Your job contains 1 sequence.
>001266
MSTWQIFSDADNNFKWQVSGRILQPEPNGSPIQPHSSSFRLPSMSDLLLEGHSKLRENGN
EGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSL
FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFE
SDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDA
LQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRLGTAGTKT
ASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPSIKKPIRST
HGHKAIMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQTCEKKRLLRSSISP
FKRPRISKFSTPLRTNLSSPNGLSTLSSEQSGCEKKVFSRYPYQIPRMCVKEYFGMPPSA
QGMLDHLQDQVRQMKSHNADKYMFHDASGLNCIGAEALFNMLAQSGASTQYASKLWVSNH
YKWIVWKLACYERCYLAKSAGKFLTVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPS
SMMVLCISAIHMNCVPKIETHPEAQNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAG
KLFVGQKLRIWGAILCGWVGPVSPLEASGSISLQLNINGTYRAHWADRLGFCKGFGAPLA
FRCIKSNGGPVPRTLVGVTRIYPVLYKERLSDGRSIVRSERMECKVMQLYQHRQSMVVEG
IVSEFQRGNKDSHILNDSNSEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEAT
RQSNMERSIEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQ
CELVEGQAYAILGLIPMNSDSNTLYLQARGSTTKWQPLSPLATEHFKPFFSPRRSVLISN
LGEVPLSSEFDIAAFVVHVGDVYEDSQQKKQWVFVTDGSMLELQLEDLSKSLLAISISSP
YIDDDSFSPINYNLVGSTVGFCNLIKRPKDHLNHIWVAEATENSSYFLSFDFPTCSHLRS
AAASAQSWAKISSLIIDKLKENVLFIIGDRKC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001266
(1112 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2149800 - symbol:BRCA2B "BRCA2-like B" species... 2616 3.6e-295 2
TAIR|locus:2126841 - symbol:BRCA2(IV) "BREAST CANCER 2 li... 2204 2.0e-252 2
MGI|MGI:109337 - symbol:Brca2 "breast cancer 2" species:1... 542 2.3e-49 6
UNIPROTKB|P51587 - symbol:BRCA2 "Breast cancer type 2 sus... 538 1.2e-48 3
UNIPROTKB|F1Q0X3 - symbol:BRCA2 "Uncharacterized protein"... 514 7.2e-48 3
RGD|2219 - symbol:Brca2 "breast cancer 2, early onset" sp... 516 3.6e-47 6
UNIPROTKB|Q864S8 - symbol:BRCA2 "Breast cancer type 2 sus... 488 5.3e-46 3
UNIPROTKB|E1C2I8 - symbol:BRCA2 "Uncharacterized protein"... 489 2.6e-45 2
UNIPROTKB|F1N924 - symbol:BRCA2 "Uncharacterized protein"... 489 3.1e-45 2
UNIPROTKB|F1P3B2 - symbol:BRCA2 "Uncharacterized protein"... 489 3.1e-45 2
UNIPROTKB|Q66MH4 - symbol:Brca2 "Breast cancer susceptibi... 516 4.2e-45 5
UNIPROTKB|E1B8X8 - symbol:E1B8X8 "Uncharacterized protein... 507 9.5e-45 3
ZFIN|ZDB-GENE-060510-3 - symbol:brca2 "breast cancer 2, e... 435 1.6e-42 4
UNIPROTKB|I3LFN0 - symbol:I3LFN0 "Uncharacterized protein... 446 6.9e-38 2
DICTYBASE|DDB_G0293414 - symbol:DDB_G0293414 "BRCA2 repea... 235 2.4e-33 4
>TAIR|locus:2149800 [details] [associations]
symbol:BRCA2B "BRCA2-like B" species:3702 "Arabidopsis
thaliana" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;IBA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007090 "regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR002093
InterPro:IPR015187 InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103
Pfam:PF09169 PROSITE:PS50138 GO:GO:0005739 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0007090
InterPro:IPR015525 PANTHER:PTHR11289 PIRSF:PIRSF002397
SUPFAM:SSF81872 KO:K08775 EMBL:AJ488305 IPI:IPI00542778
RefSeq:NP_195783.3 UniGene:At.33531 HSSP:O35923 SMR:Q7Y1C4
IntAct:Q7Y1C4 STRING:Q7Y1C4 EnsemblPlants:AT5G01630.1 GeneID:831710
KEGG:ath:AT5G01630 TAIR:At5g01630 HOGENOM:HOG000083050
InParanoid:Q7Y1C4 OMA:IWNPTEK ProtClustDB:CLSN2681020
Genevestigator:Q7Y1C4 Uniprot:Q7Y1C4
Length = 1155
Score = 2616 (925.9 bits), Expect = 3.6e-295, Sum P(2) = 3.6e-295
Identities = 566/1065 (53%), Positives = 726/1065 (68%)
Query: 64 DNVST-PMFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSLFQ 122
D T PMF+T GK VPLK+SSI K LS+LG+D I + PRE+GFG NSLFQ
Sbjct: 115 DTAETMPMFRTALGKTVPLKESSIAKPLSILGSDM---IIDSDNVLPRESGFGVPNSLFQ 171
Query: 123 TGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVK-EGVKGNVFES 181
T S K VN+SSAGL RAK+LLGLEE +D G H +S+ + G+K + E
Sbjct: 172 TASNKKVNVSSAGLARAKALLGLEE--DD--LNGFNHVNQSSSSLQQHGWSGLKTHE-EF 226
Query: 182 DTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDAL 241
D +V++ S G +++N +S ++E LN + K P KFQTAGG+SLSVS++AL
