4, P29ING4, inhibit 77.2 0.98 3.3E-05 37.7 1.9 30 761-791 11-42 (60)
159 2jmi_A Protein YNG1, ING1 homo 76.5 1 3.4E-05 40.9 1.9 31 760-791 26-58 (90)
160 2puy_A PHD finger protein 21A; 76.1 0.9 3.1E-05 37.8 1.4 29 761-792 6-34 (60)
161 2vpb_A Hpygo1, pygopus homolog 75.7 0.85 2.9E-05 38.7 1.1 29 761-790 9-40 (65)
162 4hcz_A PHD finger protein 1; p 75.4 3 0.0001 34.2 4.2 53 333-397 3-55 (58)
163 2yql_A PHD finger protein 21A; 74.7 1.3 4.4E-05 36.3 1.9 29 761-792 10-38 (56)
164 2ri7_A Nucleosome-remodeling f 74.7 0.77 2.6E-05 46.6 0.7 28 760-790 8-38 (174)
165 2lri_C Autoimmune regulator; Z 74.5 0.8 2.7E-05 39.0 0.7 29 761-792 13-41 (66)
166 1xwh_A Autoimmune regulator; P 74.5 1.2 4.2E-05 37.7 1.9 30 760-792 8-37 (66)
167 3ask_A E3 ubiquitin-protein li 74.0 6.2 0.00021 41.7 7.4 28 242-269 5-32 (226)
168 1g5v_A SurviVal motor neuron p 73.7 3.6 0.00012 37.1 4.7 57 332-399 9-66 (88)
169 3oa6_A MALE-specific lethal 3 73.3 2.8 9.7E-05 39.2 4.1 67 329-399 15-87 (110)
170 2lcc_A AT-rich interactive dom 73.0 1.8 6.2E-05 37.9 2.6 60 331-399 3-67 (76)
171 1mm2_A MI2-beta; PHD, zinc fin 72.5 1 3.5E-05 37.6 0.9 30 760-792 9-38 (61)
172 3ntk_A Maternal protein tudor; 71.6 3.9 0.00013 41.2 5.1 42 240-282 48-90 (169)
173 3m9q_A Protein MALE-specific l 70.9 3.8 0.00013 37.8 4.3 64 332-399 18-87 (101)
174 2eko_A Histone acetyltransfera 69.8 6.6 0.00022 35.3 5.5 56 330-394 6-67 (87)
175 1f62_A Transcription factor WS 69.1 1.4 4.8E-05 35.2 0.9 29 762-792 2-32 (51)
176 2ku7_A MLL1 PHD3-CYP33 RRM chi 68.6 1.2 4.1E-05 42.7 0.5 35 665-699 2-44 (140)
177 3kqi_A GRC5, PHD finger protei 68.5 1.2 4E-05 38.9 0.4 29 762-792 11-42 (75)
178 3h8z_A FragIle X mental retard 67.9 6.2 0.00021 38.0 5.3 48 241-292 62-116 (128)
179 3rsn_A SET1/ASH2 histone methy 67.7 3.5 0.00012 41.8 3.7 44 654-698 10-58 (177)
180 2yt5_A Metal-response element- 67.6 2.1 7.3E-05 36.1 1.8 30 761-792 7-40 (66)
181 2eqj_A Metal-response element- 66.6 8 0.00027 32.7 5.0 54 332-397 12-65 (66)
182 1zbd_B Rabphilin-3A; G protein 66.5 3.4 0.00012 40.2 3.2 53 647-699 54-107 (134)
183 3m9p_A MALE-specific lethal 3 64.6 5.2 0.00018 37.4 3.9 66 330-399 16-87 (110)
184 3n71_A Histone lysine methyltr 64.5 3.9 0.00013 48.4 3.9 33 947-979 6-38 (490)
185 3qww_A SET and MYND domain-con 64.1 4.3 0.00015 47.3 4.1 30 948-977 7-36 (433)
186 4b9w_A TDRD1, tudor domain-con 64.0 8.1 0.00028 39.9 5.8 45 242-286 68-112 (201)
187 2zet_C Melanophilin; complex, 63.9 3.6 0.00012 41.0 2.8 50 648-699 68-117 (153)
188 2l8d_A Lamin-B receptor; DNA b 62.9 8.3 0.00028 32.4 4.3 54 332-397 8-62 (66)
189 2a20_A Regulating synaptic mem 62.1 4.6 0.00016 33.2 2.6 52 646-698 7-59 (62)
190 2ku3_A Bromodomain-containing 61.5 3.3 0.00011 35.7 1.9 32 760-793 16-51 (71)
191 3lqh_A Histone-lysine N-methyl 61.4 2.8 9.6E-05 43.0 1.6 29 761-791 3-37 (183)
192 1wev_A Riken cDNA 1110020M19; 60.9 3.3 0.00011 37.2 1.8 31 760-792 16-50 (88)
193 3asl_A E3 ubiquitin-protein li 60.8 2.9 0.0001 35.9 1.4 28 762-791 20-49 (70)
194 1fp0_A KAP-1 corepressor; PHD 60.3 3.1 0.00011 37.4 1.5 29 761-792 26-54 (88)
195 2e6s_A E3 ubiquitin-protein li 59.9 3.3 0.00011 36.3 1.6 28 762-791 28-57 (77)
196 2ro0_A Histone acetyltransfera 59.8 7.6 0.00026 35.2 4.0 56 329-394 19-76 (92)
197 2enn_A NPKC-theta, protein kin 59.7 5.7 0.00019 34.7 3.1 35 648-682 34-68 (77)
198 1ptq_A Protein kinase C delta 59.4 5.2 0.00018 31.5 2.6 34 648-681 11-44 (50)
199 2dig_A Lamin-B receptor; tudor 59.2 10 0.00035 31.9 4.3 55 331-397 10-65 (68)
200 2l43_A N-teminal domain from h 59.0 3.7 0.00013 36.9 1.8 31 761-793 26-60 (88)
201 3k1l_B Fancl; UBC, ring, RWD, 58.4 3.7 0.00013 46.0 2.0 35 647-681 307-344 (381)
202 2rnz_A Histone acetyltransfera 58.2 8.8 0.0003 34.9 4.1 57 331-398 23-81 (94)
203 3fdr_A Tudor and KH domain-con 57.7 15 0.00053 32.9 5.8 56 333-400 27-83 (94)
204 4b9x_A TDRD1, tudor domain-con 56.8 9.3 0.00032 40.3 4.8 44 242-286 68-112 (226)
205 1weq_A PHD finger protein 7; s 56.7 10 0.00036 33.8 4.2 36 663-700 44-80 (85)
206 2hqx_A P100 CO-activator tudor 56.6 11 0.00038 40.1 5.4 44 241-286 67-111 (246)
207 2e6r_A Jumonji/ARID domain-con 56.5 3.7 0.00013 37.3 1.3 30 761-792 17-48 (92)
208 2yuu_A NPKC-delta, protein kin 56.3 6.5 0.00022 34.8 2.9 35 648-682 28-62 (83)
209 2enz_A NPKC-theta, protein kin 55.7 7.5 0.00026 32.6 3.1 35 648-682 23-57 (65)
210 1faq_A RAF-1; transferase, ser 55.7 6.9 0.00023 31.1 2.7 31 648-682 14-44 (52)
211 3qwp_A SET and MYND domain-con 55.6 7.6 0.00026 45.0 4.2 31 947-977 4-34 (429)
212 1x4i_A Inhibitor of growth pro 55.6 3.8 0.00013 35.2 1.2 30 762-792 8-39 (70)
213 2lcc_A AT-rich interactive dom 53.5 9.3 0.00032 33.4 3.4 38 240-277 6-47 (76)
214 3mea_A SAGA-associated factor 53.4 38 0.0013 34.4 8.3 122 242-398 47-178 (180)
215 1wgs_A MYST histone acetyltran 53.3 8.6 0.00029 37.3 3.4 59 332-398 11-71 (133)
216 3uej_A NPKC-delta, protein kin 53.0 6 0.00021 33.2 2.0 34 648-681 20-53 (65)
217 1wgs_A MYST histone acetyltran 52.7 11 0.00038 36.5 4.1 36 241-277 14-53 (133)
218 4h75_A Spindlin-1; tudor domai 52.5 20 0.00068 36.7 5.9 41 237-277 25-69 (238)
219 2eqm_A PHD finger protein 20-l 52.4 23 0.00078 31.8 5.8 58 331-399 17-78 (88)
220 1y8f_A UNC-13 homolog A, MUNC1 51.9 8.1 0.00028 32.6 2.7 35 648-682 24-58 (66)
221 3o36_A Transcription intermedi 51.5 4.3 0.00015 41.5 1.1 28 761-791 5-32 (184)
222 3rsn_A SET1/ASH2 histone methy 51.2 5.8 0.0002 40.2 1.9 29 762-792 6-37 (177)
223 1x4j_A Ring finger protein 38; 49.7 8 0.00027 33.0 2.4 49 646-699 21-69 (75)
224 3u5n_A E3 ubiquitin-protein li 49.6 5.3 0.00018 41.6 1.4 29 761-792 8-36 (207)
225 4b6d_A RAC GTPase-activating p 49.4 7.9 0.00027 32.3 2.1 32 649-681 20-51 (61)
226 2eli_A Protein kinase C alpha 49.0 12 0.00041 33.2 3.4 35 648-682 28-62 (85)
227 2ecl_A Ring-box protein 2; RNF 48.4 5.9 0.0002 34.6 1.3 49 647-698 14-72 (81)
228 2diq_A Tudor and KH domain-con 48.2 18 0.00063 33.5 4.8 55 333-399 32-87 (110)
229 2k3y_A Chromatin modification- 48.1 11 0.00036 36.7 3.1 66 333-399 9-105 (136)
230 1wil_A KIAA1045 protein; ring 48.0 4.7 0.00016 35.7 0.5 34 761-796 16-50 (89)
231 3kv4_A PHD finger protein 8; e 48.0 4.1 0.00014 47.5 0.3 28 762-791 6-36 (447)
232 1vyx_A ORF K3, K3RING; zinc-bi 47.1 1.9 6.4E-05 35.9 -2.1 50 646-698 4-55 (60)
233 2fnf_X Putative RAS effector N 47.0 12 0.0004 32.3 2.9 32 647-681 34-65 (72)
234 2db6_A SH3 and cysteine rich d 45.6 4.8 0.00016 34.9 0.2 35 648-682 28-62 (74)
235 1iym_A EL5; ring-H2 finger, ub 45.1 14 0.00047 29.2 2.9 48 647-698 4-51 (55)
236 2eko_A Histone acetyltransfera 44.6 21 0.00071 32.0 4.2 40 239-278 9-53 (87)
237 3mp6_A MBP, SGF29, maltose-bin 44.1 63 0.0022 38.0 9.8 107 252-397 403-513 (522)
238 2f5k_A MORF-related gene 15 is 43.6 24 0.00083 32.5 4.6 36 240-277 23-60 (102)
239 2xk0_A Polycomb protein PCL; t 43.1 37 0.0013 28.8 5.2 53 332-398 14-66 (69)
240 3smt_A Histone-lysine N-methyl 42.6 15 0.00052 43.4 4.0 34 948-981 93-126 (497)
241 2qqr_A JMJC domain-containing 42.4 30 0.001 32.7 5.2 42 239-282 5-46 (118)
242 3kv5_D JMJC domain-containing 42.1 6 0.0002 46.7 0.4 27 762-790 38-67 (488)
243 3a1b_A DNA (cytosine-5)-methyl 42.0 6.1 0.00021 39.4 0.4 46 648-698 79-133 (159)
244 1v5n_A PDI-like hypothetical p 41.2 10 0.00034 34.1 1.7 31 649-682 48-78 (89)
245 4a0k_B E3 ubiquitin-protein li 40.1 6.4 0.00022 37.3 0.2 35 647-681 47-94 (117)
246 2ro0_A Histone acetyltransfera 39.6 38 0.0013 30.6 5.2 36 241-278 25-62 (92)
247 2ro1_A Transcription intermedi 39.4 7.5 0.00026 40.0 0.6 29 761-792 3-31 (189)
248 1v87_A Deltex protein 2; ring- 39.2 8.1 0.00028 35.8 0.8 34 648-681 25-71 (114)
249 3dpl_R Ring-box protein 1; ubi 39.0 9.1 0.00031 35.5 1.1 35 647-681 36-83 (106)
250 3shb_A E3 ubiquitin-protein li 39.0 9.9 0.00034 33.3 1.2 29 762-792 28-58 (77)
251 3e9g_A Chromatin modification- 38.9 37 0.0013 32.5 5.2 66 333-399 7-103 (130)
252 1rfh_A RAS association (ralgds 38.5 9.2 0.00031 31.6 0.9 31 648-681 22-52 (59)
253 1weo_A Cellulose synthase, cat 38.4 13 0.00045 33.2 1.9 49 648-698 16-66 (93)
254 2ea6_A Ring finger protein 4; 38.1 13 0.00043 30.7 1.8 51 646-699 13-65 (69)
255 2ysl_A Tripartite motif-contai 38.1 35 0.0012 28.4 4.6 49 646-699 18-66 (73)
256 1kbe_A Kinase suppressor of RA 38.0 15 0.0005 29.3 2.0 29 649-681 15-43 (49)
257 2kiz_A E3 ubiquitin-protein li 37.7 14 0.00048 30.7 2.0 50 646-700 12-61 (69)
258 2lbm_A Transcriptional regulat 36.2 11 0.00039 36.9 1.3 29 761-792 64-92 (142)
259 2ecm_A Ring finger and CHY zin 36.2 19 0.00065 28.3 2.5 48 647-698 4-51 (55)
260 3pfq_A PKC-B, PKC-beta, protei 35.4 12 0.00041 46.0 1.7 80 650-735 50-149 (674)
261 1nj3_A NPL4; NZF domain, rubre 34.3 18 0.00061 25.7 1.7 24 689-712 5-28 (31)
262 1r79_A Diacylglycerol kinase, 33.6 15 0.00052 32.6 1.6 33 649-681 39-72 (84)
263 2bud_A Males-absent on the fir 33.4 30 0.001 31.2 3.4 58 335-398 16-75 (92)
264 2lq6_A Bromodomain-containing 33.1 18 0.00061 32.4 1.9 31 704-734 17-51 (87)
265 1e4u_A Transcriptional repress 33.0 12 0.00041 32.6 0.8 52 646-700 9-60 (78)
266 2ct0_A Non-SMC element 1 homol 32.9 16 0.00053 31.7 1.5 31 647-681 14-44 (74)
267 2pv0_B DNA (cytosine-5)-methyl 32.8 7.9 0.00027 44.1 -0.6 67 648-733 93-168 (386)
268 3qxy_A N-lysine methyltransfer 32.4 23 0.0008 41.2 3.4 34 948-981 38-72 (449)
269 2rnz_A Histone acetyltransfera 32.1 69 0.0024 29.1 5.6 37 241-279 27-65 (94)
270 2xdp_A Lysine-specific demethy 31.9 48 0.0016 31.6 4.7 39 239-279 64-102 (123)
271 2ct0_A Non-SMC element 1 homol 30.9 17 0.00058 31.5 1.4 30 761-792 16-45 (74)
272 2qqr_A JMJC domain-containing 30.9 61 0.0021 30.6 5.2 48 239-290 63-110 (118)
273 2xdp_A Lysine-specific demethy 30.9 20 0.0007 34.1 2.0 42 239-282 6-47 (123)
274 2crc_A Ubiquitin conjugating e 30.8 31 0.0011 27.8 2.8 29 686-714 6-34 (52)
275 2row_A RHO-associated protein 30.7 17 0.00058 32.4 1.3 33 648-681 35-70 (84)
276 2eqm_A PHD finger protein 20-l 29.7 1.1E+02 0.0037 27.3 6.5 48 242-290 22-72 (88)
277 2e5q_A PHD finger protein 19; 29.4 1E+02 0.0036 25.6 5.6 55 331-397 5-59 (63)
278 2ct2_A Tripartite motif protei 29.1 23 0.00078 30.7 2.0 53 646-699 13-65 (88)
279 3sd4_A PHD finger protein 20; 28.8 95 0.0033 26.2 5.7 46 242-288 15-63 (69)
280 1i4k_A Putative snRNP SM-like 27.8 1.2E+02 0.0043 25.8 6.5 60 239-299 10-76 (77)
281 2e5p_A Protein PHF1, PHD finge 27.7 94 0.0032 26.2 5.2 57 330-398 6-62 (68)
282 2xeu_A Ring finger protein 4; 27.6 12 0.0004 30.4 -0.2 49 648-699 3-53 (64)
283 2vrw_B P95VAV, VAV1, proto-onc 27.6 33 0.0011 39.2 3.4 35 647-681 356-390 (406)
284 4ap4_A E3 ubiquitin ligase RNF 27.2 13 0.00046 34.8 0.1 83 647-732 6-107 (133)
285 3sd4_A PHD finger protein 20; 27.1 70 0.0024 27.0 4.6 51 331-392 10-62 (69)
286 2m0o_A PHD finger protein 1; t 27.0 1.2E+02 0.004 26.3 5.8 52 332-395 25-76 (79)
287 3bdl_A Staphylococcal nuclease 26.6 56 0.0019 39.2 5.4 44 241-286 413-457 (570)
288 3ng2_A RNF4, snurf, ring finge 26.0 24 0.0008 29.3 1.4 51 646-699 8-60 (71)
289 2ku7_A MLL1 PHD3-CYP33 RRM chi 25.9 14 0.00048 35.0 -0.1 17 772-790 1-17 (140)
290 2ebr_A Nuclear pore complex pr 24.5 68 0.0023 25.3 3.6 27 686-713 8-34 (47)
291 2ysj_A Tripartite motif-contai 23.5 29 0.00099 28.2 1.4 31 646-681 18-48 (63)
292 3ky9_A Proto-oncogene VAV; cal 23.5 41 0.0014 40.4 3.4 36 647-682 528-563 (587)
293 3a9j_C Mitogen-activated prote 23.4 31 0.0011 25.0 1.4 26 688-713 6-31 (34)
294 2ep4_A Ring finger protein 24; 23.4 55 0.0019 27.3 3.3 48 647-699 14-61 (74)
295 2lcd_A AT-rich interactive dom 29.1 17 0.00059 33.9 0.0 50 234-285 51-100 (118)
296 3ql9_A Transcriptional regulat 23.2 32 0.0011 33.1 1.9 30 761-793 58-87 (129)
297 3nw0_A Non-structural maintena 23.2 39 0.0013 35.9 2.8 55 646-705 178-232 (238)
298 3gj3_B Nuclear pore complex pr 23.1 28 0.00094 25.4 1.0 25 688-712 5-29 (33)
299 2d9g_A YY1-associated factor 2 23.1 52 0.0018 26.6 2.8 27 688-714 9-35 (53)
300 2csz_A Synaptotagmin-like prot 23.0 33 0.0011 29.9 1.7 50 647-699 24-73 (76)
301 2lk0_A RNA-binding protein 5; 22.9 27 0.00092 25.1 1.0 24 689-712 4-27 (32)
302 2ect_A Ring finger protein 126 22.2 48 0.0016 28.1 2.7 49 646-699 13-61 (78)
303 3s6n_F Small nuclear ribonucle 22.1 1.5E+02 0.0053 26.0 6.1 61 239-300 12-79 (86)
304 2l0b_A E3 ubiquitin-protein li 22.1 29 0.001 30.7 1.3 47 647-698 39-85 (91)
305 1wvo_A Sialic acid synthase; a 21.6 28 0.00094 30.5 1.0 17 1048-1064 8-24 (79)
306 2bud_A Males-absent on the fir 21.5 2.2E+02 0.0076 25.6 6.8 37 243-280 18-59 (92)
307 2h21_A Ribulose-1,5 bisphospha 21.0 52 0.0018 38.0 3.5 23 958-980 32-54 (440)
308 1y96_A Gemin6, SIP2, GEM-assoc 20.5 82 0.0028 28.1 3.8 35 239-274 13-47 (86)
No 1
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00 E-value=8.1e-36 Score=312.63 Aligned_cols=156 Identities=51% Similarity=0.921 Sum_probs=140.9
Q ss_pred CcCChhhhhHHhhhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecC
Q 001263 931 NFLSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD 1010 (1112)
Q Consensus 931 ~~~~~~~~~~~l~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~ 1010 (1112)
..+++.++++.|+++.+.+|.|++|+++||||||+++|++|++|+||+|++|+..+++.|+.. |+. .+...|+|.++.
T Consensus 35 ~~~~~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-y~~-~~~~~Y~f~l~~ 112 (192)
T 2w5y_A 35 MDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKY-YDS-KGIGCYMFRIDD 112 (192)
T ss_dssp SSCCHHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHH-HHH-HTCCCCEEECSS
T ss_pred CCCCcchhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHH-Hhh-cCCceeeeeecC
Confidence 456889999999999999999999999999999999999999999999999999999988864 543 234689999999
Q ss_pred cceecccccCCccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC--CCeeeecCCCCCccccC
Q 001263 1011 ERVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID--EQLACYCGFPRCRGVVN 1088 (1112)
Q Consensus 1011 ~~~IDa~~~Gn~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~--~~~~C~Cgs~~Crg~~~ 1088 (1112)
..+|||+..||++|||||||+|||.+..+.+++..+|+|+|+|||++||||||||++...+ ..|.|+||+++|||+||
T Consensus 113 ~~~IDa~~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg~ln 192 (192)
T 2w5y_A 113 SEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFLN 192 (192)
T ss_dssp SEEEECTTTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCSBCC
T ss_pred ceEEECccccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcCcCC
Confidence 9999999999999999999999999998889999999999999999999999999987654 58999999999999997
No 2
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=4e-35 Score=323.96 Aligned_cols=158 Identities=26% Similarity=0.501 Sum_probs=144.5
Q ss_pred ChhhhhHHhhhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCcce
Q 001263 934 SMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERV 1013 (1112)
Q Consensus 934 ~~~~~~~~l~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~~~ 1013 (1112)
...|.|+.+|++...+|+|++++++||||||+++|++|+||+||+|+||+..+++.|... |........|++.++.+.+
T Consensus 103 ~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-y~~~~~~~~y~~~l~~~~~ 181 (278)
T 3h6l_A 103 GDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKE-YARNKNIHYYFMALKNDEI 181 (278)
T ss_dssp GGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHH-HHHTTCCCCCEEEEETTEE
T ss_pred CCCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHH-HHhccCccceeecccCCeE
Confidence 467899999999999999999999999999999999999999999999999999998875 4443455678899999999
Q ss_pred ecccccCCccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-CCeeeecCCCCCccccCCChH
Q 001263 1014 IDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRGVVNDTEA 1092 (1112)
Q Consensus 1014 IDa~~~Gn~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~-~~~~C~Cgs~~Crg~~~~~~~ 1092 (1112)
|||+.+||++|||||||+|||.+..+.+++..+|+|||+|||++||||||||++...+ ..+.|+||+++|||+|.+...
T Consensus 182 IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~Crg~l~~~~~ 261 (278)
T 3h6l_A 182 IDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGENR 261 (278)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTCCSEECCC--
T ss_pred EeCcccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECCCCCCeeecCCCCc
Confidence 9999999999999999999999999999999999999999999999999999987654 579999999999999998766
No 3
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=7.4e-35 Score=315.17 Aligned_cols=154 Identities=30% Similarity=0.551 Sum_probs=141.9
Q ss_pred ChhhhhHHhhhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCcce
Q 001263 934 SMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERV 1013 (1112)
Q Consensus 934 ~~~~~~~~l~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~~~ 1013 (1112)
...|.|+.++++...+|+|++++++||||||+++|++|++|+||+|++|+..+++.|... +........|+|.++..++
T Consensus 78 ~~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~-~~~~~~~~~y~~~l~~~~~ 156 (232)
T 3ooi_A 78 GGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRY-AQEHDITNFYMLTLDKDRI 156 (232)
T ss_dssp GGGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHH-HHHTTCCCCCEEEEETTEE
T ss_pred CCCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHH-HhhcCCCceeeeecCcceE
Confidence 457899999999999999999999999999999999999999999999999999988764 4433445689999999999
Q ss_pred ecccccCCccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-CCeeeecCCCCCccccC
Q 001263 1014 IDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRGVVN 1088 (1112)
Q Consensus 1014 IDa~~~Gn~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~-~~~~C~Cgs~~Crg~~~ 1088 (1112)
|||+..||++|||||||+|||.+..+.+++..+|+|||+|||++||||||||+++..+ .++.|+||+++|||+|+
T Consensus 157 IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~lG 232 (232)
T 3ooi_A 157 IDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG 232 (232)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSBCC
T ss_pred EeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcCcCC
Confidence 9999999999999999999999999999999999999999999999999999987654 57999999999999985
No 4
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=307.99 Aligned_cols=158 Identities=35% Similarity=0.590 Sum_probs=138.6
Q ss_pred CChhhhhHHhhhccc-ceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCc
Q 001263 933 LSMADKYKHMKETFR-KRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDE 1011 (1112)
Q Consensus 933 ~~~~~~~~~l~~~~~-~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~ 1011 (1112)
+...|.|+.+|++.. +.|+|.+++.+||||||+++|++|+||+||+|++|+..++..|....|.. ....|+|.++..
T Consensus 58 C~~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~--~~~~y~~~l~~~ 135 (222)
T 3ope_A 58 CGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHN--HSDHYCLNLDSG 135 (222)
T ss_dssp TTTSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTSTT--CCSCCEEEEETT
T ss_pred CCCCCCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhcc--cCCeEEEecCCC
Confidence 345788998988754 56999999999999999999999999999999999999988776544432 346799999999
Q ss_pred ceecccccCCccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC--CCeeeecCCCCCccccCC
Q 001263 1012 RVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID--EQLACYCGFPRCRGVVND 1089 (1112)
Q Consensus 1012 ~~IDa~~~Gn~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~--~~~~C~Cgs~~Crg~~~~ 1089 (1112)
++|||+.+||++|||||||+|||.+..+.+++..+|+|||+|||++||||||||++...+ ..+.|+||+++|||+|++
T Consensus 136 ~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg~i~~ 215 (222)
T 3ope_A 136 MVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGG 215 (222)
T ss_dssp EEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCSBCC-
T ss_pred EEEeCccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCCCcCCCCccCC
Confidence 999999999999999999999999999999999999999999999999999999987654 469999999999999998
Q ss_pred ChH
Q 001263 1090 TEA 1092 (1112)
Q Consensus 1090 ~~~ 1092 (1112)
...
T Consensus 216 ~~q 218 (222)
T 3ope_A 216 KSQ 218 (222)
T ss_dssp ---
T ss_pred CCc
Confidence 654
No 5
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=99.98 E-value=2.2e-32 Score=304.66 Aligned_cols=155 Identities=28% Similarity=0.478 Sum_probs=135.4
Q ss_pred CChhhhhHHhhhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecC--
Q 001263 933 LSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD-- 1010 (1112)
Q Consensus 933 ~~~~~~~~~l~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~-- 1010 (1112)
+...|+|+.+|++...+|+|++++++||||||+++|++|+||+||+|+||+..+++.|... |.. ....|+|.++.
T Consensus 111 C~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-~~~--~~~~Y~~~l~~~~ 187 (290)
T 3bo5_A 111 CSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHL-QTK--SDSNYIIAIREHV 187 (290)
T ss_dssp SCTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTT-CCS--SCCCCCEEEEECC
T ss_pred CCCCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHh-hcc--cCCcceeeecccc
Confidence 3568999999999999999999999999999999999999999999999999999888753 322 23579988753
Q ss_pred ------cceecccccCCccccCCCCCCCCceEEEEEECC-eeEEEEEEccCCCCCCeEEEecCCCCCC------------
Q 001263 1011 ------ERVIDATRAGSIAHLINHSCEPNCYSRVISVNG-DEHIIIFAKRDIKQWEELTYDYRFFSID------------ 1071 (1112)
Q Consensus 1011 ------~~~IDa~~~Gn~aRfINHSC~PNc~~~~~~~~~-~~~i~i~A~RdI~~GEELT~dY~~~~~~------------ 1071 (1112)
+++|||+.+||++|||||||+|||.+..+.+++ ..+|+|||+|||++||||||||+....+
T Consensus 188 ~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~ 267 (290)
T 3bo5_A 188 YNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDH 267 (290)
T ss_dssp -----EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEEC
T ss_pred cCCccceeEEeeeecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCcccccccccccccccc
Confidence 368999999999999999999999998888776 5799999999999999999999864421
Q ss_pred --CCeeeecCCCCCccccCCC
Q 001263 1072 --EQLACYCGFPRCRGVVNDT 1090 (1112)
Q Consensus 1072 --~~~~C~Cgs~~Crg~~~~~ 1090 (1112)
..++|+||+++|||+|+..
T Consensus 268 ~~~~~~C~CGs~~CrG~l~~~ 288 (290)
T 3bo5_A 268 GKLRKPCYCGAKSCTAFLPFD 288 (290)
T ss_dssp SSCCCBCCCCCTTCCSBCCCE
T ss_pred CCCCccccCCCcCCCccCCCC
Confidence 3579999999999999753
No 6
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=99.97 E-value=3.7e-32 Score=304.06 Aligned_cols=153 Identities=29% Similarity=0.457 Sum_probs=119.2
Q ss_pred ChhhhhHHhhhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecC---
Q 001263 934 SMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD--- 1010 (1112)
Q Consensus 934 ~~~~~~~~l~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~--- 1010 (1112)
...|.|+.+|++...+|.|++++++||||||+++|++|+||+||+|+||+..+++.|... |+. ....|+|.++.
T Consensus 123 ~~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~-y~~--~~~~Y~f~l~~~~~ 199 (299)
T 1mvh_A 123 SMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKN-YDD--DGITYLFDLDMFDD 199 (299)
T ss_dssp CTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTT-CCS--CSCCCEEEECSSCS
T ss_pred CCCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHh-hhc--cCceEEEEecCCCC
Confidence 346889999999999999999999999999999999999999999999999999988864 443 23689999984
Q ss_pred --cceecccccCCccccCCCCCCCCceEEEEEEC----CeeEEEEEEccCCCCCCeEEEecCCCCC----C---------
Q 001263 1011 --ERVIDATRAGSIAHLINHSCEPNCYSRVISVN----GDEHIIIFAKRDIKQWEELTYDYRFFSI----D--------- 1071 (1112)
Q Consensus 1011 --~~~IDa~~~Gn~aRfINHSC~PNc~~~~~~~~----~~~~i~i~A~RdI~~GEELT~dY~~~~~----~--------- 1071 (1112)
.++|||+.+||++|||||||+|||.+..++++ +..+|+|||+|||++||||||||++... +
T Consensus 200 ~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~ 279 (299)
T 1mvh_A 200 ASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRI 279 (299)
T ss_dssp SSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCCC---------
T ss_pred CccEEEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccccccccccccccccc
Confidence 58999999999999999999999998766664 3479999999999999999999987654 1
Q ss_pred --CCeeeecCCCCCccccCC
Q 001263 1072 --EQLACYCGFPRCRGVVND 1089 (1112)
Q Consensus 1072 --~~~~C~Cgs~~Crg~~~~ 1089 (1112)
..++|+||+++|||+|.+
T Consensus 280 ~k~~~~C~CGs~~Crg~l~g 299 (299)
T 1mvh_A 280 SKLRRQCKCGSANCRGWLFG 299 (299)
T ss_dssp --------------------
T ss_pred ccCCcCcCCCCCCCccccCC
Confidence 126999999999999864
No 7
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.3e-32 Score=303.14 Aligned_cols=152 Identities=31% Similarity=0.568 Sum_probs=132.1
Q ss_pred ChhhhhHHhhhcccceEEEEEec-ccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeec---
Q 001263 934 SMADKYKHMKETFRKRLAFGKSG-IHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRID--- 1009 (1112)
Q Consensus 934 ~~~~~~~~l~~~~~~~l~v~~S~-~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~--- 1009 (1112)
...|.|+.+|++.+.+|.|.++. ++||||||.++|++|+||+||+|+||+..+++.|... |+.. ...|+|.++
T Consensus 126 ~~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~-y~~~--~~~Y~f~l~~~~ 202 (300)
T 2r3a_A 126 GPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQF-YDNK--GITYLFDLDYES 202 (300)
T ss_dssp CTTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHT-CCHH--HHHTEEECCSSC
T ss_pred CCcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHH-hhhc--cccEEEEeecCC
Confidence 34688999999999999998875 7999999999999999999999999999999988753 4431 247999987
Q ss_pred CcceecccccCCccccCCCCCCCCceEEEEEECC----eeEEEEEEccCCCCCCeEEEecCCCCCC--------------
Q 001263 1010 DERVIDATRAGSIAHLINHSCEPNCYSRVISVNG----DEHIIIFAKRDIKQWEELTYDYRFFSID-------------- 1071 (1112)
Q Consensus 1010 ~~~~IDa~~~Gn~aRfINHSC~PNc~~~~~~~~~----~~~i~i~A~RdI~~GEELT~dY~~~~~~-------------- 1071 (1112)
..++|||+.+||++|||||||+|||.+..+.+++ ..+|+|||+|||++||||||||++....
T Consensus 203 ~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~ 282 (300)
T 2r3a_A 203 DEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKK 282 (300)
T ss_dssp SSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC--------------
T ss_pred ceEEEecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCccccccccccccccccc
Confidence 5789999999999999999999999998777753 5799999999999999999999876321
Q ss_pred -CCeeeecCCCCCccccC
Q 001263 1072 -EQLACYCGFPRCRGVVN 1088 (1112)
Q Consensus 1072 -~~~~C~Cgs~~Crg~~~ 1088 (1112)
..+.|+||+++|||+||
T Consensus 283 ~~~~~C~CGs~~Crg~ln 300 (300)
T 2r3a_A 283 RVRTVCKCGAVTCRGYLN 300 (300)
T ss_dssp CCCCBCCCCCTTCCSBCC
T ss_pred cCCCEeeCCCccccccCc
Confidence 25899999999999997
No 8
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=99.97 E-value=3.8e-32 Score=305.20 Aligned_cols=152 Identities=26% Similarity=0.393 Sum_probs=114.9
Q ss_pred hhhhhHHhhhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecC----
Q 001263 935 MADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD---- 1010 (1112)
Q Consensus 935 ~~~~~~~l~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~---- 1010 (1112)
..|.|+.+|++...+|+|.+++++||||||+++|++|+||+||+|+||+..+++.|... |......+.|+|.++.
T Consensus 120 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-~~~~~~~~~Y~f~l~~~~~~ 198 (302)
T 1ml9_A 120 KDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAE-STIARRKDVYLFALDKFSDP 198 (302)
T ss_dssp TTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHH-SCGGGCHHHHEEECCSSCCS
T ss_pred CCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHH-HhhhcCCceEEEEeccccCc
Confidence 45788999999999999999999999999999999999999999999999999988764 3222334679999874
Q ss_pred ----------cceecccccCCccccCCCCCCCCceEEEEEEC----CeeEEEEEEccCCCCCCeEEEecCCCCCC-----
Q 001263 1011 ----------ERVIDATRAGSIAHLINHSCEPNCYSRVISVN----GDEHIIIFAKRDIKQWEELTYDYRFFSID----- 1071 (1112)
Q Consensus 1011 ----------~~~IDa~~~Gn~aRfINHSC~PNc~~~~~~~~----~~~~i~i~A~RdI~~GEELT~dY~~~~~~----- 1071 (1112)
.++|||+.+||++|||||||+|||.+..+..+ +..+|+|||+|||++||||||||++....
T Consensus 199 ~~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~ 278 (302)
T 1ml9_A 199 DSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDA 278 (302)
T ss_dssp SSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC---------
T ss_pred ccccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCcccccccc
Confidence 68999999999999999999999987654432 23699999999999999999999875432
Q ss_pred -------CCeeeecCCCCCcccc
Q 001263 1072 -------EQLACYCGFPRCRGVV 1087 (1112)
Q Consensus 1072 -------~~~~C~Cgs~~Crg~~ 1087 (1112)
..++|+||+++|||+|
T Consensus 279 ~~~~k~~~~~~C~CGs~~Crg~l 301 (302)
T 1ml9_A 279 HDPSKISEMTKCLCGTAKCRGYL 301 (302)
T ss_dssp -----------------------
T ss_pred ccccccCCCcEeeCCCCcCcccc
Confidence 2479999999999997
No 9
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=99.97 E-value=1.2e-31 Score=297.96 Aligned_cols=143 Identities=31% Similarity=0.554 Sum_probs=126.4
Q ss_pred hhhhhHHhhhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCc---
Q 001263 935 MADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDE--- 1011 (1112)
Q Consensus 935 ~~~~~~~l~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~--- 1011 (1112)
..|.|+.+|++...+|+|++++++||||||+++|++|+||+||+|++|+..+++.|+. ..|+|.++..
T Consensus 134 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~~---------~~Y~f~l~~~~~~ 204 (287)
T 3hna_A 134 RNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVREE---------DSYLFDLDNKDGE 204 (287)
T ss_dssp TTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCSC---------CTTEEESCCSSSS
T ss_pred CCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhcc---------cceEEEeccCCCc
Confidence 3578889999999999999999999999999999999999999999999988876642 5799998754
Q ss_pred -ceecccccCCccccCCCCCCCCceEEEEEECCe----eEEEEEEccCCCCCCeEEEecCCCCC---CCCeeeecCCCCC
Q 001263 1012 -RVIDATRAGSIAHLINHSCEPNCYSRVISVNGD----EHIIIFAKRDIKQWEELTYDYRFFSI---DEQLACYCGFPRC 1083 (1112)
Q Consensus 1012 -~~IDa~~~Gn~aRfINHSC~PNc~~~~~~~~~~----~~i~i~A~RdI~~GEELT~dY~~~~~---~~~~~C~Cgs~~C 1083 (1112)
++|||+.+||++|||||||+|||.+..+++.+. .+|+|||+|||++||||||||+.... ...+.|+||+++|
T Consensus 205 ~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CGs~~C 284 (287)
T 3hna_A 205 VYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKC 284 (287)
T ss_dssp CEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCCCTTC
T ss_pred eEEEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCCCCCC
Confidence 599999999999999999999999877665543 59999999999999999999996432 3579999999999
Q ss_pred ccc
Q 001263 1084 RGV 1086 (1112)
Q Consensus 1084 rg~ 1086 (1112)
||+
T Consensus 285 Rgs 287 (287)
T 3hna_A 285 RHS 287 (287)
T ss_dssp SCC
T ss_pred CCC
Confidence 985
No 10
>2wzo_A Transforming growth factor beta regulator 1; nucleus, cell cycle, tumor suppressor; 1.60A {Homo sapiens}
Probab=99.96 E-value=2.6e-29 Score=252.24 Aligned_cols=141 Identities=25% Similarity=0.465 Sum_probs=127.7
Q ss_pred CCCCCeeecccccccccceeeCCCcccccceeecCCeEEEeeeccccCCCCcceeeEEEEecCCCCCcceEEEEcCCCCc
Q 001263 475 IGISPYVFGDLQILSLGKIVKDSEYFQDDRFIWPEGYTAVRKFTSLADPRVCNSYKMEVLRDTESKIRPLFRVTLDNGEQ 554 (1112)
Q Consensus 475 ~~~~P~~~g~l~i~slG~Iv~d~~~fh~~~~IyP~Gy~s~R~~~S~~dp~~~~~Y~~eIl~~~~~~~~P~F~Vt~ed~~~ 554 (1112)
...+|+.+|+|+|++||+|++++++||+++||||+||+++|.|+|+.||.++++|+|+|++++.. |+|+|+.++++.
T Consensus 2 ~p~lP~~~g~l~v~slG~i~~~~~~fh~~~~IyPvGy~~~R~y~s~~dp~~~~~Y~c~I~d~~~~---P~F~V~~e~~~~ 78 (146)
T 2wzo_A 2 RPVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGGVQ---PQFEIVPEDDPQ 78 (146)
T ss_dssp CCCCCEEETTEEEEEEEECCCSSGGGBCSSCBCCEEEEEEEEEECSSCTTSEEEEEEEEEECSSS---EEEEEEETTCGG
T ss_pred CceecEEECCEEEEEeeeEccCCCCccCCCceeCCCEEEEEEEecccCCCCeEEEEEEEEECCCc---ceeEEEecCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999998765 999999999864
Q ss_pred --ccCCCchhHHHHHHHHHHhhcCCCCCccccccccccccccCccccCCCChhHHHHhhccCCCCCCCccccccc
Q 001263 555 --FTGSTPSTCWSKICMKIREGQNNTSDDFSAEGAAEKISESGSDMFGFSNPEVMKLILGLTKSRPTSKSSLCKL 627 (1112)
Q Consensus 555 --~~g~Sps~~W~~v~k~ik~~~~~~~d~~~~~~~~~~~~~sG~~~FGls~P~V~klIqsLp~a~~~~k~~~~k~ 627 (1112)
+.|+||++||.++++++++.+... .....++|++||||++|.|+++|++||++++|.+|..++.