Sbjct: 227 DATVVKHHS----G-TPGQYENYVSGK--RSEILNPSLKVPPTKFQTAGGKSLSVSAEAL 279
Query: 242 QYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFF-RLGTAGTKT 300
+ ARNLLGDPELG+FF +V T K R D + N V T + K
Sbjct: 280 KRARNLLGDPELGSFFDDVAGGDQFFTPQKDERLSDIAINN-GSVNTGYIAHEEKTSNKH 338
Query: 301 ASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFD-AVDHDGVSGLNGKIPSIKKPIRS 359
S +F SPL S RS +N EN+ + NLI+KFD AVD + LN I KP +
Sbjct: 339 TSNSFVSPLHSSSKQFRS-VNLENLASGGNLIKKFDTAVDETNCA-LN-----ISKP--A 389
Query: 360 THG----HKAIMDNSVEDDIGS----KINSLGRSSGKPLADITNSTSTACANIKQ-TCEK 410
THG D +V + G+ + LGR + +PL DITN TA AN KQ + +K
Sbjct: 390 THGLSNNRPLASDMAVNNSKGNGFIPRARQLGRPADQPLVDITNRRDTAYANNKQDSTQK 449
Query: 411 KRLLRS-SISPFKRPRISKFSTPLRTNLS-SPNGLSTLSSEQSGCEKKVFSRYPYQIPRM 468
KRL ++ S+SPFKRPRIS F TPL+ N + +GLS +S + +K + +RYP + PR+
Sbjct: 450 KRLGKTVSVSPFKRPRISSFKTPLKKNAQQASSGLSVVSCDTLTSKKVLSTRYPEKSPRV 509
Query: 469 CVKEYFGMPPSAQGMLDHLQDQVRQMKSHNADKYMFHDASGLNCIGAEALFNMLAQSGAS 528
+KE+FGM P+A +D++ D VR++KS NADKY+F D S N +GAE MLA+SGAS
Sbjct: 510 YIKEFFGMHPTATTRMDYVPDHVRRIKSSNADKYVFCDESSSNKVGAETFLQMLAESGAS 569
Query: 529 TQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFLTVFNVLEELKYRYEREVNNGHRSA 588
Q+AS+ WV+NHY+WIVWKLACY+ Y AK G FLT+ NVLEELKYRYEREVN+GH SA
Sbjct: 570 LQHASRKWVTNHYRWIVWKLACYDIYYPAKCRGNFLTITNVLEELKYRYEREVNHGHCSA 629
Query: 589 IKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEAQNGAENSYAAKLELTDGWYSVDAF 648
IKRIL GDA SSMMVLCISAI+ P+ + + + ++N K+ELTDGWYS++A
Sbjct: 630 IKRILSGDAPASSMMVLCISAIN----PRTDNGSQEAHCSDNCSNVKVELTDGWYSMNAA 685
Query: 649 LDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSPLEA--SGSISLQLNINGTYRAHWA 706
LDV+L+K L AGKLFVGQKLRI GA L GW P SPLEA S +I L LNINGTYRAHWA
Sbjct: 686 LDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTSPLEAVISSTICLLLNINGTYRAHWA 745
Query: 707 DRLGFCKGFGAPLAFRCIKSNGGPVPRTLVGVTRIYPVLYKERLSDGRSIVRSERMECKV 766
DRLGFCK G PLAF CIK NGGPVP+TL G+TRIYP+LYKERL + +SIVRSER+E ++
Sbjct: 746 DRLGFCKEIGVPLAFNCIKCNGGPVPKTLAGITRIYPILYKERLGEKKSIVRSERIESRI 805
Query: 767 MQLYQHRQSMVVEGIVSEFQRGNKDSHILNDSNSE-GAKLFKMLETVAEPEVIMAEMSPE 825
+QL+ R+S +VEGI+ E+QRG H ND++SE GAK+FK+LET AEPE++MAEMS E
Sbjct: 806 IQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSEEGAKVFKLLETAAEPELLMAEMSLE 865
Query: 826 QLTSFATYQAKLEATRQSNMERSIEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGSS 885
QLTSF TY+AK EA +Q ME+S+ KALE+AGL ER+VTPFMR+R+VGLT + +G+ +
Sbjct: 866 QLTSFTTYKAKFEAAKQMQMEKSVAKALEDAGLGERNVTPFMRIRLVGLTSLSNEGEHNP 925
Query: 886 REGIITIWNPAEKQQCELVEGQAYAILGLIPMNSDSNTLYLQARGSTTKWQPLSPLATEH 945
+EGI+TIW+P E+Q+ EL EG+ Y + GL+PMNSDS TLYL ARGS+++WQPLSP +E+
Sbjct: 926 KEGIVTIWDPTERQRTELTEGKIYIMKGLVPMNSDSETLYLHARGSSSRWQPLSPKDSEN 985
Query: 946 FKPFFSPRRSVLISNLGEVPLSSEFDIAAFVVHVGDVYEDSQQKKQWVFVTDGSMLELQL 1005
F+PFF+PR+ + +SNLGE+PLSSEFDIAA+VV+VGD Y D QKKQWVFVTDGS
Sbjct: 986 FQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVGDAYTDVLQKKQWVFVTDGSTQHSG- 1044
Query: 1006 EDXXXXXXXXXXXXXXXXXXXXXXXNYNLVGSTVGFCNLIKRPKDHLNHIWVAEATENSS 1065
+ ++NLVGS VGFCNLIKR KD N +WVAE TENS
Sbjct: 1045 -EISNSLLAISFSTPFMDDSSVSHISHNLVGSVVGFCNLIKRAKDATNEMWVAETTENSV 1103
Query: 1066 YFLSFDFPTCSHLRSAAASAQSWAKI--SSLIIDKLKENVLFIIG 1108
YF++ + SHL++ +A Q+WAK+ S +I +L++ VLFIIG
Sbjct: 1104 YFINAEAAYSSHLKTRSAHIQTWAKLYSSKSVIHELRQRVLFIIG 1148
Score = 242 (90.2 bits), Expect = 3.6e-295, Sum P(2) = 3.6e-295
Identities = 58/148 (39%), Positives = 87/148 (58%)
Query: 1 MSTWQIFSDADNN-FKWQVSGRILQPEPNGSPIQPHSSSFRLPSMSDLLLEGHSKLRENG 59
MSTW +FSD+ + F+W+V+GRILQ + +P + S+ LPSM+DLLL+G SKL E
Sbjct: 1 MSTWHLFSDSSGDGFRWEVAGRILQSVSDSTPTKALESTAPLPSMADLLLQGCSKLIERE 60
Query: 60 NEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTD---NDCGISFAGEEHPRENGFGF 116
+ PMF+TG GK+V LK+SSI KA S+L + +D + R+
Sbjct: 61 ESMPGEI--PMFRTGLGKSVVLKESSIAKAKSILAENVAYSDLQNTNCSIPQTRQVDTAE 118
Query: 117 SNSLFQTGSGKTVNISSAGLVRAKSLLG 144
+ +F+T GKTV + + + + S+LG
Sbjct: 119 TMPMFRTALGKTVPLKESSIAKPLSILG 146
>TAIR|locus:2126841 [details] [associations]
symbol:BRCA2(IV) "BREAST CANCER 2 like 2A" species:3702