T Consensus 79 ~~~~g~Sp~~~W~~il~~i~~~~~~~---------~~~~~~sG~~~FGl~~p~V~~lie~Lpg~~~C~~Y~~~~f 144 (146)
T 2wzo_A 79 NAIVSSSADACHAELLRTISTTMGKL---------MPNLLPAGADFFGFSHPAIHNLIQSCPGARKCINYQWVKF 144 (146)
T ss_dssp GCEEESSHHHHHHHHHHHHHHHHTCC---------CTTCCCCHHHHHTTTSHHHHHHHTTSTTGGGCTTCCCCCC
T ss_pred ceEEeCChHHHHHHHHHHHHHHhcCc---------CCCCCCChhheecCCCHHHHHHHHhCCCchhcccCCcEEe
Confidence 899999999999999998765432 1224689999999999999999999999999999987765
No 11
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.96 E-value=9.2e-29 Score=254.64 Aligned_cols=134 Identities=31% Similarity=0.490 Sum_probs=119.0
Q ss_pred hhhhHHhhhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEe---ecCcc
Q 001263 936 ADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFR---IDDER 1012 (1112)
Q Consensus 936 ~~~~~~l~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~---~~~~~ 1012 (1112)
..-++.++++...+|+|.+++++||||||+++|++|++|+||+|++|+..+++.|... |........|+|. ++..+
T Consensus 18 ~~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~-~~~~~~~~~y~~~~~~~~~~~ 96 (166)
T 3f9x_A 18 KRIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREAL-YAQDPSTGCYMYYFQYLSKTY 96 (166)
T ss_dssp HHHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHH-HTTCTTSCCCEEEEEETTEEE
T ss_pred HHHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHH-HhhccCCCceEEEEecCCCCe
Confidence 3456778888999999999999999999999999999999999999999999999874 5543344556654 56888
Q ss_pred eeccccc-CCccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 001263 1013 VIDATRA-GSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 1070 (1112)
Q Consensus 1013 ~IDa~~~-Gn~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~ 1070 (1112)
+|||+.. ||++|||||||+|||.+..+.+++..+|+|||+|||++||||||||++.+.
T Consensus 97 ~iDa~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 97 CVDATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp EEECCSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred EEechhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 9999996 999999999999999999999999999999999999999999999998654
No 12
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.91 E-value=1.1e-24 Score=219.01 Aligned_cols=124 Identities=20% Similarity=0.257 Sum_probs=104.9
Q ss_pred CcCChhhhhHHhhhcccceEEEEEeccc--CeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEee
Q 001263 931 NFLSMADKYKHMKETFRKRLAFGKSGIH--GFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRI 1008 (1112)
Q Consensus 931 ~~~~~~~~~~~l~~~~~~~l~v~~S~~~--G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~ 1008 (1112)
...++......+.+++++.|.|++|.++ ||||||+++|++|++|++|.|++++..++. ...|+|.+
T Consensus 12 ~~~~~~~~~~~~~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~------------~~~Y~f~i 79 (149)
T 2qpw_A 12 ATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK------------NNVYMWEV 79 (149)
T ss_dssp CCCCGGGSCHHHHHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC------------CSSSEEEE
T ss_pred cccccchhhHHHHhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc------------cCceEEEE
Confidence 3456666777788889999999999865 999999999999999999999999876431 25799998
Q ss_pred c---C-cceecccc--cCCccccCCCCCCC---CceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 001263 1009 D---D-ERVIDATR--AGSIAHLINHSCEP---NCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 1070 (1112)
Q Consensus 1009 ~---~-~~~IDa~~--~Gn~aRfINHSC~P---Nc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~ 1070 (1112)
. . .++|||+. .||++|||||||+| ||.+.. . ..+|.|+|+|||++||||||||+..+.
T Consensus 80 ~~~~~~~~~IDa~~~~~gn~~RfINhSc~p~eqNl~~~~--~--~~~I~~~A~RdI~~GEEL~~dY~~~~~ 146 (149)
T 2qpw_A 80 YYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLE--I--NRAIYYKTLKPIAPGEELLVWYNGEDN 146 (149)
T ss_dssp EETTTEEEEEECSSGGGSCGGGGCEECBTTBTCCEEEEE--E--TTEEEEEESSCBCTTCBCEECCCCCCC
T ss_pred ecCCCeeEEEeCCCCCCCcceeeeeccCChhhcCEEEEE--E--CCEEEEEEccCCCCCCEEEEccCCccC
Confidence 4 2 35799998 99999999999999 988742 2 468999999999999999999997654
No 13
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.91 E-value=2.7e-24 Score=235.67 Aligned_cols=118 Identities=26% Similarity=0.340 Sum_probs=102.9
Q ss_pred cceEEEEEeccc--CeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCcceeccc-------
Q 001263 947 RKRLAFGKSGIH--GFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDAT------- 1017 (1112)
Q Consensus 947 ~~~l~v~~S~~~--G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~~~IDa~------- 1017 (1112)
.+.+.|++|+++ ||||||+++|++|++|+||+|++|+..+++.|... + ..|+|.++...+|||+
T Consensus 108 ~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~-~------~~~~f~l~~~~~IDa~~~~~~~~ 180 (261)
T 2f69_A 108 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWA-L------NGNTLSLDEETVIDVPEPYNHVS 180 (261)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGG-G------CSSCEECSSSCEEECCTTTTSTT
T ss_pred CceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhh-h------ccceeeecCCeEEEccccccccc
Confidence 457999999998 99999999999999999999999999999988753 3 2577999999999995
Q ss_pred -ccCCccccCCCCCCCCceEEEEEECC-eeEEEEEEccCCCCCCeEEEecCCCCCC
Q 001263 1018 -RAGSIAHLINHSCEPNCYSRVISVNG-DEHIIIFAKRDIKQWEELTYDYRFFSID 1071 (1112)
Q Consensus 1018 -~~Gn~aRfINHSC~PNc~~~~~~~~~-~~~i~i~A~RdI~~GEELT~dY~~~~~~ 1071 (1112)
..||++|||||||+|||.+..+...+ ...|+|||+|||++||||||||++....
T Consensus 181 ~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~~ 236 (261)
T 2f69_A 181 KYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP 236 (261)
T ss_dssp TCCSCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSCC
T ss_pred cccccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCcccc
Confidence 59999999999999999998764333 3445999999999999999999987653
No 14
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.90 E-value=7.5e-25 Score=213.00 Aligned_cols=110 Identities=25% Similarity=0.336 Sum_probs=97.0
Q ss_pred ccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCcceecccccCCcccc
Q 001263 946 FRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHL 1025 (1112)
Q Consensus 946 ~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~~~IDa~~~Gn~aRf 1025 (1112)
+.++++|++|+++||||||+++|++|++|+||.|++++..+++. ....|+|.++. |++..+|++||
T Consensus 2 ~~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~----------~~~~y~f~~~~----d~~~~~~~~~~ 67 (119)
T 1n3j_A 2 FNDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGT----------ALEDYLFSRKN----MSAMALGFGAI 67 (119)
T ss_dssp BCSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHH----------HSCSEEEEETT----EEEEESSSHHH
T ss_pred CCCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhh----------ccCCeEEEeCC----ccccccCceee
Confidence 35789999999999999999999999999999999999876654 12479999887 89999999999
Q ss_pred CCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC
Q 001263 1026 INHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID 1071 (1112)
Q Consensus 1026 INHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~ 1071 (1112)
|||||+|||.+.. ..+..++.|+|+|||++|||||+||+....+
T Consensus 68 ~NHsc~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~ 111 (119)
T 1n3j_A 68 FNHSKDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDYWL 111 (119)
T ss_dssp HHSCSSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCCCC
T ss_pred eccCCCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchhhc
Confidence 9999999998765 4567799999999999999999999986554
No 15
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.89 E-value=1.4e-23 Score=235.30 Aligned_cols=118 Identities=25% Similarity=0.312 Sum_probs=104.2
Q ss_pred cceEEEEEecccC--eeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCcceecc--------
Q 001263 947 RKRLAFGKSGIHG--FGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDA-------- 1016 (1112)
Q Consensus 947 ~~~l~v~~S~~~G--~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~~~IDa-------- 1016 (1112)
.+++.|++|+++| |||||+++|++|++|+||+|++|+..+++.|... + ..|.|.++...+|||
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~-~------~~~~~~l~~~~~iDa~~~~~~~~ 234 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWA-L------NGNTLSLDEETVIDVPEPYNHVS 234 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGG-G------CTTEEECSSSCEEECCTTTTSTT
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhh-c------ccCEEecCCCEEEeCcccccccc
Confidence 5679999999988 9999999999999999999999999999988753 2 257799999999999
Q ss_pred cccCCccccCCCCCCCCceEEEEEECCeeE-EEEEEccCCCCCCeEEEecCCCCCC
Q 001263 1017 TRAGSIAHLINHSCEPNCYSRVISVNGDEH-IIIFAKRDIKQWEELTYDYRFFSID 1071 (1112)
Q Consensus 1017 ~~~Gn~aRfINHSC~PNc~~~~~~~~~~~~-i~i~A~RdI~~GEELT~dY~~~~~~ 1071 (1112)
+..||+||||||||+|||.+..+...+..+ |+|+|+|||++||||||||+++..+
T Consensus 235 ~~~gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~~ 290 (293)
T 1h3i_A 235 KYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP 290 (293)
T ss_dssp TCCSCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBCC
T ss_pred eeeccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCCC
Confidence 779999999999999999998864444345 5899999999999999999998654
No 16
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.89 E-value=3.4e-24 Score=233.57 Aligned_cols=133 Identities=22% Similarity=0.213 Sum_probs=103.1
Q ss_pred ceEEEEEec-----ccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCcceecccccCCc
Q 001263 948 KRLAFGKSG-----IHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSI 1022 (1112)
Q Consensus 948 ~~l~v~~S~-----~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~~~IDa~~~Gn~ 1022 (1112)
..++|..+. .+||||||+++|++|++|+||+|+++...+++.+. |.. .....|.+... ....+++.+||+
T Consensus 131 ~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~---~~~-~~~~dF~i~~s-~~~~~a~~~g~~ 205 (273)
T 3s8p_A 131 SGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENM---LLR-HGENDFSVMYS-TRKNCAQLWLGP 205 (273)
T ss_dssp GCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHH---HCC-TTTSCTTEEEE-TTTTEEEEEESG
T ss_pred CCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHH---Hhh-hcccccceecc-ccccccceecch
Confidence 456777665 48999999999999999999999998877665532 211 11223333322 223468889999
Q ss_pred cccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-CCeeeecCCCCCccccC
Q 001263 1023 AHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRGVVN 1088 (1112)
Q Consensus 1023 aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~-~~~~C~Cgs~~Crg~~~ 1088 (1112)
+|||||||+|||.+. ..+..+|.|+|+|||++|||||+||+....+ ..+.|.||+.+|+|...
T Consensus 206 arfiNHSC~PN~~~~---~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~c~crG~g~ 269 (273)
T 3s8p_A 206 AAFINHDCRPNCKFV---STGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGTGA 269 (273)
T ss_dssp GGGCEECSSCSEEEE---EEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHHHHHHTCGG
T ss_pred HHhhCCCCCCCeEEE---EcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCCCcCCCCCC
Confidence 999999999999763 2345689999999999999999999987655 47899999999999854
No 17
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=99.85 E-value=6.6e-22 Score=189.30 Aligned_cols=101 Identities=25% Similarity=0.357 Sum_probs=82.8
Q ss_pred cccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccccccc-ccc
Q 001263 328 LDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSS-FHL 406 (1112)
Q Consensus 328 ~~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~-~~~ 406 (1112)
..++..|.+||||||||+|||||||+|+++..++. ..++.++..+.|+|+|||+++||||++++|+||.++.... ...
T Consensus 3 ~~~g~~~~~GdlVwaK~~g~p~WPa~V~~~~~~p~-~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~p~~~~~~~~~~~~ 81 (110)
T 2daq_A 3 SGSSGKLHYKQIVWVKLGNYRWWPAEICNPRSVPL-NIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQ 81 (110)
T ss_dssp SSCCCSCCSSEEEEEECSSSCEEEEEECCTTTSCH-HHHTSCCCSSCEEEEETTTTEEEEECSSSSEECCSSCCSSSCSS
T ss_pred CCCCCCCCCCCEEEEEeCCCCCCceeeCChhhCCH-HHhhccCCCCcEEEEEecCCCEEEEcHHHCcCcchhhHHHhhhc
Confidence 35677899999999999999999999999977765 3334444567899999999999999999999999873321 345
Q ss_pred cCChHHHHHHHHHHHHHHHhCCC
Q 001263 407 KCKKPRFTQSLEEAKVYLSEQKL 429 (1112)
Q Consensus 407 k~k~~~f~~Al~Ea~~~~~~~~~ 429 (1112)
+++++.|++||+||++.+++.+.
T Consensus 82 ~~~~k~f~~Al~eA~~~~~~~~~ 104 (110)
T 2daq_A 82 TSINKTFKKALEEAAKRFQELKA 104 (110)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHS
T ss_pred ccchHHHHHHHHHHHHHHHHHHh
Confidence 66779999999999999877544
No 18
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=99.84 E-value=1e-21 Score=181.90 Aligned_cols=85 Identities=27% Similarity=0.445 Sum_probs=74.4
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccccccccccccCCh
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKK 410 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~~~~k~k~ 410 (1112)
..+|++||||||||+|||||||+|+++... . .+...+.|+|+|||++++|||.+++|+||.++ ++.+.+++|+
T Consensus 3 p~~f~~GdlVwaK~~g~p~WPa~V~~~~~~----~--~k~~~~~~~V~FFGt~~~awv~~~~l~pf~~~-~~~~~k~~k~ 75 (94)
T 3qby_A 3 PHAFKPGDLVFAKMKGYPHWPARIDDIADG----A--VKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC-KDKYGKPNKR 75 (94)
T ss_dssp CCCCCTTCEEEECCTTSCCEEEEECCCCTT----S--BCCCTTCEEEEETTTCCEEEECGGGEEEHHHH-HHHHCSCCSS
T ss_pred CCcCccCCEEEEecCCCCCCCEEEeecccc----c--ccCCCCEEEEEEEcCCCcceEchhHeeEHHHH-HHHHccCccH
Confidence 367999999999999999999999986432 1 23456889999999999999999999999986 7789988999
Q ss_pred HHHHHHHHHHHH
Q 001263 411 PRFTQSLEEAKV 422 (1112)
Q Consensus 411 ~~f~~Al~Ea~~ 422 (1112)
+.|++||+||+.
T Consensus 76 k~F~~Al~Eien 87 (94)
T 3qby_A 76 KGFNEGLWEIQN 87 (94)
T ss_dssp TTHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999999974
No 19
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=99.83 E-value=1.2e-21 Score=198.41 Aligned_cols=87 Identities=26% Similarity=0.463 Sum_probs=74.2
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccccccccccccCCh
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKK 410 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~~~~k~k~ 410 (1112)
..+|++||||||||+|||||||+|+++.... .+...+.|+|+|||+++||||.+++|+||.++ +.++.+++|+
T Consensus 20 ~~~f~~GdlVwaK~~g~p~WPa~V~~~~~~~------~~~~~~~~~V~FfG~~~~awv~~~~l~~f~e~-~~~~~k~~k~ 92 (153)
T 4fu6_A 20 TRDFKPGDLIFAKMKGYPHWPARVDEVPDGA------VKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN-KEKYGKPNKR 92 (153)
T ss_dssp GGGCCTTCEEEECCTTSCCEEEEECCCC---------CCCCTTCEEEEETTTCCEEEECGGGEEEHHHH-HHHHCSCCSS
T ss_pred ccCCCCCCEEEEeCCCCCCCCEEEeEchhhc------cCCCCCEEEEEecCCCCeEEeCHHHccChHhH-HHHHhcccch
Confidence 3579999999999999999999999865432 22345679999999999999999999999987 7888888999
Q ss_pred HHHHHHHHHHHHHH
Q 001263 411 PRFTQSLEEAKVYL 424 (1112)
Q Consensus 411 ~~f~~Al~Ea~~~~ 424 (1112)
+.|++||+||+...
T Consensus 93 k~f~~Av~Eie~~~ 106 (153)
T 4fu6_A 93 KGFNEGLWEIDNNP 106 (153)
T ss_dssp TTHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCh
Confidence 99999999997653
No 20
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=99.82 E-value=8.5e-21 Score=180.74 Aligned_cols=87 Identities=26% Similarity=0.438 Sum_probs=74.6
Q ss_pred ccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccccccccccccC
Q 001263 329 DDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKC 408 (1112)
Q Consensus 329 ~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~~~~k~ 408 (1112)
.+...|++||||||||+|||||||+|++.+.. .+ +...+.|+|+|||++++|||++++|+||.++ ..++.+++
T Consensus 15 ~~~~~~~~GdlVwaK~kGyP~WPa~V~~~p~~----~~--k~~~~~~~V~FFGt~~~awv~~~~l~pf~~~-~~k~~~~~ 87 (110)
T 1ri0_A 15 NRQKEYKCGDLVFAKMKGYPHWPARIDEMPEA----AV--KSTANKYQVFFFGTHETAFLGPKDLFPYEES-KEKFGKPN 87 (110)
T ss_dssp CCSSSCCTTCEEEEEETTEEEEEEEEECCCSS----SS--CCCSSCEEEEETTTTEEEEECSTTEECHHHH-HHHCCCCC
T ss_pred cccCCCCCCCEEEEEeCCCCCCCEEEecccHh----hc--CCCCCEEEEEEecCCCEEEECHHHccchhhh-HHHHcccc
Confidence 45568999999999999999999999975432 12 2456889999999999999999999999986 67788888
Q ss_pred ChHHHHHHHHHHHH
Q 001263 409 KKPRFTQSLEEAKV 422 (1112)
Q Consensus 409 k~~~f~~Al~Ea~~ 422 (1112)
|++.|++||+||+.
T Consensus 88 K~k~f~~Al~Eie~ 101 (110)
T 1ri0_A 88 KRKGFSEGLWEIEN 101 (110)
T ss_dssp CCHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHh
Confidence 89999999999964
No 21
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=99.81 E-value=3.1e-21 Score=183.42 Aligned_cols=96 Identities=24% Similarity=0.273 Sum_probs=77.6
Q ss_pred cCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccccccccccc--c
Q 001263 330 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHL--K 407 (1112)
Q Consensus 330 ~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~~~~--k 407 (1112)
....|++||||||||+|||||||+|++++.++. ..++.+...+.|+|+|||+++||||++++|+||..+.+..+.. +
T Consensus 2 ~~~~~~~GdlVwaK~~gyP~WPa~V~~~~~~p~-~v~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~~~~~~~~~~~~k 80 (108)
T 2l89_A 2 ADDRLNFGDRILVKAPGYPWWPALLLRRKETKD-SLNTNSSFNVLYKVLFFPDFNFAWVKRNSVKPLLDSEIAKFLGSSK 80 (108)
T ss_dssp CSCCCCTTEEEEEECSSSCEEEEEEEEEEEEES-SSCSSSCEEEEEEEEETTTTEEEEECGGGEEECCHHHHHHHHHCSS
T ss_pred CCCcccCCCEEEEEeCCcCCCceEecCcccCcH-HHhhccCCCCeEEEEECCCCCEEEEchhhceeCCHHHHHHHHhccC
Confidence 356899999999999999999999999887776 4455444568899999999999999999999999764444443 3
Q ss_pred CChHHHHHHHHHHHHHHHh
Q 001263 408 CKKPRFTQSLEEAKVYLSE 426 (1112)
Q Consensus 408 ~k~~~f~~Al~Ea~~~~~~ 426 (1112)
.|.+.+++|+++|......
T Consensus 81 ~k~k~l~~Aye~A~~~~~l 99 (108)
T 2l89_A 81 RKSKELIEAYEASKTPPDL 99 (108)
T ss_dssp SCCHHHHHHHHHHTCGGGT
T ss_pred CCCHHHHHHHHHHccCCCH
Confidence 4458899999998765444
No 22
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.81 E-value=8.5e-21 Score=205.06 Aligned_cols=127 Identities=20% Similarity=0.251 Sum_probs=95.4
Q ss_pred ceEEEEEe-----cccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecCcceecccccCCc
Q 001263 948 KRLAFGKS-----GIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSI 1022 (1112)
Q Consensus 948 ~~l~v~~S-----~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~~~~IDa~~~Gn~ 1022 (1112)
..++|..+ ..+|+||||+++|++|++|.||+|+++...+++.+. +.. ..+.|.+... ...+++..+||+
T Consensus 103 ~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~---~~~--~~n~f~i~~~-~~~~~~~l~~~~ 176 (247)
T 3rq4_A 103 SGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGL---LRA--GENDFSIMYS-TRKRSAQLWLGP 176 (247)
T ss_dssp GCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGG---CCT--TTSCTTEEEE-TTTTEEEEEESG
T ss_pred CCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHh---hhc--cCCcEEEEec-CCcccceeecch
Confidence 45666664 368999999999999999999999998766665532 211 1223333332 334678889999
Q ss_pred cccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-CCeeeecCCCCCcc
Q 001263 1023 AHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRG 1085 (1112)
Q Consensus 1023 aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~-~~~~C~Cgs~~Crg 1085 (1112)
+|||||||+|||.+.. + +..+|.|+|+|||++|||||+||+..... ..+.|.|+ .|..
T Consensus 177 ar~iNHSC~PN~~~~~--~-~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~--~C~~ 235 (247)
T 3rq4_A 177 AAFINHDCKPNCKFVP--A-DGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECH--TCER 235 (247)
T ss_dssp GGGCEECSSCSEEEEE--E-TTTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCH--HHHH
T ss_pred hhhcCCCCCCCEEEEE--e-CCCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECC--CCCC
Confidence 9999999999996543 3 34689999999999999999999987654 46778885 5654
No 23
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=185.88 Aligned_cols=107 Identities=21% Similarity=0.426 Sum_probs=83.8
Q ss_pred ccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCC-CEEEeeCCCcccccccccccccc-
Q 001263 329 DDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTH-DFARINVKQVISFLKGLLSSFHL- 406 (1112)
Q Consensus 329 ~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~-~~awv~~~~l~~f~~~~~~~~~~- 406 (1112)
.++..|++||||||||+|||||||+|++++.... .++.+...+.|+|+|||++ +||||++++|+||.++......+
T Consensus 18 ~~~~~~~~GdlVwaK~~g~P~WPa~V~~~~~~~~--~~~~~~~~~~~~V~FFg~~~~~aWv~~~~l~pf~~~~~~~~~k~ 95 (134)
T 2gfu_A 18 PTSSDFSPGDLVWAKMEGYPWWPSLVYNHPFDGT--FIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKG 95 (134)
T ss_dssp CSSCCCCTTSEEEECCTTSCCEEEECCCCSSTTC--CEEESSSCEEEEEEECSSSCEEEEECGGGEEESCCTTSTTTSTT
T ss_pred CcCCCCCCCCEEEEeecCCCCCCeeecchhhhhh--hhhccCCCceEEEEECCCCCceEEECHHHcccCcchhHHHHhhc
Confidence 4567899999999999999999999999866543 2333344578999999996 79999999999999874433322
Q ss_pred ---cCChHHHHHHHHHHHHHHHhCCChhHHhhhh
Q 001263 407 ---KCKKPRFTQSLEEAKVYLSEQKLPRRMLQLQ 437 (1112)
Q Consensus 407 ---k~k~~~f~~Al~Ea~~~~~~~~~~~~~~~~~ 437 (1112)
+.+++.|++||++|.+++....+++..+.+.
T Consensus 96 ~~~~~~~~~~~~Ai~~A~~a~~~~~eeR~~~~~~ 129 (134)
T 2gfu_A 96 GHFYSAKPEILRAMQRADEALNKDKIKRLELAVS 129 (134)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHSSCHHHHHTTTTC
T ss_pred ccchhccHHHHHHHHHHHHHhcCCHHHHHHhhcc
Confidence 2356899999999999998777666544443
No 24
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=99.81 E-value=1.7e-20 Score=187.53 Aligned_cols=95 Identities=23% Similarity=0.456 Sum_probs=79.7
Q ss_pred cccccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccccccccc
Q 001263 326 ASLDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFH 405 (1112)
Q Consensus 326 ~~~~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~~~ 405 (1112)
.+++++..|.+||||||||+|||||||+|+++.... +.+...+.|+|+|||+++||||.+++|+||.++ .+.|+
T Consensus 9 ~e~~dg~~f~~GDLVWaKvkG~PwWPa~V~~~~~~~-----k~~~~~~~~~V~FFG~~~~awv~~~~L~pf~e~-~e~f~ 82 (154)
T 3llr_A 9 PEYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTG-----RSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSSF-CSAFH 82 (154)
T ss_dssp -CCCSSCCCCTTCEEEECCTTSCCEEEEEECGGGTT-----SCCCCTTEEEEEETTTCCEEEEEGGGEEEGGGH-HHHCC
T ss_pred cccccCCCCccCCEEEEecCCCCCCCEEEecccccc-----cccCCCCEEEEEEeCCCCEEEEcHHHCcchhhh-HHHHh
Confidence 567889999999999999999999999999976432 234556889999999999999999999999996 55555
Q ss_pred cc--CChHHHHHHHHHHHHHHHh
Q 001263 406 LK--CKKPRFTQSLEEAKVYLSE 426 (1112)
Q Consensus 406 ~k--~k~~~f~~Al~Ea~~~~~~ 426 (1112)
.. +|+..|++||+||.+.+..
T Consensus 83 ~~~~~K~~~fr~AV~eAle~a~~ 105 (154)
T 3llr_A 83 QATYNKQPMYRKAIYEVLQVASS 105 (154)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHHHHHHHHH
Confidence 43 5678999999999888764
No 25
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=99.78 E-value=7.3e-20 Score=174.71 Aligned_cols=95 Identities=21% Similarity=0.339 Sum_probs=72.9
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCC--CCCcEEEEEeCCCCEEEeeCCCccccccccccccccc-
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKIS--GGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLK- 407 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~--~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~~~~k- 407 (1112)
...|++||||||||+|||||||+|++++... ...++.++ ..+.|+|+|||++++|||+.++|+||.++....+..+
T Consensus 4 ~~~~~~GdlVwaK~~gyP~WPa~V~~p~~~~-~~~~~~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~~~~~~~~~~~~ 82 (109)
T 1h3z_A 4 RVNYKPGMRVLTKMSGFPWWPSMVVTESKMT-SVARKSKPKRAGTFYPVIFFPNKEYLWTGSDSLTPLTSEAISQFLEKP 82 (109)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEECCGGGCC-HHHHHTCCCSSSCEEEEEETTTTCCEEEEGGGEEECCHHHHHHHHHSC
T ss_pred cccCCCCCEEEEEeCCcCCCCEEEcccHHHh-HHhhccCCCCCCCEEEEEEcCCCCEEEECHHHeeeCCchHHHHHhhcc
Confidence 4579999999999999999999999765554 24444333 3688999999999999999999999987644444322
Q ss_pred -CChHHHHHHHHHHHHHHHh
Q 001263 408 -CKKPRFTQSLEEAKVYLSE 426 (1112)
Q Consensus 408 -~k~~~f~~Al~Ea~~~~~~ 426 (1112)
.|++.+.+|+++|.+....
T Consensus 83 ~~k~k~l~~Ay~~A~~~~~~ 102 (109)
T 1h3z_A 83 KPKTASLIKAYKMAQSTPDL 102 (109)
T ss_dssp SSCCHHHHHHHHHHHHCCSG
T ss_pred ccCCHHHHHHHHHHhccCCH
Confidence 3568888888888665443
No 26
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=99.77 E-value=1.5e-19 Score=180.46 Aligned_cols=95 Identities=22% Similarity=0.383 Sum_probs=77.6
Q ss_pred ccccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccccccccccc
Q 001263 327 SLDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHL 406 (1112)
Q Consensus 327 ~~~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~~~~ 406 (1112)
...++..|++||||||||+|||||||+|+++..... .+...+.|+|+|||+++||||.+++|+||.+. .+.|..
T Consensus 5 ~~~~~~~~~~GDlVWaKvkGyPwWPa~V~~~~~~~~-----~~~~~~~~~V~FFG~~~~awv~~~~L~p~~~~-~e~f~~ 78 (147)
T 1khc_A 5 EYQDDKEFGIGDLVWGKIKGFSWWPAMVVSWKATSK-----RQAMPGMRWVQWFGDGKFSEISADKLVALGLF-SQHFNL 78 (147)
T ss_dssp CCCSSSSCCTTCEEEEEETTTEEEEEEEECGGGTTS-----CCCCTTEEEEEETTTCCEEEEEGGGCEETTSH-HHHCCH
T ss_pred ccCCCccCcCCCEEEEecCCcCCCCEEeccchhhhc-----ccCCCCeEEEEEecCCCEEEEcHHHCccchHH-HHHHhh
Confidence 346777899999999999999999999999765332 23345789999999999999999999999874 666664
Q ss_pred c--CChHHHHHHHHHHHHHHHhC
Q 001263 407 K--CKKPRFTQSLEEAKVYLSEQ 427 (1112)
Q Consensus 407 k--~k~~~f~~Al~Ea~~~~~~~ 427 (1112)
+ +|++.|++||+||.+.+...
T Consensus 79 ~~~~K~~~f~kAv~eA~e~A~~r 101 (147)
T 1khc_A 79 ATFNKLVSYRKAMYHTLEKARVR 101 (147)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHH
T ss_pred hccccHHHHHHHHHHHHHHHHHH
Confidence 2 35588999999998877653
No 27
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.72 E-value=7.5e-18 Score=172.35 Aligned_cols=113 Identities=23% Similarity=0.244 Sum_probs=84.6
Q ss_pred cccceEEEEEeccc--CeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecC--c---ceeccc
Q 001263 945 TFRKRLAFGKSGIH--GFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD--E---RVIDAT 1017 (1112)
Q Consensus 945 ~~~~~l~v~~S~~~--G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~--~---~~IDa~ 1017 (1112)
.+.+.|.|++|.++ |+||||+++|++|+++++|.|++++..+++... .+.|+|.+.. . ++||++
T Consensus 24 sLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~~---------~~~y~w~i~~~~G~~~~~IDa~ 94 (170)
T 3ep0_A 24 VLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICK---------NNNLMWEVFNEDGTVRYFIDAS 94 (170)
T ss_dssp SCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC-------------------CEEEEECTTSSEEEEEECC
T ss_pred CCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhcccc---------CCceEEEEecCCCcEEEEEECC
Confidence 45778999999877 899999999999999999999999987765321 2478888752 2 589999
Q ss_pred c--cCCccccCCCCCC---CCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 001263 1018 R--AGSIAHLINHSCE---PNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 1070 (1112)
Q Consensus 1018 ~--~Gn~aRfINHSC~---PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~ 1070 (1112)
. .||++|||||+|. +||.+.. . ..+|.++|+|||.+||||+|+|+..+.
T Consensus 95 ~e~~~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 95 QEDHRSWMTYIKCARNEQEQNLEVVQ--I--GTSIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp ------GGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC---
T ss_pred CCCCcceeeeEEecCCcccCCeeeEE--E--CCEEEEEECcCcCCCCEEEEeeCHHHH
Confidence 8 8999999999996 7977644 3 368999999999999999999987543
No 28
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=99.69 E-value=9.2e-18 Score=166.69 Aligned_cols=96 Identities=22% Similarity=0.394 Sum_probs=68.5
Q ss_pred ccCCCCCCCcEEEEeccCcCCCCceeecCccccC-------------ccccc------cCCCCCcEEEEEeCC-CCEEEe
Q 001263 329 DDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGD-------------YKGLN------KISGGRSIPVQFFGT-HDFARI 388 (1112)
Q Consensus 329 ~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~-------------~~~~~------~~~~~~~~~V~FFG~-~~~awv 388 (1112)
++.-.|+||||||||++|||||||+|+++++... ...++ .+.+.+.|+|+|||+ ++|+||
T Consensus 32 ~~~~~~~pgdlVWAK~~GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd~~~t~aWV 111 (158)
T 3pfs_A 32 EDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTWQWL 111 (158)
T ss_dssp SCCSCCCTTCEEEEECTTSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECSTTCCEEEE
T ss_pred CcCCCCCCCCEEEEecCCCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcCCCCceEee
Confidence 3445699999999999999999999999887542 11222 123578899999997 689999
Q ss_pred eCCCcccccccc-cccc-cccCChHHHHHHHHHHHHHH
Q 001263 389 NVKQVISFLKGL-LSSF-HLKCKKPRFTQSLEEAKVYL 424 (1112)
Q Consensus 389 ~~~~l~~f~~~~-~~~~-~~k~k~~~f~~Al~Ea~~~~ 424 (1112)
+.++|+||..+. .+.. ....|+..+++||++|.+.+
T Consensus 112 ~~~~L~Pl~~d~~~D~~kl~e~Kks~~rKAl~~AYe~A 149 (158)
T 3pfs_A 112 PRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRA 149 (158)
T ss_dssp EGGGEEECSSCHHHHHHHHTTTTTSTHHHHHHHHHHHH
T ss_pred ccccEeecCCchhhhhhhhccCCCHHHHHHHHHHHHHH
Confidence 999999998642 2211 22345555666666664443
No 29
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.69 E-value=9.9e-18 Score=174.77 Aligned_cols=127 Identities=17% Similarity=0.186 Sum_probs=102.6
Q ss_pred hhcccceEEEEEecc--cCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecC----cceecc
Q 001263 943 KETFRKRLAFGKSGI--HGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD----ERVIDA 1016 (1112)
Q Consensus 943 ~~~~~~~l~v~~S~~--~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~----~~~IDa 1016 (1112)
...+...|.|+.|.+ +|+||||+++|++|+.+++|.|++++..++.... .+.|+|.+.. ..+|||
T Consensus 53 ~~SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~~---------~~~y~w~i~~~g~~~~~IDa 123 (196)
T 3dal_A 53 EASLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKNA---------NRKYFWRIYSRGELHHFIDG 123 (196)
T ss_dssp HHTCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC------------CCTTEEEEEETTEEEEEEEC
T ss_pred HhcCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhcc---------CCcceeeeccCCCEEEEEEC
Confidence 346788899999977 8999999999999999999999999887553211 2468888742 268999
Q ss_pred cc--cCCccccCCCCCC---CCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCCCCeeeecCCCCCcccc
Q 001263 1017 TR--AGSIAHLINHSCE---PNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDEQLACYCGFPRCRGVV 1087 (1112)
Q Consensus 1017 ~~--~Gn~aRfINHSC~---PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~~~~~C~Cgs~~Crg~~ 1087 (1112)
+. .||++|||||+|. +||.+.. . ..+|.++|+|||.+||||+++|+.. +.+.+|.+.|+..|
T Consensus 124 s~e~~gNWmRfVn~A~~~~eqNl~a~q--~--~~~I~y~a~RdI~pGeELlvwYg~~-----Y~~~lg~p~~~~~~ 190 (196)
T 3dal_A 124 FNEEKSNWMRYVNPAHSPREQNLAACQ--N--GMNIYFYTIKPIPANQELLVWYCRD-----FAERLHYPYPGELT 190 (196)
T ss_dssp CCTTSSCGGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECHH-----HHHHTTCCCTTCCC
T ss_pred CCCCCCceEEeEEecCCcccCCcEEEE--E--CCEEEEEECcccCCCCEEEEecCHH-----HHHHcCCCCCHHHH
Confidence 87 8999999999996 6987643 2 3689999999999999999999943 56677777776654
No 30
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.66 E-value=1.1e-16 Score=161.58 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=85.5
Q ss_pred hhcccceEEEEEe-cccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeecC----cceeccc
Q 001263 943 KETFRKRLAFGKS-GIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD----ERVIDAT 1017 (1112)
Q Consensus 943 ~~~~~~~l~v~~S-~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~~----~~~IDa~ 1017 (1112)
...+...|.|+.| +.+|+||||+++|++|+.+++|.|++++..++..+.. ....|+|.+.. ..+||++
T Consensus 18 ~~slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~~-------~~~~y~w~i~~~~~~~~~iD~~ 90 (151)
T 3db5_A 18 RLSLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTD-------KAVNHIWKIYHNGVLEFCIITT 90 (151)
T ss_dssp HHTCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC------------------CCSEEEEEETTEEEEEEECC
T ss_pred HhcCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhcccc-------cCCCceEEEEeCCCEEEEEECc
Confidence 3456788999997 4579999999999999999999999999987766531 11357776532 3589999
Q ss_pred c--cCCccccCCCCCCC---CceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 001263 1018 R--AGSIAHLINHSCEP---NCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 1070 (1112)
Q Consensus 1018 ~--~Gn~aRfINHSC~P---Nc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~ 1070 (1112)
. .||++|||||+|.+ ||.+... ..+|.++|+|||.+||||+++|+..+.
T Consensus 91 ~~~~~NWmR~Vn~A~~~~eqNl~a~q~----~~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 91 DENECNWMMFVRKARNREEQNLVAYPH----DGKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp CTTTSCGGGGCEECSSTTTCCEEEEEE----TTEEEEEESSCBCTTCBCEEEECC---
T ss_pred CCCCCcceeEEEecCCcccCceEEEEE----CCEEEEEEccccCCCCEEEEecCHHHH
Confidence 8 59999999999965 9877542 368999999999999999999987643
No 31
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=99.65 E-value=1.3e-16 Score=153.54 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=65.5
Q ss_pred CCCCCCcEEEEeccCcCCCCceeecCccccCc-------------cccc------cCCCCCcEEEEEeCC-CCEEEeeCC
Q 001263 332 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDY-------------KGLN------KISGGRSIPVQFFGT-HDFARINVK 391 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~-------------~~~~------~~~~~~~~~V~FFG~-~~~awv~~~ 391 (1112)
..|++|||||||++|||||||+|+++.+.... ..++ .......|+|+|||+ ++++||+.+
T Consensus 4 ~~~~~~dlVWAK~~gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd~~~t~aWv~~~ 83 (130)
T 3l42_A 4 SPLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTWQWLPRT 83 (130)
T ss_dssp SSSCTTCEEEECCTTSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESSTTCCEEEEEGG
T ss_pred ccCCCCCEEEEecccCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCCCCCceEeeccc
Confidence 46999999999999999999999998755411 1111 123468899999996 679999999
Q ss_pred Cccccccccccccc--ccCC----hHHHHHHHHHHHHHHH
Q 001263 392 QVISFLKGLLSSFH--LKCK----KPRFTQSLEEAKVYLS 425 (1112)
Q Consensus 392 ~l~~f~~~~~~~~~--~k~k----~~~f~~Al~Ea~~~~~ 425 (1112)
+|+||..+...... ...+ +++.+.|.+.|..++.
T Consensus 84 ~i~pl~~d~~~D~~kl~~s~K~~~rKav~~AYe~A~~~~~ 123 (130)
T 3l42_A 84 KLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRALQHRS 123 (130)
T ss_dssp GEEESSSCHHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ceeecCCchhhHHHhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999865211111 1123 3555556666655554
No 32
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.51 E-value=6.1e-15 Score=156.75 Aligned_cols=132 Identities=17% Similarity=0.128 Sum_probs=92.4
Q ss_pred hhcccceEEEEEecccCeeEEec-ccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEeec--C--cceeccc
Q 001263 943 KETFRKRLAFGKSGIHGFGIFAK-HPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRID--D--ERVIDAT 1017 (1112)
Q Consensus 943 ~~~~~~~l~v~~S~~~G~GlfA~-~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~~--~--~~~IDa~ 1017 (1112)
..++...|.|++|.++|.|||+. +.|++|+.+++|.|++++..+++ ..|+|.+. . ..+||++
T Consensus 67 ~lSLP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~-------------~~y~wei~~~~g~~~~IDgs 133 (237)
T 3ray_A 67 ALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA-------------GFFSWLIVDKNNRYKSIDGS 133 (237)
T ss_dssp HHTCCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC------------------CCEEEEECTTSCEEEEECC
T ss_pred HhcCCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc-------------ccceEEEEcCCCcEEEEecC
Confidence 45677889999999999999987 89999999999999999875431 24666663 2 2489999
Q ss_pred c--cCCccccCCCCCC---CCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCCCCeeeecCCCCCccccCCChH
Q 001263 1018 R--AGSIAHLINHSCE---PNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDEQLACYCGFPRCRGVVNDTEA 1092 (1112)
Q Consensus 1018 ~--~Gn~aRfINHSC~---PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~~~~~C~Cgs~~Crg~~~~~~~ 1092 (1112)
. .||++|||||+|. +|+.+.. . ..+|.|+|+|+|.+||||+++|+..+. ..+.+.|+...|++...+.+.