"Arabidopsis thaliana" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA;IBA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA;RCA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0048314 "embryo sac morphogenesis" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0031347 "regulation of defense response" evidence=IGI]
[GO:0007126 "meiosis" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] InterPro:IPR002093
InterPro:IPR015187 InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103
Pfam:PF09169 PROSITE:PS50138 GO:GO:0005634 EMBL:CP002687
GO:GO:0006355 GO:GO:0009793 GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0007090
InterPro:IPR015525 PANTHER:PTHR11289 PIRSF:PIRSF002397
SUPFAM:SSF81872 KO:K08775 GO:GO:0031347 GO:GO:0048314
IPI:IPI00938654 RefSeq:NP_001154192.1 UniGene:At.33529
ProteinModelPortal:F4JGU5 SMR:F4JGU5 EnsemblPlants:AT4G00020.2
GeneID:828230 KEGG:ath:AT4G00020 ArrayExpress:F4JGU5 Uniprot:F4JGU5
Length = 1187
Score = 2204 (780.9 bits), Expect = 2.0e-252, Sum P(2) = 2.0e-252
Identities = 475/953 (49%), Positives = 626/953 (65%)
Query: 148 GRNDWSFEGLQHTRMTSTPRFEVK-EGVKGNVFESDTSVLRPSSISKAGFAESRFKNKIS 206
G + G H +S+ + G+K + E D +V++ S G ++++ +S
Sbjct: 193 GLEEDDLNGFNHVNQSSSSSQQHGWSGLKTHE-EFDATVVKHHS----G-TPGQYEDYVS 246
Query: 207 SNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLD 266
++E LN + K P KFQTAGG+SLSVS++AL+ ARNLLGDPELG+FF +V
Sbjct: 247 GK--RSEVLNPSLKVPPTKFQTAGGKSLSVSAEALKRARNLLGDPELGSFFDDVAGGDQF 304
Query: 267 LTSFKHRRFDDSSSNKENDVFTSFFRLGTAGTKTASKNFTSPLRLFSNPVRSRINSENIN 326
T K R D + N + K +F SPL S S +N EN+
Sbjct: 305 FTPEKDERLSDIAINNGSANRGYIAHEEKTSNKHTPNSFVSPLWSSSKQFSS-VNLENLA 363
Query: 327 TSANLIEKFDAVDHDGVSGLNGKIPSIKKPIRSTHGHKAIMDNSVEDDIGSKINSLGRSS 386
+ NLI+KFDA + LN RS A+ ++ V I + GR +
Sbjct: 364 SGGNLIKKFDAAVDETDCALNATHGLSNN--RSLASDMAVNNSKVNGFI-PRGRQPGRPA 420
Query: 387 GKPLADITNSTSTACANIKQ-TCEKKRLLRS-SISPFKRPRISKFSTPLRTN-LSSPNGL 443
+PL DITN TA A KQ + +KKRL ++ S+SPFKRPRIS F TP + + L + +GL
Sbjct: 421 DQPLVDITNRRDTAYAYNKQDSTQKKRLGKTVSVSPFKRPRISSFKTPSKKHALQASSGL 480
Query: 444 STLSSEQSGCEKKVFSRYPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHNADKYM 503
S +S + +K + +RYP + PR+ +K++FGM P+A +D++ D VR++KS NADKY+
Sbjct: 481 SVVSCDTLTSKKVLSTRYPEKSPRVYIKDFFGMHPTATTRMDYVPDHVRRIKSSNADKYV 540
Query: 504 FHDASGLNCIGAEALFNMLAQSGASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKF 563
F D S N +GAE MLA+S + + + WIVWKLACY+ Y AK G F
Sbjct: 541 FCDESSSNKVGAETFLQMLAESEKVCDRSFEACM-----WIVWKLACYDIYYPAKCRGNF 595
Query: 564 LTVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPE 623
LT+ NVLEELKYRYEREVN+GH SAIKRIL GDA SSMMVLCISAI+ PK + +
Sbjct: 596 LTITNVLEELKYRYEREVNHGHCSAIKRILSGDAPASSMMVLCISAIN----PKTDNDSQ 651
Query: 624 AQNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVS 683
+ +++ K+ELTDGWYS++A LDV+L+K L AGKLFVGQKLRI GA L GW P S
Sbjct: 652 EAHCSDSCSNVKVELTDGWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTS 711
Query: 684 PLEA--SGSISLQLNINGTYRAHWADRLGFCKGFGAPLAFRCIKSNGGPVPRTLVGVTRI 741
PLEA S +I L LNINGTYRAHWADRLGFCK G PLA CIK NGGPVP+TL G+ RI
Sbjct: 712 PLEAVISSTICLLLNINGTYRAHWADRLGFCKEIGVPLALNCIKCNGGPVPKTLAGIKRI 771
Query: 742 YPVLYKERLSDGRSIVRSERMECKVMQLYQHRQSMVVEGIVSEFQRGNKDSHILNDSNSE 801
YP+LYKERL + +SIVRSER+E +++QL+ R+S +VEGI+ E+QRG H ND++SE
Sbjct: 772 YPILYKERLGEKKSIVRSERIESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSE 831
Query: 802 -GAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGLRE 860
GAK+FK+LET AEPE +MAEMSPEQL SF TY+AK EA +Q E+S+ + LE+AGL E
Sbjct: 832 EGAKIFKLLETAAEPEFLMAEMSPEQLRSFTTYKAKFEAAQQMRKEKSVAETLEDAGLGE 891
Query: 861 RDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQCELVEGQAYAILGLIPMNSD 920
R+VTPFMR+R+VGLT +Y+G+ + +EGI+TIW+P E+Q+ EL EG+ Y + GL+P+NSD
Sbjct: 892 RNVTPFMRIRLVGLTSLSYEGEHNPKEGIVTIWDPTERQRTELTEGKIYMMKGLVPINSD 951
Query: 921 SNTLYLQARGSTTKWQPLSPLATEHFKPFFSPRRSVLISNLGEVPLSSEFDIAAFVVHVG 980
S LYL ARGS+++WQPLSP +E+F+PFF+PR+ + +SNLGE+PLSSEFDIAA+VV+VG
Sbjct: 952 SEILYLHARGSSSRWQPLSPKDSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVG 1011
Query: 981 DVYEDSQQKKQWVFVTDGSMLELQLEDXXXXXXXXXXXXXXXXXXXXXXXNYNLVGSTVG 1040
+ Y D QKKQWVFVTDGS + ++NLVGS VG
Sbjct: 1012 NAYTDVLQKKQWVFVTDGSAQHSG--EISNSLLAISFSTSFMDDSSVSHISHNLVGSVVG 1069
Query: 1041 FCNLIKRPKDHLNHIWVAEATENSSYFLSFDFPTCSHLRSAAASAQSWAKISS 1093
FCNLIKR KD N IWVAEA ENS YF++ + SHL++++A Q+WAK+SS
Sbjct: 1070 FCNLIKRAKDVTNEIWVAEAAENSVYFINAEAAYSSHLKTSSAHIQTWAKLSS 1122
Score = 757 (271.5 bits), Expect = 1.3e-72, P = 1.3e-72
Identities = 198/481 (41%), Positives = 277/481 (57%)
Query: 64 DNVST-PMFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSLFQ 122
D T PMF+T SGK+VPLK+SSI KA+S+LG+D I + PRE+GFG SNSLFQ
Sbjct: 115 DTAETLPMFRTASGKSVPLKESSIAKAMSILGSDK---IIDSDNVLPRESGFGVSNSLFQ 171
Query: 123 TGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVK-EGVKGNVFES 181
T S K VN+SSAGL RAK+LLGLEE +D G H +S+ + G+K + E
Sbjct: 172 TASNKKVNVSSAGLARAKALLGLEE--DD--LNGFNHVNQSSSSSQQHGWSGLKTHE-EF 226
Query: 182 DTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDAL 241
D +V++ S G ++++ +S ++E LN + K P KFQTAGG+SLSVS++AL
Sbjct: 227 DATVVKHHS----G-TPGQYEDYVSGK--RSEVLNPSLKVPPTKFQTAGGKSLSVSAEAL 279
Query: 242 QYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRLGTAGTKTA 301
+ ARNLLGDPELG+FF +V T K R D + N + K
Sbjct: 280 KRARNLLGDPELGSFFDDVAGGDQFFTPEKDERLSDIAINNGSANRGYIAHEEKTSNKHT 339
Query: 302 SKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPSIKKPIRSTH 361
+F SPL S S +N EN+ + NLI+KFDA + LN RS
Sbjct: 340 PNSFVSPLWSSSKQFSS-VNLENLASGGNLIKKFDAAVDETDCALNATHGLSNN--RSLA 396
Query: 362 GHKAIMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQ-TCEKKRLLRS-SIS 419
A+ ++ V I + GR + +PL DITN TA A KQ + +KKRL ++ S+S
Sbjct: 397 SDMAVNNSKVNGFI-PRGRQPGRPADQPLVDITNRRDTAYAYNKQDSTQKKRLGKTVSVS 455
Query: 420 PFKRPRISKFSTPLRTN-LSSPNGLSTLSSEQSGCEKKVFSRYPYQIPRMCVKEYFGMPP 478
PFKRPRIS F TP + + L + +GLS +S + +K + +RYP + PR+ +K++FGM P
Sbjct: 456 PFKRPRISSFKTPSKKHALQASSGLSVVSCDTLTSKKVLSTRYPEKSPRVYIKDFFGMHP 515
Query: 479 SAQGMLDHLQDQVRQMKSHNADKYMFHDASGLNCIGAEALFNMLAQSG--ASTQYASKLW 536
+A +D++ D VR++KS NADKY+F D S N +GAE MLA+S + + +W
Sbjct: 516 TATTRMDYVPDHVRRIKSSNADKYVFCDESSSNKVGAETFLQMLAESEKVCDRSFEACMW 575
Query: 537 V 537
+
Sbjct: 576 I 576
Score = 250 (93.1 bits), Expect = 2.0e-252, Sum P(2) = 2.0e-252
Identities = 62/153 (40%), Positives = 92/153 (60%)
Query: 1 MSTWQIFSDADNN-FKWQVSGRILQPEPNGSPIQPHSSSFRLPSMSDLLLEGHSKL--RE 57
MSTWQ+F D+ + F+W+V+GRILQ + +P + S+ LPSM+DLLL+G SKL RE
Sbjct: 1 MSTWQLFPDSSGDGFRWEVAGRILQSVSDSTPTKALESTAPLPSMADLLLQGCSKLIARE 60
Query: 58 NGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLG---TDNDCGISFAGEEHPRENGF 114
G PMF+TG GK+V LK+SSI KA S+L T +D + R+
Sbjct: 61 EAMPG----EIPMFRTGLGKSVVLKESSIAKAKSILAEKVTYSDLRNTNCSIPQMRQVDT 116
Query: 115 GFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEE 147
+ +F+T SGK+V + + + +A S+LG ++
Sbjct: 117 AETLPMFRTASGKSVPLKESSIAKAMSILGSDK 149
Score = 63 (27.2 bits), Expect = 1.2e-232, Sum P(2) = 1.2e-232
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 45 SDLLLEGHSKL-RENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDND 98
SD +++ + L RE+G VS +F+T S K V + + + +A ++LG + D
Sbjct: 147 SDKIIDSDNVLPRESGF----GVSNSLFQTASNKKVNVSSAGLARAKALLGLEED 197
>MGI|MGI:109337 [details] [associations]
symbol:Brca2 "breast cancer 2" species:10090 "Mus musculus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO;IMP] [GO:0001556 "oocyte maturation"
evidence=IMP] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0002020 "protease binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=ISO;IBA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO;IMP] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0006978 "DNA damage response, signal transduction by p53 class
mediator resulting in transcription of p21 class mediator"
evidence=IMP] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=ISO;IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0007569 "cell aging" evidence=IMP] [GO:0008283
"cell proliferation" evidence=IMP] [GO:0008585 "female gonad