T Consensus 134 de~~gNWmRfVn~Ar~~~EqNL~A~q--~--~~~Iyy~a~RdI~pGeELlVwYg~~Y~-~~l~~~~~~~~~~~~~~~~k~ 208 (237)
T 3ray_A 134 DETKANWMRYVVISREEREQNLLAFQ--H--SERIYFRACRDIRPGEWLRVWYSEDYM-KRLHSMSQETIHRNLARGEKR 208 (237)
T ss_dssp CTTTSCGGGGCEECCCTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECHHHH-HHHCC----------------
T ss_pred CCCCCcceeEEEcCCCcccccceeEE--e--CCEEEEEEccccCCCCEEEEeeCHHHH-HHhcccccchhcccccchhhc
Confidence 7 7999999999996 6876643 2 368999999999999999999986532 456788999999888877665
No 33
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=99.44 E-value=3.3e-14 Score=129.39 Aligned_cols=77 Identities=32% Similarity=0.700 Sum_probs=62.7
Q ss_pred ccccccccCccceeecCc-CceeeecCCCCCCccccccchhhcCceEEeeccccccccccCCcccccccceeeccccCcc
Q 001263 752 NRVSKDRWKLLCSICGVS-YGACIQCSNTTCRVAYHPLCARAAGLCVELEDEDRLNLLSLDEDDEDQCIRLLSFCKKHKQ 830 (1112)
Q Consensus 752 ~~i~~~~~~~~C~iC~~~-~Ga~iqC~~~~C~~~FH~~CA~~aG~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~C~~H~~ 830 (1112)
-.||+.||+++|.+|++. .||||||...+|.++||++||+++|++|+++..+.. ..+.....+++.+||++|+|
T Consensus 9 ~NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~aGl~~~~~~~~~~-----~~~~~~~~v~~~~yC~~HsP 83 (87)
T 2lq6_A 9 MNIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKAGLYMKMEPVKEL-----TGGGTTFSVRKTAYCDVHTP 83 (87)
T ss_dssp CCCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHHTCCEEEEEEEEC-----TTTSCEEEEEEEECCGGGSS
T ss_pred cCCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHCCCceEeeccccc-----ccCCccccceECeECcCCCC
Confidence 358999999999999986 599999999999999999999999999988754221 11222445678899999998
Q ss_pred ccc
Q 001263 831 PLN 833 (1112)
Q Consensus 831 ~~~ 833 (1112)
|..
T Consensus 84 pg~ 86 (87)
T 2lq6_A 84 PGS 86 (87)
T ss_dssp SSC
T ss_pred cCC
Confidence 753
No 34
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.37 E-value=2.4e-13 Score=136.88 Aligned_cols=107 Identities=13% Similarity=0.113 Sum_probs=82.0
Q ss_pred hhcccceEEEEEecccCeeEEecccCCCCCeEEEEceeecChhHHhhhhHHhhhcccCCcceeEee------------cC
Q 001263 943 KETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRI------------DD 1010 (1112)
Q Consensus 943 ~~~~~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gevi~~~~~~~r~~~~y~~~~~~~~y~f~~------------~~ 1010 (1112)
..++...|.|.+ .|+||||++.|++|+.+++|.|++++..++.. ..|++.+ +.
T Consensus 18 ~~SLP~~L~i~~---~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~------------~~~~~~v~~~d~~~~~~~~~~ 82 (152)
T 3ihx_A 18 RASLPLVLYIDR---FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD------------CYIHLKVSLDKGDRKERDLHE 82 (152)
T ss_dssp HHTSCTTEEECT---TTCSEEESSCBCSSCEECCCCSCEECSTTCCS------------SSCCCBC--------------
T ss_pred hhcCCcceEEee---cCCeEEECceecCCCEEEeeccEEcCHHHhcc------------CcceEEEEccccccccccCCc
Confidence 334556677765 58999999999999999999999998865421 1222221 13
Q ss_pred cceecccc--cCCccccCCCCCC---CCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCC
Q 001263 1011 ERVIDATR--AGSIAHLINHSCE---PNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFF 1068 (1112)
Q Consensus 1011 ~~~IDa~~--~Gn~aRfINHSC~---PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~ 1068 (1112)
..+||++. .||++|||||+|. +||.+.. ...+|.+.|+|+|.+||||+++|+..
T Consensus 83 ~~~iD~~~~~~~NWmr~vn~a~~~~eqNl~a~q----~~~~I~~~~~r~I~pGeELlv~Y~~~ 141 (152)
T 3ihx_A 83 DLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQ----YGHHVYYTTIKNVEPKQELKVWYAAS 141 (152)
T ss_dssp -CEECCCCTTTSCGGGGCCBCCSTTTCCEEEEE----CSSSEEEEESSCBCTTCBCCEEECHH
T ss_pred cEEEEccCCCCCcceeeeeccCCccCCCcEEEE----eCCeEEEEEeeecCCCCEEEEechHH
Confidence 57899987 6999999999997 6877643 24688999999999999999999853
No 35
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.89 E-value=4.5e-10 Score=98.15 Aligned_cols=53 Identities=36% Similarity=0.800 Sum_probs=47.3
Q ss_pred ccCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccC
Q 001263 645 WKDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 645 ~~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
..+++.|.||..+++.+.|.||.||+|..+||+.|||+..+|+| .|+|+.|..
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g-~W~C~~C~~ 65 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEG-QWLCRHCLQ 65 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSS-CCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCC-CcCCccCcC
Confidence 45668999999988777889999999999999999999888877 999999975
No 36
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.77 E-value=1.8e-09 Score=98.44 Aligned_cols=55 Identities=35% Similarity=0.770 Sum_probs=47.9
Q ss_pred ccCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCCC
Q 001263 645 WKDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 645 ~~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~~ 700 (1112)
.+++..|.||+.+++.+.|.||.||+|..+||+.|||+..+|+| .|+|+.|....
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g-~W~C~~C~~~~ 76 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEG-QWLCRHCLQSR 76 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSS-CCCCHHHHHHT
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCC-ceECccccCcc
Confidence 35678999999987667789999999999999999998887877 99999998643
No 37
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.58 E-value=2e-08 Score=86.65 Aligned_cols=54 Identities=24% Similarity=0.515 Sum_probs=44.6
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcC----C-CCCCceecccccCCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELE----P-VNGVLWLCNLCRPGA 700 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~----~-~~~~~W~C~~C~~~~ 700 (1112)
.++..|.||....+.+.+.||+||+|..+||+.||+... + |.+ .|+|..|....
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~-~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDE-KWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSC-CCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCC-CEECCCCcCcc
Confidence 345799999988766778999999999999999999643 2 455 89999998654
No 38
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.46 E-value=5.4e-08 Score=88.78 Aligned_cols=53 Identities=21% Similarity=0.493 Sum_probs=44.2
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcC------CCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELE------PVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~------~~~~~~W~C~~C~~~ 699 (1112)
+++.+|.||...+....|.||+||+|..+||+.||+... +|.+ .|+|..|...
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g-~W~C~~C~~~ 72 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRL-VWYCARCTRQ 72 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTC-CCCCHHHHHH
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCC-CeeCccccch
Confidence 346799999998776678999999999999999999642 4666 9999999753
No 39
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.41 E-value=2.8e-07 Score=86.73 Aligned_cols=74 Identities=24% Similarity=0.495 Sum_probs=59.8
Q ss_pred cCcCccccccCCcccCCCeeEEcc--CCCccccccccCCcCCCCCCceecccccCCC--CCCCCCcccCCC------CCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCD--KCRMMVHARCYGELEPVNGVLWLCNLCRPGA--PEPPPPCCLCPV------VGG 715 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd--~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~~--~~~~~~C~LC~~------~gG 715 (1112)
+++++|.||..+ ..||.|| .|..+||..|+|+..+|.| .|+|+.|.-.. ....+.|.+||. ..|
T Consensus 13 ~~~~~C~~C~~~-----G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g-~W~Cp~c~C~~C~k~~~~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 13 MHEDYCFQCGDG-----GELVMCDKKDCPKAYHLLCLNLTQPPYG-KWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp SSCSSCTTTCCC-----SEEEECCSTTCCCEECTGGGTCSSCCSS-CCCCGGGBCTTTCSBCCEECSSSSCEECTTTCTT
T ss_pred CCCCCCCcCCCC-----CcEeEECCCCCCcccccccCcCCcCCCC-CEECCCCCCCcCCCCCCcCcCCCCcchhhhccCC
Confidence 456799999854 3699999 7999999999998888887 99999887432 223578999994 569
Q ss_pred CceecCCCce
Q 001263 716 AMKPTTDGRW 725 (1112)
Q Consensus 716 alK~t~~g~W 725 (1112)
+|+.+....|
T Consensus 87 ~l~~~~~~~~ 96 (107)
T 4gne_A 87 ALVPSALEGR 96 (107)
T ss_dssp SCEECTTTTC
T ss_pred cceecCCCCc
Confidence 9998887777
No 40
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.39 E-value=1.5e-07 Score=112.57 Aligned_cols=61 Identities=34% Similarity=0.483 Sum_probs=45.0
Q ss_pred ccccCCCCCCCCceEEEEEECCe-----------eEEEEEEccCCCCCCeEEEecCCCCCC-----------CCeeeecC
Q 001263 1022 IAHLINHSCEPNCYSRVISVNGD-----------EHIIIFAKRDIKQWEELTYDYRFFSID-----------EQLACYCG 1079 (1112)
Q Consensus 1022 ~aRfINHSC~PNc~~~~~~~~~~-----------~~i~i~A~RdI~~GEELT~dY~~~~~~-----------~~~~C~Cg 1079 (1112)
.+.||||||.|||.+.. .++. .++.|+|+|||++|||||++|...... ..|.|.|
T Consensus 200 ~~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C- 276 (490)
T 3n71_A 200 NLGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSC- 276 (490)
T ss_dssp TGGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCC-
T ss_pred hhhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeC-
Confidence 35567999999987544 3321 289999999999999999999865432 2566666
Q ss_pred CCCCccc
Q 001263 1080 FPRCRGV 1086 (1112)
Q Consensus 1080 s~~Crg~ 1086 (1112)
+.|..-
T Consensus 277 -~~C~~~ 282 (490)
T 3n71_A 277 -EHCQKG 282 (490)
T ss_dssp -HHHHHT
T ss_pred -CCCCCC
Confidence 677653
No 41
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.38 E-value=7.9e-08 Score=113.16 Aligned_cols=62 Identities=35% Similarity=0.545 Sum_probs=45.9
Q ss_pred CccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCCC---------CeeeecCCCCCccc
Q 001263 1021 SIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDE---------QLACYCGFPRCRGV 1086 (1112)
Q Consensus 1021 n~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~~---------~~~C~Cgs~~Crg~ 1086 (1112)
..+.||||||.|||.... . ..++.|+|+|||++|||||++|....... .+.+.|+++.|..-
T Consensus 200 ~~~s~~NHsC~PN~~~~~--~--~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~ 270 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVF--N--GPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQ 270 (429)
T ss_dssp TTGGGCEECSSCSEEEEE--E--TTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCSHHHHHT
T ss_pred hhhHhhCcCCCCCeEEEE--e--CCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeCCCCCCC
Confidence 457789999999987653 2 35789999999999999999998654431 23444455777654
No 42
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.31 E-value=2.6e-07 Score=75.49 Aligned_cols=46 Identities=33% Similarity=0.886 Sum_probs=38.9
Q ss_pred ccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 650 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 650 ~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
.|.||+..+. .+.||.||+|..+||+.|++ +..+|.+ .|+|+.|..
T Consensus 2 ~C~vC~~~~~--~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g-~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGE--DDKLILCDECNKAFHLFCLRPALYEVPDG-EWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSC--CSCCEECTTTCCEECHHHHCTTCCSCCSS-CCSCTTTSC
T ss_pred CCCCCCCCCC--CCCEEECCCCChhhCcccCCCCcCCCCCC-cEECcCccc
Confidence 6999998753 45799999999999999995 5566776 999999975
No 43
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.26 E-value=4.1e-07 Score=107.08 Aligned_cols=53 Identities=25% Similarity=0.321 Sum_probs=41.7
Q ss_pred ccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-----------CCeeeec
Q 001263 1022 IAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-----------EQLACYC 1078 (1112)
Q Consensus 1022 ~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~~~~-----------~~~~C~C 1078 (1112)
.+.||||||.|||.+.. .+ .++.|+|+|||++|||||++|...... ..|.|.|
T Consensus 201 ~~s~~NHsC~PN~~~~~--~~--~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C 264 (433)
T 3qww_A 201 DVALMNHSCCPNVIVTY--KG--TLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCEC 264 (433)
T ss_dssp TGGGSEECSSCSEEEEE--ET--TEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCS
T ss_pred cccccCCCCCCCceEEE--cC--CEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeEC
Confidence 45578999999987642 22 478999999999999999999875432 3678887
No 44
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.20 E-value=8.5e-07 Score=75.18 Aligned_cols=48 Identities=33% Similarity=0.722 Sum_probs=39.8
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~~ 699 (1112)
.++..|.||... +.||.||+|..+||+.|++ +..+|.+ .|+|..|...
T Consensus 7 ~~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g-~W~C~~C~~~ 56 (61)
T 1mm2_A 7 HHMEFCRVCKDG-----GELLCCDTCPSSYHIHCLNPPLPEIPNG-EWLCPRCTCP 56 (61)
T ss_dssp SSCSSCTTTCCC-----SSCBCCSSSCCCBCSSSSSSCCSSCCSS-CCCCTTTTTT
T ss_pred CCCCcCCCCCCC-----CCEEEcCCCCHHHcccccCCCcCcCCCC-ccCChhhcCc
Confidence 356799999864 3689999999999999999 4566766 8999999864
No 45
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.19 E-value=7.8e-07 Score=81.79 Aligned_cols=50 Identities=32% Similarity=0.618 Sum_probs=42.1
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
.++..|.||...+. .+.||.||+|..+||+.|++ +..+|.+ .|+|+.|..
T Consensus 14 ~~~~~C~vC~~~~~--~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g-~W~C~~C~~ 65 (92)
T 2e6r_A 14 IDSYICQVCSRGDE--DDKLLFCDGCDDNYHIFCLLPPLPEIPRG-IWRCPKCIL 65 (92)
T ss_dssp CCCCCCSSSCCSGG--GGGCEECTTTCCEECSSSSSSCCSSCCSS-CCCCHHHHH
T ss_pred cCCCCCccCCCcCC--CCCEEEcCCCCchhccccCCCCcccCCCC-CcCCccCcC
Confidence 45679999998764 36799999999999999999 5566776 999999975
No 46
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.18 E-value=5.7e-07 Score=77.52 Aligned_cols=49 Identities=31% Similarity=0.714 Sum_probs=40.8
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccCCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~~~ 700 (1112)
.+++.|.||...+ .||.||+|..+||+.|++ +..+|.+ .|+|..|....
T Consensus 6 ~~~~~C~vC~~~g-----~ll~CD~C~~~fH~~Cl~ppl~~~P~g-~W~C~~C~~~~ 56 (66)
T 1xwh_A 6 KNEDECAVCRDGG-----ELICCDGCPRAFHLACLSPPLREIPSG-TWRCSSCLQAT 56 (66)
T ss_dssp SCCCSBSSSSCCS-----SCEECSSCCCEECTTTSSSCCSSCCSS-CCCCHHHHHTC
T ss_pred CCCCCCccCCCCC-----CEEEcCCCChhhcccccCCCcCcCCCC-CeECccccCcc
Confidence 4567999999753 589999999999999999 5566766 99999998654
No 47
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=8.5e-07 Score=73.89 Aligned_cols=47 Identities=32% Similarity=0.787 Sum_probs=39.4
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
.+++.|.||... +.||.||.|..+||+.|++ +..+|.+ .|+|+.|..
T Consensus 7 ~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g-~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPKG-MWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS-----SCCEECSSSSCEECSSSSSSCCCSCCCS-SCCCHHHHC
T ss_pred CCCCCCccCCCC-----CeEEEcCCCCcceECccCCCCcCCCCCC-ceEChhhhC
Confidence 356799999975 3689999999999999999 5566766 999999974
No 48
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.12 E-value=8.7e-07 Score=84.89 Aligned_cols=55 Identities=22% Similarity=0.581 Sum_probs=41.7
Q ss_pred CccccccCCccc-----CCCeeEEccCCCccccccccCCc-----CCCCCCceecccccCCCCCCCCCcccCCC
Q 001263 649 DKCSVCHMDEEY-----QNNLFLQCDKCRMMVHARCYGEL-----EPVNGVLWLCNLCRPGAPEPPPPCCLCPV 712 (1112)
Q Consensus 649 ~~C~VC~~~~~~-----~~n~ll~Cd~C~~~VH~~CYG~~-----~~~~~~~W~C~~C~~~~~~~~~~C~LC~~ 712 (1112)
+.|.+|..++.. +...||.|++|...+|..|++.. .++.+ .|+|..|. .|.+|..
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~-~W~C~~C~--------~C~~C~~ 66 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTY-KWQCIECK--------SCILCGT 66 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHT-TCCCGGGC--------CCTTTTC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCC-ccCccccC--------ccCcccc
Confidence 589999876522 23589999999999999999964 23444 89999995 3666653
No 49
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.11 E-value=9.9e-07 Score=84.26 Aligned_cols=49 Identities=22% Similarity=0.510 Sum_probs=38.3
Q ss_pred cCccccccCCcc----cCCCeeEEccCCCccccccccCCc-----CCCCCCceeccccc
Q 001263 648 LDKCSVCHMDEE----YQNNLFLQCDKCRMMVHARCYGEL-----EPVNGVLWLCNLCR 697 (1112)
Q Consensus 648 ~~~C~VC~~~~~----~~~n~ll~Cd~C~~~VH~~CYG~~-----~~~~~~~W~C~~C~ 697 (1112)
..+|.+|...+. ...++||.|++|+..+|..|+++. .++.+ .|+|..|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~-~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKAL-RWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTS-CCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhcc-ccccccCC
Confidence 468999987642 234579999999999999999863 23444 89999997
No 50
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.10 E-value=1.3e-06 Score=75.13 Aligned_cols=47 Identities=23% Similarity=0.440 Sum_probs=38.6
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccCCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~~~ 700 (1112)
...|.||+..+ .||.||+|..+||+.|+. +..+|.+ .|+|..|+...
T Consensus 12 ~~~C~vC~~~~-----~ll~Cd~C~~~~H~~Cl~P~l~~~P~g-~W~C~~C~~~~ 60 (66)
T 2lri_C 12 GARCGVCGDGT-----DVLRCTHCAAAFHWRCHFPAGTSRPGT-GLRCRSCSGDV 60 (66)
T ss_dssp TCCCTTTSCCT-----TCEECSSSCCEECHHHHCTTTCCCCSS-SCCCTTTTTCC
T ss_pred CCCcCCCCCCC-----eEEECCCCCCceecccCCCccCcCCCC-CEECccccCCC
Confidence 46899998543 589999999999999996 4566776 89999998654
No 51
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.09 E-value=2.7e-06 Score=81.14 Aligned_cols=77 Identities=21% Similarity=0.410 Sum_probs=60.0
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCC-CCCceecccccCCCCCCCCCcccCCCCCC---CceecC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV-NGVLWLCNLCRPGAPEPPPPCCLCPVVGG---AMKPTT 721 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~-~~~~W~C~~C~~~~~~~~~~C~LC~~~gG---alK~t~ 721 (1112)
.+++.|.||...++. +.||.|+.|...+|..|+++...+ ....|+|+.|. .|.+|...+. .|.-..
T Consensus 5 ~~~~~C~~C~~~g~~--~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~--------~C~~C~~~~~~~~ll~Cd~ 74 (111)
T 2ysm_A 5 SSGANCAVCDSPGDL--LDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK--------VCQNCKQSGEDSKMLVCDT 74 (111)
T ss_dssp CCCSCBTTTCCCCCT--TTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC--------CCTTTCCCSCCTTEEECSS
T ss_pred CCCCCCcCCCCCCCC--cCCeECCCCCCCcChHHhCCccccccccCccCCcCC--------cccccCccCCCCCeeECCC
Confidence 456899999987642 468999999999999999975432 23489999997 5899987765 334445
Q ss_pred CCceeeeeccc
Q 001263 722 DGRWAHLACAI 732 (1112)
Q Consensus 722 ~g~WvHv~Cal 732 (1112)
..+++|+.|.-
T Consensus 75 C~~~yH~~Cl~ 85 (111)
T 2ysm_A 75 CDKGYHTFCLQ 85 (111)
T ss_dssp SCCEEEGGGSS
T ss_pred CCcHHhHHhcC
Confidence 78999999984
No 52
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.08 E-value=1.4e-06 Score=73.69 Aligned_cols=46 Identities=33% Similarity=0.803 Sum_probs=39.0
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
+++.|.||+..+ .||.||+|..+||+.|++ +..+|.+ .|+|+.|..
T Consensus 4 ~~~~C~vC~~~g-----~ll~Cd~C~~~fH~~Cl~ppl~~~p~g-~W~C~~C~~ 51 (60)
T 2puy_A 4 HEDFCSVCRKSG-----QLLMCDTCSRVYHLDCLDPPLKTIPKG-MWICPRCQD 51 (60)
T ss_dssp CCSSCTTTCCCS-----SCEECSSSSCEECGGGSSSCCSSCCCS-CCCCHHHHH
T ss_pred CCCCCcCCCCCC-----cEEEcCCCCcCEECCcCCCCcCCCCCC-ceEChhccC
Confidence 457999999753 699999999999999999 5566766 999999975
No 53
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=2.3e-06 Score=75.84 Aligned_cols=49 Identities=29% Similarity=0.656 Sum_probs=40.4
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
+..|.||+..+. .+.||.||+|..+||+.|++ +..+|.|..|+|..|..
T Consensus 26 ~c~C~vC~~~~~--~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 26 SCSCRVCGGKHE--PNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCSSSCCCCC--STTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCCcCcCCcCC--CCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 348999987643 35799999999999999999 55677766899999974
No 54
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.06 E-value=2.4e-06 Score=77.19 Aligned_cols=48 Identities=23% Similarity=0.619 Sum_probs=40.6
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCcccccccc--CCcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCY--GELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CY--G~~~~~~~~~W~C~~C~~~ 699 (1112)
++++.|.||+.++ .||.||.|..+||..|+ ++..+|.+ .|+|..|...
T Consensus 23 ~n~~~C~vC~~~g-----~LL~CD~C~~~fH~~Cl~PpL~~~P~g-~W~C~~C~~~ 72 (88)
T 1fp0_A 23 DSATICRVCQKPG-----DLVMCNQCEFCFHLDCHLPALQDVPGE-EWSCSLCHVL 72 (88)
T ss_dssp SSSSCCSSSCSSS-----CCEECTTSSCEECTTSSSTTCCCCCSS-SCCCCSCCCC
T ss_pred CCCCcCcCcCCCC-----CEEECCCCCCceecccCCCCCCCCcCC-CcCCccccCC
Confidence 4567999999764 58999999999999999 56677777 9999999853
No 55
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.05 E-value=1.9e-06 Score=73.03 Aligned_cols=47 Identities=28% Similarity=0.715 Sum_probs=39.3
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCC--cCCCCCCceecccccC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE--LEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~--~~~~~~~~W~C~~C~~ 698 (1112)
.++..|.||... +.||.||+|..+||+.|++. ..+|.+ .|+|..|..
T Consensus 9 ~~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~p~l~~~p~g-~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG-----GEIILCDTCPRAYHMVCLDPDMEKAPEG-KWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC-----SSEEECSSSSCEEEHHHHCTTCCSCCCS-SCCCTTGGG
T ss_pred CCCCCCccCCCC-----CcEEECCCCChhhhhhccCCCCCCCCCC-ceECccccc
Confidence 445799999874 36999999999999999996 355666 999999975
No 56
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.04 E-value=2.6e-06 Score=74.25 Aligned_cols=47 Identities=28% Similarity=0.665 Sum_probs=39.0
Q ss_pred ccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 650 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 650 ~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
.|.||+..+. .+.||.||+|..+||+.|++ +..+|.|..|+|..|..
T Consensus 20 ~C~~C~~~~~--~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQD--PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSC--GGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCC--CCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 6788887543 35799999999999999999 56677776999999975
No 57
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=97.96 E-value=3.8e-06 Score=74.37 Aligned_cols=47 Identities=28% Similarity=0.665 Sum_probs=38.5
Q ss_pred ccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 650 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 650 ~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
.|.||+..+. .+.||.||+|..++|+.|++ +..+|.+..|+|..|+.
T Consensus 28 ~C~vC~~~~d--~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQD--PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSC--GGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCC--CcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 7888887653 36799999999999999999 56778874499999975
No 58
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.92 E-value=1.1e-05 Score=70.47 Aligned_cols=50 Identities=26% Similarity=0.695 Sum_probs=40.4
Q ss_pred cCcCccccccCCcccCCCeeEEccC--CC-ccccccccCCcCCCCCCceecccccCCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDK--CR-MMVHARCYGELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~--C~-~~VH~~CYG~~~~~~~~~W~C~~C~~~~ 700 (1112)
.+..+| +|+.... ..||.||+ |. ..||..|+|+..+|.+ .|+|+.|....
T Consensus 14 ~~~~~C-~C~~~~~---g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g-~w~Cp~C~~~~ 66 (71)
T 1wen_A 14 NEPTYC-LCHQVSY---GEMIGCDNPDCSIEWFHFACVGLTTKPRG-KWFCPRCSQES 66 (71)
T ss_dssp TSCCCS-TTCCCSC---SSEECCSCSSCSCCCEETTTTTCSSCCSS-CCCCTTTSSCS
T ss_pred CCCCEE-ECCCCCC---CCEeEeeCCCCCCccEecccCCcCcCCCC-CEECCCCCccc
Confidence 345677 8988643 46999999 77 5999999999888876 89999998654
No 59
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.76 E-value=2.4e-05 Score=71.40 Aligned_cols=50 Identities=26% Similarity=0.695 Sum_probs=40.0
Q ss_pred cCcCccccccCCcccCCCeeEEccC--CC-ccccccccCCcCCCCCCceecccccCCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDK--CR-MMVHARCYGELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~--C~-~~VH~~CYG~~~~~~~~~W~C~~C~~~~ 700 (1112)
.+..+| +|+.... ..||.||+ |. ..||..|.|+...|.+ .|+|+.|....
T Consensus 34 ~e~~yC-iC~~~~~---g~MI~CD~~dC~~~WfH~~CVgl~~~p~g-~W~Cp~C~~~~ 86 (91)
T 1weu_A 34 NEPTYC-LCHQVSY---GEMIGCDNPDCSIEWFHFACVGLTTKPRG-KWFCPRCSQES 86 (91)
T ss_dssp CCCBCS-TTCCBCC---SCCCCCSCSSCSCCCCCSTTTTCSSCCCS-SCCCTTTCCCC
T ss_pred CCCcEE-ECCCCCC---CCEeEecCCCCCCCCEecccCCcCcCCCC-CEECcCccCcC
Confidence 344577 9988653 46999999 66 6899999999887776 89999998654
No 60
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.72 E-value=9.7e-06 Score=68.42 Aligned_cols=46 Identities=28% Similarity=0.728 Sum_probs=37.5
Q ss_pred cCccccccCCcccCCCeeEEccC--CC-ccccccccCCcCCCCCCceecccccC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDK--CR-MMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~--C~-~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
...| ||+.... ..||.||+ |. ..||..|+|+..+|.+ .|+|+.|..
T Consensus 10 ~~~C-~C~~~~~---g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g-~w~C~~C~~ 58 (60)
T 2vnf_A 10 PTYC-LCHQVSY---GEMIGCDNPDCSIEWFHFACVGLTTKPRG-KWFCPRCSQ 58 (60)
T ss_dssp CEET-TTTEECC---SEEEECSCTTCSSCEEETGGGTCSSCCSS-CCCCHHHHC
T ss_pred CCEE-ECCCcCC---CCEEEeCCCCCCCceEehhcCCCCcCCCC-CEECcCccC
Confidence 3466 9987642 47999999 55 6899999999888876 899999974
No 61
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.71 E-value=1e-05 Score=67.99 Aligned_cols=47 Identities=26% Similarity=0.671 Sum_probs=38.3
Q ss_pred CcCccccccCCcccCCCeeEEccC--CC-ccccccccCCcCCCCCCceecccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDK--CR-MMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~--C~-~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
+...| +|+.... ..||.||+ |. ..||..|.|+...|.+ .|+|+.|..
T Consensus 8 e~~yC-~C~~~~~---g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~-~w~Cp~C~~ 57 (59)
T 3c6w_A 8 EPTYC-LCHQVSY---GEMIGCDNPDCPIEWFHFACVDLTTKPKG-KWFCPRCVQ 57 (59)
T ss_dssp CCEET-TTTEECC---SEEEECSCTTCSSCEEETGGGTCSSCCSS-CCCCHHHHC
T ss_pred CCcEE-ECCCCCC---CCeeEeeCCCCCCCCEecccCCcccCCCC-CEECcCccC
Confidence 44566 9987542 47999999 77 5999999999888876 899999974
No 62
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.69 E-value=1.3e-05 Score=70.82 Aligned_cols=51 Identities=22% Similarity=0.623 Sum_probs=40.1
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCC-CCceecccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVN-GVLWLCNLCRPG 699 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~-~~~W~C~~C~~~ 699 (1112)
+...|.||+.... +..||.||+|...||..|+|+...+. ...|+|+.|...
T Consensus 17 ~~~~C~~C~~~~~--~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 17 QIWICPGCNKPDD--GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp EEECBTTTTBCCS--SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred CCcCCCCCCCCCC--CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 3458999988753 34699999999999999999865432 248999999753
No 63
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.66 E-value=1.5e-05 Score=67.72 Aligned_cols=48 Identities=23% Similarity=0.551 Sum_probs=38.4
Q ss_pred CcCccccccCCcccCCCeeEEccCCC---ccccccccCCcCCCCCCceecccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCR---MMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~---~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
+...| +|+.... ..||.||+|+ ..||..|.|+...|.+ .|+|+.|...
T Consensus 10 e~~yC-~C~~~~~---g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~-~w~Cp~C~~~ 60 (62)
T 2g6q_A 10 EPTYC-LCNQVSY---GEMIGCDNEQCPIEWFHFSCVSLTYKPKG-KWYCPKCRGD 60 (62)
T ss_dssp CCEET-TTTEECC---SEEEECSCTTCSSCEEETGGGTCSSCCSS-CCCCHHHHTC
T ss_pred CCcEE-ECCCCCC---CCeeeeeCCCCCcccEecccCCcCcCCCC-CEECcCcccC
Confidence 34566 9988532 3799999955 8999999999887776 9999999753
No 64
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.63 E-value=3.9e-05 Score=71.35 Aligned_cols=48 Identities=27% Similarity=0.764 Sum_probs=37.2
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
..| ||+..+. ++.||.|++|...+|..|+|+......+.|+|..|...
T Consensus 29 vrC-iC~~~~~--~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 29 TRC-ICGFTHD--DGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp CCC-TTSCCSC--SSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred EEe-ECCCccC--CCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 456 8987653 35799999999999999999864332347999999753
No 65
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=97.61 E-value=3.1e-05 Score=80.45 Aligned_cols=48 Identities=31% Similarity=0.731 Sum_probs=39.5
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccCCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~~~ 700 (1112)
+++.|.||+.++ .||.||+|..++|..|++ +..+|.| .|+|..|....
T Consensus 3 ~~~~C~~C~~~g-----~ll~Cd~C~~~~H~~C~~p~l~~~p~~-~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNGG-----ELLCCEKCPKVFHLSCHVPTLTNFPSG-EWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCCS-----SCEECSSSSCEECTTTSSSCCSSCCSS-CCCCTTTSCSS
T ss_pred CCCccccCCCCC-----eeeecCCCCcccCccccCCCCCCCCCC-CEECccccCcc
Confidence 467999998653 489999999999999996 4456666 89999998754
No 66
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.61 E-value=3.6e-05 Score=81.46 Aligned_cols=49 Identities=33% Similarity=0.722 Sum_probs=40.3
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccCCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~~~ 700 (1112)
.+++.|.||+.++ .||.||+|..++|..|++ +..+|.| .|+|..|....
T Consensus 5 ~~~~~C~~C~~~g-----~ll~Cd~C~~~~H~~Cl~p~l~~~p~~-~W~C~~C~~~~ 55 (207)
T 3u5n_A 5 PNEDWCAVCQNGG-----DLLCCEKCPKVFHLTCHVPTLLSFPSG-DWICTFCRDIG 55 (207)
T ss_dssp SSCSSBTTTCCCE-----EEEECSSSSCEECTTTSSSCCSSCCSS-CCCCTTTSCSS
T ss_pred CCCCCCCCCCCCC-----ceEEcCCCCCccCCccCCCCCCCCCCC-CEEeCceeCcc
Confidence 3457999998765 499999999999999996 4456766 89999998754
No 67
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.60 E-value=2.2e-05 Score=71.43 Aligned_cols=47 Identities=23% Similarity=0.577 Sum_probs=38.2
Q ss_pred CcCccccccCCcccCCCeeEEccCCC---ccccccccCCcCCCCCCceeccc-ccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCR---MMVHARCYGELEPVNGVLWLCNL-CRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~---~~VH~~CYG~~~~~~~~~W~C~~-C~~ 698 (1112)
+..+| ||..... +.||.||+|+ ..||..|+|+..+|.+ .|+|+. |..
T Consensus 25 ~~~yC-iC~~~~~---g~MI~CD~c~C~~eWfH~~CVgl~~~p~~-~W~Cp~cC~~ 75 (90)
T 2jmi_A 25 EEVYC-FCRNVSY---GPMVACDNPACPFEWFHYGCVGLKQAPKG-KWYCSKDCKE 75 (90)
T ss_dssp CSCCS-TTTCCCS---SSEECCCSSSCSCSCEETTTSSCSSCTTS-CCCSSHHHHH
T ss_pred CCcEE-EeCCCCC---CCEEEecCCCCccccCcCccCCCCcCCCC-CccCChhhcc
Confidence 34567 9987543 3699999977 7899999999888876 999999 974
No 68
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.59 E-value=3.7e-05 Score=66.49 Aligned_cols=50 Identities=20% Similarity=0.567 Sum_probs=39.5
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
+...| ||+.... +..||+||.|...+|..|.|+...+..+.|+|+.|...
T Consensus 18 ~~~~C-iC~~~~~--~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 18 GLVTC-FCMKPFA--GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp TCCCS-TTCCCCT--TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred CceEe-ECCCcCC--CCCEEECCCCCccccccccCcCcccCCCcEECCCCCCC
Confidence 34578 9998653 45799999999999999999876433358999999753
No 69
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.58 E-value=2.9e-05 Score=82.09 Aligned_cols=48 Identities=27% Similarity=0.629 Sum_probs=36.4
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
..|.+|+..+. .+.||.||+|..++|+.|++ +..+|.|..|+|+.|..
T Consensus 175 c~C~vC~~~~~--~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQD--PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC----CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCC--CCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 48999987643 35799999999999999999 45667666899999974
No 70
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=97.46 E-value=4.6e-05 Score=79.40 Aligned_cols=46 Identities=24% Similarity=0.603 Sum_probs=38.8
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~~ 699 (1112)
++.|.||+.++ .||.||+|..++|..|+. +..+|.| .|+|..|...
T Consensus 2 ~~~C~~C~~~g-----~ll~Cd~C~~~~H~~Cl~p~l~~~p~g-~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKPG-----DLVMCNQCEFCFHLDCHLPALQDVPGE-EWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCCS-----SCCCCTTTCCBCCSTTSTTCCSSCCCT-TCCTTTTSCS
T ss_pred CCcCccCCCCC-----ceeECCCCCchhccccCCCCcccCCCC-CCCCcCccCC
Confidence 46899999764 489999999999999994 5567777 8999999864
No 71
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.46 E-value=4.4e-05 Score=73.01 Aligned_cols=47 Identities=34% Similarity=0.847 Sum_probs=38.8
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
..|.||+..+ +.+.||.||+|..+||+.|++ +..+|.+ .|+|..|..
T Consensus 59 ~~C~~C~~~~--~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g-~W~C~~C~~ 107 (114)
T 2kwj_A 59 KSCILCGTSE--NDDQLLFCDDCDRGYHMYCLNPPVAEPPEG-SWSCHLCWE 107 (114)
T ss_dssp CCCTTTTCCT--TTTTEEECSSSCCEEETTTSSSCCSSCCSS-CCCCHHHHH
T ss_pred CccCcccccC--CCCceEEcCCCCccccccccCCCccCCCCC-CeECccccc
Confidence 3788998754 236799999999999999999 5567776 899999964
No 72
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.32 E-value=0.00011 Score=69.90 Aligned_cols=48 Identities=31% Similarity=0.858 Sum_probs=38.6
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
.+|.||+..+. +.+.||.||+|..+||..|+. +..+|++ .|+|..|+.
T Consensus 62 ~~C~vC~~~~~-~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~-~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGK-NADNMLFCDSCDRGFHMECCDPPLTRMPKG-MWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCC-TTCCCEECTTTCCEECGGGCSSCCSSCCSS-CCCCTTTSC
T ss_pred CccccccCcCC-CccceEEcCCCCCeeecccCCCCCCCCCCC-CeECCCCCC
Confidence 37899987542 335799999999999999995 5567777 899999974
No 73
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.28 E-value=0.00012 Score=69.64 Aligned_cols=46 Identities=28% Similarity=0.629 Sum_probs=38.1
Q ss_pred ccccccCCcccCCCeeEEccCCCccccccccC--CcCCCCCCceecccccC
Q 001263 650 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 650 ~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG--~~~~~~~~~W~C~~C~~ 698 (1112)
.|.||+..+. .+.||.|+.|..++|..|+. +..+|.+ .|+|..|..
T Consensus 56 ~C~~C~~~~~--~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g-~W~C~~C~~ 103 (111)
T 2ysm_A 56 VCQNCKQSGE--DSKMLVCDTCDKGYHTFCLQPVMKSVPTN-GWKCKNCRI 103 (111)
T ss_dssp CCTTTCCCSC--CTTEEECSSSCCEEEGGGSSSCCSSCCSS-CCCCHHHHC
T ss_pred cccccCccCC--CCCeeECCCCCcHHhHHhcCCccccCCCC-CcCCcCCcC
Confidence 7888987653 35799999999999999998 4456666 999999975
No 74
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=97.23 E-value=0.00047 Score=57.41 Aligned_cols=45 Identities=33% Similarity=0.364 Sum_probs=41.8
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCcccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 285 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l 285 (1112)
.||-.|.-.||.|+.||++.|+++|+.+....|.|-||.+|.|.-
T Consensus 11 ~vgd~VmaRW~Gd~~yYparI~Si~s~~~~Y~V~fKdgT~e~L~~ 55 (66)
T 2l8d_A 11 ADGEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKDGTELALKE 55 (66)
T ss_dssp CSSCEEEEECTTSSCEEEEEEEEEETTTTEEEEEETTSCEEEEEG
T ss_pred ecCCEEEEEcCCCccceEEEEEEeccCCceEEEEecCCCEEeech
Confidence 389999999999999999999999999999999999999988764
No 75
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.19 E-value=0.00058 Score=56.99 Aligned_cols=44 Identities=32% Similarity=0.385 Sum_probs=41.5
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCcccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 285 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l 285 (1112)
||-.|.-.||.|+.||+++|+++|..+....|.|-||.+|.|.-
T Consensus 15 vgd~VmaRW~Gd~~yYparItSits~~~~Y~VkfKdgT~e~L~~ 58 (68)
T 2dig_A 15 DGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKE 58 (68)
T ss_dssp SSCEEEEECTTTCCEEEEEEEEEETTTTEEEEECTTSCEEEEET
T ss_pred cCCEEEEEccCCccceEEEEEEeccCCceEEEEecCCCEEEech
Confidence 89999999999999999999999999999999999999888754
No 76
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.09 E-value=0.00032 Score=59.85 Aligned_cols=53 Identities=19% Similarity=0.508 Sum_probs=41.2
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCC--CCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~--~~~~W~C~~C~~~ 699 (1112)
++..+|.+|..... ++..||+||.|...||..|.|+...+ ....|+|..|...
T Consensus 4 ~e~~~C~~C~~~~~-~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYA-ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCC-SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccC-CCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 34578999988653 23579999999999999999986543 1248999999864
No 77
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.97 E-value=0.00034 Score=62.13 Aligned_cols=50 Identities=24% Similarity=0.592 Sum_probs=39.3
Q ss_pred cCccccccCCcccCCCeeEEcc--CCCccccccccCCcCCCC------CCceecccccCCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCD--KCRMMVHARCYGELEPVN------GVLWLCNLCRPGA 700 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd--~C~~~VH~~CYG~~~~~~------~~~W~C~~C~~~~ 700 (1112)
..+| ||+.... +..||.|| .|...+|..|+|+...+. ...|+|..|....