development" evidence=IMP] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IGI]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0010225 "response
to UV-C" evidence=IMP] [GO:0010332 "response to gamma radiation"
evidence=IMP] [GO:0010484 "H3 histone acetyltransferase activity"
evidence=ISO] [GO:0010485 "H4 histone acetyltransferase activity"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030141
"secretory granule" evidence=ISO] [GO:0030879 "mammary gland
development" evidence=ISO] [GO:0031619 "homologous chromosome
orientation involved in meiotic metaphase I plate congression"
evidence=ISO] [GO:0032465 "regulation of cytokinesis" evidence=IMP]
[GO:0033205 "cell cycle cytokinesis" evidence=ISO] [GO:0033593
"BRCA2-MAGE-D1 complex" evidence=ISO] [GO:0033600 "negative
regulation of mammary gland epithelial cell proliferation"
evidence=ISO] [GO:0035264 "multicellular organism growth"
evidence=ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IBA] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IGI;IMP]
[GO:0043009 "chordate embryonic development" evidence=IMP]
[GO:0043015 "gamma-tubulin binding" evidence=ISO;IBA] [GO:0043234
"protein complex" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0043967 "histone H4 acetylation"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=IMP] [GO:0048478 "replication fork
protection" evidence=IMP] [GO:0051276 "chromosome organization"
evidence=IMP] [GO:0051298 "centrosome duplication"
evidence=ISO;IBA] InterPro:IPR002093 InterPro:IPR015187
InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103 Pfam:PF09169
PROSITE:PS50138 MGI:MGI:109337 GO:GO:0005737 GO:GO:0005813
GO:GO:0005654 GO:GO:0007420 GO:GO:0042771 GO:GO:0051298
GO:GO:0008585 GO:GO:0045931 GO:GO:0007283 GO:GO:0042127
GO:GO:0010332 Reactome:REACT_120463 GO:GO:0003697 GO:GO:0000724
GO:GO:0030097 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0001556 GO:GO:0010165 GO:GO:0051276 Reactome:REACT_27235
GO:GO:0043015 GO:GO:0010225 GO:GO:0032465 GO:GO:0007569
GO:GO:0048478 GO:GO:0006978 CTD:675 HOVERGEN:HBG050731
GO:GO:0007090 InterPro:IPR015525 InterPro:IPR015188
InterPro:IPR015205 PANTHER:PTHR11289 Pfam:PF09104 Pfam:PF09121
PIRSF:PIRSF002397 SUPFAM:SSF81872 eggNOG:NOG331296
HOGENOM:HOG000139693 KO:K08775 OrthoDB:EOG4ZCT3K GO:GO:0001833
GO:GO:0007141 EMBL:U82270 EMBL:U65594 EMBL:U89652 EMBL:AC154885
EMBL:U72947 EMBL:U89503 IPI:IPI00314969 PIR:T30835 PIR:T30904
PIR:T42205 RefSeq:NP_001074470.1 RefSeq:NP_033895.2
UniGene:Mm.236256 PDB:1MIU PDB:1MJE PDBsum:1MIU PDBsum:1MJE
ProteinModelPortal:P97929 IntAct:P97929 MINT:MINT-205603
STRING:P97929 PhosphoSite:P97929 PRIDE:P97929
Ensembl:ENSMUST00000044620 GeneID:12190 KEGG:mmu:12190
UCSC:uc009aty.1 GeneTree:ENSGT00390000003602 InParanoid:P97929
OMA:LGFHTAS EvolutionaryTrace:P97929 NextBio:280585
CleanEx:MM_BRCA2 Genevestigator:P97929
GermOnline:ENSMUSG00000041147 Uniprot:P97929
Length = 3329
Score = 542 (195.9 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 155/471 (32%), Positives = 234/471 (49%)
Query: 514 GAEALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFLTVFNVLEE 572
G E + L + G + S +WV+NHY+WIVWKLA E + + A + L VL +
Sbjct: 2517 GKEEFYRALCDTPGVDPKLISSIWVANHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQ 2576
Query: 573 LKYRYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEAQNGAENSY 632
LKYRY+ E++N RSA+K+ILE D + +VLCIS I ET +G + +
Sbjct: 2577 LKYRYDVEIDNSRRSALKKILERDDTAAKTLVLCISDIISPSTKVSETSGGKTSGEDANK 2636
Query: 633 AAKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSPLEASGSIS 692
+ELTDGWY+V A LD L + +GKL VGQK+ GA L G +PLEA S+
Sbjct: 2637 VDTIELTDGWYAVRAQLDPPLMALVKSGKLTVGQKIITQGAELVGSPDACAPLEAPDSLR 2696
Query: 693 LQLNINGTYRAHWADRLGFCKGFGA-PLAFRCIKSNGGPVPRTLVGVTRIYPVLYKERLS 751
L+++ N T A W RLGF + PL + S+GG V + V R+YP+ + E+
Sbjct: 2697 LKISANSTRPARWHSRLGFFRDPRPFPLPLSSLFSDGGNVGCVDIIVQRVYPLQWVEKTV 2756
Query: 752 DGRSIVRSERMECKVMQLYQHRQSMVVEGIVS----EFQRGNKD-------SHILNDSN- 799
G I RSER E K + Q +E + + EF+ +D S L
Sbjct: 2757 SGLYIFRSEREEEKEALRFAEAQQKKLEALFTKVHTEFKDHEEDTTQRCVLSRTLTRQQV 2816
Query: 800 ---SEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENA 856
+GA+L+ ++ ++P+ + A S EQL + Y+ L +Q+ ++ KALE+A
Sbjct: 2817 HALQDGAELYAAVQYASDPDHLEACFSEEQLRALNNYRQMLNDKKQARIQSEFRKALESA 2876
Query: 857 GLRERDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQCELVEGQAYAILGLIP 916
E V + +T +Y+ K S +++IW P+ L EG+ Y I L
Sbjct: 2877 EKEEGLSRDVTTVWKLRVT--SYKKKEKS--ALLSIWRPSSDLSSLLTEGKRYRIYHLAV 2932
Query: 917 MNSDSN----TLYLQARGSTTKWQPLSPLATEHFKPFFSPRRSVLISNLGE 963
S S ++ L A T++Q L P+++E + PR S+ S L +
Sbjct: 2933 SKSKSKFERPSIQLTAT-KRTQYQQL-PVSSETLLQVYQPRESLHFSRLSD 2981
Score = 67 (28.6 bits), Expect = 8.4e-48, Sum P(5) = 8.4e-48
Identities = 29/139 (20%), Positives = 59/139 (42%)
Query: 118 NSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGN 177
N FQT SGK +S L ++ ++ E D + T ++ + ++ G+ N
Sbjct: 1398 NISFQTASGKNTRVSKESLNKSVNIFNRE---TD------ELTVISDSLNSKILHGI--N 1446
Query: 178 VFESDTSVLRPSSISKAGFAESRFK----NKISSNMMQTEGLNSAPKPPQIKFQTAGGRS 233
+ TS + + K F E F +++ + + S +P + F TA G+
Sbjct: 1447 KDKMHTSCHKKAISIKKVF-EDHFPIVTVSQLPAQQHPEYEIESTKEPTLLSFHTASGKK 1505
Query: 234 LSVSSDALQYARNLLGDPE 252
+ + ++L +NL + +
Sbjct: 1506 VKIMQESLDKVKNLFDETQ 1524
Score = 64 (27.6 bits), Expect = 7.5e-48, Sum P(4) = 7.5e-48
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 70 MFKTGSGKAVPLKQSSIEKALSVLGT-DNDCG-----ISFAGEEHPREN 112
+F T SGKA+ + +S+EKA V D D +S G E P +
Sbjct: 1930 IFSTASGKAIQVSDASLEKARQVFSEMDGDAKQLSSMVSLEGNEKPHHS 1978
Score = 62 (26.9 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 178 VF-ESDTSVLRPSS-ISKAGFAESRFKNKISSNMMQ-TEGLNSAPKP-P-QIK------F 226
VF E D + SS +S G + K ++++ T+G+ S PKP P + F
Sbjct: 1952 VFSEMDGDAKQLSSMVSLEGNEKPHHSVKRENSVVHSTQGVLSLPKPLPGNVNSSVFSGF 2011
Query: 227 QTAGGRSLSVSSDALQYARNLLGDPEL 253
TAGG+ ++VS AL + +L + +L
Sbjct: 2012 STAGGKLVTVSESALHKVKGMLEEFDL 2038
Score = 60 (26.2 bits), Expect = 9.6e-48, Sum P(4) = 9.6e-48
Identities = 51/241 (21%), Positives = 87/241 (36%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSN-KEN 284
F +A G LSVS++AL+ A L D E + V +S H S K+
Sbjct: 1199 FCSALGTKLSVSNEALRKAMKLFSDIE-NSEEPSAKVGPRGFSSSAHHDSVASVFKIKKQ 1257
Query: 285 DVFTSFFRLGTAGTKTASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVS 344
+ SF + T N +F N E + + + + + +
Sbjct: 1258 NTEKSFDEKSSKCQVTLQNNIEMTTCIFVGR-----NPEKYIKNTKHEDSYTSSQRNNLE 1312
Query: 345 GLNGKIPSIKKPIRSTHGHKAIMDNSVEDDIGSKI----NSLGRSSGKPLAD-ITNSTST 399
+G + S P+ + HK D+ + D GSK R + + I++ T
Sbjct: 1313 NSDGSMSSTSGPV---YIHKG--DSDLPADQGSKCPESCTQYAREENTQIKENISDLTCL 1367
Query: 400 ACANIKQTCEKKRLLRSSISPFKRPRISKFSTPLRTNLSSPNGLSTLSSEQSGCEKKVFS 459
++TC K + S I +F+ +T S N + +S E +F+
Sbjct: 1368 EIMKAEETCMKSSDKKQLPSDKMEQNIKEFNISFQT-ASGKN--TRVSKESLNKSVNIFN 1424
Query: 460 R 460
R
Sbjct: 1425 R 1425
Score = 57 (25.1 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 1 MSTWQIFSDADNNFKWQVSGRILQPEPNGSPIQ 33
M++ ++F D+ NNF +QV+ + +P+ GS ++
Sbjct: 853 MNSEELFPDSGNNFAFQVTNKCNKPDL-GSSVE 884
Score = 56 (24.8 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 120 LFQTGSGKTVNISSAGLVRAKSLLGLEEG 148
+F T SGK + +S A L +A+ + +G
Sbjct: 1930 IFSTASGKAIQVSDASLEKARQVFSEMDG 1958
Score = 53 (23.7 bits), Expect = 2.3e-46, Sum P(5) = 2.3e-46
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 174 VKGNVFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRS 233
+K N+ SD + L I KA E+ K+ + ++ + K I FQTA G++
Sbjct: 1357 IKENI--SDLTCLE---IMKA--EETCMKSS-DKKQLPSDKMEQNIKEFNISFQTASGKN 1408
Query: 234 LSVSSDALQYARNL 247
VS ++L + N+
Sbjct: 1409 TRVSKESLNKSVNI 1422
Score = 51 (23.0 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 54 KLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDND 98
K+ +N E N+S F+T SGK + + S+ K++++ + D
Sbjct: 1389 KMEQNIKEF--NIS---FQTASGKNTRVSKESLNKSVNIFNRETD 1428
Score = 51 (23.0 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 49/245 (20%), Positives = 90/245 (36%)
Query: 215 LNSAPKPPQIKFQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRR 274
+ S +P + F TA G+ + + ++L +NL + + + + SF
Sbjct: 1487 IESTKEPTLLSFHTASGKKVKIMQESLDKVKNLFDETQ---YVRKT-------ASFSQGS 1536