T Consensus 16 ~~~C-iC~~~~~--~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 16 KVRC-VCGNSLE--TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCC-SSCCCCC--CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CEEe-ECCCcCC--CCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 4577 8998743 35899999 999999999999876442 2489999998643
No 78
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.94 E-value=0.00038 Score=60.20 Aligned_cols=47 Identities=26% Similarity=0.696 Sum_probs=35.5
Q ss_pred CccccccCCcccCCCeeEEccC--CCccccccccCCcCCCCC-----CceecccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDK--CRMMVHARCYGELEPVNG-----VLWLCNLCRP 698 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~--C~~~VH~~CYG~~~~~~~-----~~W~C~~C~~ 698 (1112)
..| ||+...+ +..||.||+ |...+|..|+|+...+.. +.|+|..|+.
T Consensus 11 v~C-~C~~~~~--~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 11 VRC-ICSSTMV--NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp ECC-TTCCCSC--CSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred EEe-ECCCCcC--CCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 456 8987543 347999995 999999999998654322 3699999974
No 79
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.92 E-value=0.0004 Score=56.70 Aligned_cols=47 Identities=17% Similarity=0.494 Sum_probs=36.8
Q ss_pred ccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccC
Q 001263 650 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 650 ~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
+=++|+.... +..||.||+|..-+|..|.|+...+..+.|+|+.|..
T Consensus 5 ~~C~C~~~~~--~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTCFCMKPFA--GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp BCSTTCCBCT--TCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred eEEEeCCcCC--CCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 3447987543 4589999999999999999987643335899999964
No 80
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.89 E-value=0.00027 Score=61.47 Aligned_cols=45 Identities=27% Similarity=0.654 Sum_probs=36.8
Q ss_pred CccccccCCcccCCCeeEEccCCC---ccccccccCCcCCCCCCceecccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCR---MMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~---~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
.+| +|..... ..||.||+|+ ..||..|.|+...+.+ .|+|+.|..
T Consensus 7 ~yC-~C~~~~~---g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~-~w~Cp~C~~ 54 (70)
T 1x4i_A 7 GYC-ICNQVSY---GEMVGCDNQDCPIEWFHYGCVGLTEAPKG-KWYCPQCTA 54 (70)
T ss_dssp CCS-TTSCCCC---SSEECCSCTTCSCCCEEHHHHTCSSCCSS-CCCCHHHHH
T ss_pred eEE-EcCCCCC---CCEeEeCCCCCCccCCcccccccCcCCCC-CEECCCCCc
Confidence 455 6987642 3799999985 7999999999887766 999999974
No 81
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.81 E-value=0.0015 Score=57.28 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=39.7
Q ss_pred CccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccc
Q 001263 240 AFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 286 (1112)
Q Consensus 240 ~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~ 286 (1112)
--||.+|.-.|. |+.||.|+|++.+.. +...|.|+||..|.|.+.
T Consensus 10 ~kvGd~clA~ws-Dg~~Y~A~I~~v~~~-~~~~V~f~Dyn~e~v~~~ 54 (74)
T 2equ_A 10 FKAGEEVLARWT-DCRYYPAKIEAINKE-GTFTVQFYDGVIRCLKRM 54 (74)
T ss_dssp CCTTCEEEEECS-SSSEEEEEEEEESTT-SSEEEEETTSCEEEECGG
T ss_pred CCCCCEEEEECC-CCCEEEEEEEEECCC-CEEEEEEecCCeEEecHH
Confidence 348999999999 999999999999865 789999999988887654
No 82
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.79 E-value=0.00087 Score=58.56 Aligned_cols=50 Identities=26% Similarity=0.567 Sum_probs=37.9
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCCcCC-CCCCceecccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEP-VNGVLWLCNLCRPG 699 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~-~~~~~W~C~~C~~~ 699 (1112)
..+| +|+.... ++..||+||.|...+|..|.|+... .....|+|..|...
T Consensus 16 ~~~C-~C~~~~~-~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 16 KVDC-KCGTKDD-DGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp EECC-TTCCCSC-CSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred ceEe-eCCCccC-CCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 3578 7988642 2346999999999999999998642 22348999999753
No 83
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=96.78 E-value=0.0012 Score=61.91 Aligned_cols=106 Identities=20% Similarity=0.289 Sum_probs=71.0
Q ss_pred CCCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccccceEEEEecchhhhhhhhcccccCCCCCCCC
Q 001263 238 PKAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYD 317 (1112)
Q Consensus 238 ~~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~~ 317 (1112)
+.+++|.||-..|++|..||.|+|+. +...++.+|++|||++-.|. .++|-+
T Consensus 3 ~~~~~G~rV~AkWsdn~~yYpG~V~~-~~~~~ky~V~FdDg~~~~v~--~k~iiv------------------------- 54 (123)
T 2g3r_A 3 MNSFVGLRVVAKWSSNGYFYSGKITR-DVGAGKYKLLFDDGYECDVL--GKDILL------------------------- 54 (123)
T ss_dssp --CCTTCEEEEECTTTCCEEEEEEEE-EEETTEEEEEETTSCEEEEE--GGGEEC-------------------------
T ss_pred CccccceEEEEEeccCCcCcccEEEE-eccCCeEEEEEcCCCeeEee--cceEEE-------------------------
Confidence 46899999999999888999999999 47889999999999987665 222221
Q ss_pred chhHHhhhcccccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccc
Q 001263 318 YDEMVVLAASLDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVIS 395 (1112)
Q Consensus 318 ~de~~~~a~~~~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~ 395 (1112)
+..+.+|.-|.|-..+==.=||+|..-. +..++-.|+|.- +...-|++.+++..
T Consensus 55 -------------~d~ip~g~~V~A~teddy~~~GiI~~~k---------~~~~e~~Y~Ve~--dG~~~~~~~~~viL 108 (123)
T 2g3r_A 55 -------------CDPIPLDTEVTALSEDEYFSAGVVKGHR---------KESGELYYSIEK--EGQRKWYKRMAVIL 108 (123)
T ss_dssp -------------CSSCCTTCEEEEECTTSCEEEEEEEEEE---------EETTEEEEEEEE--TTEEEEEEGGGEEB
T ss_pred -------------ecccCCCcEEEEeecCccccceEEEEEe---------cCCCeEEEEEEe--CCcEEEEEeeeEEe
Confidence 1112245555555544333466665421 223445588983 66788888877754
No 84
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=96.73 E-value=0.0025 Score=54.50 Aligned_cols=47 Identities=21% Similarity=0.319 Sum_probs=41.6
Q ss_pred CCCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccc
Q 001263 238 PKAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 286 (1112)
Q Consensus 238 ~~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~ 286 (1112)
|.=.||.+|..-| .|..||.|+|++.+.. +...|.|+||..|.|.+.
T Consensus 5 ~~~~vGd~vmArW-~D~~yYpA~I~si~~~-~~Y~V~F~dG~~etvk~~ 51 (67)
T 3p8d_A 5 SEFQINEQVLACW-SDCRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI 51 (67)
T ss_dssp CCCCTTCEEEEEC-TTSCEEEEEEEEECTT-SEEEEEETTSCEEEEEGG
T ss_pred cccccCCEEEEEc-CCCCEeeEEEEEECCC-CeEEEEEeCCceEEEeHH
Confidence 3445999999999 9999999999999987 679999999999988763
No 85
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.69 E-value=0.00044 Score=61.12 Aligned_cols=49 Identities=29% Similarity=0.687 Sum_probs=38.2
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccCCcCCC------CCCceecccccCCC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV------NGVLWLCNLCRPGA 700 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~------~~~~W~C~~C~~~~ 700 (1112)
.+| +|+.... +..||.||.|...||..|.|+...+ ....|+|..|....
T Consensus 17 ~~C-~C~~~~~--~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 17 LYC-ICRQPHN--NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCS-TTCCCCC--SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CEE-ECCCccC--CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 456 9998754 3579999999999999999986532 23489999997543
No 86
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=96.69 E-value=0.0024 Score=53.47 Aligned_cols=45 Identities=27% Similarity=0.496 Sum_probs=41.7
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccC-CCccccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 286 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Ydd-g~~e~l~l~ 286 (1112)
+|..|...|..|+.||.|+|++.++..+...|.|.| |..|.+.++
T Consensus 6 ~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~DYGn~e~v~~~ 51 (59)
T 1mhn_A 6 VGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLS 51 (59)
T ss_dssp TTCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETTTTEEEEEEGG
T ss_pred cCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEcCCCEEEEcHH
Confidence 799999999999999999999999888999999999 999888775
No 87
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.68 E-value=0.00066 Score=60.44 Aligned_cols=50 Identities=22% Similarity=0.509 Sum_probs=38.5
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccCCcCCCC--CCceecccccCCC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVN--GVLWLCNLCRPGA 700 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~--~~~W~C~~C~~~~ 700 (1112)
.+| +|..... ++..||+||.|...||..|.|+...+. ...|+|..|....
T Consensus 13 ~~C-~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 13 VYC-LCRQPYN-VNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCS-TTSCSCC-SSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred cEE-EcCCccC-CCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 456 9988653 245799999999999999999865321 2489999998643
No 88
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=96.60 E-value=0.00058 Score=55.75 Aligned_cols=47 Identities=21% Similarity=0.497 Sum_probs=36.0
Q ss_pred ccccccCCcccCCCeeEEcc-CCCccccccccCCcCCC-CCCceeccccc
Q 001263 650 KCSVCHMDEEYQNNLFLQCD-KCRMMVHARCYGELEPV-NGVLWLCNLCR 697 (1112)
Q Consensus 650 ~C~VC~~~~~~~~n~ll~Cd-~C~~~VH~~CYG~~~~~-~~~~W~C~~C~ 697 (1112)
.|.+|..... ++..+|.|| .|..-||..|.|+...+ ....|+|+.|+
T Consensus 4 ~cc~C~~p~~-~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCK-DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCC-TTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccC-CCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 5888988753 345799999 89999999999986532 12489999985
No 89
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=96.57 E-value=0.0031 Score=53.72 Aligned_cols=46 Identities=22% Similarity=0.423 Sum_probs=42.0
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccC-CCccccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 286 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Ydd-g~~e~l~l~ 286 (1112)
-||..|...|..|+.||.|+|++.+...+...|.|.| |..|.+.++
T Consensus 10 ~vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvdYGn~e~V~~~ 56 (64)
T 4a4f_A 10 KVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL 56 (64)
T ss_dssp CTTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETTTTEEEEEEGG
T ss_pred CCCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEecCCEEEEeHH
Confidence 4899999999999999999999999988899999998 888888764
No 90
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=96.54 E-value=0.0035 Score=55.82 Aligned_cols=47 Identities=21% Similarity=0.319 Sum_probs=41.3
Q ss_pred CCCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccc
Q 001263 238 PKAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 286 (1112)
Q Consensus 238 ~~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~ 286 (1112)
..=.||.+|.--| .|..||.|+|++.+.. +...|.|+||..|.|...
T Consensus 20 ~~f~vGd~VlArW-~D~~yYPAkI~sV~~~-~~YtV~F~DG~~etvk~~ 66 (85)
T 3qii_A 20 SEFQINEQVLACW-SDCRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI 66 (85)
T ss_dssp -CCCTTCEEEEEC-TTSCEEEEEEEEECTT-SEEEEEETTSCEEEEEGG
T ss_pred cccccCCEEEEEe-CCCCEeeEEEEEECCC-CeEEEEEeCCCeEEecHH
Confidence 3456999999999 9999999999999977 679999999999988763
No 91
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=96.52 E-value=0.00097 Score=62.85 Aligned_cols=75 Identities=19% Similarity=0.352 Sum_probs=51.0
Q ss_pred CCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCC----E-EEeeCCCcccccccccccccc
Q 001263 332 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD----F-ARINVKQVISFLKGLLSSFHL 406 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~----~-awv~~~~l~~f~~~~~~~~~~ 406 (1112)
..|..|-|||.|+.-||.|||.|-+.. +..+...|.|...+- . --|+.+.|+||+=+.++.+..
T Consensus 3 ~~~e~GmlVW~K~q~yPfWPAVVKSV~-----------r~ekkA~VL~Ie~~m~~ekrGi~V~LrrLK~fDC~ek~~L~~ 71 (134)
T 3pmi_A 3 RSFEVGMLVWHKHKKYPFWPAVVKSVR-----------QRDKKASVLYIEGHMNPKMKGFTVSLKSLKHFDCKEKQTLLN 71 (134)
T ss_dssp -CCCTTCEEEECCTTSCCEEEEEEEEE-----------GGGTEEEEEECCSSCCTTSCCEEEEGGGCEETTSTTHHHHHH
T ss_pred cccccceEEEEEeccCCCcchheeeee-----------eccceEEEEEEeCCCCcccCceEeEcccCCCCChHhHHHHHH
Confidence 358899999999999999999996531 223446788887543 1 568999999998543444444
Q ss_pred cCChHHHHHHHH
Q 001263 407 KCKKPRFTQSLE 418 (1112)
Q Consensus 407 k~k~~~f~~Al~ 418 (1112)
+.+ +.|.++|.
T Consensus 72 rAr-e~Y~qsi~ 82 (134)
T 3pmi_A 72 QAR-EDFNQDIG 82 (134)
T ss_dssp HHT-TTCHHHHH
T ss_pred HHH-HHhccchh
Confidence 432 44555543
No 92
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=96.50 E-value=0.00051 Score=58.78 Aligned_cols=49 Identities=22% Similarity=0.690 Sum_probs=38.2
Q ss_pred CcCccccccCCcccCCCeeEEcc-CCCccccccccCCcC--------CCCCCceeccccc
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCD-KCRMMVHARCYGELE--------PVNGVLWLCNLCR 697 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd-~C~~~VH~~CYG~~~--------~~~~~~W~C~~C~ 697 (1112)
....|.+|..... ++..+|.|| .|...||..|.|+.. .+.+ .|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~-~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~-~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVN-DDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASA-VWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCC-TTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTE-EECCHHHH
T ss_pred CcCcCccCCCccC-CCCCeEecccCccccCchhccCCCHHHHHHhhccCCC-cEECcCcc
Confidence 3468999998753 345799999 999999999999864 2444 89999996
No 93
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=96.46 E-value=0.0036 Score=51.36 Aligned_cols=45 Identities=29% Similarity=0.458 Sum_probs=39.3
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccC-CCccccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 286 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Ydd-g~~e~l~l~ 286 (1112)
+|..|-..|..|+.||.|+|++.+...+...|.|.| |..|.+.++
T Consensus 4 ~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~fvDYGn~e~v~~~ 49 (54)
T 3s6w_A 4 PGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLS 49 (54)
T ss_dssp TTCEEEEEETTTTEEEEEEEEEC--CCSEEEEEETTTCCEEEEEGG
T ss_pred CCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEccCCeEEEeHH
Confidence 789999999999999999999999888889999987 899888775
No 94
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=96.36 E-value=0.0053 Score=55.65 Aligned_cols=46 Identities=26% Similarity=0.461 Sum_probs=41.6
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccC-CCccccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 286 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Ydd-g~~e~l~l~ 286 (1112)
-||..|...|..|+.||.|+|++.+...+...|.|.| |..|.|.|+
T Consensus 12 kvGd~C~A~ys~Dg~wYrA~I~~i~~~~~~~~V~fiDYGN~E~V~~~ 58 (88)
T 1g5v_A 12 KVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLS 58 (88)
T ss_dssp CSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEEETTTCCEEEEEGG
T ss_pred CCCCEEEEEECCCCCEEEEEEEEecCCCCEEEEEEecCCCEEEEcHH
Confidence 3899999999999999999999999988899999987 788888764
No 95
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=96.28 E-value=0.0013 Score=61.78 Aligned_cols=50 Identities=24% Similarity=0.691 Sum_probs=39.6
Q ss_pred CccccccCCcccCCCeeEEcc-CCCccccccccCCcC--------CCCCCceecccccCCC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCD-KCRMMVHARCYGELE--------PVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd-~C~~~VH~~CYG~~~--------~~~~~~W~C~~C~~~~ 700 (1112)
..|.+|...... +..+|+|+ .|...||..|.|+.. .++ ..|+|+.|....
T Consensus 4 ~~C~iC~~p~~~-~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~-~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVND-DQDAILCEASCQKWFHRECTGMTESAYGLLTTEAS-AVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCT-TSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTT-EEECCHHHHHTT
T ss_pred CCCCCCCCccCC-CCCEEEecCCcccccccccCCcCHHHHHhhccCCC-CCEECccccCcC
Confidence 479999987533 34699998 999999999999864 234 489999998643
No 96
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=95.21 E-value=0.00077 Score=59.80 Aligned_cols=43 Identities=23% Similarity=0.387 Sum_probs=38.5
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 286 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~ 286 (1112)
||.+|-..|. |+.||.|+|++.+.. +...|.|+||..|.|.++
T Consensus 9 vGd~clAkws-Dg~wY~A~I~~v~~~-~~y~V~F~DGn~E~V~~s 51 (81)
T 2ldm_A 9 INEQVLASWS-DSRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI 51 (81)
Confidence 7999999999 999999999999854 579999999999988875
No 97
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=96.04 E-value=0.0015 Score=57.48 Aligned_cols=49 Identities=22% Similarity=0.591 Sum_probs=37.7
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccCCcCCC--CCCceecccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRP 698 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~--~~~~W~C~~C~~ 698 (1112)
.+-+||+.... ++..||+||.|...+|..|.|+...+ ..+.|+|..|..
T Consensus 10 ~~yCiC~~~~~-~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 10 PVYCVCRLPYD-VTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 60 (75)
T ss_dssp CEETTTTEECC-TTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHH
T ss_pred eeEEECCCcCC-CCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcc
Confidence 35558987532 34579999999999999999987643 234799999975
No 98
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=96.00 E-value=0.00089 Score=68.71 Aligned_cols=51 Identities=25% Similarity=0.700 Sum_probs=39.0
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcCCC--CCCceecccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRPG 699 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~--~~~~W~C~~C~~~ 699 (1112)
+...| +|+.... ++..+|.||.|...+|..|.|+...+ ..+.|+|..|...
T Consensus 7 ~~~~C-~C~~~~~-~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 7 TKLYC-ICKTPED-ESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CCEET-TTTEECC-TTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCcEe-eCCCCCC-CCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 44688 9988643 23569999999999999999975432 2348999999853
No 99
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=95.63 E-value=0.0069 Score=71.41 Aligned_cols=44 Identities=18% Similarity=0.248 Sum_probs=35.9
Q ss_pred CccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCCC
Q 001263 1021 SIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFF 1068 (1112)
Q Consensus 1021 n~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~~ 1068 (1112)
-++-++||+|+|||.+.. + ...+.++|.|+|++||||+++|+..
T Consensus 221 P~~D~~NH~~~~~~~~~~---~-~~~~~~~a~~~i~~Geei~~~YG~~ 264 (449)
T 3qxy_A 221 PAADILNHLANHNANLEY---S-ANCLRMVATQPIPKGHEIFNTYGQM 264 (449)
T ss_dssp TTGGGCEECSSCSEEEEE---C-SSEEEEEESSCBCTTCEEEECCSSC
T ss_pred ecHHHhcCCCCCCeEEEE---e-CCeEEEEECCCcCCCchhhccCCCC
Confidence 356689999999986532 3 2478999999999999999999863
No 100
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=95.63 E-value=0.017 Score=48.74 Aligned_cols=43 Identities=14% Similarity=0.255 Sum_probs=40.9
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCcccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 285 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l 285 (1112)
||..|...| .|..||.|+|+.-|..++.-.|+|.||.+-|+..
T Consensus 16 vGddVLA~w-tDGl~Y~gtI~~V~~~~gtC~V~F~D~s~~w~~~ 58 (66)
T 2eqj_A 16 EGQDVLARW-SDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLW 58 (66)
T ss_dssp TTCEEEEEC-TTSCEEEEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCCEEEEEE-ccCcEEEeEEEEEccCCcEEEEEEccCCEEEEEe
Confidence 899999999 9999999999999999999999999999888765
No 101
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=95.61 E-value=0.011 Score=57.80 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=71.8
Q ss_pred CCCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccccceEEEEecchhhhhhhhcccccCCCCCCCC
Q 001263 238 PKAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYD 317 (1112)
Q Consensus 238 ~~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~~ 317 (1112)
+.++||.||--.|.+++-||.|+|+.+ ....+..|++|||.+-.|.... +-+.
T Consensus 7 ~~~~iG~rVfArWsd~~yyYpG~V~~~-~~~~~Y~V~FdDG~~k~v~~~d--ivv~------------------------ 59 (156)
T 1ssf_A 7 GNSFVGLRVVAKWSSNGYFYSGKITRD-VGAGKYKLLFDDGYECDVLGKD--ILLC------------------------ 59 (156)
T ss_dssp -CCSTTCEEEECSSCSSEEEEEEEEEC-CTTTEEEEECTTSCEEEEETTT--EEEE------------------------
T ss_pred CcchhccEEEEEcCCCCcccccEEEEe-ccCCEEEEEEcCCCeeEeeccc--eEEE------------------------
Confidence 567999999999999999999999996 6777899999999988776542 2110
Q ss_pred chhHHhhhcccccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccc
Q 001263 318 YDEMVVLAASLDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISF 396 (1112)
Q Consensus 318 ~de~~~~a~~~~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f 396 (1112)
..+.++.-|.|-..+==|=|++|.. + +....+..|.|.+ +...-|++.++|..=
T Consensus 60 --------------~~LP~~~~V~A~~~ddy~s~giI~~--h-------~~~~~e~~Y~Ve~--~G~t~~~~~~dI~LS 113 (156)
T 1ssf_A 60 --------------DPIPLDTEVTALSEDEYFSAGVVKG--H-------RKESGELYYSIEK--EGQRKWYKRMAVILS 113 (156)
T ss_dssp --------------CCSCSSEEEEESSCTTTCEEEEEEE--E-------EEETTEEEEEEEE--TTEEEEECGGGEEEE
T ss_pred --------------eccCCCcEEEEccCCccccccEEEe--e-------cCCCCcEEEEEEe--CCcEEEEEeeeEEEC
Confidence 0123344444442222222455532 1 2334456689997 777889888887643
No 102
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=95.50 E-value=0.0044 Score=61.04 Aligned_cols=46 Identities=24% Similarity=0.611 Sum_probs=37.5
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcC---------CCCCCceecccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELE---------PVNGVLWLCNLCRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~---------~~~~~~W~C~~C~~ 698 (1112)
.++.|.||..++ .|+.||.|..+||..|..... .+.+ +|.|..|..
T Consensus 62 ~~d~C~vC~~GG-----~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~-~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEGG-----NLICCDFCHNAFCKKCILRNLGRKELSTIMDENN-QWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCCS-----SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTT-CCCCTTTCC
T ss_pred CCCeecccCCCC-----cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCC-CCEeecccC
Confidence 457999999876 589999999999999997322 2455 999999975
No 103
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=95.49 E-value=0.0037 Score=64.43 Aligned_cols=52 Identities=23% Similarity=0.570 Sum_probs=39.2
Q ss_pred CccccccCCcccCC--CeeEEccCCCccccccccCCcCC--------CCCCceecccccCCC
Q 001263 649 DKCSVCHMDEEYQN--NLFLQCDKCRMMVHARCYGELEP--------VNGVLWLCNLCRPGA 700 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~--n~ll~Cd~C~~~VH~~CYG~~~~--------~~~~~W~C~~C~~~~ 700 (1112)
..|.||......++ ..||.||.|...||..|-|+... |+...|+|+.|....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 47999988654432 35999999999999999998531 222379999998643
No 104
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=95.49 E-value=0.019 Score=50.92 Aligned_cols=47 Identities=28% Similarity=0.368 Sum_probs=42.4
Q ss_pred CccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccC-CCccccccc
Q 001263 240 AFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 286 (1112)
Q Consensus 240 ~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Ydd-g~~e~l~l~ 286 (1112)
--+|..|-..|..|+.||.++|+..+...+...|.|-| |..|.|.++
T Consensus 10 ~~~G~~c~A~~s~Dg~wYRA~I~~i~~~~~~~~V~fiDYGN~e~V~~~ 57 (78)
T 2d9t_A 10 WKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLS 57 (78)
T ss_dssp CCTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETTTTEEEEEEGG
T ss_pred CCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEcHH
Confidence 34899999999999999999999999877889999998 999988875
No 105
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=95.45 E-value=0.019 Score=50.66 Aligned_cols=46 Identities=28% Similarity=0.424 Sum_probs=41.6
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccC-CCccccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 286 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Ydd-g~~e~l~l~ 286 (1112)
-+|..|-..|..|+.||.|+|++.+...+...|.|.| |..|.+.++
T Consensus 19 kvGd~C~A~ys~Dg~wYRA~I~~i~~~~~~~~V~fvDYGN~e~V~~~ 65 (77)
T 3pnw_C 19 KPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLS 65 (77)
T ss_dssp CTTCEEEEEETTTTEEEEEEEEEECTTSSEEEEEETTTCCEEEEEGG
T ss_pred CcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEeHH
Confidence 3899999999999999999999999888889999997 888888764
No 106
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=95.08 E-value=0.0083 Score=70.52 Aligned_cols=47 Identities=23% Similarity=0.235 Sum_probs=34.3
Q ss_pred ccccCCCCCCCCceEEEEEEC-------CeeEEEEEEccCCCCCCeEEEecCCC
Q 001263 1022 IAHLINHSCEPNCYSRVISVN-------GDEHIIIFAKRDIKQWEELTYDYRFF 1068 (1112)
Q Consensus 1022 ~aRfINHSC~PNc~~~~~~~~-------~~~~i~i~A~RdI~~GEELT~dY~~~ 1068 (1112)
++=++||+|.||.....+.++ +...+.+.|.|+|++||||+++|+..
T Consensus 189 ~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~ 242 (440)
T 2h21_A 189 MADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN 242 (440)
T ss_dssp STTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred chHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence 455789999997432222322 24679999999999999999999864
No 107
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=94.90 E-value=0.073 Score=51.44 Aligned_cols=108 Identities=14% Similarity=0.200 Sum_probs=66.2
Q ss_pred CceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCcc-ccccccceEEEEecchhhhhhhhcccccCCCCCCCCchhH
Q 001263 243 GLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEE-DLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDYDEM 321 (1112)
Q Consensus 243 g~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e-~l~l~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~de~ 321 (1112)
+..|.|+= .+..||+|+|+.+ ....-.|.|++. +. .-.+.-..+++ .+..
T Consensus 5 ~~~VEV~~-~~G~~y~a~V~~v--~~d~~~V~f~n~-w~~~~~vp~~~vRl------------------pP~~------- 55 (128)
T 3h8z_A 5 GLPVEVRG-SNGAFYKGFVKDV--HEDSVTIFFENN-WQSERQIPFGDVRL------------------PPPA------- 55 (128)
T ss_dssp TCEEEEEC-TTSCEEEEEEEEE--CSSEEEEEETTC-TTCCEEEEGGGEEC------------------CCCC-------
T ss_pred ccEEEEec-CCCCEEEEEEEEE--eCCcEEEEEccc-cCcceEechhhEEc------------------CCCc-------
Confidence 45677766 5589999999997 577799999763 11 00111112222 1100
Q ss_pred HhhhcccccCCCCCCCcEEEEeccC-----cCCCCceeecCccccCccccccCCCCCcEEEEEeC-CCC-EEEeeCCCcc
Q 001263 322 VVLAASLDDCQELEPGDIIWAKLTG-----HAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFG-THD-FARINVKQVI 394 (1112)
Q Consensus 322 ~~~a~~~~~~~~f~~GdlVWaK~~G-----yPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG-~~~-~awv~~~~l~ 394 (1112)
.....|..||-|=+-.+. ..||+|+|... +...|.|.|-| +.+ .-||...+|.
T Consensus 56 -------~~~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~-------------kg~f~~V~y~~~~~~~~EiV~~~rlR 115 (128)
T 3h8z_A 56 -------DYNKEITEGDEVEVYSRANEQEPCGWWLARVRMM-------------KGDFYVIEYAACDATYNEIVTLERLR 115 (128)
T ss_dssp -----------CCCTTCEEEEEECC---CCCEEEEEEEEEE-------------ETTEEEEEETTC----CEEECGGGEE
T ss_pred -------ccccCCCCCCEEEEEecCCCCCcCccEEEEEEEe-------------eCCEEEEEEcCCCCCcceEEehhheE
Confidence 011358999998776654 46999999541 13457788877 333 5899999998
Q ss_pred ccccc
Q 001263 395 SFLKG 399 (1112)
Q Consensus 395 ~f~~~ 399 (1112)
|...+
T Consensus 116 ~~n~~ 120 (128)
T 3h8z_A 116 PVNPN 120 (128)
T ss_dssp ECCCC
T ss_pred eCCCC
Confidence 87654
No 108
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=94.20 E-value=0.012 Score=56.94 Aligned_cols=47 Identities=21% Similarity=0.593 Sum_probs=36.5
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCc-------CCC-CCCceecccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGEL-------EPV-NGVLWLCNLCRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~-------~~~-~~~~W~C~~C~~ 698 (1112)
.++.|.||..++ .|+.||.|..+||..|.... .+. +.++|.|..|..
T Consensus 56 ~~~~C~vC~dGG-----~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCAEGG-----NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTCCCS-----EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecCCCC-----eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 346899999765 58999999999999999732 221 234999999964
No 109
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=93.83 E-value=0.026 Score=66.45 Aligned_cols=37 Identities=24% Similarity=0.536 Sum_probs=30.1
Q ss_pred CCeeEEccCCCccccccccCCcCCCC--CCceecccccC
Q 001263 662 NNLFLQCDKCRMMVHARCYGELEPVN--GVLWLCNLCRP 698 (1112)
Q Consensus 662 ~n~ll~Cd~C~~~VH~~CYG~~~~~~--~~~W~C~~C~~ 698 (1112)
+..+|.||.|.-.||-.|.|+..... -+.|+|+.|..
T Consensus 55 ~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 55 DFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp TTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred CCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 34699999999999999999865432 24899999985
No 110
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=93.82 E-value=0.032 Score=66.55 Aligned_cols=43 Identities=16% Similarity=0.059 Sum_probs=32.8
Q ss_pred ccccCCCCCCCCceEEEEEECCeeEEEEEEccCCCCCCeEEEecCC
Q 001263 1022 IAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRF 1067 (1112)
Q Consensus 1022 ~aRfINHSC~PNc~~~~~~~~~~~~i~i~A~RdI~~GEELT~dY~~ 1067 (1112)
++=++||+|.||.. .+ ......+.++|.|+|++|||||++|+.
T Consensus 272 ~~Dm~NH~~~~~~~--~~-~~~~~~~~~~a~~~i~~Geei~isYG~ 314 (497)
T 3smt_A 272 LWDMCNHTNGLITT--GY-NLEDDRCECVALQDFRAGEQIYIFYGT 314 (497)
T ss_dssp TGGGCEECSCSEEE--EE-ETTTTEEEEEESSCBCTTCEEEECCCS
T ss_pred hHHhhcCCCcccce--ee-eccCCeEEEEeCCccCCCCEEEEeCCC
Confidence 34578999999632 12 223456889999999999999999975
No 111
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=93.39 E-value=0.061 Score=47.96 Aligned_cols=56 Identities=18% Similarity=0.275 Sum_probs=45.3
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccc
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 399 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~ 399 (1112)
...|.+||.|.||...--|-||+|.... +++.|.|.|++ ...-=|...+|+|+.++
T Consensus 19 ~~~f~vGd~VlArW~D~~yYPAkI~sV~------------~~~~YtV~F~D-G~~etvk~~~IKp~~~~ 74 (85)
T 3qii_A 19 SSEFQINEQVLACWSDCRFYPAKVTAVN------------KDGTYTVKFYD-GVVQTVKHIHVKAFSKD 74 (85)
T ss_dssp --CCCTTCEEEEECTTSCEEEEEEEEEC------------TTSEEEEEETT-SCEEEEEGGGEEECC--
T ss_pred CcccccCCEEEEEeCCCCEeeEEEEEEC------------CCCeEEEEEeC-CCeEEecHHHcccCChh
Confidence 4579999999999999999999997521 22569999998 88899999999999874
No 112
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=93.29 E-value=0.17 Score=41.51 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=40.0
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 286 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~ 286 (1112)
+|..|-+.|-+ ..||.|+|+..|....+..|+++||.+-|+.+.
T Consensus 6 ~GedVLarwsD-G~fYlGtI~~V~~~~~~clV~F~D~s~~W~~~k 49 (58)
T 4hcz_A 6 EGQDVLARWTD-GLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWK 49 (58)
T ss_dssp TTCEEEEECTT-SCEEEEEEEEEETTTTEEEEEETTSCEEEEEGG
T ss_pred cCCEEEEEecC-CCEEeEEEEEEecCCCEEEEEEcCCCeEEEEhH
Confidence 78889999976 899999999999999999999999999888763
No 113
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=93.10 E-value=0.079 Score=45.28 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=45.9
Q ss_pred cCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccc
Q 001263 330 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 399 (1112)
Q Consensus 330 ~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~ 399 (1112)
+...|++||.|.||...--|-||+|... .+++.|.|.|++ ....=|...+|.|+.++
T Consensus 3 ~~~~~~vGd~vmArW~D~~yYpA~I~si------------~~~~~Y~V~F~d-G~~etvk~~~ikp~~~~ 59 (67)
T 3p8d_A 3 MSSEFQINEQVLACWSDCRFYPAKVTAV------------NKDGTYTVKFYD-GVVQTVKHIHVKAFSKD 59 (67)
T ss_dssp --CCCCTTCEEEEECTTSCEEEEEEEEE------------CTTSEEEEEETT-SCEEEEEGGGEEECC--
T ss_pred cCcccccCCEEEEEcCCCCEeeEEEEEE------------CCCCeEEEEEeC-CceEEEeHHHcccCCcc
Confidence 3567999999999998899999999652 122569999999 88999999999999874
No 114
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=92.91 E-value=0.19 Score=47.11 Aligned_cols=88 Identities=18% Similarity=0.213 Sum_probs=66.0
Q ss_pred CCcEEEEecc--CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccccccccccccCChHHH
Q 001263 336 PGDIIWAKLT--GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKKPRF 413 (1112)
Q Consensus 336 ~GdlVWaK~~--GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~~~~~~~k~k~~~f 413 (1112)
+|-+|-.... --.|-||.|+.|.-.... .-++.+++|+=|-|..|.-|+.+++..|...... + -...+
T Consensus 13 lGkVV~V~~~~kk~~WfPALVVsPs~~d~v-----~vkKd~~LVRSFkDgKf~sV~rkdv~e~~~~~~~----k-~d~sl 82 (117)
T 2yrv_A 13 LGKVVSVVSATERTEWYPALVISPSCNDDI-----TVKKDQCLVRSFIDSKFYSIARKDIKEVDILNLP----E-SELST 82 (117)
T ss_dssp TTSEEEEECSSCSSCEEEEEEECCSSCSSC-----CCCTTCEEEEESSSCCEEEECTTTEECCCSTTSC----H-HHHHH
T ss_pred cCcEEEEecCCCCCceeeeEEECCCCCCCe-----eeccceEEEEeeccCeEEEEEhHhhhhccccccc----c-CchhH
Confidence 5777776654 335999999998654431 1236789999999999999999999999864111 1 12577
Q ss_pred HHHHHHHHHHHHhCCChhHH
Q 001263 414 TQSLEEAKVYLSEQKLPRRM 433 (1112)
Q Consensus 414 ~~Al~Ea~~~~~~~~~~~~~ 433 (1112)
+.|++.|..+++...+|..+
T Consensus 83 K~a~d~A~~fl~~~~lP~~W 102 (117)
T 2yrv_A 83 KPGLQKASIFLKTRVVPDNW 102 (117)
T ss_dssp CHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHhcCCCCCcc
Confidence 89999999999999988433
No 115
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=92.85 E-value=0.029 Score=49.41 Aligned_cols=50 Identities=20% Similarity=0.579 Sum_probs=37.2
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCc-------------CCCCCCceecccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGEL-------------EPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~-------------~~~~~~~W~C~~C~~~ 699 (1112)
.|+.|.||...+ .+.|+.|.-|+..||..|+.-. .-.....|.|..|.+-
T Consensus 14 ~D~~C~VC~~~t---~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 14 NDEMCDVCEVWT---AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CSCCCTTTCCCC---SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcccCcccccc---ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 568999998654 3478999999999999998411 1122347999999763
No 116
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.92 E-value=0.19 Score=44.75 Aligned_cols=45 Identities=16% Similarity=0.230 Sum_probs=43.0
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 286 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~ 286 (1112)
+|.-|.+.-++|++||-|.|..-++.++-|.+.||=|.+|.+...
T Consensus 24 ~g~~vaak~~d~n~WyRakV~~v~~~~~veVl~~DyGn~~~V~~~ 68 (85)
T 2eqk_A 24 NDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVD 68 (85)
T ss_dssp SSCEEEEECSSSCCEEEEEEEEECSSSEEEEECTTTCCEEEEETT
T ss_pred CCCEEEEEeCCCCeEEEEEEEEecCCCeEEEEEEccCCEEEEEcc
Confidence 899999999999999999999999999999999999999999865
No 117
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=91.90 E-value=0.021 Score=66.66 Aligned_cols=49 Identities=22% Similarity=0.567 Sum_probs=38.3
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccCCcCCC--CCCceecccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRP 698 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~--~~~~W~C~~C~~ 698 (1112)
.+.|+|+...+ ++..||.||.|...+|..|.|+...+ ..+.|+|..|..
T Consensus 5 ~~yCiC~~~~d-~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~ 55 (447)
T 3kv4_A 5 PVYCLCRLPYD-VTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEV 55 (447)
T ss_dssp CEETTTTEECC-TTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHH
T ss_pred CeEEeCCCcCC-CCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcc
Confidence 46779987542 34679999999999999999986543 224899999975
No 118
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=91.64 E-value=0.035 Score=65.71 Aligned_cols=49 Identities=27% Similarity=0.548 Sum_probs=37.7
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccCCcCCCC--CCceecccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVN--GVLWLCNLCRP 698 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~--~~~W~C~~C~~ 698 (1112)
...|+|+...+ .+..||+||.|...+|..|.|+...+. .+.|+|..|..
T Consensus 37 ~~yC~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 37 PVYCVCRQPYD-VNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp CEETTTTEECC-TTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred CeEEeCCCcCC-CCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 34459987642 245799999999999999999876542 24799999975
No 119
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=91.18 E-value=0.45 Score=49.46 Aligned_cols=133 Identities=14% Similarity=0.167 Sum_probs=83.1
Q ss_pred CccCceeEEEccCCC--CeeeEEEEEeeCCCC--eEEEEccCCCccccccccceEEEEecchhhhhhhhcccccCCCCCC
Q 001263 240 AFIGLQCKVYWPLDA--DWYSGFVVGYDSESN--RHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDG 315 (1112)
Q Consensus 240 ~~vg~~~~v~wp~d~--~~y~g~v~~~~~~~~--~h~v~Yddg~~e~l~l~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~ 315 (1112)
-.||.||-..|.+.. .||.|.|..=..... ++.|.||||...++.+..=..-+.-+..=++.+. + .
T Consensus 69 l~vG~RVVA~~~~~~~~~fY~GiVaE~p~~~N~~RyLVFFDDG~~~Yv~~~~V~~Vc~~s~~vW~di~------~----~ 138 (213)
T 3dlm_A 69 LYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIE------D----I 138 (213)
T ss_dssp CCTTCEEEEEEECSSCEEEEEEEEEECCCTTTTSCEEEEETTSCEEEECGGGEEEBSSCCSSGGGGCS------C----H
T ss_pred EeEEEEEEEEecCCCCcceeeeEEEECCccCCCceEEEEEeCCCcceecCceEEEEEEcccchhhhcC------c----c
Confidence 359999999998764 899999998655333 8999999999999887533322211111000000 0 0
Q ss_pred CCchhHHhhhcccccC--CCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCC--
Q 001263 316 YDYDEMVVLAASLDDC--QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVK-- 391 (1112)
Q Consensus 316 ~~~de~~~~a~~~~~~--~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~-- 391 (1112)
...+-+..+-.++.+. -++++|+.+-.-..|. ||=|+|+..+ ..-+.|+|-.+...-||-.-
T Consensus 139 ~~r~FIk~YL~~yP~rpmv~~~~GQ~i~~E~~g~-w~~~~V~~vD-------------~SLv~v~f~~dkr~EWIYRGS~ 204 (213)
T 3dlm_A 139 SCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEGT-WWKSRVEEVD-------------GSLVRILFLDDKRCEWIYRGST 204 (213)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCCTTCEEEEEETTE-EEEEEEEEEE-------------TTEEEEEETTTTEEEEEETTCT
T ss_pred hhHHHHHHHHHhCCCCceEEcCCCCEEEEEecCc-EEEEEEEEEc-------------ceeEEEEEcCCCeeEEEEcCCc
Confidence 0011122222233322 2689999999977774 8999997632 12356889888889999654
Q ss_pred Ccccc
Q 001263 392 QVISF 396 (1112)
Q Consensus 392 ~l~~f 396 (1112)
.|.|+
T Consensus 205 Rl~pl 209 (213)
T 3dlm_A 205 RLEPM 209 (213)
T ss_dssp TBCC-
T ss_pred cchhc
Confidence 44443
No 120
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=90.27 E-value=0.33 Score=41.85 Aligned_cols=44 Identities=20% Similarity=0.309 Sum_probs=39.4
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCcccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 285 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l 285 (1112)
-+|..|=+.|- |..||-|+|+.-|....+..|.++||.+-|+..
T Consensus 28 ~eGeDVLarws-DGlfYLGTI~kV~~~~e~ClV~F~D~S~~W~~~ 71 (79)
T 2m0o_A 28 WEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLW 71 (79)
T ss_dssp CTTCEEEBCCT-TSCCCEEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ccCCEEEEEec-CCCEEeEEEEEeccCCCEEEEEEcCCCeEEEEe
Confidence 37888888884 789999999999999999999999999988765
No 121
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=89.55 E-value=0.35 Score=44.79 Aligned_cols=61 Identities=11% Similarity=0.210 Sum_probs=48.1
Q ss_pred ccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCccccccc
Q 001263 329 DDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 399 (1112)
Q Consensus 329 ~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~~ 399 (1112)
.....|.+|+.|++.- |=-|.+|.|++... ..+...|.|.|-|-+.+ -||+...|..+++.
T Consensus 18 ~~~~~f~vGekVl~~~-~~~~YeAkIl~v~~---------~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~k~t~e 80 (102)
T 2f5k_A 18 DPKPKFQEGERVLCFH-GPLLYEAKCVKVAI---------KDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDT 80 (102)
T ss_dssp CCSCSCCTTCEEEEES-SSSEEEEEEEEEEE---------ETTEEEEEEEETTSCGGGCEEEEGGGEEESSHH
T ss_pred CCCcccCCCCEEEEEE-CCEEEEEEEEEEEE---------cCCCcEEEEEeCCcCCCceeeccHhhcccCCHH
Confidence 3345799999999988 45689999987432 12345699999998874 99999999999874
No 122
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=89.33 E-value=0.15 Score=45.05 Aligned_cols=32 Identities=38% Similarity=0.754 Sum_probs=27.2
Q ss_pred CccceeecCc--CceeeecCCCCCCccccccchhh
Q 001263 760 KLLCSICGVS--YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 760 ~~~C~iC~~~--~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
...| +|++. .|.||+|....|..|||..|.-.
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi 49 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVIL 49 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSC
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEcc
Confidence 4567 89984 79999999889999999999843
No 123
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=88.22 E-value=0.66 Score=42.16 Aligned_cols=46 Identities=24% Similarity=0.395 Sum_probs=37.0
Q ss_pred CccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEcc-CCCccccccc
Q 001263 240 AFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYV-DGDEEDLILS 286 (1112)
Q Consensus 240 ~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yd-dg~~e~l~l~ 286 (1112)
--+|.-|-+.|+.|+.||.|.|++... ++.-.|.|- =|..|.+.++
T Consensus 28 ~~~G~~c~a~~~~d~~wyRA~I~~~~~-~~~~~V~fvDyGn~e~v~~~ 74 (94)
T 3fdr_A 28 VHVGDIVAAPLPTNGSWYRARVLGTLE-NGNLDLYFVDFGDNGDCPLK 74 (94)
T ss_dssp CCTTCEEEEEETTTTEEEEEEEEEECT-TSCEEEEETTTCCEEEECGG
T ss_pred CCCCCEEEEEECCCCeEEEEEEEEECC-CCeEEEEEEcCCCeEEEEHH
Confidence 349999999999999999999999975 345556654 6888887764
No 124
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=87.92 E-value=0.19 Score=42.37 Aligned_cols=30 Identities=30% Similarity=0.663 Sum_probs=25.5
Q ss_pred ccceeecCc---CceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVS---YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|++. .+.+|||. .|..+||..|+-.
T Consensus 7 ~~C~~C~~~~~~~~~mI~Cd--~C~~WfH~~Cvgl 39 (64)
T 1we9_A 7 GQCGACGESYAADEFWICCD--LCEMWFHGKCVKI 39 (64)
T ss_dssp CCCSSSCCCCCSSSCEEECS--SSCCEEETTTTTC
T ss_pred CCCCCCCCccCCCCCEEEcc--CCCCCCCccccCc
Confidence 468899985 47899999 8999999999843
No 125
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=87.70 E-value=0.21 Score=44.17 Aligned_cols=29 Identities=24% Similarity=0.686 Sum_probs=24.2
Q ss_pred CccceeecCc---CceeeecCCCCCCccccccchh
Q 001263 760 KLLCSICGVS---YGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 760 ~~~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
...| +|++. .+.||||. .|..|||..|.-
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd--~C~~WfH~~Cvg 43 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECG--LCQDWFHGSCVG 43 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBT--TTCCEEEHHHHT
T ss_pred ccEE-EcCCccCCCCceEEcC--CCCCcEEeeecC
Confidence 3456 99985 58999999 799999999984
No 126
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=86.92 E-value=0.73 Score=38.94 Aligned_cols=58 Identities=10% Similarity=0.097 Sum_probs=45.5
Q ss_pred cCCCCCCCcEEEEecc-CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccc
Q 001263 330 DCQELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 398 (1112)
Q Consensus 330 ~~~~f~~GdlVWaK~~-GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~ 398 (1112)
....+++||++.|+.. -=-|-+|+|.... ...+.+.|+|.+-.+...|+.++|.|..+
T Consensus 5 ~~~~~~vGd~c~A~~s~Dg~wYrA~I~~v~-----------~~~~~~~V~fvdYGn~e~V~~~~Lrpl~~ 63 (64)
T 4a4f_A 5 PTHSWKVGDKCMAVWSEDGQCYEAEIEEID-----------EENGTAAITFAGYGNAEVTPLLNLKPVEE 63 (64)
T ss_dssp CSSCCCTTCEEEEECTTTSSEEEEEEEEEE-----------TTTTEEEEEETTTTEEEEEEGGGEECCSC
T ss_pred cCCCCCCCCEEEEEECCCCCEEEEEEEEEc-----------CCCCEEEEEEEecCCEEEEeHHHcEeCCC
Confidence 3457999999999985 3358899997531 11246899999888899999999999875
No 127
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=85.91 E-value=0.24 Score=42.45 Aligned_cols=28 Identities=36% Similarity=0.784 Sum_probs=23.9
Q ss_pred cceeecC--cCceeeecCCCCCCccccccch
Q 001263 762 LCSICGV--SYGACIQCSNTTCRVAYHPLCA 790 (1112)
Q Consensus 762 ~C~iC~~--~~Ga~iqC~~~~C~~~FH~~CA 790 (1112)
.| +|+. ..|.||+|....|..|||..|.
T Consensus 12 ~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cv 41 (68)
T 2rsd_A 12 RC-ICSSTMVNDSMIQCEDQRCQVWQHLNCV 41 (68)
T ss_dssp CC-TTCCCSCCSCEEECSCTTTCEEEETTTS
T ss_pred Ee-ECCCCcCCCCEEEECCCCCCCeEchhhC
Confidence 46 7976 3789999987789999999996
No 128
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=85.12 E-value=0.28 Score=42.53 Aligned_cols=31 Identities=35% Similarity=0.854 Sum_probs=25.0
Q ss_pred cCccceeecCc--Cc-eeeecCCCCCCccccccchhh
Q 001263 759 WKLLCSICGVS--YG-ACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 759 ~~~~C~iC~~~--~G-a~iqC~~~~C~~~FH~~CA~~ 792 (1112)
....| +|++. .| .+|||. .|..+||..|.-.
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd--~C~~W~H~~Cvg~ 48 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACD--GCGVWHHTRCIGI 48 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECS--SSCEEEETTTTTC
T ss_pred cceEe-eCCCccCCCCcEEECC--CCCCccCCeeecc
Confidence 34578 69986 35 699999 8999999999854
No 129
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=84.42 E-value=1.5 Score=37.23 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=36.9
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 286 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~ 286 (1112)
-+|..|=+.|-+ ..||.|+|+. ..+.+-.|+++|..+-|+.+.
T Consensus 17 ~~geDVL~rw~D-G~fYLGtIVd--~~~~~ClV~FeD~S~~Wv~~k 59 (69)
T 2xk0_A 17 ALQEDVFIKCND-GRFYLGTIID--QTSDQYLIRFDDQSEQWCEPD 59 (69)
T ss_dssp CTTCEEEEECTT-SCEEEEEEEE--ECSSCEEEEETTCCEEEECTT
T ss_pred ccCCeEEEEecC-CCEEEEEEEe--cCCceEEEEecCCcceeeeHH
Confidence 388899899976 8999999965 668899999999999888764
No 130
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=84.19 E-value=0.41 Score=40.28 Aligned_cols=31 Identities=35% Similarity=0.841 Sum_probs=25.1
Q ss_pred ccceeecC-cCceeeecCCCCCC-ccccccchhh
Q 001263 761 LLCSICGV-SYGACIQCSNTTCR-VAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~-~~Ga~iqC~~~~C~-~~FH~~CA~~ 792 (1112)
..| +|++ ..|.||+|....|. .+||..|.-.
T Consensus 12 ~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl 44 (62)
T 2g6q_A 12 TYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSL 44 (62)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGTC
T ss_pred cEE-ECCCCCCCCeeeeeCCCCCcccEecccCCc
Confidence 456 8988 36899999966688 8999999864
No 131
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=83.95 E-value=1 Score=42.13 Aligned_cols=65 Identities=20% Similarity=0.433 Sum_probs=43.8
Q ss_pred CCcccCCCCCCCceecC---CCceeeeeccccccceEecCCCCCccccccccccccccC---ccceeecCcCceeeecCC
Q 001263 705 PPCCLCPVVGGAMKPTT---DGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDRWK---LLCSICGVSYGACIQCSN 778 (1112)
Q Consensus 705 ~~C~LC~~~gGalK~t~---~g~WvHv~Cal~~pe~~f~~~~~~~pi~~i~~i~~~~~~---~~C~iC~~~~Ga~iqC~~ 778 (1112)
..|..|. .+|.|...+ ...|+|+.|+.. ..+|...|. -.|.+|++. +.+.|.
T Consensus 16 ~~C~~C~-~~G~ll~CD~~~Cp~~fH~~Cl~L------------------~~~P~g~W~Cp~c~C~~C~k~--~~~~C~- 73 (107)
T 4gne_A 16 DYCFQCG-DGGELVMCDKKDCPKAYHLLCLNL------------------TQPPYGKWECPWHQCDECSSA--AVSFCE- 73 (107)
T ss_dssp SSCTTTC-CCSEEEECCSTTCCCEECTGGGTC------------------SSCCSSCCCCGGGBCTTTCSB--CCEECS-
T ss_pred CCCCcCC-CCCcEeEECCCCCCcccccccCcC------------------CcCCCCCEECCCCCCCcCCCC--CCcCcC-
Confidence 4577777 566777665 568999999851 122333332 257778764 348898
Q ss_pred CCCCccccccchhh
Q 001263 779 TTCRVAYHPLCARA 792 (1112)
Q Consensus 779 ~~C~~~FH~~CA~~ 792 (1112)
.|..+||.-|..-
T Consensus 74 -~Cp~sfC~~c~~g 86 (107)
T 4gne_A 74 -FCPHSFCKDHEKG 86 (107)
T ss_dssp -SSSCEECTTTCTT
T ss_pred -CCCcchhhhccCC
Confidence 8999999998743
No 132
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=83.69 E-value=0.98 Score=42.30 Aligned_cols=46 Identities=24% Similarity=0.395 Sum_probs=37.4
Q ss_pred CccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEcc-CCCccccccc
Q 001263 240 AFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYV-DGDEEDLILS 286 (1112)
Q Consensus 240 ~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yd-dg~~e~l~l~ 286 (1112)
--+|.-|-+.|+.|+.||.|.|++.++. +.-.|.|- =|..|.+.++
T Consensus 33 ~~~G~~c~a~~~~d~~wyRA~V~~~~~~-~~~~V~fvDyGn~e~v~~~ 79 (110)
T 2diq_A 33 VHVGDIVAAPLPTNGSWYRARVLGTLEN-GNLDLYFVDFGDNGDCPLK 79 (110)
T ss_dssp CCTTCEEEECCTTTCSCEEEEECCCCSS-SCEEEEETTTCCEEEECGG
T ss_pred CCCCCEEEEEECCCCeEEEEEEEEECCC-CeEEEEEEeCCCeEEEehH
Confidence 3489999999999999999999999865 44555555 5899988774
No 133
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=83.99 E-value=0.22 Score=44.11 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=46.7
Q ss_pred cCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccc
Q 001263 330 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 399 (1112)
Q Consensus 330 ~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~ 399 (1112)
++..|++||.|.||...--|-||+|.... ..+.|.|.|.+ ....=|+..+|.|+.+.
T Consensus 3 ~~~~~kvGd~clAkwsDg~wY~A~I~~v~------------~~~~y~V~F~D-Gn~E~V~~s~LrPl~~~ 59 (81)
T 2ldm_A 3 MSSEFQINEQVLASWSDSRFYPAKVTAVN------------KDGTYTVKFYD-GVVQTVKHIHVKAFSKD 59 (81)
Confidence 34579999999999988889999997631 12368999998 78888999999999764
No 134
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=82.86 E-value=0.67 Score=43.88 Aligned_cols=51 Identities=22% Similarity=0.493 Sum_probs=32.4
Q ss_pred CccccccCCc--ccCCCeeEEccCCCccccccccCCcCC--CC---CCceecccccCC
Q 001263 649 DKCSVCHMDE--EYQNNLFLQCDKCRMMVHARCYGELEP--VN---GVLWLCNLCRPG 699 (1112)
Q Consensus 649 ~~C~VC~~~~--~~~~n~ll~Cd~C~~~VH~~CYG~~~~--~~---~~~W~C~~C~~~ 699 (1112)
..|..|.... ......|++|+.|...||..|.++... ++ .+.|.|..|...
T Consensus 57 ~~c~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 57 SLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp TTTCCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred cccCcccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 4455554422 122345899999999999999986421 11 125999999864
No 135
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=82.78 E-value=0.44 Score=41.67 Aligned_cols=28 Identities=32% Similarity=0.705 Sum_probs=23.5
Q ss_pred ccceeecCc--CceeeecCCCCCCccccccchh
Q 001263 761 LLCSICGVS--YGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 761 ~~C~iC~~~--~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
..| +|++. .+.||||. .|..|||..|.-
T Consensus 17 ~~C-~C~~~~~~~~MI~Cd--~C~~WfH~~Cvg 46 (76)
T 1wem_A 17 LYC-ICRQPHNNRFMICCD--RCEEWFHGDCVG 46 (76)
T ss_dssp CCS-TTCCCCCSSCEEECS--SSCCEEEHHHHS
T ss_pred CEE-ECCCccCCCCEEEeC--CCCCcEeCeEEc
Confidence 456 89985 46899999 899999999983
No 136
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=82.58 E-value=0.93 Score=42.89 Aligned_cols=76 Identities=20% Similarity=0.326 Sum_probs=45.9
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCCCC-----CCCCCcccCCCC---------C
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGAP-----EPPPPCCLCPVV---------G 714 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~~~-----~~~~~C~LC~~~---------g 714 (1112)
.+|.+|+.. .|+.|...+|..|+|. ..|.|..|..-.- .....|..|..- .
T Consensus 8 ~~C~~C~~~---------~C~~C~~c~~~~~~~~------~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~ 72 (117)
T 4bbq_A 8 RKCKACVQG---------ECGVCHYCRDMKKFGG------PGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFE 72 (117)
T ss_dssp SCSHHHHSC---------CCSCSHHHHHSGGGTS------CCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGG
T ss_pred CcCcCcCCc---------CCCCCCCCcCCcccCC------CCccccchhheeeccccccccccccccCcccccccccccC
Confidence 367777653 2999999999999983 2588888764221 111233333321 1
Q ss_pred CCce-ecCCCceeeeeccccccceEe
Q 001263 715 GAMK-PTTDGRWAHLACAIWIPETCL 739 (1112)
Q Consensus 715 GalK-~t~~g~WvHv~Cal~~pe~~f 739 (1112)
..|. -.....|+|..|.-...+..+
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~~~~ 98 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGEGLL 98 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCCCEE
T ss_pred cceEEeeecCCeEECCCCCCCccccc
Confidence 2233 334778999999876555443
No 137
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=82.40 E-value=3.6 Score=42.74 Aligned_cols=115 Identities=14% Similarity=0.219 Sum_probs=76.9
Q ss_pred CCCCccCceeEEEccCCCCeeeEEEEEeeC--CCCeEEEEccCCCccccccccceEEEEecchhhhhhhhcccccCCCCC
Q 001263 237 DPKAFIGLQCKVYWPLDADWYSGFVVGYDS--ESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDND 314 (1112)
Q Consensus 237 ~~~~~vg~~~~v~wp~d~~~y~g~v~~~~~--~~~~h~v~Yddg~~e~l~l~~e~~~~~~~~~e~~~l~~~~~~~~~~~~ 314 (1112)
|++-.||.+|-.-| .++.||.|+|+.--+ ...+..|.++++....|. --.+
T Consensus 6 ~~~l~Vg~~vlg~k-~~~~W~rg~v~~I~~~~~g~~YkVkF~~~g~~ivs--~~hi------------------------ 58 (213)
T 3dlm_A 6 QGDLIVSMRILGKK-RTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKSLLS--GNHI------------------------ 58 (213)
T ss_dssp ETTEETTCEEEEEC-TTSBEEEEEEEEEEEETTEEEEEEEESSSCEEEEC--GGGE------------------------
T ss_pred cCcEEEccEEEEEe-cCCcEEEEEEEEEEECCCCeEEEEEEcCCCCEEee--cceE------------------------
Confidence 34566999999999 668999999998554 346799999966553211 1111
Q ss_pred CCCchhHHhhhccc-ccCCCCCCCcEEEEeccCc---CCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeC
Q 001263 315 GYDYDEMVVLAASL-DDCQELEPGDIIWAKLTGH---AMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINV 390 (1112)
Q Consensus 315 ~~~~de~~~~a~~~-~~~~~f~~GdlVWaK~~Gy---PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~ 390 (1112)
|-.. .....+.+|--|-|..++- ..-|++|...+..- + ...|+| ||.+..-.|++.
T Consensus 59 ----------A~~~~p~~~~l~vG~RVVA~~~~~~~~~fY~GiVaE~p~~~-----N----~~RyLV-FFDDG~~~Yv~~ 118 (213)
T 3dlm_A 59 ----------AYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVK-----N----KLRFLI-FFDDGYASYVTQ 118 (213)
T ss_dssp ----------EESSCCCGGGCCTTCEEEEEEECSSCEEEEEEEEEECCCTT-----T----TSCEEE-EETTSCEEEECG
T ss_pred ----------EEecCCCccEEeEEEEEEEEecCCCCcceeeeEEEECCccC-----C----CceEEE-EEeCCCcceecC
Confidence 1111 1122477899999988763 46789997643211 1 123554 788888999999
Q ss_pred CCcccccc
Q 001263 391 KQVISFLK 398 (1112)
Q Consensus 391 ~~l~~f~~ 398 (1112)
+++.+--.
T Consensus 119 ~~V~~Vc~ 126 (213)
T 3dlm_A 119 SELYPICR 126 (213)
T ss_dssp GGEEEBSS
T ss_pred ceEEEEEE
Confidence 99886644
No 138
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=82.26 E-value=1.5 Score=36.40 Aligned_cols=56 Identities=18% Similarity=0.210 Sum_probs=43.8
Q ss_pred CCCCCCcEEEEecc-CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccc
Q 001263 332 QELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 398 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~-GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~ 398 (1112)
..|++||++.|+.. .=-|-+|+|.... ...+.+.|+|.+-.+..-|+.++|.|...
T Consensus 2 ~~~~~G~~c~A~~s~Dg~wYrA~I~~i~-----------~~~~~~~V~f~DYGn~e~v~~~~Lr~~~~ 58 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSEDGCIYPATIASID-----------FKRETCVVVYTGYGNREEQNLSDLLSPIC 58 (59)
T ss_dssp CCCCTTCEEEEECTTTSCEEEEEEEEEE-----------TTTTEEEEEETTTTEEEEEEGGGCBCTTC
T ss_pred CcCCcCCEEEEEECCCCCEEEEEEEEEc-----------CCCCEEEEEEEcCCCEEEEcHHHeeCCCC
Confidence 35899999999986 3468999997531 11356899998878889999999998753
No 139
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.12 E-value=2.6 Score=35.47 Aligned_cols=45 Identities=18% Similarity=0.229 Sum_probs=40.1
Q ss_pred CccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCcccccc
Q 001263 240 AFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 285 (1112)
Q Consensus 240 ~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l 285 (1112)
=-+|..|=..|-+ ..||.|+|+.-|.....-.|.+.|+.+-|+..
T Consensus 10 f~eGqdVLarWsD-GlfYlGtV~kV~~~~~~ClV~FeD~s~~wv~~ 54 (68)
T 2e5p_A 10 LWEGQDVLARWTD-GLLYLGTIKKVDSAREVCLVQFEDDSQFLVLW 54 (68)
T ss_dssp CCTTCEEEEECTT-SSEEEEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred cccCCEEEEEecC-CcEEEeEEEEEecCCcEEEEEEccCCeeeeee
Confidence 3488899899975 89999999999999999999999998888765
No 140
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=81.70 E-value=1.7 Score=38.23 Aligned_cols=58 Identities=17% Similarity=0.235 Sum_probs=46.6
Q ss_pred CCCCCCcEEEEecc-CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccccc
Q 001263 332 QELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGL 400 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~-GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~ 400 (1112)
..+++||++.|+.. .--|.+|+|.... ...+.+.|+|.+-.+..-|+.++|.|+...+
T Consensus 8 ~~~~~G~~c~A~~s~Dg~wYRA~I~~i~-----------~~~~~~~V~fiDYGN~e~V~~~~Lr~l~~~l 66 (78)
T 2d9t_A 8 KVWKPGDECFALYWEDNKFYRAEVEALH-----------SSGMTAVVKFTDYGNYEEVLLSNIKPVQTEA 66 (78)
T ss_dssp CCCCTTCEEEEECTTTCCEEEEEEEEEC-----------SSSSEEEEEETTTTEEEEEEGGGEEECCCCC
T ss_pred cCCCcCCEEEEEECCCCCEEEEEEEEEe-----------CCCCEEEEEEEcCCCeEEEcHHHeEeCCHHH
Confidence 46899999999996 3469999997631 1135689999988889999999999998753
No 141
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.53 E-value=2 Score=35.60 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=39.0
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCcccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 285 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l 285 (1112)
+|..|=..|- |..||.|+|+.-|....+-.|.+.|+.+-|+..
T Consensus 10 eGqdVLarWs-DGlfYlgtV~kV~~~~~~ClV~FeD~s~~wv~~ 52 (63)
T 2e5q_A 10 EGQYVLCRWT-DGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLW 52 (63)
T ss_dssp TTCEEEEECT-TSCEEEEEECCCCSTTSEEEEEETTSCEEEEEG
T ss_pred cCCEEEEEec-CCCEEEEEEEEEecCCCEEEEEEccCceeEEEe
Confidence 7888989995 679999999999999999999999999888765
No 142
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=81.47 E-value=0.52 Score=40.41 Aligned_cols=29 Identities=28% Similarity=0.659 Sum_probs=23.7
Q ss_pred ccceeecCc--CceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVS--YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~--~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..| +|++. ++.||||. .|..|||..|.-.
T Consensus 20 ~~C-iC~~~~~~~~MIqCd--~C~~WfH~~Cvgi 50 (68)
T 3o70_A 20 VTC-FCMKPFAGRPMIECN--ECHTWIHLSCAKI 50 (68)
T ss_dssp CCS-TTCCCCTTCCEEECT--TTCCEEETTTTTC
T ss_pred eEe-ECCCcCCCCCEEECC--CCCccccccccCc
Confidence 456 99985 34799999 7999999999844
No 143
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=81.44 E-value=1.1 Score=39.33 Aligned_cols=59 Identities=17% Similarity=0.247 Sum_probs=44.4
Q ss_pred cCCCCCCCcEEEEecc-CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccc
Q 001263 330 DCQELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 399 (1112)
Q Consensus 330 ~~~~f~~GdlVWaK~~-GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~ 399 (1112)
....+++||++.||.. .--|.+|+|.... ...+.+.|+|.+-.+..-|+.++|.|+..+
T Consensus 14 ~~~~~kvGd~C~A~ys~Dg~wYRA~I~~i~-----------~~~~~~~V~fvDYGN~e~V~~~~Lr~l~~~ 73 (77)
T 3pnw_C 14 YAKMWKPGDECFALYWEDNKFYRAEVEALH-----------SSGMTAVVKFIDYGNYEEVLLSNIKPIQTE 73 (77)
T ss_dssp HHTTCCTTCEEEEEETTTTEEEEEEEEEEC-----------TTSSEEEEEETTTCCEEEEEGGGEECC---
T ss_pred hcCCCCcCCEEEEEECCCCCEEEEEEEEEe-----------CCCCEEEEEEEcCCCeEEEeHHHeEECChh
Confidence 3457999999999984 4469999997531 112458899998888999999999998764
No 144
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=81.23 E-value=1.7 Score=35.29 Aligned_cols=52 Identities=19% Similarity=0.312 Sum_probs=40.2
Q ss_pred CCCCcEEEEecc-CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccc
Q 001263 334 LEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISF 396 (1112)
Q Consensus 334 f~~GdlVWaK~~-GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f 396 (1112)
|++||++.||.. -=-|.+|+|.... ...+.+.|+|.+-.+..-|+.++|.|.
T Consensus 2 wk~G~~c~A~~s~Dg~wYrA~I~~i~-----------~~~~~~~V~fvDYGn~e~v~~~~lrpi 54 (54)
T 3s6w_A 2 WKPGDECFALYWEDNKFYRAEVEALH-----------SSGMTAVVKFIDYGNYEEVLLSNIKPI 54 (54)
T ss_dssp CCTTCEEEEEETTTTEEEEEEEEEC-------------CCSEEEEEETTTCCEEEEEGGGEECC
T ss_pred CCCCCEEEEEECCCCCEEEEEEEEEe-----------CCCCEEEEEEEccCCeEEEeHHHEEEC
Confidence 789999999984 3358999997631 112458899998888999999998873
No 145
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=80.81 E-value=0.63 Score=37.60 Aligned_cols=30 Identities=27% Similarity=0.564 Sum_probs=23.8
Q ss_pred ccceeecCc--CceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVS--YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~--~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..-++|++. ++.||||. .|..+||..|.-.
T Consensus 4 ~~~C~C~~~~~~~~MI~Cd--~C~~W~H~~Cvgi 35 (52)
T 3o7a_A 4 LVTCFCMKPFAGRPMIECN--ECHTWIHLSCAKI 35 (52)
T ss_dssp CBCSTTCCBCTTCCEEECT--TTCCEEETTTTTC
T ss_pred CeEEEeCCcCCCCCEEEcC--CCCccccccccCC
Confidence 345578874 45999999 7999999999843
No 146
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=80.73 E-value=0.66 Score=38.62 Aligned_cols=30 Identities=33% Similarity=0.838 Sum_probs=24.6
Q ss_pred ccceeecCc-CceeeecCCCCCC-ccccccchh
Q 001263 761 LLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 791 (1112)
Q Consensus 761 ~~C~iC~~~-~Ga~iqC~~~~C~-~~FH~~CA~ 791 (1112)
..| +|++. .|-||+|....|. .+||..|.-
T Consensus 10 ~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvg 41 (59)
T 3c6w_A 10 TYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD 41 (59)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGT
T ss_pred cEE-ECCCCCCCCeeEeeCCCCCCCCEecccCC
Confidence 356 89873 6899999966698 699999986
No 147
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=80.12 E-value=2.1 Score=44.73 Aligned_cols=44 Identities=27% Similarity=0.437 Sum_probs=37.9
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccC-CCccccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 286 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Ydd-g~~e~l~l~ 286 (1112)
-+|.-|-+.|+.|+.||.|.|++... ..-.|.|-| |..|.+.++
T Consensus 53 ~~g~~c~a~~~~d~~wyRa~V~~v~~--~~~~V~~vDyG~~~~v~~~ 97 (218)
T 2wac_A 53 KRGDLVAAQFTLDNQWYRAKVERVQG--SNATVLYIDYGNKETLPTN 97 (218)
T ss_dssp CTTCEEEEECTTTCCEEEEEEEEEET--TEEEEEETTTCCEEEEEGG
T ss_pred CcCCEEEEEECCCCeEEEEEEEEecC--CeEEEEEEecCCeEEEchH
Confidence 38999999999999999999999987 667788765 999988764
No 148
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=80.03 E-value=0.65 Score=38.89 Aligned_cols=29 Identities=38% Similarity=0.835 Sum_probs=25.9
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+. .|.+|.|. .|..+||..|...
T Consensus 12 ~~C~vC~~-~g~ll~CD--~C~~~fH~~Cl~p 40 (61)
T 2l5u_A 12 DYCEVCQQ-GGEIILCD--TCPRAYHMVCLDP 40 (61)
T ss_dssp SSCTTTSC-CSSEEECS--SSSCEEEHHHHCT
T ss_pred CCCccCCC-CCcEEECC--CCChhhhhhccCC
Confidence 47999998 68999999 8999999999865
No 149
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=79.25 E-value=0.69 Score=43.19 Aligned_cols=29 Identities=24% Similarity=0.670 Sum_probs=25.4
Q ss_pred ccceeecCc---CceeeecCCCCCCccccccch
Q 001263 761 LLCSICGVS---YGACIQCSNTTCRVAYHPLCA 790 (1112)
Q Consensus 761 ~~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA 790 (1112)
..|.+|++. .|.+|+|. ..|..|||..|.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cd-d~C~~WfH~~CV 35 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCE-ASCQKWFHRECT 35 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECT-TTTCCEEEGGGT
T ss_pred CCCCCCCCccCCCCCEEEec-CCcccccccccC
Confidence 379999986 57899998 589999999997
No 150
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=79.10 E-value=0.74 Score=39.85 Aligned_cols=30 Identities=33% Similarity=0.838 Sum_probs=24.8
Q ss_pred ccceeecCc-CceeeecCCCCCC-ccccccchh
Q 001263 761 LLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 791 (1112)
Q Consensus 761 ~~C~iC~~~-~Ga~iqC~~~~C~-~~FH~~CA~ 791 (1112)
..| +|++. .|.||+|....|. .+||..|.-
T Consensus 17 ~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg 48 (71)
T 1wen_A 17 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 48 (71)
T ss_dssp CCS-TTCCCSCSSEECCSCSSCSCCCEETTTTT
T ss_pred CEE-ECCCCCCCCEeEeeCCCCCCccEecccCC
Confidence 467 79984 6899999966698 799999985
No 151
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=78.71 E-value=0.61 Score=40.59 Aligned_cols=30 Identities=27% Similarity=0.577 Sum_probs=24.9
Q ss_pred ccceeecCc--CceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVS--YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~--~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|++. .+.+|+|. .|..+||..|.-.
T Consensus 19 ~~C~~C~~~~~~~~mi~CD--~C~~wfH~~Cv~~ 50 (75)
T 2k16_A 19 WICPGCNKPDDGSPMIGCD--DCDDWYHWPCVGI 50 (75)
T ss_dssp ECBTTTTBCCSSCCEEECS--SSSSEEEHHHHTC
T ss_pred cCCCCCCCCCCCCCEEEcC--CCCcccccccCCC
Confidence 469999885 34799999 8999999999754
No 152
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=78.36 E-value=0.73 Score=37.25 Aligned_cols=29 Identities=21% Similarity=0.518 Sum_probs=23.7
Q ss_pred cceeecCc---CceeeecCCCCCCccccccchh
Q 001263 762 LCSICGVS---YGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 762 ~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
.|.+|+++ .+.+|+|.. .|..+||..|+-
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~-~C~~WfH~~Cvg 35 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDG-GCDEWFHQVCVG 35 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTT-TTCCEEETTTTT
T ss_pred cCCCCcCccCCCCcEEEeCC-CCCccCcccccC
Confidence 47888875 356999986 799999999973
No 153
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=77.51 E-value=0.8 Score=42.16 Aligned_cols=27 Identities=41% Similarity=0.814 Sum_probs=23.0
Q ss_pred cceeecCc--CceeeecCCCCCCccccccchh
Q 001263 762 LCSICGVS--YGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 762 ~C~iC~~~--~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
.| +|+.. .|.+|+|. .|..+||..|.-
T Consensus 30 rC-iC~~~~~~~~mi~Cd--~C~~w~H~~C~~ 58 (98)
T 2lv9_A 30 RC-ICGFTHDDGYMICCD--KCSVWQHIDCMG 58 (98)
T ss_dssp CC-TTSCCSCSSCEEEBT--TTCBEEETTTTT
T ss_pred Ee-ECCCccCCCcEEEcC--CCCCcCcCcCCC
Confidence 46 78874 68999999 899999999974
No 154
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.43 E-value=1.1 Score=39.58 Aligned_cols=52 Identities=21% Similarity=0.558 Sum_probs=29.6
Q ss_pred cCcCccccccCCcccCCCeeE-Ec--cCCCccccccccCCcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFL-QC--DKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll-~C--d~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
.+...|.||......+ +.++ -| .+..-.||+.|.-.=....+ ...|+.|...
T Consensus 13 ~~~~~C~IC~~~~~~~-~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~-~~~CplCr~~ 67 (80)
T 2d8s_A 13 SSQDICRICHCEGDDE-SPLITPCHCTGSLHFVHQACLQQWIKSSD-TRCCELCKYE 67 (80)
T ss_dssp TTSCCCSSSCCCCCSS-SCEECSSSCCSSSCCEETTHHHHHHHHHC-CSBCSSSCCB
T ss_pred CCCCCCeEcCccccCC-CeeEeccccCCcCCeeCHHHHHHHHhhCC-CCCCCCCCCe
Confidence 3457999998765433 3444 22 34458999999851000001 2367777653
No 155
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=78.97 E-value=0.47 Score=42.55 Aligned_cols=59 Identities=8% Similarity=0.068 Sum_probs=47.3
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCccccccc
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 399 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~~ 399 (1112)
...|.+|+.|++...+ -|.+|.|++... ..+...|.|+|-|-+.. -||+..+|..+++.
T Consensus 10 ~~~~~~Gekv~~~~~~-~~y~AkIl~i~~---------~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k~t~e 70 (85)
T 2lrq_A 10 NTLFVDGERVLCFHGP-LIYEAKVLKTKP---------DATPVEYYIHYAGWSKNWDEWVPENRVLKYNDD 70 (85)
Confidence 3469999999999876 579999987432 12346799999998874 99999999999875
No 156
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.30 E-value=3.2 Score=36.16 Aligned_cols=56 Identities=14% Similarity=0.257 Sum_probs=45.8
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccc
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 399 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~ 399 (1112)
...|++||.|.||...--|-||+|.... ..+.+.|.|.+- ..-=|+..+|.|+.+.
T Consensus 7 ~~~~kvGd~clA~wsDg~~Y~A~I~~v~------------~~~~~~V~f~Dy-n~e~v~~~~lrplp~~ 62 (74)
T 2equ_A 7 GFDFKAGEEVLARWTDCRYYPAKIEAIN------------KEGTFTVQFYDG-VIRCLKRMHIKAMPED 62 (74)
T ss_dssp CCCCCTTCEEEEECSSSSEEEEEEEEES------------TTSSEEEEETTS-CEEEECGGGEECCCGG
T ss_pred CCCCCCCCEEEEECCCCCEEEEEEEEEC------------CCCEEEEEEecC-CeEEecHHHCeeCChh
Confidence 4579999999999987789999997631 124689999976 8888999999999874
No 157
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=77.25 E-value=1.1 Score=40.75 Aligned_cols=30 Identities=33% Similarity=0.838 Sum_probs=24.9
Q ss_pred ccceeecCc-CceeeecCCCCCC-ccccccchh
Q 001263 761 LLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 791 (1112)
Q Consensus 761 ~~C~iC~~~-~Ga~iqC~~~~C~-~~FH~~CA~ 791 (1112)
..| +|++. .|-||+|....|. .+||..|.-
T Consensus 37 ~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVg 68 (91)
T 1weu_A 37 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 68 (91)
T ss_dssp BCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTT
T ss_pred cEE-ECCCCCCCCEeEecCCCCCCCCEecccCC
Confidence 456 99983 6899999966698 799999985
No 158
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=77.22 E-value=0.98 Score=37.68 Aligned_cols=30 Identities=33% Similarity=0.838 Sum_probs=24.4
Q ss_pred ccceeecCc-CceeeecCCCCCC-ccccccchh
Q 001263 761 LLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 791 (1112)
Q Consensus 761 ~~C~iC~~~-~Ga~iqC~~~~C~-~~FH~~CA~ 791 (1112)
..| +|++. .|.+|+|....|. .+||..|.-
T Consensus 11 ~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvg 42 (60)
T 2vnf_A 11 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 42 (60)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGT
T ss_pred CEE-ECCCcCCCCEEEeCCCCCCCceEehhcCC
Confidence 356 89873 6899999966688 799999986
No 159
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=76.51 E-value=1 Score=40.85 Aligned_cols=31 Identities=32% Similarity=0.844 Sum_probs=24.7
Q ss_pred CccceeecC-cCceeeecCCCCCC-ccccccchh
Q 001263 760 KLLCSICGV-SYGACIQCSNTTCR-VAYHPLCAR 791 (1112)
Q Consensus 760 ~~~C~iC~~-~~Ga~iqC~~~~C~-~~FH~~CA~ 791 (1112)
...| +|++ ..|.||.|....|. .+||..|.-
T Consensus 26 ~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVg 58 (90)
T 2jmi_A 26 EVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVG 58 (90)
T ss_dssp SCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSS
T ss_pred CcEE-EeCCCCCCCEEEecCCCCccccCcCccCC
Confidence 3467 8997 47889999966677 799999983
No 160
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=76.09 E-value=0.9 Score=37.78 Aligned_cols=29 Identities=34% Similarity=0.805 Sum_probs=25.7
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+. .|.+|.|. .|..+||..|...
T Consensus 6 ~~C~vC~~-~g~ll~Cd--~C~~~fH~~Cl~p 34 (60)
T 2puy_A 6 DFCSVCRK-SGQLLMCD--TCSRVYHLDCLDP 34 (60)
T ss_dssp SSCTTTCC-CSSCEECS--SSSCEECGGGSSS
T ss_pred CCCcCCCC-CCcEEEcC--CCCcCEECCcCCC
Confidence 47999998 58999999 8999999999864
No 161
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=75.70 E-value=0.85 Score=38.74 Aligned_cols=29 Identities=28% Similarity=0.764 Sum_probs=24.6
Q ss_pred ccceeecCc---CceeeecCCCCCCccccccch
Q 001263 761 LLCSICGVS---YGACIQCSNTTCRVAYHPLCA 790 (1112)
Q Consensus 761 ~~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA 790 (1112)
..|.+|+++ ..-+|+|.. .|..+||..|.
T Consensus 9 ~~C~~C~~p~~~~~~mI~CD~-~C~~WfH~~Cv 40 (65)
T 2vpb_A 9 YPCGICTNEVNDDQDAILCEA-SCQKWFHRICT 40 (65)
T ss_dssp CBCTTTCSBCCTTSCEEEBTT-TTCCEEEHHHH
T ss_pred CcCccCCCccCCCCCeEeccc-CccccCchhcc
Confidence 379999986 346999984 89999999997
No 162
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=75.42 E-value=3 Score=34.22 Aligned_cols=53 Identities=17% Similarity=0.100 Sum_probs=41.8
Q ss_pred CCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccc
Q 001263 333 ELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 397 (1112)
Q Consensus 333 ~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~ 397 (1112)
.|.+|+=|+|+-+-=-.-||.|+... ....++.|+|+ |+.-.|+..++|.+..
T Consensus 3 ~f~~GedVLarwsDG~fYlGtI~~V~-----------~~~~~clV~F~-D~s~~W~~~kdi~~~~ 55 (58)
T 4hcz_A 3 RLWEGQDVLARWTDGLLYLGTIKKVD-----------SAREVCLVQFE-DDSQFLVLWKDISPAA 55 (58)
T ss_dssp SCCTTCEEEEECTTSCEEEEEEEEEE-----------TTTTEEEEEET-TSCEEEEEGGGEEECS
T ss_pred ccccCCEEEEEecCCCEEeEEEEEEe-----------cCCCEEEEEEc-CCCeEEEEhHHccccc
Confidence 68999999999988888899997632 12346889988 6678999999987653
No 163
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.72 E-value=1.3 Score=36.33 Aligned_cols=29 Identities=34% Similarity=0.805 Sum_probs=25.7
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+. .|.+|.|. .|..+||..|...
T Consensus 10 ~~C~vC~~-~g~ll~Cd--~C~~~~H~~Cl~p 38 (56)
T 2yql_A 10 DFCSVCRK-SGQLLMCD--TCSRVYHLDCLDP 38 (56)
T ss_dssp CSCSSSCC-SSCCEECS--SSSCEECSSSSSS
T ss_pred CCCccCCC-CCeEEEcC--CCCcceECccCCC
Confidence 57999998 58999999 8999999999864
No 164
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=74.69 E-value=0.77 Score=46.60 Aligned_cols=28 Identities=39% Similarity=0.848 Sum_probs=24.1
Q ss_pred CccceeecCc---CceeeecCCCCCCccccccch
Q 001263 760 KLLCSICGVS---YGACIQCSNTTCRVAYHPLCA 790 (1112)
Q Consensus 760 ~~~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA 790 (1112)
...| +|++. .|.+|+|. .|..|||..|.
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd--~C~~WfH~~Cv 38 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCD--RCQNWYHGRCV 38 (174)
T ss_dssp CEET-TTTEECCTTSCEEECT--TTCCEEEHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECC--CCCchhChhhc
Confidence 3468 99985 57899999 89999999998
No 165
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=74.53 E-value=0.8 Score=39.04 Aligned_cols=29 Identities=28% Similarity=0.730 Sum_probs=25.1
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+. .|.+|.|. .|..+||..|...
T Consensus 13 ~~C~vC~~-~~~ll~Cd--~C~~~~H~~Cl~P 41 (66)
T 2lri_C 13 ARCGVCGD-GTDVLRCT--HCAAAFHWRCHFP 41 (66)
T ss_dssp CCCTTTSC-CTTCEECS--SSCCEECHHHHCT
T ss_pred CCcCCCCC-CCeEEECC--CCCCceecccCCC
Confidence 46999987 68899998 8999999999743
No 166
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=74.53 E-value=1.2 Score=37.73 Aligned_cols=30 Identities=30% Similarity=0.670 Sum_probs=25.9
Q ss_pred CccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 760 KLLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 760 ~~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
...|.+|+. .|.+|.|. .|..+||..|...
T Consensus 8 ~~~C~vC~~-~g~ll~CD--~C~~~fH~~Cl~p 37 (66)
T 1xwh_A 8 EDECAVCRD-GGELICCD--GCPRAFHLACLSP 37 (66)
T ss_dssp CCSBSSSSC-CSSCEECS--SCCCEECTTTSSS
T ss_pred CCCCccCCC-CCCEEEcC--CCChhhcccccCC
Confidence 357999998 68999999 8999999999763
No 167
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=73.97 E-value=6.2 Score=41.69 Aligned_cols=28 Identities=11% Similarity=0.124 Sum_probs=24.9
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCC
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESN 269 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~ 269 (1112)
||--|-..|...++||+|.|+.+.....
T Consensus 5 i~~~vd~~d~~~Gawfea~i~~v~~~~~ 32 (226)
T 3ask_A 5 VNEYVDARDTNMGAWFEAQVVRVTRKAP 32 (226)
T ss_dssp TTCEEEEECTTTCCEEEEEEEEEEECC-
T ss_pred cCceEEeeecCCCceeEEEEEEEecccc
Confidence 7888999999999999999999998553
No 168
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=73.69 E-value=3.6 Score=37.09 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=44.7
Q ss_pred CCCCCCcEEEEecc-CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccc
Q 001263 332 QELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 399 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~-GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~ 399 (1112)
..+++||++.|+.. .--|-+|+|.... ...+.+.|+|.+-...--|+..+|.|....
T Consensus 9 ~~~kvGd~C~A~ys~Dg~wYrA~I~~i~-----------~~~~~~~V~fiDYGN~E~V~~~~Lrp~~~~ 66 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSEDGCIYPATIASID-----------FKRETCVVVYTGYGNREEQNLSDLLSPICE 66 (88)
T ss_dssp CCCCSSCEEEEECTTTCCEEEEEEEEEE-----------TTTTEEEEEETTTCCEEEEEGGGCBCCC--
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEec-----------CCCCEEEEEEecCCCEEEEcHHHcccCChh
Confidence 36899999999995 5569999997631 113568999998888899999999998764
No 169
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=73.27 E-value=2.8 Score=39.20 Aligned_cols=67 Identities=13% Similarity=0.043 Sum_probs=44.9
Q ss_pred ccCCCCCCCcEEEEec----cCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCccccccc
Q 001263 329 DDCQELEPGDIIWAKL----TGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 399 (1112)
Q Consensus 329 ~~~~~f~~GdlVWaK~----~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~~ 399 (1112)
.....|.+|+.|++== +|=-.+-|.|++....... .....-.|.|.|-|-+.. -||+.+.|..|++.
T Consensus 15 ~~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~----~~~~~~~Y~VHY~GWn~~WDEWV~~drllk~nee 87 (110)
T 3oa6_A 15 GMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDE----KGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDTDE 87 (110)
T ss_dssp ---CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECT----TCCEEEEEEEEETTSCGGGCEEEEGGGEEECCHH
T ss_pred CCCcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCC----cCCcccEEEEEECCcCcchhhccChhhhhcCCHH
Confidence 3345799999999943 2445688999874321110 000113599999999884 99999999999874
No 170
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=72.96 E-value=1.8 Score=37.90 Aligned_cols=60 Identities=13% Similarity=0.168 Sum_probs=45.8
Q ss_pred CCCCCCCcEEEEeccC---cCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCccccccc
Q 001263 331 CQELEPGDIIWAKLTG---HAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 399 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~G---yPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~~ 399 (1112)
...|.+|+.|+++... --|.||.|.+... ..+...|.|.|-|-+.+ -||+..+|..+...
T Consensus 3 ~~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~---------~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~~~~~ 67 (76)
T 2lcc_A 3 MEPCLTGTKVKVKYGRGKTQKIYEASIKSTEI---------DDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDK 67 (76)
T ss_dssp CCCSSTTCEEEEEEEETTEEEEEEEEEEEEEE---------ETTEEEEEEEETTSCCSSCEEEEGGGEECSSCS
T ss_pred ccccCCCCEEEEEeCCCCCCCEEEEEEEEEEc---------cCCceEEEEEeCCcCCCceEecChhhccccccc
Confidence 3579999999999862 2478999986321 22345699999998874 99999999888754
No 171
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=72.49 E-value=1 Score=37.64 Aligned_cols=30 Identities=30% Similarity=0.740 Sum_probs=25.8
Q ss_pred CccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 760 KLLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 760 ~~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
...|.+|+. .|.+|.|. .|..+||..|...
T Consensus 9 ~~~C~vC~~-~g~ll~Cd--~C~~~fH~~Cl~p 38 (61)
T 1mm2_A 9 MEFCRVCKD-GGELLCCD--TCPSSYHIHCLNP 38 (61)
T ss_dssp CSSCTTTCC-CSSCBCCS--SSCCCBCSSSSSS
T ss_pred CCcCCCCCC-CCCEEEcC--CCCHHHcccccCC
Confidence 357999997 68899999 8999999999764
No 172
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=71.58 E-value=3.9 Score=41.23 Aligned_cols=42 Identities=17% Similarity=0.310 Sum_probs=34.5
Q ss_pred CccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEcc-CCCccc
Q 001263 240 AFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYV-DGDEED 282 (1112)
Q Consensus 240 ~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yd-dg~~e~ 282 (1112)
--+|.-|-+.|+.|+.||.|.|++.++.. .-.|.|- =|..|.
T Consensus 48 ~~~G~~c~A~~~~d~~wyRa~I~~~~~~~-~~~V~fvDyGn~~~ 90 (169)
T 3ntk_A 48 LKEGALCVAQFPEDEVFYRAQIRKVLDDG-KCEVHFIDFGNNAV 90 (169)
T ss_dssp CCTTCEEEEEETTTTEEEEEEEEEECSTT-CEEEEETTTTEEEE
T ss_pred CCCCCEEEEEECCCCcEEEEEEEEECCCC-EEEEEEEecCCeEE
Confidence 34899999999999999999999998755 5667765 577766
No 173
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=70.90 E-value=3.8 Score=37.78 Aligned_cols=64 Identities=8% Similarity=0.060 Sum_probs=47.0
Q ss_pred CCCCCCcEEEEecc----CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCccccccc
Q 001263 332 QELEPGDIIWAKLT----GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 399 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~----GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~~ 399 (1112)
..|.+|+.|++.-. |=-++.|.|++...... ....+...|.|.|-|-+.. -||+.+.|..|++.
T Consensus 18 ~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~----~~~~~~~~Y~VHY~GWn~rwDEWV~edRilk~~ee 87 (101)
T 3m9q_A 18 PLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRN----EHGLRFYEYKIHFQGWRPSYDRAVRATVLLKDTEE 87 (101)
T ss_dssp CCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEEC----TTSCEEEEEEEEETTSCGGGCEEECGGGEEECCHH
T ss_pred CcccCCCEEEEEecCCCCCCcceEeEEEEEEecCC----ccccCceEEEEEeCCCCcCceeecCHHHcccCCHH
Confidence 46999999999774 55678999987533211 0012235699999998874 99999999999874
No 174
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.80 E-value=6.6 Score=35.27 Aligned_cols=56 Identities=13% Similarity=0.024 Sum_probs=44.0
Q ss_pred cCCCCCCCcEEEEec----cCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCcc
Q 001263 330 DCQELEPGDIIWAKL----TGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVI 394 (1112)
Q Consensus 330 ~~~~f~~GdlVWaK~----~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~ 394 (1112)
....|.+|+.|++.. .+=-|-+|.|..... ..+...|.|+|-|-+.+ -||+..+|.
T Consensus 6 ~~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~---------~~~~~~YyVHY~g~NkRlDEWV~~~rl~ 67 (87)
T 2eko_A 6 SGGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKD---------ISGRKLFYVHYIDFNRRLDEWVTHERLD 67 (87)
T ss_dssp SSCSCCTTCEEEBCEECTTCCEECCEEEEEEECC---------SSSCCCEEEEECSSCSCCCEEECTTTBC
T ss_pred ccccccCCCEEEEEEcccCCCCeEEEEEEEEEEE---------cCCCcEEEEEeCCCCcccccccCHhHcc
Confidence 345799999999998 366788999987432 22446799999999885 999999985
No 175
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=69.11 E-value=1.4 Score=35.20 Aligned_cols=29 Identities=31% Similarity=0.801 Sum_probs=24.2
Q ss_pred cceeecCc--CceeeecCCCCCCccccccchhh
Q 001263 762 LCSICGVS--YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 762 ~C~iC~~~--~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
.|.+|++. .+.+|.|. .|..+||..|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd--~C~~~~H~~Cl~p 32 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCD--ECNKAFHLFCLRP 32 (51)
T ss_dssp CCTTTCCSSCCSCCEECT--TTCCEECHHHHCT
T ss_pred CCCCCCCCCCCCCEEECC--CCChhhCcccCCC
Confidence 58899874 35799999 8999999999854
No 176
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=68.59 E-value=1.2 Score=42.71 Aligned_cols=35 Identities=29% Similarity=0.639 Sum_probs=28.7
Q ss_pred eEEccCCCccccccccCCc--------CCCCCCceecccccCC
Q 001263 665 FLQCDKCRMMVHARCYGEL--------EPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 665 ll~Cd~C~~~VH~~CYG~~--------~~~~~~~W~C~~C~~~ 699 (1112)
||.||.|.-.+|-.|-|+. ..|+...|.|+.|...
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 7899999999999999874 2355558999999753
No 177
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=68.47 E-value=1.2 Score=38.86 Aligned_cols=29 Identities=21% Similarity=0.635 Sum_probs=23.6
Q ss_pred cceeecCc---CceeeecCCCCCCccccccchhh
Q 001263 762 LCSICGVS---YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 762 ~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..++|++. .+.||||. .|..+||..|.-.
T Consensus 11 ~yCiC~~~~~~~~~MI~Cd--~C~~WfH~~Cvg~ 42 (75)
T 3kqi_A 11 VYCVCRLPYDVTRFMIECD--ACKDWFHGSCVGV 42 (75)
T ss_dssp EETTTTEECCTTSCEEECT--TTCCEEEHHHHTC
T ss_pred eEEECCCcCCCCCCEEEcC--CCCCCEecccccc
Confidence 34589875 46899999 7999999999843
No 178
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=67.87 E-value=6.2 Score=38.04 Aligned_cols=48 Identities=21% Similarity=0.273 Sum_probs=34.9
Q ss_pred ccCceeEEEccCCC----CeeeEEEEEeeCCCCeEEEEccCCC---ccccccccceEEE
Q 001263 241 FIGLQCKVYWPLDA----DWYSGFVVGYDSESNRHHVKYVDGD---EEDLILSNERIKF 292 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~----~~y~g~v~~~~~~~~~h~v~Yddg~---~e~l~l~~e~~~~ 292 (1112)
-+|..|.|||..+. .||.|+|+... ...+.|.|+.=+ .|++. .++++-
T Consensus 62 ~~gd~VEV~~~~~d~ep~gWw~a~I~~~k--g~f~~V~y~~~~~~~~EiV~--~~rlR~ 116 (128)
T 3h8z_A 62 TEGDEVEVYSRANEQEPCGWWLARVRMMK--GDFYVIEYAACDATYNEIVT--LERLRP 116 (128)
T ss_dssp CTTCEEEEEECC---CCCEEEEEEEEEEE--TTEEEEEETTC----CEEEC--GGGEEE
T ss_pred CCCCEEEEEecCCCCCcCccEEEEEEEee--CCEEEEEEcCCCCCcceEEe--hhheEe
Confidence 49999999999887 89999999976 468999988733 44444 344444
No 179
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=67.75 E-value=3.5 Score=41.82 Aligned_cols=44 Identities=20% Similarity=0.391 Sum_probs=28.6
Q ss_pred ccCCcccCCCeeEEccCCCccccccccCCcC---CC--CCCceecccccC
Q 001263 654 CHMDEEYQNNLFLQCDKCRMMVHARCYGELE---PV--NGVLWLCNLCRP 698 (1112)
Q Consensus 654 C~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~---~~--~~~~W~C~~C~~ 698 (1112)
|+..... +-.+|+|++|...||..|.+... .+ ..-.+.|..|..
T Consensus 10 CG~~~~~-~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 10 EENGRQL-GEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHH 58 (177)
T ss_dssp -CTTCCT-TSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTST
T ss_pred cCCCCCC-CceeEeeccccceecHHHhcccccCccccceeEEEEccccCC
Confidence 6665444 45799999999999999998432 11 122356666654
No 180
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=67.60 E-value=2.1 Score=36.07 Aligned_cols=30 Identities=30% Similarity=0.786 Sum_probs=25.8
Q ss_pred ccceeecCc----CceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVS----YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~----~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+.. .+.+|.|. .|..+||..|-..
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd--~C~~~~H~~C~~p 40 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICD--KCGQGYHQLCHTP 40 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECS--SSCCEEETTTSSS
T ss_pred CCCCCCCCCCCCCCCCEEECC--CCChHHHhhhCCC
Confidence 479999975 38999999 9999999999754
No 181
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=66.57 E-value=8 Score=32.70 Aligned_cols=54 Identities=11% Similarity=0.046 Sum_probs=41.5
Q ss_pred CCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccc
Q 001263 332 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 397 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~ 397 (1112)
..|++||-|.|.-.-=-.-||.|.... ...+...|+|+ |+.-.|+.-++|.++.
T Consensus 12 ~~f~vGddVLA~wtDGl~Y~gtI~~V~-----------~~~gtC~V~F~-D~s~~w~~~kdi~~~~ 65 (66)
T 2eqj_A 12 CKFEEGQDVLARWSDGLFYLGTIKKIN-----------ILKQSCFIIFE-DSSKSWVLWKDIQTGA 65 (66)
T ss_dssp CCSCTTCEEEEECTTSCEEEEEEEEEE-----------TTTTEEEEEET-TTEEEEEETTTEECCC
T ss_pred ccccCCCEEEEEEccCcEEEeEEEEEc-----------cCCcEEEEEEc-cCCEEEEEeecccccC
Confidence 369999999999776667789996532 12356889988 5678899999998763
No 182
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=66.48 E-value=3.4 Score=40.18 Aligned_cols=53 Identities=21% Similarity=0.589 Sum_probs=39.5
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCc-CCCCCCceecccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGEL-EPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~-~~~~~~~W~C~~C~~~ 699 (1112)
+...|.+|...-.--.|.=..|..|...|-+.|-+.. ..+....|+|..|...
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 3468999998764444556899999999999997743 2233457999999753
No 183
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=64.61 E-value=5.2 Score=37.41 Aligned_cols=66 Identities=15% Similarity=0.097 Sum_probs=45.3
Q ss_pred cCCCCCCCcEEEEeccC----cCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCccccccc
Q 001263 330 DCQELEPGDIIWAKLTG----HAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 399 (1112)
Q Consensus 330 ~~~~f~~GdlVWaK~~G----yPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~~ 399 (1112)
....|.+|+-|++.-.+ =-|.+|.|++......... .+...|.|.|.|-+.. -||+...|..|++.
T Consensus 16 ~~~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g----~~~~~Y~VHY~GWn~~wDEWV~e~rllk~~ee 87 (110)
T 3m9p_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKG----RKIPEYLIHFNGWNRSWDRWAAEDHVLRDTDE 87 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTC----CEEEEEEEEETTSCGGGCEEEEGGGEEECCHH
T ss_pred CCCcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCccc----ccceEEEEEECCCCcchhhccCHhhhhcCCHH
Confidence 34469999999997443 2467899987543211000 0124699999998773 89999999999874
No 184
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=64.53 E-value=3.9 Score=48.43 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=29.2
Q ss_pred cceEEEEEecccCeeEEecccCCCCCeEEEEce
Q 001263 947 RKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTG 979 (1112)
Q Consensus 947 ~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~G 979 (1112)
-+.|.+..++..|.||+|+++|++|++|+.-..
T Consensus 6 ~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P 38 (490)
T 3n71_A 6 MENVEVFTSEGKGRGLKATKEFWAADVIFAERA 38 (490)
T ss_dssp CTTEEEEECSSSCEEEEESSCBCTTCEEEEECC
T ss_pred CCceEEEecCCCCceEEeccCCCCCCEEEecCC
Confidence 356999999999999999999999999986544
No 185
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=64.07 E-value=4.3 Score=47.27 Aligned_cols=30 Identities=27% Similarity=0.277 Sum_probs=27.7
Q ss_pred ceEEEEEecccCeeEEecccCCCCCeEEEE
Q 001263 948 KRLAFGKSGIHGFGIFAKHPHRAGDMVIEY 977 (1112)
Q Consensus 948 ~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY 977 (1112)
..|++..++..|.||+|+++|++|++|+.-
T Consensus 7 ~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e 36 (433)
T 3qww_A 7 GGLERFCSAGKGRGLRALRPFHVGDLLFSC 36 (433)
T ss_dssp TTEEEEECTTSCEEEEESSCBCTTCEEEEE
T ss_pred CcEEEeecCCCcCeEEECCCCCCCCEEEec
Confidence 568999999999999999999999999864
No 186
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=64.03 E-value=8.1 Score=39.93 Aligned_cols=45 Identities=22% Similarity=0.390 Sum_probs=35.8
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 286 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~ 286 (1112)
+|.-|-+.++.|+.||.|.|+...+...-.....|=|..|.+.++
T Consensus 68 ~G~~c~a~~~~d~~wyRa~V~~~~~~~~~~V~~vDyG~~~~v~~~ 112 (201)
T 4b9w_A 68 IGRPCCAFFSGDGNWYRALVKEILPSGNVKVHFVDYGNVEEVTTD 112 (201)
T ss_dssp TTCEEEEEETTTTEEEEEEEEEECTTSCEEEEETTTCCEEEECGG
T ss_pred CCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEccCCEEEEEHH
Confidence 799999999999999999999987654444444556888887664
No 187
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=63.86 E-value=3.6 Score=40.98 Aligned_cols=50 Identities=24% Similarity=0.502 Sum_probs=38.7
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
...|.+|.....--.|.-..|..|...|-+.|-.. . +....|+|..|...
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~-~-~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHA-H-PEEQGWLCDPCHLA 117 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEEC-C-SSSSSCEEHHHHHH
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhcccccc-c-CCCCcEeeHHHHHH
Confidence 46999999875555567789999999999999642 2 33448999999753
No 188
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=62.90 E-value=8.3 Score=32.36 Aligned_cols=54 Identities=7% Similarity=0.153 Sum_probs=42.1
Q ss_pred CCCCCCcEEEEeccCcC-CCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccc
Q 001263 332 QELEPGDIIWAKLTGHA-MWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 397 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~GyP-wWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~ 397 (1112)
..|+.||.|.||..|-. ..||+|.+.. ..+..|.|.|=. .+.-=+..++|+|..
T Consensus 8 ~~~~vgd~VmaRW~Gd~~yYparI~Si~-----------s~~~~Y~V~fKd-gT~e~L~~kDIkp~~ 62 (66)
T 2l8d_A 8 RKYADGEVVMGRWPGSVLYYEVQVTSYD-----------DASHLYTVKYKD-GTELALKESDIRLQS 62 (66)
T ss_dssp SSSCSSCEEEEECTTSSCEEEEEEEEEE-----------TTTTEEEEEETT-SCEEEEEGGGEECSS
T ss_pred eEeecCCEEEEEcCCCccceEEEEEEec-----------cCCceEEEEecC-CCEEeechhccccch
Confidence 47999999999998855 7899998743 223458888876 777788889998873
No 189
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=62.14 E-value=4.6 Score=33.22 Aligned_cols=52 Identities=35% Similarity=0.767 Sum_probs=35.8
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCc-CCCCCCceecccccC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGEL-EPVNGVLWLCNLCRP 698 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~-~~~~~~~W~C~~C~~ 698 (1112)
++...|.||....-.++ .=-.|.-|...+-..|=|-. ......-|.|..|..
T Consensus 7 ~d~~~C~iC~KTKFADG-~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k 59 (62)
T 2a20_A 7 GDAPTCGICHKTKFADG-CGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRK 59 (62)
T ss_dssp SCCCCCSSSSCSCCCSS-CCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHH
T ss_pred CCcchhhhhccceeccC-CCccccccCCeeecccCCEeeecCCeEEEEehhhhh
Confidence 56679999988543322 23468888888888887732 234445799999963
No 190
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=61.45 E-value=3.3 Score=35.69 Aligned_cols=32 Identities=28% Similarity=0.625 Sum_probs=26.3
Q ss_pred CccceeecCc----CceeeecCCCCCCccccccchhhc
Q 001263 760 KLLCSICGVS----YGACIQCSNTTCRVAYHPLCARAA 793 (1112)
Q Consensus 760 ~~~C~iC~~~----~Ga~iqC~~~~C~~~FH~~CA~~a 793 (1112)
...|.+|+.. .+.+|.|. .|..+||..|.-..
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD--~C~~~~H~~Cl~~~ 51 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCD--MCNLAVHQECYGVP 51 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECS--SSCCEEEHHHHTCS
T ss_pred CCCCCCCCCCCCCCCCCEEECC--CCCCccccccCCCC
Confidence 3579999874 36899999 99999999997543
No 191
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=61.42 E-value=2.8 Score=42.98 Aligned_cols=29 Identities=24% Similarity=0.666 Sum_probs=23.9
Q ss_pred ccceeecCc------CceeeecCCCCCCccccccchh
Q 001263 761 LLCSICGVS------YGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 761 ~~C~iC~~~------~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
..|.+|++. .+.+|||. .|..+||..|.-
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd--~C~~W~H~~Cvg 37 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCG--KCDRWVHSKCEN 37 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECT--TTCCEEEGGGSS
T ss_pred CcCCCCcCccCCcccCCCeEECC--CCCcccchhccc
Confidence 369999874 23499999 999999999983
No 192
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=60.91 E-value=3.3 Score=37.22 Aligned_cols=31 Identities=26% Similarity=0.710 Sum_probs=25.9
Q ss_pred CccceeecCc----CceeeecCCCCCCccccccchhh
Q 001263 760 KLLCSICGVS----YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 760 ~~~C~iC~~~----~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
...|.+|+.. .+.+|.|. .|..+||..|-..
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD--~C~~~yH~~Cl~P 50 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQ--ECHNLYHQDCHKP 50 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECS--SSCCEEETTTSSS
T ss_pred CCcCCCCCCCCCCCCCceEECC--CCCCeEcCccCCC
Confidence 3579999985 37899999 8999999999643
No 193
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=60.81 E-value=2.9 Score=35.93 Aligned_cols=28 Identities=29% Similarity=0.831 Sum_probs=23.5
Q ss_pred cceeecC--cCceeeecCCCCCCccccccchh
Q 001263 762 LCSICGV--SYGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 762 ~C~iC~~--~~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
.|.+|++ ..|.+|.|. .|..+||..|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD--~C~~~yH~~Cl~ 49 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLD 49 (70)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEEGGGSS
T ss_pred CCcCCCCcCCCCCEEEcC--CCCCceecccCC
Confidence 4677876 378999999 899999999975
No 194
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=60.30 E-value=3.1 Score=37.43 Aligned_cols=29 Identities=24% Similarity=0.770 Sum_probs=25.3
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+. .|..|-|. .|..+||..|-..
T Consensus 26 ~~C~vC~~-~g~LL~CD--~C~~~fH~~Cl~P 54 (88)
T 1fp0_A 26 TICRVCQK-PGDLVMCN--QCEFCFHLDCHLP 54 (88)
T ss_dssp SCCSSSCS-SSCCEECT--TSSCEECTTSSST
T ss_pred CcCcCcCC-CCCEEECC--CCCCceecccCCC
Confidence 47999998 57899998 9999999999754
No 195
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.86 E-value=3.3 Score=36.28 Aligned_cols=28 Identities=36% Similarity=0.880 Sum_probs=24.5
Q ss_pred cceeecC--cCceeeecCCCCCCccccccchh
Q 001263 762 LCSICGV--SYGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 762 ~C~iC~~--~~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
.|.+|++ ..|.+|.|. .|..+||..|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD--~C~~~yH~~Cl~ 57 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCD--ECNVAYHIYCLN 57 (77)
T ss_dssp SCSSSCCCCCSTTEEECS--SSCCEEETTSSS
T ss_pred CCcCcCCcCCCCCEEEcC--CCCccccccccC
Confidence 5889987 478999999 999999999975
No 196
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=59.83 E-value=7.6 Score=35.21 Aligned_cols=56 Identities=7% Similarity=0.079 Sum_probs=43.2
Q ss_pred ccCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCcc
Q 001263 329 DDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVI 394 (1112)
Q Consensus 329 ~~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~ 394 (1112)
.....|.+|+.|+++- +=-|-+|.|+.... ..+...|.|+|-|-+.+ -||+..+|.
T Consensus 19 ~~~~~~~vG~kv~v~~-~~~~y~AkIl~ir~---------~~~~~~YyVHY~g~NkRlDEWV~~~rl~ 76 (92)
T 2ro0_A 19 NSVDDIIIKCQCWVQK-NDEERLAEILSINT---------RKAPPKFYVHYVNYNKRLDEWITTDRIN 76 (92)
T ss_dssp SCTTSCCTTCEEEEEE-TTEEEEEEEEEEEC---------SSSSCEEEEEETTSCTTSCEEEEGGGEE
T ss_pred cccccccCCCEEEEEE-CCEEEEEEEEEEEE---------cCCCcEEEEEeCCcCcccccccCHhHcc
Confidence 3445699999999995 44688899986321 23446799999999885 999999984
No 197
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=59.69 E-value=5.7 Score=34.66 Aligned_cols=35 Identities=31% Similarity=0.551 Sum_probs=25.9
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
...|++|...--.-...-+.|..|++.||..|...
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 46899997632111235689999999999999873
No 198
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=59.44 E-value=5.2 Score=31.53 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=25.7
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
...|++|...--.-...-+.|..|++.+|..|..
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCcCCCCceeeccCCccCEeCCCCCeECHHHhh
Confidence 3689999764311124568999999999999986
No 199
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=59.17 E-value=10 Score=31.88 Aligned_cols=55 Identities=9% Similarity=0.216 Sum_probs=41.1
Q ss_pred CCCCCCCcEEEEeccCcC-CCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccc
Q 001263 331 CQELEPGDIIWAKLTGHA-MWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 397 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyP-wWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~ 397 (1112)
...|+.||.|.||..|-. ..||+|.+.. ..+..|.|.|=. .+.-=+..++|+|.-
T Consensus 10 ~~~f~vgd~VmaRW~Gd~~yYparItSit-----------s~~~~Y~VkfKd-gT~e~L~~kDIKp~~ 65 (68)
T 2dig_A 10 SRKFADGEVVRGRWPGSSLYYEVEILSHD-----------STSQLYTVKYKD-GTELELKENDIKSGP 65 (68)
T ss_dssp CCSSCSSCEEEEECTTTCCEEEEEEEEEE-----------TTTTEEEEECTT-SCEEEEETTTEECCC
T ss_pred ceEeecCCEEEEEccCCccceEEEEEEec-----------cCCceEEEEecC-CCEEEechhccccCC
Confidence 357999999999987754 7899998743 223457788765 677778888888753
No 200
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=59.02 E-value=3.7 Score=36.92 Aligned_cols=31 Identities=29% Similarity=0.632 Sum_probs=25.6
Q ss_pred ccceeecCcC----ceeeecCCCCCCccccccchhhc
Q 001263 761 LLCSICGVSY----GACIQCSNTTCRVAYHPLCARAA 793 (1112)
Q Consensus 761 ~~C~iC~~~~----Ga~iqC~~~~C~~~FH~~CA~~a 793 (1112)
..|.+|+... +.+|.|. .|..+||..|-...
T Consensus 26 ~~C~vC~~~~s~~~~~ll~CD--~C~~~fH~~Cl~p~ 60 (88)
T 2l43_A 26 AVCSICMDGESQNSNVILFCD--MCNLAVHQECYGVP 60 (88)
T ss_dssp CCCSSCCSSSSCSEEEEEECS--SSCCCCCHHHHTCS
T ss_pred CcCCcCCCCCCCCCCCEEECC--CCCchhhcccCCCC
Confidence 5799999732 4899999 89999999997653
No 201
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=58.37 E-value=3.7 Score=46.00 Aligned_cols=35 Identities=26% Similarity=0.606 Sum_probs=26.1
Q ss_pred CcCccccccCCccc-CCCeeEEcc--CCCccccccccC
Q 001263 647 DLDKCSVCHMDEEY-QNNLFLQCD--KCRMMVHARCYG 681 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~-~~n~ll~Cd--~C~~~VH~~CYG 681 (1112)
....|.||...... +.-+-..|+ .|+..||..|.-
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~ 344 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLE 344 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGH
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHH
Confidence 44689999986544 222356899 699999999984
No 202
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=58.22 E-value=8.8 Score=34.94 Aligned_cols=57 Identities=9% Similarity=0.068 Sum_probs=43.3
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCcccccc
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLK 398 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~ 398 (1112)
...|.+|+.|+++- +=-|-+|.|+.... ..+...|.|.|-|-+.+ -||+..+|. |..
T Consensus 23 ~~~~~vG~kv~v~~-~~~~yeAeIl~ir~---------~~g~~~YYVHY~g~NkRlDEWV~~~RI~-l~~ 81 (94)
T 2rnz_A 23 VDDIIIKCQCWVQK-NDEERLAEILSINT---------RKAPPKFYVHYVNYNKRLDEWITTDRIN-LDK 81 (94)
T ss_dssp GGGCCTTEEEEEEC-SSCEEEEEEEEEEC---------SSSSCEEEEECTTSCSTTCEEEETTTBC-SSS
T ss_pred cccccCCCEEEEEE-CCEEEEEEEEEEEE---------cCCCcEEEEEeCCcCcccccccCHHHcc-ccc
Confidence 34599999999995 44688899986321 23446799999999885 999999994 443
No 203
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=57.66 E-value=15 Score=32.92 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=45.3
Q ss_pred CCCCCcEEEEecc-CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccccc
Q 001263 333 ELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGL 400 (1112)
Q Consensus 333 ~f~~GdlVWaK~~-GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~~ 400 (1112)
.+++||++-|+.. .--|..|+|.... ..+.+.|+|.+-.....|+.++|.+....|
T Consensus 27 ~~~~G~~c~a~~~~d~~wyRA~I~~~~------------~~~~~~V~fvDyGn~e~v~~~~lr~l~~~f 83 (94)
T 3fdr_A 27 TVHVGDIVAAPLPTNGSWYRARVLGTL------------ENGNLDLYFVDFGDNGDCPLKDLRALRSDF 83 (94)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEEC------------TTSCEEEEETTTCCEEEECGGGCEECCGGG
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEEC------------CCCeEEEEEEcCCCeEEEEHHHhhhcCHHH
Confidence 5789999999983 4469999997631 124589999999999999999999998763
No 204
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=56.83 E-value=9.3 Score=40.27 Aligned_cols=44 Identities=23% Similarity=0.505 Sum_probs=35.3
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEc-cCCCccccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKY-VDGDEEDLILS 286 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Y-ddg~~e~l~l~ 286 (1112)
+|.-|-+.++.|+.||.|.|+...+. +.-.|.| |=|..|.+.++
T Consensus 68 ~G~~c~a~~~~d~~WyRa~V~~~~~~-~~~~V~~vDyGn~~~v~~~ 112 (226)
T 4b9x_A 68 IGRPCCAFFSGDGNWYRALVKEILPS-GNVKVHFVDYGNVEEVTTD 112 (226)
T ss_dssp TTCEEEEEETTTTEEEEEEEEEECSS-SEEEEECTTTCCEEEEEGG
T ss_pred CCCEEEEEECCCCeEEEEEEEEECCC-CeEEEEEEecCCEEEEEHH
Confidence 79999999999999999999998764 4455555 46888887654
No 205
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=56.72 E-value=10 Score=33.78 Aligned_cols=36 Identities=25% Similarity=0.576 Sum_probs=28.3
Q ss_pred CeeEEccCCC-ccccccccCCcCCCCCCceecccccCCC
Q 001263 663 NLFLQCDKCR-MMVHARCYGELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 663 n~ll~Cd~C~-~~VH~~CYG~~~~~~~~~W~C~~C~~~~ 700 (1112)
-.||.|..|+ .+.|..|..+... ...|.|..|....
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~l~~~--~~~weC~~C~~v~ 80 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSSLRPN--SKKWECNECLPAS 80 (85)
T ss_dssp TBCEECSSSCCCEECSGGGTCCTT--CSCCCCTTTSCCS
T ss_pred EEEEeCcccCCchhHHHHhCCcCC--CCCEECCcCcccc
Confidence 4799999998 5799999986432 3379999998643
No 206
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=56.61 E-value=11 Score=40.06 Aligned_cols=44 Identities=32% Similarity=0.517 Sum_probs=36.4
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccC-CCccccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 286 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Ydd-g~~e~l~l~ 286 (1112)
-+|.-|-+.|. |+.||.|.|+..++. +.-.|.|-| |..|.+.++
T Consensus 67 ~~G~~c~a~~~-d~~wyRa~V~~~~~~-~~~~V~~vDyGn~~~v~~~ 111 (246)
T 2hqx_A 67 RRGEFCIAKFV-DGEWYRARVEKVESP-AKIHVFYIDYGNREVLPST 111 (246)
T ss_dssp CTTCEEEEECT-TSCEEEEEEEEEEET-TEEEEEETTTCCEEEECGG
T ss_pred CCCCEEEEEcC-CCCEEEEEEEEEcCC-CeEEEEEEeCCCeEEEeHH
Confidence 48999999999 999999999999864 466777766 999988653
No 207
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.46 E-value=3.7 Score=37.25 Aligned_cols=30 Identities=23% Similarity=0.711 Sum_probs=24.9
Q ss_pred ccceeecCcC--ceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSY--GACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~--Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+... +.+|.|. .|..+||..|...
T Consensus 17 ~~C~vC~~~~~~~~ll~CD--~C~~~~H~~Cl~P 48 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCD--GCDDNYHIFCLLP 48 (92)
T ss_dssp CCCSSSCCSGGGGGCEECT--TTCCEECSSSSSS
T ss_pred CCCccCCCcCCCCCEEEcC--CCCchhccccCCC
Confidence 3699999843 4699999 8999999999863
No 208
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.29 E-value=6.5 Score=34.78 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=26.0
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
...|++|...--.-...-+.|..|++.||..|...
T Consensus 28 pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 28 PTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 46899997643111235689999999999999873
No 209
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=55.75 E-value=7.5 Score=32.64 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=25.8
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
...|++|...--.-...-+.|..|++.+|..|...
T Consensus 23 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 23 PTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 46899997643111235678999999999999863
No 210
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=55.68 E-value=6.9 Score=31.14 Aligned_cols=31 Identities=23% Similarity=0.566 Sum_probs=25.1
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
...|++|...- + .-+.|..|++.+|..|...
T Consensus 14 pt~C~~C~~~l-~---qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 14 LAFCDICQKFL-L---NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CEECTTSSSEE-C---SEEECTTTTCCBCSTTSSS
T ss_pred CcCCCCccccc-c---cCCEeCCCCCeEChhHHhh
Confidence 36899997643 2 4689999999999999873
No 211
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=55.57 E-value=7.6 Score=45.04 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=27.5
Q ss_pred cceEEEEEecccCeeEEecccCCCCCeEEEE
Q 001263 947 RKRLAFGKSGIHGFGIFAKHPHRAGDMVIEY 977 (1112)
Q Consensus 947 ~~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY 977 (1112)
...+....++..|.||+|+++|++|++|+.-
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e 34 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFRS 34 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEEE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEec
Confidence 4567888899999999999999999999863
No 212
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.57 E-value=3.8 Score=35.21 Aligned_cols=30 Identities=37% Similarity=0.845 Sum_probs=23.5
Q ss_pred cceeecC-cCceeeecCCCCC-Cccccccchhh
Q 001263 762 LCSICGV-SYGACIQCSNTTC-RVAYHPLCARA 792 (1112)
Q Consensus 762 ~C~iC~~-~~Ga~iqC~~~~C-~~~FH~~CA~~ 792 (1112)
.| +|++ ..|.||+|....| ..+||..|.-.
T Consensus 8 yC-~C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl 39 (70)
T 1x4i_A 8 YC-ICNQVSYGEMVGCDNQDCPIEWFHYGCVGL 39 (70)
T ss_dssp CS-TTSCCCCSSEECCSCTTCSCCCEEHHHHTC
T ss_pred EE-EcCCCCCCCEeEeCCCCCCccCCccccccc
Confidence 45 5887 4789999996666 48999999864
No 213
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=53.52 E-value=9.3 Score=33.36 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=30.6
Q ss_pred CccCceeEEEccC--CCCeeeEEEEEeeCCCC--eEEEEccC
Q 001263 240 AFIGLQCKVYWPL--DADWYSGFVVGYDSESN--RHHVKYVD 277 (1112)
Q Consensus 240 ~~vg~~~~v~wp~--d~~~y~g~v~~~~~~~~--~h~v~Ydd 277 (1112)
-.||.+|.|+|++ +..||.++|..-+...+ +..|-|..
T Consensus 6 ~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~g 47 (76)
T 2lcc_A 6 CLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYG 47 (76)
T ss_dssp SSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETT
T ss_pred cCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCC
Confidence 3499999999994 37999999999886555 56788874
No 214
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=53.41 E-value=38 Score=34.44 Aligned_cols=122 Identities=16% Similarity=0.199 Sum_probs=68.4
Q ss_pred cCceeEEEcc---CCCCeeeEEEEEeeCCCCeEEEEccCCCccccccccceEEEEecchhhhhhhhcccccCCCCCCCCc
Q 001263 242 IGLQCKVYWP---LDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDY 318 (1112)
Q Consensus 242 vg~~~~v~wp---~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~ 318 (1112)
+|..|-.+=. .+..|.-+.|++|+..+++..|.=.|.+ .++ .+.++..++--|-.... +
T Consensus 47 ~G~~VAakvk~~~~~~~WILa~Vv~~~~~~~rYeV~D~d~e------g~~--~~~~s~~~IIPLP~~~a---------~- 108 (180)
T 3mea_A 47 PGDKVAARVKAVDGDEQWILAEVVSYSHATNKYEVDDIDEE------GKE--RHTLSRRRVIPLPQWKA---------N- 108 (180)
T ss_dssp TTCEEEEEEECCC--EEEEEEEEEEEETTTTEEEEEECCTT------CCE--EEEEEGGGEEECCSBBC---------C-
T ss_pred CCCEEEEEcCCCCCCccEEEEEEEEEcCCCCEEEEecCCCC------Cce--eEEeCHHHEEECCCcCC---------C-
Confidence 4555443321 3478999999999998888877544432 223 34444443333321000 0
Q ss_pred hhHHhhhcccccCCCCCCCcEEEEeccCcC-CCCceeecCccccCccccccCCCCCcEEEEEeCCCC---E---EEeeCC
Q 001263 319 DEMVVLAASLDDCQELEPGDIIWAKLTGHA-MWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD---F---ARINVK 391 (1112)
Q Consensus 319 de~~~~a~~~~~~~~f~~GdlVWaK~~GyP-wWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~---~---awv~~~ 391 (1112)
...+....|..|..|+|....=- .-||.|+..+. ...+.|.|.|=|+.+ + --|+.+
T Consensus 109 -------p~t~~~~~f~~G~~VLAlYP~TT~FY~A~V~~~p~----------~~~~~y~L~FEdde~~dG~sp~~~V~~R 171 (180)
T 3mea_A 109 -------PETDPEALFQKEQLVLALYPQTTCFYRALIHAPPQ----------RPQDDYSVLFEDTSYADGYSPPLNVAQR 171 (180)
T ss_dssp -------TTTCGGGSCCTTCEEEEECTTSSEEEEEEEEECCS----------STTCCEEEEEBCTTSTTSBCCCEEECGG
T ss_pred -------cccCccccCCCCCEEEEeCCCCceeeEEEEecCCC----------CCCCcEEEEEcCCCccCCCCCCcEecce
Confidence 00011234999999999866522 56799976421 223679999888752 2 456666
Q ss_pred Ccccccc
Q 001263 392 QVISFLK 398 (1112)
Q Consensus 392 ~l~~f~~ 398 (1112)
-+++|.+
T Consensus 172 yVv~~ke 178 (180)
T 3mea_A 172 YVVACKE 178 (180)
T ss_dssp GEEEC--
T ss_pred EEEccCC
Confidence 6666654
No 215
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=53.32 E-value=8.6 Score=37.31 Aligned_cols=59 Identities=14% Similarity=0.230 Sum_probs=43.8
Q ss_pred CCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCcccccc
Q 001263 332 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLK 398 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~ 398 (1112)
..|.+|+.|+++...--|.+|.|+...... ..+...|.|.|-|-+.+ -||+..+| .|..
T Consensus 11 ~~~~vGe~v~~~~~d~~~y~AkIl~i~~~~-------~~~~~~YyVHY~gwNkR~DEWV~~~ri-~~~~ 71 (133)
T 1wgs_A 11 VTVEIGETYLCRRPDSTWHSAEVIQSRVND-------QEGREEFYVHYVGFNRRLDEWVDKNRL-ALTK 71 (133)
T ss_dssp CCCCTTSEEEEEETTTEEEEEEEEEEEEET-------TTTEEEEEEECTTTCSSCCEEECTTTS-CCTT
T ss_pred cccCCCCEEEEEeCCCCEEEEEEEEEEecc-------CCCceEEEEeccCcCCCceeecChhhc-cccc
Confidence 369999999999863468899998743211 12345699999998884 99999999 4544
No 216
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=53.02 E-value=6 Score=33.20 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=25.4
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
...|++|...--.-...-+.|..|++.+|..|..
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 53 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 53 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCcccccChhhhccCceeeECCCCCCeEchhHhh
Confidence 4689999764211123568999999999999986
No 217
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=52.67 E-value=11 Score=36.54 Aligned_cols=36 Identities=28% Similarity=0.350 Sum_probs=29.2
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeC----CCCeEEEEccC
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDS----ESNRHHVKYVD 277 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~----~~~~h~v~Ydd 277 (1112)
-||.+|.|+|+ |..||.+.|..-.. ...+..|.|.+
T Consensus 14 ~vGe~v~~~~~-d~~~y~AkIl~i~~~~~~~~~~YyVHY~g 53 (133)
T 1wgs_A 14 EIGETYLCRRP-DSTWHSAEVIQSRVNDQEGREEFYVHYVG 53 (133)
T ss_dssp CTTSEEEEEET-TTEEEEEEEEEEEEETTTTEEEEEEECTT
T ss_pred CCCCEEEEEeC-CCCEEEEEEEEEEeccCCCceEEEEeccC
Confidence 49999999998 78999999998664 23467888874
No 218
>4h75_A Spindlin-1; tudor domain, H3K4ME3 binding, methylation, gene regulation; HET: M3L NHE; 2.10A {Homo sapiens} PDB: 2ns2_A
Probab=52.50 E-value=20 Score=36.66 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=33.3
Q ss_pred CCCCccCceeEEEccCCC---CeeeEEEEEeeCCCC-eEEEEccC
Q 001263 237 DPKAFIGLQCKVYWPLDA---DWYSGFVVGYDSESN-RHHVKYVD 277 (1112)
Q Consensus 237 ~~~~~vg~~~~v~wp~d~---~~y~g~v~~~~~~~~-~h~v~Ydd 277 (1112)
+...+||+||.=-|-..+ +-.+|+|.+.=|.+- ...|+||-
T Consensus 25 ~~~nIVGCRIsH~WKEg~epvt~Wk~tVL~Qlp~npSLYLvKYDg 69 (238)
T 4h75_A 25 PRRNIVGCRIQHGWKEGNGPVTQWKGTVLDQVPVNPSLYLIKYDG 69 (238)
T ss_dssp CCCCCTTCEEEEEEECTTSCEEEEEEEEEEECTTCTTCEEEEETT
T ss_pred cCCceeEEeeecccccCCCccceeeEEEeeeccCCCcEEEEEecC
Confidence 356899999999998854 668999999877665 78899983
No 219
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=52.44 E-value=23 Score=31.78 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=44.7
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCC-E-EEeeCC--Cccccccc
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD-F-ARINVK--QVISFLKG 399 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~-~-awv~~~--~l~~f~~~ 399 (1112)
...|++|.-|=|.=.--||.||.|...+ .....|.|+|-|... | -|+..+ +|.|+...
T Consensus 17 ~~~F~vGmkLEA~D~~~~~~~a~i~~v~-----------~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g~~ 78 (88)
T 2eqm_A 17 GITFEIGARLEALDYLQKWYPSRIEKID-----------YEEGKMLVHFERWSHRYDEWIYWDSNRLRPLERP 78 (88)
T ss_dssp SCCCCSSCEEEEECTTSCEEEEEEEEEE-----------TTTTEEEEEESSSTTTEEEEEETTSCCEECCCCC
T ss_pred cCcCCCCCEEEEEcCCCCeeEEEEEEEe-----------ccCCEEEEEECCCCCcccEEeeCCCCcEeccccc
Confidence 3469999999998877799999997421 123469999999877 4 999987 78888653
No 220
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=51.90 E-value=8.1 Score=32.56 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=26.1
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
...|++|...--.-...-+.|..|++.+|..|...
T Consensus 24 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 24 PTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp CCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 46899997643111235689999999999999863
No 221
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=51.54 E-value=4.3 Score=41.45 Aligned_cols=28 Identities=25% Similarity=0.679 Sum_probs=24.1
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
..|.+|+. +|..+-|. .|..+||..|..
T Consensus 5 ~~C~~C~~-~g~ll~Cd--~C~~~~H~~C~~ 32 (184)
T 3o36_A 5 DWCAVCQN-GGELLCCE--KCPKVFHLSCHV 32 (184)
T ss_dssp SSCTTTCC-CSSCEECS--SSSCEECTTTSS
T ss_pred CccccCCC-CCeeeecC--CCCcccCccccC
Confidence 46999997 68889998 899999999954
No 222
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=51.24 E-value=5.8 Score=40.25 Aligned_cols=29 Identities=10% Similarity=-0.033 Sum_probs=20.1
Q ss_pred cceeecCc---CceeeecCCCCCCccccccchhh
Q 001263 762 LCSICGVS---YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 762 ~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
.-++|+.. .-.++||. .|.++||..|-+.
T Consensus 6 ~yCYCG~~~~~~~~mLqC~--~C~qWFH~~Cl~~ 37 (177)
T 3rsn_A 6 GSVDEENGRQLGEVELQCG--ICTKWFTADTFGI 37 (177)
T ss_dssp -----CTTCCTTSCEEECT--TTCCEEEGGGGTC
T ss_pred eEEEcCCCCCCCceeEeec--cccceecHHHhcc
Confidence 35788873 44799999 8999999999873
No 223
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.75 E-value=8 Score=32.96 Aligned_cols=49 Identities=27% Similarity=0.539 Sum_probs=29.8
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
.+...|.||...-... ..+..-.|+-.||..|...-... ...|+.|+..
T Consensus 21 ~~~~~C~IC~~~~~~~--~~~~~l~C~H~fh~~Ci~~w~~~---~~~CP~Cr~~ 69 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESR--QLLRVLPCNHEFHAKCVDKWLKA---NRTCPICRAD 69 (75)
T ss_dssp SSCCEETTTTEECCBT--CEEEEETTTEEEETTHHHHHHHH---CSSCTTTCCC
T ss_pred CCCCCCeECCcccCCC--CeEEEECCCCHhHHHHHHHHHHc---CCcCcCcCCc
Confidence 3457899999754332 23444469999999997521000 1257777654
No 224
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=49.57 E-value=5.3 Score=41.64 Aligned_cols=29 Identities=24% Similarity=0.665 Sum_probs=24.7
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+. +|..|-|. .|..+||..|...
T Consensus 8 ~~C~~C~~-~g~ll~Cd--~C~~~~H~~Cl~p 36 (207)
T 3u5n_A 8 DWCAVCQN-GGDLLCCE--KCPKVFHLTCHVP 36 (207)
T ss_dssp SSBTTTCC-CEEEEECS--SSSCEECTTTSSS
T ss_pred CCCCCCCC-CCceEEcC--CCCCccCCccCCC
Confidence 46999997 67899998 8999999999743
No 225
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=49.44 E-value=7.9 Score=32.31 Aligned_cols=32 Identities=28% Similarity=0.732 Sum_probs=25.4
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
..|.+|+..-. =...-+.|..|++.+|..|-.
T Consensus 20 ~~C~~Cg~~i~-~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 20 ESCVPCGKRIK-FGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp EECTTTCCEEC-TTCEEEEESSSSCEECGGGGG
T ss_pred cccccccCEEE-EeeEeeECCCCCCeEchhHhh
Confidence 68999966432 234679999999999999975
No 226
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.02 E-value=12 Score=33.23 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=26.0
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
...|++|...--.-...-+.|..|++.||..|...
T Consensus 28 pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 28 PTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp CCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 46899997643111235689999999999999863
No 227
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.41 E-value=5.9 Score=34.62 Aligned_cols=49 Identities=20% Similarity=0.478 Sum_probs=29.5
Q ss_pred CcCccccccCCccc----------CCCeeEEccCCCccccccccCCcCCCCCCceecccccC
Q 001263 647 DLDKCSVCHMDEEY----------QNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~----------~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
+++.|.||...-.. .++.++.--.|+-.||..|...-... .-.|+.|+.
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~---~~~CP~CR~ 72 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQ---NNRCPLCQQ 72 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTT---CCBCTTTCC
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHh---CCCCCCcCC
Confidence 45679999875532 23334444479999999998621101 115777764
No 228
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=48.17 E-value=18 Score=33.47 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=44.9
Q ss_pred CCCCCcEEEEecc-CcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccccc
Q 001263 333 ELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 399 (1112)
Q Consensus 333 ~f~~GdlVWaK~~-GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~~ 399 (1112)
.+++|++|-|+.. .--|..|+|.... ..+.+.|+|..-.....|+.++|.++...
T Consensus 32 ~~~~G~~c~a~~~~d~~wyRA~V~~~~------------~~~~~~V~fvDyGn~e~v~~~~Lr~l~~~ 87 (110)
T 2diq_A 32 TVHVGDIVAAPLPTNGSWYRARVLGTL------------ENGNLDLYFVDFGDNGDCPLKDLRALRSD 87 (110)
T ss_dssp CCCTTCEEEECCTTTCSCEEEEECCCC------------SSSCEEEEETTTCCEEEECGGGCEECCHH
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEEC------------CCCeEEEEEEeCCCeEEEehHHhhcCcHH
Confidence 5789999999985 3579999997632 12458999999999999999999998765
No 229
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=48.13 E-value=11 Score=36.71 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=46.2
Q ss_pred CCCCCcEEEEeccCcCCCCceeecCccccCcccc----------------------cc---CC----CCCcEEEEEeCCC
Q 001263 333 ELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGL----------------------NK---IS----GGRSIPVQFFGTH 383 (1112)
Q Consensus 333 ~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~----------------------~~---~~----~~~~~~V~FFG~~ 383 (1112)
.|.+|+.|++.-.+ -|++|.|+........... .. .+ +...|.|.|-|-+
T Consensus 9 ~f~~gekvl~~hg~-llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GWn 87 (136)
T 2k3y_A 9 EFALGGRVLAFHGP-LMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIHYQGWK 87 (136)
T ss_dssp SCCTTSEEEEECSS-CEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEECCTTSC
T ss_pred ccCCCCEEEEEECC-eeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEEeCCcC
Confidence 59999999999854 4999999875431000000 00 00 1227999999988
Q ss_pred CE--EEeeCCCccccccc
Q 001263 384 DF--ARINVKQVISFLKG 399 (1112)
Q Consensus 384 ~~--awv~~~~l~~f~~~ 399 (1112)
.. -||+.+.|..|++.
T Consensus 88 ~rwDEWV~~dRil~~~ee 105 (136)
T 2k3y_A 88 SSWDEWVGYDRIRAYNEE 105 (136)
T ss_dssp GGGCEEEETTTEEESCHH
T ss_pred CcceeeecHhhhhhCCHh
Confidence 74 99999999999975
No 230
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=48.00 E-value=4.7 Score=35.69 Aligned_cols=34 Identities=26% Similarity=0.725 Sum_probs=29.7
Q ss_pred ccceeecC-cCceeeecCCCCCCccccccchhhcCce
Q 001263 761 LLCSICGV-SYGACIQCSNTTCRVAYHPLCARAAGLC 796 (1112)
Q Consensus 761 ~~C~iC~~-~~Ga~iqC~~~~C~~~FH~~CA~~aG~~ 796 (1112)
..|.+|++ ..+..+.|. -|...||..|-++.|+.
T Consensus 16 ~~C~VC~~~t~~~l~pCR--vC~RvfH~~CL~r~gy~ 50 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCR--VCTRVFHDGCLRRMGYI 50 (89)
T ss_dssp CCCTTTCCCCSSCCSSCS--SSSSCCCHHHHHHHTSC
T ss_pred cccCccccccccceeccc--cccccccHhhccccccc
Confidence 47999996 467888898 89999999999999986
No 231
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=47.98 E-value=4.1 Score=47.53 Aligned_cols=28 Identities=21% Similarity=0.624 Sum_probs=24.1
Q ss_pred cceeecCc---CceeeecCCCCCCccccccchh
Q 001263 762 LCSICGVS---YGACIQCSNTTCRVAYHPLCAR 791 (1112)
Q Consensus 762 ~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA~ 791 (1112)
.+|+|++. .|.||||. .|..+||..|.-
T Consensus 6 ~yCiC~~~~d~~~~MIqCD--~C~~WfH~~CVg 36 (447)
T 3kv4_A 6 VYCLCRLPYDVTRFMIECD--MCQDWFHGSCVG 36 (447)
T ss_dssp EETTTTEECCTTSCEEECT--TTCCEEEHHHHT
T ss_pred eEEeCCCcCCCCCCeEEcC--CCCcccccccCC
Confidence 46689885 58999999 899999999983
No 232
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=47.06 E-value=1.9 Score=35.93 Aligned_cols=50 Identities=22% Similarity=0.471 Sum_probs=28.6
Q ss_pred cCcCccccccCCcccCCCeeEEc--cCCCccccccccCCcCCCCCCceecccccC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQC--DKCRMMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~C--d~C~~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
++...|-||..... +..+.-| .+....||+.|+-.=....+ .+.|+.|..
T Consensus 4 ~~~~~CrIC~~~~~--~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~-~~~C~~C~~ 55 (60)
T 1vyx_A 4 EDVPVCWICNEELG--NERFRACGCTGELENVHRSCLSTWLTISR-NTACQICGV 55 (60)
T ss_dssp CSCCEETTTTEECS--CCCCCSCCCSSGGGSCCHHHHHHHHHHHT-CSBCTTTCC
T ss_pred CCCCEeEEeecCCC--CceecCcCCCCchhhhHHHHHHHHHHhCC-CCccCCCCC
Confidence 44578999987532 2234454 34455999999851100111 356666654
No 233
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=46.95 E-value=12 Score=32.30 Aligned_cols=32 Identities=22% Similarity=0.637 Sum_probs=25.8
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
....|+.|...- ...-+.|..|++.+|..|..
T Consensus 34 ~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 34 GPGWCDLCGREV---LRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp SCCBCTTTSSBC---SSCCEECTTSSCEECTGGGG
T ss_pred CCcchhhhhHHH---HhCcCccCCCCCeechhhhc
Confidence 346899998754 34568999999999999986
No 234
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.64 E-value=4.8 Score=34.88 Aligned_cols=35 Identities=26% Similarity=0.579 Sum_probs=25.7
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
...|++|...--.-...-+.|..|++.||..|...
T Consensus 28 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 28 PKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp CEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 46899997632110135689999999999999873
No 235
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=45.06 E-value=14 Score=29.18 Aligned_cols=48 Identities=27% Similarity=0.398 Sum_probs=30.3
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
++..|.||...-..+ +..+....|+-.||..|...-. .. ...|+.|+.
T Consensus 4 ~~~~C~IC~~~~~~~-~~~~~~~~C~H~f~~~Ci~~w~--~~-~~~CP~Cr~ 51 (55)
T 1iym_A 4 DGVECAVCLAELEDG-EEARFLPRCGHGFHAECVDMWL--GS-HSTCPLCRL 51 (55)
T ss_dssp CSCCCTTTCCCCCTT-SCCEECSSSCCEECTTHHHHTT--TT-CCSCSSSCC
T ss_pred CCCcCccCCccccCC-CceEECCCCCCcccHHHHHHHH--Hc-CCcCcCCCC
Confidence 456899998765432 2345556799999999985211 11 234666654
No 236
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.62 E-value=21 Score=32.03 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCccCceeEEEcc---CCCCeeeEEEEEeeCCC--CeEEEEccCC
Q 001263 239 KAFIGLQCKVYWP---LDADWYSGFVVGYDSES--NRHHVKYVDG 278 (1112)
Q Consensus 239 ~~~vg~~~~v~wp---~d~~~y~g~v~~~~~~~--~~h~v~Yddg 278 (1112)
.-.||.+|.|+++ .+..||+++|...+... .+.-|.|.+=
T Consensus 9 ~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~ 53 (87)
T 2eko_A 9 EIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDF 53 (87)
T ss_dssp SCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSS
T ss_pred cccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCC
Confidence 4459999999997 58899999999988643 3678888754
No 237
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=44.07 E-value=63 Score=38.00 Aligned_cols=107 Identities=18% Similarity=0.282 Sum_probs=65.9
Q ss_pred CCCCeeeEEEEEeeCCCCeEEEEccCCCccccccccceEEEEecchhhhhhhhcccccCCCCCCCCchhHHhhhcccccC
Q 001263 252 LDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDYDEMVVLAASLDDC 331 (1112)
Q Consensus 252 ~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~de~~~~a~~~~~~ 331 (1112)
.+..|--|+|++|++.+++..|.=.|-|.+ .+++-++.+++..+-.|-. .+..
T Consensus 403 ~~~~wi~~~~~~~~~~~~~y~v~d~~~~~~----~~~~~~~~~~~~~~~~~p~-----------------------~~~~ 455 (522)
T 3mp6_A 403 ADGEWIQCEVLKVVADGTRFEVRDPEPDEL----GNSGKVYKCNRKELLLIPP-----------------------GFPT 455 (522)
T ss_dssp --CCEEEEEEEEEETTTTEEEEEECSCBTT----BTTCEEEEECGGGEEEECS-----------------------SCCC
T ss_pred CCCCEEEEEEEEEeCCCCEEEEeCCCCCCC----CCCCeeEEccHHHEEECCC-----------------------CCcc
Confidence 357999999999999999888876655544 2333445555444433320 0112
Q ss_pred CCCCCCcEEEEeccCcC-CCCceeecCccccCccccccCCCCCcEEEEEeCCCC---EEEeeCCCccccc
Q 001263 332 QELEPGDIIWAKLTGHA-MWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD---FARINVKQVISFL 397 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~GyP-wWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~---~awv~~~~l~~f~ 397 (1112)
..|..|+.|+|-...-- .-||.|+... ..+.|.|+|=|+.+ ..-|+.+-++++-
T Consensus 456 ~~~~~~~~v~a~~p~tt~fy~a~v~~~~------------~~~~~~~~f~~~~~~~~~~~~~~~~v~~~~ 513 (522)
T 3mp6_A 456 KNYPPGTKVLARYPETTTFYPAIVIGTK------------RDGTCRLRFDGEEEVDKETEVTRRLVLPSP 513 (522)
T ss_dssp CCCCTTCEEEEECTTCSEEEEEEEEEEC------------TTSCEEEEETTC----CCEEECGGGEEECH
T ss_pred cCCCCCCEEEEECCCCcceEeEEEecCC------------CCCeEEEEecCCCCCCccccccceeEEecC
Confidence 45899999999865422 4578886521 12359999999874 3455655555553
No 238
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=43.59 E-value=24 Score=32.51 Aligned_cols=36 Identities=11% Similarity=0.126 Sum_probs=29.5
Q ss_pred CccCceeEEEccCCCCeeeEEEEEeeCCCC--eEEEEccC
Q 001263 240 AFIGLQCKVYWPLDADWYSGFVVGYDSESN--RHHVKYVD 277 (1112)
Q Consensus 240 ~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~--~h~v~Ydd 277 (1112)
--||.+|.++| +..||+++|..-+...+ +..|.|.+
T Consensus 23 f~vGekVl~~~--~~~~YeAkIl~v~~~~~~~~Y~VHY~G 60 (102)
T 2f5k_A 23 FQEGERVLCFH--GPLLYEAKCVKVAIKDKQVKYFIHYSG 60 (102)
T ss_dssp CCTTCEEEEES--SSSEEEEEEEEEEEETTEEEEEEEETT
T ss_pred cCCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCC
Confidence 34999999999 78999999998775443 78888873
No 239
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=43.12 E-value=37 Score=28.80 Aligned_cols=53 Identities=6% Similarity=0.074 Sum_probs=40.9
Q ss_pred CCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccc
Q 001263 332 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 398 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~ 398 (1112)
..|..|+-|++|-.-=-...+.|++. ...+.+|+|. |+.-.|+..++|..+..
T Consensus 14 ~~~~~geDVL~rw~DG~fYLGtIVd~-------------~~~~ClV~Fe-D~S~~Wv~~kdi~kl~~ 66 (69)
T 2xk0_A 14 VTYALQEDVFIKCNDGRFYLGTIIDQ-------------TSDQYLIRFD-DQSEQWCEPDKLRKLGG 66 (69)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEEEE-------------CSSCEEEEET-TCCEEEECTTTEECSSC
T ss_pred cccccCCeEEEEecCCCEEEEEEEec-------------CCceEEEEec-CCcceeeeHHHHHhhcC
Confidence 67999999999987766777888652 1345778876 66789999999987654
No 240
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=42.55 E-value=15 Score=43.41 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=29.2
Q ss_pred ceEEEEEecccCeeEEecccCCCCCeEEEEceee
Q 001263 948 KRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGEL 981 (1112)
Q Consensus 948 ~~l~v~~S~~~G~GlfA~~~I~~Ge~I~eY~Gev 981 (1112)
..+.+...+..|+||+|+++|++|+.|+...-.+
T Consensus 93 ~~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~l 126 (497)
T 3smt_A 93 EGFEMVNFKEEGFGLRATRDIKAEELFLWVPRKL 126 (497)
T ss_dssp TTEEEEEETTTEEEEEESSCBCTTCEEEEEEGGG
T ss_pred cceEEEEcCCCccEEEEcccCCCCCEEEEcCHHH
Confidence 4688999999999999999999999998755443
No 241
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=42.44 E-value=30 Score=32.73 Aligned_cols=42 Identities=21% Similarity=0.239 Sum_probs=34.2
Q ss_pred CCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccc
Q 001263 239 KAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEED 282 (1112)
Q Consensus 239 ~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~ 282 (1112)
+--||.+|..-|+ +..||.|+|++-... --+.|.+|||..=.
T Consensus 5 ~v~vGq~V~akh~-ngryy~~~V~~~~~~-~~y~V~F~DgS~s~ 46 (118)
T 2qqr_A 5 SITAGQKVISKHK-NGRFYQCEVVRLTTE-TFYEVNFDDGSFSD 46 (118)
T ss_dssp CCCTTCEEEEECT-TSSEEEEEEEEEEEE-EEEEEEETTSCEEE
T ss_pred eeccCCEEEEECC-CCCEEeEEEEEEeeE-EEEEEEcCCCCccC
Confidence 4459999999999 789999999996544 56999999996543
No 242
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=42.14 E-value=6 Score=46.75 Aligned_cols=27 Identities=22% Similarity=0.643 Sum_probs=23.3
Q ss_pred cceeecCc---CceeeecCCCCCCccccccch
Q 001263 762 LCSICGVS---YGACIQCSNTTCRVAYHPLCA 790 (1112)
Q Consensus 762 ~C~iC~~~---~Ga~iqC~~~~C~~~FH~~CA 790 (1112)
..|+|++. .|.||||. .|..+||..|.
T Consensus 38 ~yC~C~~~~d~~~~MIqCd--~C~~WfH~~Cv 67 (488)
T 3kv5_D 38 VYCVCRQPYDVNRFMIECD--ICKDWFHGSCV 67 (488)
T ss_dssp EETTTTEECCTTSCEEEBT--TTCCEEEHHHH
T ss_pred eEEeCCCcCCCCCCeEEcc--CCCCceeeeec
Confidence 34499985 68999999 79999999998
No 243
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=41.97 E-value=6.1 Score=39.37 Aligned_cols=46 Identities=20% Similarity=0.556 Sum_probs=34.8
Q ss_pred cCccccccCCcccCCCeeEEcc--CCCccccccccCC-------cCCCCCCceecccccC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCD--KCRMMVHARCYGE-------LEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd--~C~~~VH~~CYG~-------~~~~~~~~W~C~~C~~ 698 (1112)
+.+|.+|..++ .|+.|+ .|...|-..|.-. ..+...++|.|-.|..
T Consensus 79 ~~yC~wC~~Gg-----~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 79 QSYCTICCGGR-----EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp BSSCTTTSCCS-----EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred cceeeEecCCC-----eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 36999999764 689999 6999999999741 1223345899999975
No 244
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=41.24 E-value=10 Score=34.13 Aligned_cols=31 Identities=26% Similarity=0.653 Sum_probs=25.8
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
..|++|.... ..-+..|..|+..+|..|.-.
T Consensus 48 ~~C~~C~~~~---~~~~Y~C~~C~f~lH~~Ca~~ 78 (89)
T 1v5n_A 48 YTCDKCEEEG---TIWSYHCDECDFDLHAKCALN 78 (89)
T ss_dssp CCCTTTSCCC---CSCEEECTTTCCCCCHHHHHC
T ss_pred eEeCCCCCcC---CCcEEEcCCCCCeEcHHhcCC
Confidence 5799999764 346899999999999999754
No 245
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=40.11 E-value=6.4 Score=37.31 Aligned_cols=35 Identities=17% Similarity=0.435 Sum_probs=0.9
Q ss_pred CcCccccccCCccc-------------CCCeeEEccCCCccccccccC
Q 001263 647 DLDKCSVCHMDEEY-------------QNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~-------------~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
+++.|.||...-.. .++..+.--.|+-.||..|..
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~ 94 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCIS 94 (117)
T ss_dssp CC----------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHH
Confidence 34689999875432 111222223689999999964
No 246
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=39.56 E-value=38 Score=30.64 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=29.7
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCC--CeEEEEccCC
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSES--NRHHVKYVDG 278 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~--~~h~v~Yddg 278 (1112)
.||.+|.|++ |..||.++|..-.... .+.-|.|.+=
T Consensus 25 ~vG~kv~v~~--~~~~y~AkIl~ir~~~~~~~YyVHY~g~ 62 (92)
T 2ro0_A 25 IIKCQCWVQK--NDEERLAEILSINTRKAPPKFYVHYVNY 62 (92)
T ss_dssp CTTCEEEEEE--TTEEEEEEEEEEECSSSSCEEEEEETTS
T ss_pred cCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCc
Confidence 4999999997 8899999999877644 3678888754
No 247
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=39.44 E-value=7.5 Score=39.96 Aligned_cols=29 Identities=24% Similarity=0.770 Sum_probs=24.7
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+. +|..+-|. .|..+||..|...
T Consensus 3 ~~C~~C~~-~g~ll~Cd--~C~~~~H~~Cl~p 31 (189)
T 2ro1_A 3 TICRVCQK-PGDLVMCN--QCEFCFHLDCHLP 31 (189)
T ss_dssp CCBTTTCC-CSSCCCCT--TTCCBCCSTTSTT
T ss_pred CcCccCCC-CCceeECC--CCCchhccccCCC
Confidence 36999997 57888898 8999999999854
No 248
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=39.23 E-value=8.1 Score=35.78 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=22.6
Q ss_pred cCccccccCCcccC-------------CCeeEEccCCCccccccccC
Q 001263 648 LDKCSVCHMDEEYQ-------------NNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~-------------~n~ll~Cd~C~~~VH~~CYG 681 (1112)
++.|.||...-... ....+.--.|+-.||..|..
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~ 71 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLL 71 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHH
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHH
Confidence 46899997653211 11234456799999999985
No 249
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=38.99 E-value=9.1 Score=35.54 Aligned_cols=35 Identities=17% Similarity=0.418 Sum_probs=22.7
Q ss_pred CcCccccccCCcccC-------------CCeeEEccCCCccccccccC
Q 001263 647 DLDKCSVCHMDEEYQ-------------NNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~-------------~n~ll~Cd~C~~~VH~~CYG 681 (1112)
+++.|.||...-... ++..+.--.|+-.||..|..
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~ 83 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCIS 83 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHH
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHH
Confidence 457899997653321 11233345799999999975
No 250
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=38.95 E-value=9.9 Score=33.27 Aligned_cols=29 Identities=28% Similarity=0.797 Sum_probs=23.1
Q ss_pred cceeecCc--CceeeecCCCCCCccccccchhh
Q 001263 762 LCSICGVS--YGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 762 ~C~iC~~~--~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
.|.+|++. .+.+|.|. .|..+||..|...
T Consensus 28 ~C~vC~~~~d~~~ll~CD--~C~~~yH~~Cl~P 58 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDP 58 (77)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEETTTSSS
T ss_pred cCCccCCCCCCcceeEeC--CCCCccCcccCCC
Confidence 36777764 47889999 8999999999763
No 251
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=38.88 E-value=37 Score=32.47 Aligned_cols=66 Identities=11% Similarity=0.063 Sum_probs=45.1
Q ss_pred CCCCCcEEEEeccCcCCCCceeecCccccCccc-----------------------------cccCCCCCcEEEEEeCCC
Q 001263 333 ELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKG-----------------------------LNKISGGRSIPVQFFGTH 383 (1112)
Q Consensus 333 ~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~-----------------------------~~~~~~~~~~~V~FFG~~ 383 (1112)
.|++|+.|.+--++-+ -.|+|+.......... .......-.|.|.|.|-+
T Consensus 7 ~f~~gE~VlcfHg~~~-YeAKIl~i~d~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GWn 85 (130)
T 3e9g_A 7 EFALGGRCLAFHGPLM-YEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKCFFIHYQGWK 85 (130)
T ss_dssp CCCTTCEEEEEETTEE-EEEEEEEEEETTTTEEEECC--------------CCBCCCTTCCCCTTTTTSCEEEEEETTSC
T ss_pred cccCCCEEEEEeCCcc-eeeEEEEeeCCCcceeecccccccccccccccccccccccccccCchhhccCceEEEEeCCCC
Confidence 5899999998887774 6787776522111000 001112346999999998
Q ss_pred CE--EEeeCCCccccccc
Q 001263 384 DF--ARINVKQVISFLKG 399 (1112)
Q Consensus 384 ~~--awv~~~~l~~f~~~ 399 (1112)
.. -||+...|..|.+.
T Consensus 86 ~~WDEWV~e~rvlk~~ee 103 (130)
T 3e9g_A 86 SSWDEWVGYDRIRAYNEE 103 (130)
T ss_dssp GGGCEEEETTTEECSSHH
T ss_pred CChhhccCHhhhhccCHH
Confidence 74 99999999999875
No 252
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=38.53 E-value=9.2 Score=31.55 Aligned_cols=31 Identities=23% Similarity=0.656 Sum_probs=25.3
Q ss_pred cCccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
...|+.|+..- ...-+.|..|++.+|..|..
T Consensus 22 pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~ 52 (59)
T 1rfh_A 22 PGWCDLCGREV---LRQALRCANCKFTCHSECRS 52 (59)
T ss_dssp CEECTTTCSEE---CSCCEECTTTSCEECHHHHT
T ss_pred CeEchhcchhh---hhCccEeCCCCCeEehhhhh
Confidence 46899997754 24568999999999999986
No 253
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=38.42 E-value=13 Score=33.22 Aligned_cols=49 Identities=22% Similarity=0.586 Sum_probs=36.1
Q ss_pred cCccccccCC--cccCCCeeEEccCCCccccccccCCcCCCCCCceecccccC
Q 001263 648 LDKCSVCHMD--EEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 648 ~~~C~VC~~~--~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
..+|.||+.. -..+.+.++-|.-|+..|-..||--.. -++ .-.|..|..
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYEr-keG-~q~CpqCkt 66 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYER-REG-TQNCPQCKT 66 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHH-HTS-CSSCTTTCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHH-hcc-CccccccCC
Confidence 3699999874 234566899999999999999996221 223 556888875
No 254
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.14 E-value=13 Score=30.74 Aligned_cols=51 Identities=16% Similarity=0.350 Sum_probs=31.0
Q ss_pred cCcCccccccCCcccC--CCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQ--NNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~--~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
.+...|.||...-... ....+.--.|+-.||..|...-... .-.|+.|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~ 65 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKK 65 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH---CSSCTTTCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc---CCCCCCCCCc
Confidence 3457899999864322 2234455689999999998521000 1247777643
No 255
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.09 E-value=35 Score=28.41 Aligned_cols=49 Identities=14% Similarity=0.393 Sum_probs=30.8
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
.+...|.||...-. +..+. .|+-.||..|........+..-.|+.|...
T Consensus 18 ~~~~~C~IC~~~~~---~~~~~--~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 18 QEEVICPICLDILQ---KPVTI--DCGHNFCLKCITQIGETSCGFFKCPLCKTS 66 (73)
T ss_dssp CCCCBCTTTCSBCS---SEEEC--TTCCEEEHHHHHHHCSSSCSCCCCSSSCCC
T ss_pred ccCCEeccCCcccC---CeEEc--CCCChhhHHHHHHHHHcCCCCCCCCCCCCc
Confidence 34579999987543 34443 899999999976322111224568888754
No 256
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=38.04 E-value=15 Score=29.31 Aligned_cols=29 Identities=28% Similarity=0.744 Sum_probs=23.5
Q ss_pred CccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 649 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 649 ~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
..|++|+..-- . =+.|..|+..+|+.|-.
T Consensus 15 t~C~~C~k~i~-~---G~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSMI-F---GVKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSSC-C---EEEETTTTEEESSSCTT
T ss_pred cCccccCceeE-C---cCCCCCCCCccchhhcC
Confidence 68999987542 1 17899999999999976
No 257
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=37.69 E-value=14 Score=30.72 Aligned_cols=50 Identities=20% Similarity=0.361 Sum_probs=29.8
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~~ 700 (1112)
++...|.||...-.... .+..-.|+-.||..|...-... ...|+.|+...
T Consensus 12 ~~~~~C~IC~~~~~~~~--~~~~~~C~H~fc~~Ci~~~~~~---~~~CP~Cr~~~ 61 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGE--DVRRLPCMHLFHQVCVDQWLIT---NKKCPICRVDI 61 (69)
T ss_dssp TCCCSBTTTTBCCCSSS--CEEECTTSCEEEHHHHHHHHHH---CSBCTTTCSBS
T ss_pred CCCCCCeeCCccccCCC--cEEEeCCCCHHHHHHHHHHHHc---CCCCcCcCccc
Confidence 34568999987543222 2334469999999997521100 12488887543
No 258
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=36.25 E-value=11 Score=36.86 Aligned_cols=29 Identities=28% Similarity=0.560 Sum_probs=25.5
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.+|+. +|..+-|. .|..+||..|-..
T Consensus 64 d~C~vC~~-GG~LlcCD--~Cpr~Fh~~Cl~p 92 (142)
T 2lbm_A 64 EQCRWCAE-GGNLICCD--FCHNAFCKKCILR 92 (142)
T ss_dssp CSCSSSCC-CSSEEECS--SSCCEEEHHHHHH
T ss_pred CeecccCC-CCcEEeCC--CCCCeeeHhhcCC
Confidence 47999998 78888887 9999999999864
No 259
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=36.25 E-value=19 Score=28.27 Aligned_cols=48 Identities=23% Similarity=0.547 Sum_probs=29.6
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
++..|.||...-... +..+..-.|+-.||..|...-... ...|+.|+.
T Consensus 4 ~~~~C~IC~~~~~~~-~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~ 51 (55)
T 2ecm_A 4 GSSGCPICLEDIHTS-RVVAHVLPCGHLLHRTCYEEMLKE---GYRCPLCSG 51 (55)
T ss_dssp CCCSCTTTCCCCCTT-TSCEEECTTSCEEETTHHHHHHHH---TCCCTTSCC
T ss_pred CCCcCcccChhhcCC-CcCeEecCCCCcccHHHHHHHHHc---CCcCCCCCC
Confidence 346899998764322 234455679999999998521100 135777764
No 260
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=35.44 E-value=12 Score=45.95 Aligned_cols=80 Identities=25% Similarity=0.362 Sum_probs=0.0
Q ss_pred ccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceec---------------ccccCCCCCCCCCcccC----
Q 001263 650 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLC---------------NLCRPGAPEPPPPCCLC---- 710 (1112)
Q Consensus 650 ~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C---------------~~C~~~~~~~~~~C~LC---- 710 (1112)
.|++|...--.-...=+.|..|++.||..| ...++.. | ..-....-.....|..|
T Consensus 50 ~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C--~~~v~~~----c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l 123 (674)
T 3pfq_A 50 FCSHCTDFIWGFGKQGFQCQVCSFVVHKRC--HEFVTFS----CPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLL 123 (674)
T ss_dssp ----------------------------------------------------------CCCCCEECCSSCCCCSSSCSCC
T ss_pred ccccccccccccCCceeECCCCCCCcChhh--cCcCccc----CCCcccccccccccCCcceeecCCCCCCCCCcccccc
Q ss_pred -CCCCCCceecCCCceeeeecccccc
Q 001263 711 -PVVGGAMKPTTDGRWAHLACAIWIP 735 (1112)
Q Consensus 711 -~~~gGalK~t~~g~WvHv~Cal~~p 735 (1112)
+...-.++...++.-||..|+...|
T Consensus 124 ~g~~~qg~~C~~C~~~~H~~C~~~v~ 149 (674)
T 3pfq_A 124 YGLIHQGMKCDTCMMNVHKRCVMNVP 149 (674)
T ss_dssp BBSSSCEECCSSSCCCBCSSTTSSSC
T ss_pred chhhcCccccccCCcchhhhhhhccC
No 261
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=34.26 E-value=18 Score=25.70 Aligned_cols=24 Identities=21% Similarity=0.695 Sum_probs=19.6
Q ss_pred CceecccccCCCCCCCCCcccCCC
Q 001263 689 VLWLCNLCRPGAPEPPPPCCLCPV 712 (1112)
Q Consensus 689 ~~W~C~~C~~~~~~~~~~C~LC~~ 712 (1112)
..|-|..|.+........|..|..
T Consensus 5 ~~W~C~~CTf~N~~~~~~Ce~C~~ 28 (31)
T 1nj3_A 5 AMWACQHCTFMNQPGTGHCEMCSL 28 (31)
T ss_dssp CCEECSSSCCEECSSCSSCSSSCC
T ss_pred ccccCCcccccCCCCCCccCCcCC
Confidence 479999999877666778998864
No 262
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=33.59 E-value=15 Score=32.65 Aligned_cols=33 Identities=30% Similarity=0.571 Sum_probs=24.5
Q ss_pred CccccccCCc-ccCCCeeEEccCCCccccccccC
Q 001263 649 DKCSVCHMDE-EYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 649 ~~C~VC~~~~-~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
.+|.||...= ....-.-+.|.=|++.||..|+.
T Consensus 39 s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~ 72 (84)
T 1r79_A 39 AKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp CBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred CEeCCCCCEeCCccCCCCCCCcccChhHHHHHHH
Confidence 5999998752 22222456899999999999986
No 263
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=33.44 E-value=30 Score=31.25 Aligned_cols=58 Identities=9% Similarity=0.162 Sum_probs=43.9
Q ss_pred CCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCE--EEeeCCCcccccc
Q 001263 335 EPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLK 398 (1112)
Q Consensus 335 ~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~--awv~~~~l~~f~~ 398 (1112)
.+|..|+++..+=-|-+|.|+..... +...+...|.|.|-|-+.+ -||+..+|..+.+
T Consensus 16 ~~~e~vlc~~~dg~~yeAeIl~ir~~------~~~~~~~~YYVHY~g~NkRlDEWV~~~RL~~~~~ 75 (92)
T 2bud_A 16 NPDKIYFIRREDGTVHRGQVLQSRTT------ENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNAD 75 (92)
T ss_dssp CTTSCEEEECTTSCEEEEEEEEEECT------TTCSSCCEEEEECSSSCTTTCEEEETTTEESCHH
T ss_pred CCCCEEEEEeCCCCEEEEEEEEEeec------cCCCCCcEEEEEeCCcccccccccCHHHhchhcc
Confidence 46889999996667889999874321 1112345799999999885 9999999998875
No 264
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=33.13 E-value=18 Score=32.39 Aligned_cols=31 Identities=29% Similarity=0.365 Sum_probs=24.3
Q ss_pred CCCcccCCCCC-CCceecC---CCceeeeeccccc
Q 001263 704 PPPCCLCPVVG-GAMKPTT---DGRWAHLACAIWI 734 (1112)
Q Consensus 704 ~~~C~LC~~~g-GalK~t~---~g~WvHv~Cal~~ 734 (1112)
...|.+|..++ ||-.+.. +...+|+.||...
T Consensus 17 ~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~a 51 (87)
T 2lq6_A 17 KLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKA 51 (87)
T ss_dssp CCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHH
T ss_pred cCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHC
Confidence 35799998774 8877664 6689999999864
No 265
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=33.00 E-value=12 Score=32.64 Aligned_cols=52 Identities=23% Similarity=0.529 Sum_probs=32.3
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGA 700 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~~ 700 (1112)
+++..|.||...-...+-.++.| .||-.|++.|+..... .....|+.|+...
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~--~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT--DENGLCPACRKPY 60 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT--SSCSBCTTTCCBC
T ss_pred ccCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh--cCCCCCCCCCCcc
Confidence 34578999998543222234445 6888888888753211 1257899998643
No 266
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.92 E-value=16 Score=31.74 Aligned_cols=31 Identities=23% Similarity=0.599 Sum_probs=24.7
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
....|.||...-.. -+.|..|+..||..|..
T Consensus 14 ~i~~C~IC~~~i~~----g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 14 AVKICNICHSLLIQ----GQSCETCGIRMHLPCVA 44 (74)
T ss_dssp SSCBCSSSCCBCSS----SEECSSSCCEECHHHHH
T ss_pred CCCcCcchhhHccc----CCccCCCCchhhHHHHH
Confidence 44689999986532 25799999999999986
No 267
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=32.75 E-value=7.9 Score=44.08 Aligned_cols=67 Identities=25% Similarity=0.612 Sum_probs=45.1
Q ss_pred cCccccccCCcccCCCeeEEcc--CCCccccccccCCc-------CCCCCCceecccccCCCCCCCCCcccCCCCCCCce
Q 001263 648 LDKCSVCHMDEEYQNNLFLQCD--KCRMMVHARCYGEL-------EPVNGVLWLCNLCRPGAPEPPPPCCLCPVVGGAMK 718 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~~n~ll~Cd--~C~~~VH~~CYG~~-------~~~~~~~W~C~~C~~~~~~~~~~C~LC~~~gGalK 718 (1112)
+..|.+|..++ .++.|+ .|...|-..|.... .+...+.|.|-.|.... ..|.++
T Consensus 93 ~~yCr~C~~Gg-----~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p------------~~~ll~ 155 (386)
T 2pv0_B 93 QSYCSICCSGE-----TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS------------RSGLLQ 155 (386)
T ss_dssp BCSCTTTCCCS-----SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC------------EETTEE
T ss_pred cccceEcCCCC-----eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc------------hHhhhh
Confidence 36999999765 589999 89999999997421 22233579999997531 234455
Q ss_pred ecCCCceeeeecccc
Q 001263 719 PTTDGRWAHLACAIW 733 (1112)
Q Consensus 719 ~t~~g~WvHv~Cal~ 733 (1112)
+-. .|..-+..++
T Consensus 156 ~r~--~w~~~~~~f~ 168 (386)
T 2pv0_B 156 RRR--KWRSQLKAFY 168 (386)
T ss_dssp BCS--SHHHHHHHHH
T ss_pred hhh--hHHHHHHHHH
Confidence 433 5766666665
No 268
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=32.44 E-value=23 Score=41.22 Aligned_cols=34 Identities=18% Similarity=0.485 Sum_probs=27.2
Q ss_pred ceEEEEEe-cccCeeEEecccCCCCCeEEEEceee
Q 001263 948 KRLAFGKS-GIHGFGIFAKHPHRAGDMVIEYTGEL 981 (1112)
Q Consensus 948 ~~l~v~~S-~~~G~GlfA~~~I~~Ge~I~eY~Gev 981 (1112)
+.|.|... ...|+||||+++|++|+.|+...-.+
T Consensus 38 ~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~~ 72 (449)
T 3qxy_A 38 PKVAVSRQGTVAGYGMVARESVQAGELLFVVPRAA 72 (449)
T ss_dssp TTEEEESSSCSSSSEEEESSCBCTTCEEEEEEGGG
T ss_pred CceEEEecCCCceEEEEECCCCCCCCEEEEeCcHH
Confidence 46777764 47899999999999999998755443
No 269
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=32.14 E-value=69 Score=29.06 Aligned_cols=37 Identities=19% Similarity=0.256 Sum_probs=30.0
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCC--CeEEEEccCCC
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSES--NRHHVKYVDGD 279 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~--~~h~v~Yddg~ 279 (1112)
.||.+|.|++ |..||+++|.+-.... .+.-|-|.+=.
T Consensus 27 ~vG~kv~v~~--~~~~yeAeIl~ir~~~g~~~YYVHY~g~N 65 (94)
T 2rnz_A 27 IIKCQCWVQK--NDEERLAEILSINTRKAPPKFYVHYVNYN 65 (94)
T ss_dssp CTTEEEEEEC--SSCEEEEEEEEEECSSSSCEEEEECTTSC
T ss_pred cCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcC
Confidence 4999999997 8899999999877644 36788887653
No 270
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=31.86 E-value=48 Score=31.59 Aligned_cols=39 Identities=23% Similarity=0.388 Sum_probs=31.1
Q ss_pred CCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCC
Q 001263 239 KAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGD 279 (1112)
Q Consensus 239 ~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~ 279 (1112)
-...|..|+|-|++.. -|.|...+... ....+|..+||.
T Consensus 64 pP~~G~~V~V~W~DG~-~y~a~f~g~~~-~~~YtV~FeDgs 102 (123)
T 2xdp_A 64 PPAEGEVVQVKWPDGK-LYGAKYFGSNI-AHMYQVEFEDGS 102 (123)
T ss_dssp CCCTTCEEEEECTTSC-EEEEEEEEEEE-EEEEEEECTTSC
T ss_pred CCCCCCEEEEEcCCCC-EEeEEEeeeee-EEEEEEEECCCC
Confidence 3458999999998665 79999998873 445789999996
No 271
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.91 E-value=17 Score=31.51 Aligned_cols=30 Identities=27% Similarity=0.608 Sum_probs=25.0
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhh
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 792 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~ 792 (1112)
..|.||....-..+.|. .|...||..|..+
T Consensus 16 ~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCE--TCGIRMHLPCVAK 45 (74)
T ss_dssp CBCSSSCCBCSSSEECS--SSCCEECHHHHHH
T ss_pred CcCcchhhHcccCCccC--CCCchhhHHHHHH
Confidence 47999998655567887 9999999999965
No 272
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=30.88 E-value=61 Score=30.65 Aligned_cols=48 Identities=19% Similarity=0.344 Sum_probs=35.1
Q ss_pred CCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccccccccceE
Q 001263 239 KAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERI 290 (1112)
Q Consensus 239 ~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l~~e~~ 290 (1112)
-...|..|+|-|++. .-|.|+..+... ....+|..+||.. |.+..+.|
T Consensus 63 pP~~G~~V~V~W~DG-~~y~a~f~g~~~-~~~Y~V~feDgs~--~~~kR~~i 110 (118)
T 2qqr_A 63 PPAEGEVVQVRWTDG-QVYGAKFVASHP-IQMYQVEFEDGSQ--LVVKRDDV 110 (118)
T ss_dssp CCCTTCEEEEECTTS-CEEEEEEEEEEE-EEEEEEEETTSCE--EEECGGGE
T ss_pred CCCCCCEEEEEcCCC-CEeeeEEeceeE-EEEEEEEECCCCE--EEEcHHHe
Confidence 345899999999877 479999888763 3457889999984 44444444
No 273
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=30.87 E-value=20 Score=34.12 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=34.3
Q ss_pred CCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCccc
Q 001263 239 KAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEED 282 (1112)
Q Consensus 239 ~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~ 282 (1112)
.--||.+|..-|+ +..||.|+|++-.. .-.+.|.+|||..=.
T Consensus 6 ~v~vGq~V~ak~~-ngryy~~~V~~~~~-~~~y~V~F~DgS~s~ 47 (123)
T 2xdp_A 6 VISVGQTVITKHR-NTRYYSCRVMAVTS-QTFYEVMFDDGSFSR 47 (123)
T ss_dssp CCCTTCCCCCCCC-CCCCCCCEEEEEEE-EEEEEEEETTSCEEE
T ss_pred ccccCCEEEEECC-CCcEEeEEEEEEee-EEEEEEEcCCCCccC
Confidence 4458999999998 58999999999885 456999999996543
No 274
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=30.80 E-value=31 Score=27.84 Aligned_cols=29 Identities=24% Similarity=0.451 Sum_probs=22.8
Q ss_pred CCCCceecccccCCCCCCCCCcccCCCCC
Q 001263 686 VNGVLWLCNLCRPGAPEPPPPCCLCPVVG 714 (1112)
Q Consensus 686 ~~~~~W~C~~C~~~~~~~~~~C~LC~~~g 714 (1112)
+++..|-|..|.+......+.|..|....
T Consensus 6 ~~~~~W~Cp~CTf~N~p~~~~CemC~~pr 34 (52)
T 2crc_A 6 SGPVGWQCPGCTFINKPTRPGCEMCCRAR 34 (52)
T ss_dssp CCSSSBCCTTTCCCBCTTCSSCSSSCCCC
T ss_pred CCCCCccCCCcccccCCCCCeeCCCCCcC
Confidence 44458999999998777778999997543
No 275
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=30.68 E-value=17 Score=32.38 Aligned_cols=33 Identities=18% Similarity=0.513 Sum_probs=24.9
Q ss_pred cCccccccCCcccC-CCe--eEEccCCCccccccccC
Q 001263 648 LDKCSVCHMDEEYQ-NNL--FLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~-~n~--ll~Cd~C~~~VH~~CYG 681 (1112)
...|+.|...- ++ ..+ -+.|..|++.+|..|..
T Consensus 35 PT~Cd~C~~~l-WGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 35 PTNCEACMKPL-WHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp CEECSSSSSEE-CCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred CcchhhcCHhh-hccccCCCCCEecCCCCccchhHhC
Confidence 35899997632 22 122 78899999999999997
No 276
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=29.65 E-value=1.1e+02 Score=27.35 Aligned_cols=48 Identities=21% Similarity=0.319 Sum_probs=37.4
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCC---CccccccccceE
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDG---DEEDLILSNERI 290 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg---~~e~l~l~~e~~ 290 (1112)
||.+|.+.-+.. .||.+.|+.-+....+-.|.||.= --||+.....++
T Consensus 22 vGmkLEA~D~~~-~~~~a~i~~v~~~~~~v~VHfdGW~~~yDeWv~~dS~~I 72 (88)
T 2eqm_A 22 IGARLEALDYLQ-KWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRL 72 (88)
T ss_dssp SSCEEEEECTTS-CEEEEEEEEEETTTTEEEEEESSSTTTEEEEEETTSCCE
T ss_pred CCCEEEEEcCCC-CeeEEEEEEEeccCCEEEEEECCCCCcccEEeeCCCCcE
Confidence 999999997665 799999999998888899999822 346666655444
No 277
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.38 E-value=1e+02 Score=25.58 Aligned_cols=55 Identities=15% Similarity=0.066 Sum_probs=40.9
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccccc
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 397 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~ 397 (1112)
...|+.|+-|+|+-+-=-.-||.|..... ......|+|+ |+.-.|+.-++|.+..
T Consensus 5 ~~~f~eGqdVLarWsDGlfYlgtV~kV~~-----------~~~~ClV~Fe-D~s~~wv~~kdi~~~~ 59 (63)
T 2e5q_A 5 SSGLTEGQYVLCRWTDGLYYLGKIKRVSS-----------SKQSCLVTFE-DNSKYWVLWKDIQHAG 59 (63)
T ss_dssp CCCCCTTCEEEEECTTSCEEEEEECCCCS-----------TTSEEEEEET-TSCEEEEEGGGEECCS
T ss_pred ccceecCCEEEEEecCCCEEEEEEEEEec-----------CCCEEEEEEc-cCceeEEEeecccccC
Confidence 45799999999998777777899865321 1234678876 6677899999988764
No 278
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.15 E-value=23 Score=30.75 Aligned_cols=53 Identities=13% Similarity=0.239 Sum_probs=30.9
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
.+...|.||...........+.- .|+-.||..|+.......+....|+.|...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLL-HCGHTICRQCLEKLLASSINGVRCPFCSKI 65 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEEC-SSSCEEEHHHHHHHHHHCSSCBCCTTTCCC
T ss_pred cCCCCCccCCccccccCCCeEEC-CCCChhhHHHHHHHHHcCCCCcCCCCCCCc
Confidence 34578999987654332212332 699999999985211111124567777653
No 279
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=28.76 E-value=95 Score=26.19 Aligned_cols=46 Identities=17% Similarity=0.282 Sum_probs=34.8
Q ss_pred cCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCC---Cccccccccc
Q 001263 242 IGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDG---DEEDLILSNE 288 (1112)
Q Consensus 242 vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg---~~e~l~l~~e 288 (1112)
||.++.+.=+... ||.++|+.-|...++-.|.||.= -.||+.....
T Consensus 15 vGmkLEa~d~~~p-~~~AtV~~v~~~~~~~~VhfdGw~~~~D~W~~~dS~ 63 (69)
T 3sd4_A 15 VGAQLEARDRLKN-WYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSP 63 (69)
T ss_dssp TTCEEEEECTTSC-EEEEEEEEEETTTTEEEEEETTSCGGGCEEEETTCT
T ss_pred CCCEEEEEECCCC-ccccEEEEEeccCCEEEEEeCCCCCCCCEEEcCCCC
Confidence 9999999988775 59999999887778889999732 2245544433
No 280
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=27.80 E-value=1.2e+02 Score=25.80 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=38.4
Q ss_pred CCccCceeEEEccCCCCeeeEEEEEeeCCCC---eEEEEccCCCc----cccccccceEEEEecchhh
Q 001263 239 KAFIGLQCKVYWPLDADWYSGFVVGYDSESN---RHHVKYVDGDE----EDLILSNERIKFYISQEEM 299 (1112)
Q Consensus 239 ~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~---~h~v~Yddg~~----e~l~l~~e~~~~~~~~~e~ 299 (1112)
..++|++|.|.= .|+.-|.|++.+||..-. ...+.|..+.. ..+.+.-..|.+...++++
T Consensus 10 ~~~~~~~V~V~L-~~g~~~~G~L~~~D~~mNlvL~d~~e~~~~~~~~~lg~v~iRG~~I~~i~~~d~~ 76 (77)
T 1i4k_A 10 NRSLKSPVIVRL-KGGREFRGTLDGYDIHMNLVLLDAEEIQNGEVVRKVGSVVIRGDTVVFVSPAPGG 76 (77)
T ss_dssp HTTTTSEEEEEE-TTSCEEEEEEEEECTTCCEEEEEEEEEETTEEEEEEEEEEECGGGEEEEEECC--
T ss_pred HHhCCCEEEEEE-cCCCEEEEEEEEEcCCCCeEEeeEEEEecCCcEeECCEEEECCCEEEEEEeCCCC
Confidence 357899998864 457889999999998877 45555554421 1233455666665555544
No 281
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.70 E-value=94 Score=26.24 Aligned_cols=57 Identities=14% Similarity=0.046 Sum_probs=43.0
Q ss_pred cCCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCcccccc
Q 001263 330 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 398 (1112)
Q Consensus 330 ~~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~f~~ 398 (1112)
...+|++|+-|+|+-+-=-..|+.|..... ......|+|+ |+.-.|+.-++|.++..
T Consensus 6 ~~~~f~eGqdVLarWsDGlfYlGtV~kV~~-----------~~~~ClV~Fe-D~s~~wv~~kdi~~~~~ 62 (68)
T 2e5p_A 6 SGPRLWEGQDVLARWTDGLLYLGTIKKVDS-----------AREVCLVQFE-DDSQFLVLWKDISPAAL 62 (68)
T ss_dssp CCCCCCTTCEEEEECTTSSEEEEEEEEEET-----------TTTEEEEEET-TTEEEEEETTTEECCCS
T ss_pred CCcccccCCEEEEEecCCcEEEeEEEEEec-----------CCcEEEEEEc-cCCeeeeeeeccccccc
Confidence 346799999999998887778899865321 1234678876 66788999999998753
No 282
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=27.64 E-value=12 Score=30.42 Aligned_cols=49 Identities=16% Similarity=0.390 Sum_probs=30.1
Q ss_pred cCccccccCCcccC--CCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 648 LDKCSVCHMDEEYQ--NNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 648 ~~~C~VC~~~~~~~--~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
+..|.||...-... ....+..-.|+-.||..|...-... ...|+.|...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~ 53 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKK 53 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH---CSBCTTTCCB
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc---CCCCCCCCcc
Confidence 46899998864321 2234455689999999998521100 2257777653
No 283
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=27.58 E-value=33 Score=39.15 Aligned_cols=35 Identities=26% Similarity=0.560 Sum_probs=27.2
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
....|.+|...-..-...-..|..|+..||..|..
T Consensus 356 ~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~ 390 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLG 390 (406)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGG
T ss_pred CCCCCccccchhceeCCCCCCCCCCcCccchhhhh
Confidence 34689999875432235678899999999999987
No 284
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=27.20 E-value=13 Score=34.85 Aligned_cols=83 Identities=16% Similarity=0.268 Sum_probs=50.7
Q ss_pred CcCccccccCCcccC--CCeeEEccCCCccccccccCCcCCCCCCceecccccCCCC----------CCCCCcccCCCCC
Q 001263 647 DLDKCSVCHMDEEYQ--NNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGAP----------EPPPPCCLCPVVG 714 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~--~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~~~----------~~~~~C~LC~~~g 714 (1112)
+...|.||...-... +...+.--.|+-.||..|...-.. . .-.|+.|..... .....|.+|...-
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~-~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~ 82 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--N-ANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGY 82 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHT--T-CSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBH
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHH--h-CCCCCCCCCcCccccccccccCCCCCCCCCCCCcc
Confidence 457899998764321 122334458999999999852111 1 237999986432 2346788886432
Q ss_pred -------CCceecCCCceeeeeccc
Q 001263 715 -------GAMKPTTDGRWAHLACAI 732 (1112)
Q Consensus 715 -------GalK~t~~g~WvHv~Cal 732 (1112)
.....+..|...|..|..
T Consensus 83 ~~~~~~~~~~~~~~CgH~fc~~Ci~ 107 (133)
T 4ap4_A 83 SEIVQNGRLIVSTECGHVFCSQCLR 107 (133)
T ss_dssp HHHHHTTCCEEEETTSBEEEHHHHH
T ss_pred ccccccCcceEeCCCCChhhHHHHH
Confidence 122455678778888864
No 285
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=27.14 E-value=70 Score=27.02 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=38.6
Q ss_pred CCCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCC-E-EEeeCCC
Q 001263 331 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD-F-ARINVKQ 392 (1112)
Q Consensus 331 ~~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~-~-awv~~~~ 392 (1112)
...|++|.-+=|.-..-||+||.|...+. ..+.+.|.|-|... + -|+..++
T Consensus 10 ~~~F~vGmkLEa~d~~~p~~~AtV~~v~~-----------~~~~~~VhfdGw~~~~D~W~~~dS 62 (69)
T 3sd4_A 10 GISFEVGAQLEARDRLKNWYPAHIEDIDY-----------EEGKVLIHFKRWNHRYDEWFCWDS 62 (69)
T ss_dssp TCCCSTTCEEEEECTTSCEEEEEEEEEET-----------TTTEEEEEETTSCGGGCEEEETTC
T ss_pred CCCcCCCCEEEEEECCCCccccEEEEEec-----------cCCEEEEEeCCCCCCCCEEEcCCC
Confidence 45799999999988888999999976311 13458999999655 2 6887664
No 286
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=27.05 E-value=1.2e+02 Score=26.34 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=40.6
Q ss_pred CCCCCCcEEEEeccCcCCCCceeecCccccCccccccCCCCCcEEEEEeCCCCEEEeeCCCccc
Q 001263 332 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVIS 395 (1112)
Q Consensus 332 ~~f~~GdlVWaK~~GyPwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~l~~ 395 (1112)
..|..|+=|+||-+-=-.-+|.|+.... ...+++|+|+ |+.-.|+.-++|.+
T Consensus 25 ~~f~eGeDVLarwsDGlfYLGTI~kV~~-----------~~e~ClV~F~-D~S~~W~~~kdi~~ 76 (79)
T 2m0o_A 25 PRLWEGQDVLARWTDGLLYLGTIKKVDS-----------AREVCLVQFE-DDSQFLVLWKDISP 76 (79)
T ss_dssp CCCCTTCEEEBCCTTSCCCEEEEEEEET-----------TTTEEEEEET-TSCEEEEETTTBCC
T ss_pred ceeccCCEEEEEecCCCEEeEEEEEecc-----------CCCEEEEEEc-CCCeEEEEeecccc
Confidence 4799999999998888888999975321 1244778876 66889999999875
No 287
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=26.64 E-value=56 Score=39.21 Aligned_cols=44 Identities=30% Similarity=0.467 Sum_probs=36.8
Q ss_pred ccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEcc-CCCccccccc
Q 001263 241 FIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYV-DGDEEDLILS 286 (1112)
Q Consensus 241 ~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yd-dg~~e~l~l~ 286 (1112)
-+|.-|-+.|. |+.||-|.|+..+. .+.-.|.|- -|..|.+.++
T Consensus 413 ~~G~~c~a~~~-d~~wyRa~I~~v~~-~~~~~V~fvDyGn~e~v~~~ 457 (570)
T 3bdl_A 413 RRGEFCIAKFV-DGEWYRARVEKVES-PAKIHVFYIDYGNREVLPST 457 (570)
T ss_dssp CTTCEEEEECT-TSCEEEEEEEEEEE-TTEEEEEETTTCCEEEECGG
T ss_pred CcCCEEEEEEC-CCCEEEEEEEEEcC-CCeEEEEEEeCCCeEEEEHH
Confidence 48999999999 99999999999997 455666666 4999988765
No 288
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=26.04 E-value=24 Score=29.32 Aligned_cols=51 Identities=18% Similarity=0.380 Sum_probs=31.8
Q ss_pred cCcCccccccCCccc--CCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEY--QNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~--~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
.++..|.||...-.. .+...+..-.|+-.||..|...-... .-.|+.|+..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~ 60 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKK 60 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH---CSBCTTTCCB
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc---CCCCCCCCCc
Confidence 345789999976432 12344556789999999998521000 1257777654
No 289
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=25.90 E-value=14 Score=35.00 Aligned_cols=17 Identities=29% Similarity=0.739 Sum_probs=15.2
Q ss_pred eeeecCCCCCCccccccch
Q 001263 772 ACIQCSNTTCRVAYHPLCA 790 (1112)
Q Consensus 772 a~iqC~~~~C~~~FH~~CA 790 (1112)
.||+|. .|..|||..|-
T Consensus 1 ~mi~c~--~c~~w~H~~c~ 17 (140)
T 2ku7_A 1 SMMQCG--KCDRWVHSKCE 17 (140)
T ss_dssp CCCCCS--CCSSCHHHHHC
T ss_pred Cccccc--cCCCccCCccc
Confidence 479999 89999999995
No 290
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.54 E-value=68 Score=25.29 Aligned_cols=27 Identities=26% Similarity=0.666 Sum_probs=21.3
Q ss_pred CCCCceecccccCCCCCCCCCcccCCCC
Q 001263 686 VNGVLWLCNLCRPGAPEPPPPCCLCPVV 713 (1112)
Q Consensus 686 ~~~~~W~C~~C~~~~~~~~~~C~LC~~~ 713 (1112)
++| .|-|..|..........|+-|...
T Consensus 8 ~~g-sW~C~~C~v~N~a~~~kC~aC~~p 34 (47)
T 2ebr_A 8 PEG-SWDCELCLVQNKADSTKCLACESA 34 (47)
T ss_dssp CCS-SCCCSSSCCCCCSSCSBCSSSCCB
T ss_pred CCC-eeECCeeecCCcCCcceecCcCCC
Confidence 344 899999998766677899999743
No 291
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.51 E-value=29 Score=28.18 Aligned_cols=31 Identities=13% Similarity=0.281 Sum_probs=22.1
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 681 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG 681 (1112)
.++..|.||...-. ++.+. .|+-.||..|..
T Consensus 18 ~~~~~C~IC~~~~~---~p~~~--~CgH~fC~~Ci~ 48 (63)
T 2ysj_A 18 QEEVICPICLDILQ---KPVTI--DCGHNFCLKCIT 48 (63)
T ss_dssp CCCCBCTTTCSBCS---SCEEC--TTSSEECHHHHH
T ss_pred ccCCCCCcCCchhC---CeEEe--CCCCcchHHHHH
Confidence 34579999987543 34443 799888888875
No 292
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=23.50 E-value=41 Score=40.44 Aligned_cols=36 Identities=25% Similarity=0.587 Sum_probs=27.2
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 682 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~ 682 (1112)
....|.+|...--.-...-+.|..|+..||..|.+.
T Consensus 528 ~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 528 ETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp SCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred CCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 346999998753222345689999999999999984
No 293
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=23.39 E-value=31 Score=25.01 Aligned_cols=26 Identities=23% Similarity=0.520 Sum_probs=20.5
Q ss_pred CCceecccccCCCCCCCCCcccCCCC
Q 001263 688 GVLWLCNLCRPGAPEPPPPCCLCPVV 713 (1112)
Q Consensus 688 ~~~W~C~~C~~~~~~~~~~C~LC~~~ 713 (1112)
+..|-|..|.+........|..|...
T Consensus 6 ~~~W~C~~CT~~N~~~~~~Ce~C~~~ 31 (34)
T 3a9j_C 6 GAQWNCTACTFLNHPALIRCEQCEMP 31 (34)
T ss_dssp CCCEECTTTCCEECTTCSBCTTTCCB
T ss_pred CCcCCCCCCccccCCCCCeeCCCCCc
Confidence 34899999998776667789999643
No 294
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.39 E-value=55 Score=27.35 Aligned_cols=48 Identities=25% Similarity=0.495 Sum_probs=29.0
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
++..|.||........ .+... .|+-.||..|...-... .-.|+.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~-~~~~~-~C~H~f~~~Ci~~~~~~---~~~CP~Cr~~ 61 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRD-ELGIC-PCKHAFHRKCLIKWLEV---RKVCPLCNMP 61 (74)
T ss_dssp CSCBCSSSCCBCCSSS-CEEEE-TTTEEEEHHHHHHHHHH---CSBCTTTCCB
T ss_pred CCCCCcCCCcccCCCC-cEEEc-CCCCEecHHHHHHHHHc---CCcCCCcCcc
Confidence 4568999998643322 33333 59999999998521100 1257777653
No 295
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=29.07 E-value=17 Score=33.94 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=39.1
Q ss_pred CCCCCCCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEEccCCCcccccc
Q 001263 234 DGVDPKAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 285 (1112)
Q Consensus 234 ~~~~~~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~Yddg~~e~l~l 285 (1112)
..+.+.--||..|.+--|+ ..|-+|+|..--- ...++|++||||+..|..
T Consensus 51 ~~ikG~l~vG~~ve~~~~~-~~~~~~~I~~i~D-~S~YtVVFdDGD~ktLrR 100 (118)
T 2lcd_A 51 DQVKGPLRVGAIVETRTSD-GSFQEAIISKLTD-ASWYTVVFDDGDERTLRR 100 (118)
Confidence 3444555699999999984 6999999987653 346789999999998874
No 296
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=23.23 E-value=32 Score=33.06 Aligned_cols=30 Identities=27% Similarity=0.538 Sum_probs=25.7
Q ss_pred ccceeecCcCceeeecCCCCCCccccccchhhc
Q 001263 761 LLCSICGVSYGACIQCSNTTCRVAYHPLCARAA 793 (1112)
Q Consensus 761 ~~C~iC~~~~Ga~iqC~~~~C~~~FH~~CA~~a 793 (1112)
..|.+|+. +|..+-|. .|..+||..|-...
T Consensus 58 ~~C~vC~d-GG~LlcCd--~Cpr~Fc~~Cl~~~ 87 (129)
T 3ql9_A 58 EQCRWCAE-GGNLICCD--FCHNAFCKKCILRN 87 (129)
T ss_dssp SSCTTTCC-CSEEEECS--SSSCEEEHHHHHHH
T ss_pred CcCeecCC-CCeeEecC--CCchhhhHHHhCCC
Confidence 47999998 68888786 99999999999764
No 297
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=23.22 E-value=39 Score=35.87 Aligned_cols=55 Identities=22% Similarity=0.459 Sum_probs=0.0
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCCCCCCCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGAPEPPP 705 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~~~~~~~ 705 (1112)
+....|.+|..--..+ +.|..|+..+|..|+..-....+ .=.|+.|...-+...+
T Consensus 178 ~~i~~C~iC~~iv~~g----~~C~~C~~~~H~~C~~~~~~~~~-~~~CP~C~~~W~~~~~ 232 (238)
T 3nw0_A 178 DAVKICNICHSLLIQG----QSCETCGIRMHLPCVAKYFQSNA-EPRCPHCNDYWPHEIP 232 (238)
T ss_dssp TTCCBCTTTCSBCSSC----EECSSSCCEECHHHHHHHTTTCS-SCBCTTTCCBCCSCCC
T ss_pred CCCCcCcchhhHHhCC----cccCccChHHHHHHHHHHHHhCC-CCCCCCCCCCCCCCCC
No 298
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=23.11 E-value=28 Score=25.43 Aligned_cols=25 Identities=20% Similarity=0.563 Sum_probs=19.2
Q ss_pred CCceecccccCCCCCCCCCcccCCC
Q 001263 688 GVLWLCNLCRPGAPEPPPPCCLCPV 712 (1112)
Q Consensus 688 ~~~W~C~~C~~~~~~~~~~C~LC~~ 712 (1112)
...|-|..|..........|..|..
T Consensus 5 ~g~W~C~~C~~~N~~~~~kC~aC~t 29 (33)
T 3gj3_B 5 SGTWDCDTCLVQNKPEAVKCVACET 29 (33)
T ss_dssp -CCEECTTTCCEECTTCSBCTTTCC
T ss_pred CCceeCCcccCCCccccCEEcccCC
Confidence 3489999999876666778999953
No 299
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.08 E-value=52 Score=26.58 Aligned_cols=27 Identities=22% Similarity=0.578 Sum_probs=21.6
Q ss_pred CCceecccccCCCCCCCCCcccCCCCC
Q 001263 688 GVLWLCNLCRPGAPEPPPPCCLCPVVG 714 (1112)
Q Consensus 688 ~~~W~C~~C~~~~~~~~~~C~LC~~~g 714 (1112)
...|-|..|.+........|..|....
T Consensus 9 ~~~W~C~~CT~~N~~~~~~C~~C~~pr 35 (53)
T 2d9g_A 9 EGYWDCSVCTFRNSAEAFKCMMCDVRK 35 (53)
T ss_dssp CCCEECSSSCCEECSSCSSCSSSCCCC
T ss_pred CCCcCCCCCccCCCCCCCccCCCCCcC
Confidence 348999999997776778999997543
No 300
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.01 E-value=33 Score=29.89 Aligned_cols=50 Identities=20% Similarity=0.442 Sum_probs=36.3
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
..-.|.-|...-.--.|.-..|..|...|-..|--... . ..|+|..|...
T Consensus 24 ~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~~--~-~~W~C~VC~k~ 73 (76)
T 2csz_A 24 SDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQES--N-GTWRCKVCSGP 73 (76)
T ss_dssp CCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEECS--T-TCEEEHHHHSS
T ss_pred CccchhhhCccccccccCCCcCcccChhhcccccccCC--C-CCEEEeeCchh
Confidence 34689999876544445556899999999999954322 2 38999999753
No 301
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=22.88 E-value=27 Score=25.15 Aligned_cols=24 Identities=29% Similarity=0.602 Sum_probs=17.1
Q ss_pred CceecccccCCCCCCCCCcccCCC
Q 001263 689 VLWLCNLCRPGAPEPPPPCCLCPV 712 (1112)
Q Consensus 689 ~~W~C~~C~~~~~~~~~~C~LC~~ 712 (1112)
++|.|..|....-.....|.-|..
T Consensus 4 gDW~C~~C~~~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKRLKCFRCGA 27 (32)
T ss_dssp SEEECTTTCCEEETTCCBCTTTCC
T ss_pred CCCCcCcCcCCcChhcceecCCCC
Confidence 389999998744334457888864
No 302
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.25 E-value=48 Score=28.06 Aligned_cols=49 Identities=20% Similarity=0.340 Sum_probs=28.9
Q ss_pred cCcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccCC
Q 001263 646 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 699 (1112)
Q Consensus 646 ~~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~~ 699 (1112)
.+...|.||...-.... .++ --.|+-.||..|...-. .. ...|+.|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~-~~~-~~~C~H~fc~~Ci~~~~--~~-~~~CP~Cr~~ 61 (78)
T 2ect_A 13 GSGLECPVCKEDYALGE-SVR-QLPCNHLFHDSCIVPWL--EQ-HDSCPVCRKS 61 (78)
T ss_dssp SSSCCCTTTTSCCCTTS-CEE-ECTTSCEEETTTTHHHH--TT-TCSCTTTCCC
T ss_pred CCCCCCeeCCccccCCC-CEE-EeCCCCeecHHHHHHHH--Hc-CCcCcCcCCc
Confidence 34578999987643322 222 22599999999975211 01 2357777654
No 303
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=22.13 E-value=1.5e+02 Score=26.03 Aligned_cols=61 Identities=20% Similarity=0.327 Sum_probs=40.6
Q ss_pred CCccCceeEEEccCCCCeeeEEEEEeeCCCC---eEEEEccCCCc----cccccccceEEEEecchhhh
Q 001263 239 KAFIGLQCKVYWPLDADWYSGFVVGYDSESN---RHHVKYVDGDE----EDLILSNERIKFYISQEEMD 300 (1112)
Q Consensus 239 ~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~---~h~v~Yddg~~----e~l~l~~e~~~~~~~~~e~~ 300 (1112)
..++|++|.|.== +..-|.|++.+||..-. ...+.|.+|+. ..+.+.-..|.+...+++.+
T Consensus 12 ~~~~~k~V~V~Lk-~g~~~~G~L~~~D~~mNlvL~d~~e~~~g~~~~~lg~v~IRG~nI~~i~~~d~~~ 79 (86)
T 3s6n_F 12 NGLTGKPVMVKLK-WGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEE 79 (86)
T ss_dssp HHHTTSEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEEEETTEEEEEESSEEECGGGEEEEEECC---
T ss_pred HHhCCCeEEEEEc-CCeEEEEEEEEEcCceEEEEeeEEEEcCCceeeEccEEEEeCCeEEEEEeCCccc
Confidence 3568999998654 46889999999998877 34555667643 23445667777766655543
No 304
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=22.06 E-value=29 Score=30.74 Aligned_cols=47 Identities=17% Similarity=0.323 Sum_probs=27.8
Q ss_pred CcCccccccCCcccCCCeeEEccCCCccccccccCCcCCCCCCceecccccC
Q 001263 647 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 698 (1112)
Q Consensus 647 ~~~~C~VC~~~~~~~~n~ll~Cd~C~~~VH~~CYG~~~~~~~~~W~C~~C~~ 698 (1112)
++..|.||......+ +..+. -.|+-.||..|...-.. . .-.|+.|+.
T Consensus 39 ~~~~C~IC~~~~~~~-~~~~~-l~C~H~Fh~~Ci~~wl~--~-~~~CP~Cr~ 85 (91)
T 2l0b_A 39 QEMCCPICCSEYVKG-DVATE-LPCHHYFHKPCVSIWLQ--K-SGTCPVCRC 85 (91)
T ss_dssp SCSEETTTTEECCTT-CEEEE-ETTTEEEEHHHHHHHHT--T-TCBCTTTCC
T ss_pred CCCCCcccChhhcCC-CcEEe-cCCCChHHHHHHHHHHH--c-CCcCcCcCc
Confidence 456899998654322 23333 34999999999752110 1 225777764
No 305
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.61 E-value=28 Score=30.52 Aligned_cols=17 Identities=35% Similarity=0.292 Sum_probs=14.8
Q ss_pred EEEEccCCCCCCeEEEe
Q 001263 1048 IIFAKRDIKQWEELTYD 1064 (1112)
Q Consensus 1048 ~i~A~RdI~~GEELT~d 1064 (1112)
.|+|.|||++||-||-+
T Consensus 8 slvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMD 24 (79)
T ss_dssp EEEESSCBCTTCBCCGG
T ss_pred EEEEeCccCCCCCcCHH
Confidence 47999999999999865
No 306
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=21.53 E-value=2.2e+02 Score=25.63 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=29.3
Q ss_pred CceeEEEccCCCCeeeEEEEEeeCCC-----CeEEEEccCCCc
Q 001263 243 GLQCKVYWPLDADWYSGFVVGYDSES-----NRHHVKYVDGDE 280 (1112)
Q Consensus 243 g~~~~v~wp~d~~~y~g~v~~~~~~~-----~~h~v~Yddg~~ 280 (1112)
|.++-|+|+ |..||+++|..-.... .+.-|.|..-..
T Consensus 18 ~e~vlc~~~-dg~~yeAeIl~ir~~~~~~~~~~YYVHY~g~Nk 59 (92)
T 2bud_A 18 DKIYFIRRE-DGTVHRGQVLQSRTTENAAAPDEYYVHYVGLNR 59 (92)
T ss_dssp TSCEEEECT-TSCEEEEEEEEEECTTTCSSCCEEEEECSSSCT
T ss_pred CCEEEEEeC-CCCEEEEEEEEEeeccCCCCCcEEEEEeCCccc
Confidence 789999997 7899999999866543 378888886543
No 307
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=20.98 E-value=52 Score=38.00 Aligned_cols=23 Identities=17% Similarity=0.411 Sum_probs=20.2
Q ss_pred cCeeEEecccCCCCCeEEEEcee
Q 001263 958 HGFGIFAKHPHRAGDMVIEYTGE 980 (1112)
Q Consensus 958 ~G~GlfA~~~I~~Ge~I~eY~Ge 980 (1112)
.|+||||+++|++|+.|+...-.
T Consensus 32 ~GrGl~A~~~I~~ge~ll~IP~~ 54 (440)
T 2h21_A 32 EGLGLVALKDISRNDVILQVPKR 54 (440)
T ss_dssp TEEEEEESSCBCTTEEEEEEEGG
T ss_pred CCCEEEEcccCCCCCEEEEeChh
Confidence 69999999999999999875544
No 308
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=20.53 E-value=82 Score=28.08 Aligned_cols=35 Identities=20% Similarity=0.251 Sum_probs=28.5
Q ss_pred CCccCceeEEEccCCCCeeeEEEEEeeCCCCeEEEE
Q 001263 239 KAFIGLQCKVYWPLDADWYSGFVVGYDSESNRHHVK 274 (1112)
Q Consensus 239 ~~~vg~~~~v~wp~d~~~y~g~v~~~~~~~~~h~v~ 274 (1112)
..+||+.|+|-= .|+..|.|.|.+|||.+..=.+.
T Consensus 13 ~~li~KeV~V~l-~dg~~y~G~l~tvDp~s~sIvL~ 47 (86)
T 1y96_A 13 QDYIYKEVRVTA-SEKNEYKGWVLTTDPVSANIVLV 47 (86)
T ss_dssp HHTTTCEEEEEE-TTTEEEEEEEEEECTTTCCEEEE
T ss_pred HhhcCCEEEEEE-cCCCEEEEEEEEECCCceEEEEe
Confidence 467999999985 56788999999999888755444
Done!