Query: 275 FDDSSSNKENDVFTSFFRLGTAGTKTAS-KNFTSPLR--LFSNPVRSRINSENINTSANL 331
S KE + ++ ++ +K +NF S L +EN+ TS
Sbjct: 1537 KPLKDSKKE--LTLAYEKIEVTASKCEEMQNFVSKETEMLPQQNYHMYRQTENLKTSNGT 1594
Query: 332 IEKFDAVDHDGVSGLNGKIPSIKK---PIRSTHGHKAIMDNSVEDDIGSKINSLGRSSGK 388
K + V N +I I + P+ ++S + + S GR +
Sbjct: 1595 SSKVQENIENNVEK-NPRICCICQSSYPVTEDSALAYYTEDSRKTCVRESSLSKGRKWLR 1653
Query: 389 PLADITNSTSTACANIKQTCEKKRLLRSSISPFKRPRISKFSTPLRTNLSSPNGLSTLSS 448
D + +T IK C K+ + + + T + TN S N +STL S
Sbjct: 1654 EQGDKLGTRNT----IKIECVKEHTEDFAGNASYEHSLVIIRTEIDTNHVSENQVSTLLS 1709
Query: 449 EQSGC 453
+ + C
Sbjct: 1710 DPNVC 1714
Score = 51 (23.0 bits), Expect = 5.6e-47, Sum P(5) = 5.6e-47
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLD-LTSFKHRRFDDSSSNKEN 284
F TA G+++ VS +L+ AR + + + G D QL + S + S +EN
Sbjct: 1931 FSTASGKAIQVSDASLEKARQVFSEMD-G------DAKQLSSMVSLEGNEKPHHSVKREN 1983
Query: 285 DVFTS 289
V S
Sbjct: 1984 SVVHS 1988
Score = 51 (23.0 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 27/91 (29%), Positives = 42/91 (46%)
Query: 5 QIFSDADNNFKWQVSGRILQPEPNGSPIQPHSSSFRLPSMSDLLLEGHSKLREN--GNEG 62
Q+FS+ D + K Q+S + E N +PH S R S+ +G L + GN
Sbjct: 1951 QVFSEMDGDAK-QLSSMV-SLEGNE---KPHHSVKRENSVVHST-QGVLSLPKPLPGNVN 2004
Query: 63 ADNVSTPMFKTGSGKAVPLKQSSIEKALSVL 93
+ S F T GK V + +S++ K +L
Sbjct: 2005 SSVFSG--FSTAGGKLVTVSESALHKVKGML 2033
Score = 46 (21.3 bits), Expect = 7.6e-49, Sum P(6) = 7.6e-49
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 71 FKTGSGKAVPLKQSSIEK 88
F T SGK V + Q S++K
Sbjct: 1498 FHTASGKKVKIMQESLDK 1515
Score = 43 (20.2 bits), Expect = 1.5e-48, Sum P(6) = 1.5e-48
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 39 FRLPSMSDLLLEGHSKLRENGNEGADNVSTP----MFKTGSGKAVPLKQSSIEKA 89
F+ S ++ +G+S + +E D V F+T S K + L + +++K+
Sbjct: 952 FKSNSSLNMKSDGNSDCSDKWSEFLDPVLNHNFGGSFRTASNKEIKLSEHNVKKS 1006
Score = 40 (19.1 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 17/83 (20%), Positives = 31/83 (37%)
Query: 380 NSLGRSSGKPLADITNSTSTACANIKQTCEKKRLLRSSISPFKRPRISKFS-----TPLR 434
++L +S P+ I + + ++T + + + PFK S+F
Sbjct: 2314 SALEKSPSSPIVSILPAHDVSATRTERTRHSGKSTKVFVPPFKMK--SQFHGDEHFNSKN 2371
Query: 435 TNLSSPNGLSTLSSEQSGCEKKV 457
NL N ST + G + V
Sbjct: 2372 VNLEGKNQKSTDGDREDGNDSHV 2394
>UNIPROTKB|P51587 [details] [associations]
symbol:BRCA2 "Breast cancer type 2 susceptibility protein"
species:9606 "Homo sapiens" [GO:0001556 "oocyte maturation"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0006978 "DNA damage response, signal transduction
by p53 class mediator resulting in transcription of p21 class
mediator" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0007569 "cell aging" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0010165
"response to X-ray" evidence=IEA] [GO:0010225 "response to UV-C"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0030097 "hemopoiesis" evidence=IEA] [GO:0032465
"regulation of cytokinesis" evidence=IEA] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=IEA] [GO:0045931 "positive regulation of mitotic
cell cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043234 "protein
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=NAS] [GO:0033593 "BRCA2-MAGE-D1 complex" evidence=IDA]
[GO:0051298 "centrosome duplication" evidence=IMP] [GO:0006289
"nucleotide-excision repair" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP;TAS] [GO:0005813
"centrosome" evidence=IDA] [GO:0043015 "gamma-tubulin binding"
evidence=IPI] [GO:0033205 "cell cycle cytokinesis" evidence=IDA]
[GO:0033600 "negative regulation of mammary gland epithelial cell
proliferation" evidence=IDA] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0002020 "protease binding"
evidence=IPI] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IDA;TAS] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0010484 "H3 histone
acetyltransferase activity" evidence=IDA] [GO:0010485 "H4 histone
acetyltransferase activity" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0043967 "histone H4 acetylation"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_216 InterPro:IPR002093 InterPro:IPR015187
InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103 Pfam:PF09169
PROSITE:PS50138 GO:GO:0005813 GO:GO:0045893 GO:GO:0005654
GO:GO:0007420 GO:GO:0042771 GO:GO:0051298 GO:GO:0008585
GO:GO:0032355 Orphanet:1331 GO:GO:0045931 GO:GO:0030141
GO:GO:0007584 GO:GO:0007283 GO:GO:0010332 Reactome:REACT_111183
GO:GO:0003697 GO:GO:0035264 GO:GO:0000724 GO:GO:0030097
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 MIM:114480
GO:GO:0033205 GO:GO:0001556 GO:GO:0010165 GO:GO:0006289
Pathway_Interaction_DB:foxm1pathway GO:GO:0030879 GO:GO:0010225
Orphanet:145 GO:GO:0032465 GO:GO:0007569 GO:GO:0048478
Orphanet:1333 GO:GO:0006978 CTD:675 HOVERGEN:HBG050731
GO:GO:0033593 GO:GO:0033600 GO:GO:0007090 InterPro:IPR015525
InterPro:IPR015188 InterPro:IPR015205 PANTHER:PTHR11289
Pfam:PF09104 Pfam:PF09121 PIRSF:PIRSF002397 SUPFAM:SSF81872
EMBL:X95152 EMBL:X95153 EMBL:X95154 EMBL:X95155 EMBL:X95156
EMBL:X95157 EMBL:X95158 EMBL:X95159 EMBL:X95160 EMBL:X95161
EMBL:X95162 EMBL:X95163 EMBL:X95164 EMBL:X95165 EMBL:X95166
EMBL:X95167 EMBL:X95168 EMBL:X95169 EMBL:X95170 EMBL:X95171
EMBL:X95172 EMBL:X95173 EMBL:X95174 EMBL:X95175 EMBL:X95176
EMBL:X95177 EMBL:U43746 EMBL:AY436640 EMBL:AL137247 EMBL:AL445212
EMBL:Z74739 EMBL:Z73359 IPI:IPI00412408 PIR:G02334
RefSeq:NP_000050.2 UniGene:Hs.34012 PDB:1N0W PDB:3EU7 PDBsum:1N0W
PDBsum:3EU7 ProteinModelPortal:P51587 SMR:P51587 DIP:DIP-24214N
IntAct:P51587 MINT:MINT-1540184 STRING:P51587 PhosphoSite:P51587
DMDM:14424438 PaxDb:P51587 PRIDE:P51587 DNASU:675
Ensembl:ENST00000380152 Ensembl:ENST00000544455 GeneID:675
KEGG:hsa:675 UCSC:uc001uub.1 GeneCards:GC13P032889 HGNC:HGNC:1101
HPA:HPA026815 MIM:227650 MIM:600185 MIM:605724 MIM:612555
MIM:613029 MIM:613347 neXtProt:NX_P51587 Orphanet:84 Orphanet:654
PharmGKB:PA25412 eggNOG:NOG331296 HOGENOM:HOG000139693
InParanoid:P51587 KO:K08775 OrthoDB:EOG4ZCT3K
EvolutionaryTrace:P51587 GenomeRNAi:675 NextBio:2780
ArrayExpress:P51587 Bgee:P51587 CleanEx:HS_BRCA2
Genevestigator:P51587 GermOnline:ENSG00000139618 GO:GO:0010484
GO:GO:0010485 GO:GO:0031619 GO:GO:0001833 GO:GO:0007141
Uniprot:P51587
Length = 3418
Score = 538 (194.4 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 193/717 (26%), Positives = 314/717 (43%)
Query: 270 FKHRRFDDSSSNKENDVFTSFFRLGTAGTKTASKNFTS--PLRLFSNPVRSRINSENINT 327
++H + SSSN F+++ + T+ P ++F P +++ + +
Sbjct: 2363 YEHLTLEKSSSNLAVSGHP-FYQVSATRNEKMRHLITTGRPTKVFVPPFKTKSHFHRVEQ 2421
Query: 328 SANLIEKFDAVDHDGVSGLNGKIPSIKKPIRSTHGHKAIMDNSVEDDIGSKINSLGRSSG 387
I + + G +G S K I H+ +NS + + + +
Sbjct: 2422 CVRNINLEENRQKQNIDG-HGSDDS-KNKINDNEIHQFNKNNSNQ----AAAVTFTKCEE 2475
Query: 388 KPLADITNSTSTACANIKQTCEKKRLLRSSISPFKRPR-ISKFSTPLRTNLSSPNGLSTL 446
+PL D+ S A +I+ KK+ R + P ++K ST R +L + G
Sbjct: 2476 EPL-DLITSLQNA-RDIQDMRIKKKQ-RQRVFPQPGSLYLAKTSTLPRISLKAAVG---- 2528
Query: 447 SSEQSGCEKKVFSRYPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHNADKYMFHD 506
S C K Y Y + + C+K +A+ H +D + D
Sbjct: 2529 GQVPSACSHKQL--YTYGVSKHCIKIN---SKNAESFQFHTEDYFGKESLWTGKGIQLAD 2583
Query: 507 ASGL-----NCIGAEALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSA 560
L G E + L + G + S++WV NHY+WI+WKLA E + + A
Sbjct: 2584 GGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFA 2643
Query: 561 GKFLTVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIET 620
+ L+ VL +LKYRY+ E++ RSAIK+I+E D + +VLC+S I ET
Sbjct: 2644 NRCLSPERVLLQLKYRYDTEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANISET 2703
Query: 621 HPEAQNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVG 680
+ A+ A +ELTDGWY+V A LD L L G+L VGQK+ + GA L G
Sbjct: 2704 SSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPD 2763
Query: 681 PVSPLEASGSISLQLNINGTYRAHWADRLGFCKGFGA-PLAFRCIKSNGGPVPRTLVGVT 739
+PLEA S+ L+++ N T A W +LGF PL + S+GG V V +
Sbjct: 2764 ACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVIIQ 2823
Query: 740 RIYPVLYKERLSDGRSIVRSERME----CKVMQLYQHRQSMVVEGIVSEFQRGNKD---- 791
R YP+ + E+ S G I R+ER E K ++ Q R + I EF+ ++
Sbjct: 2824 RAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHEENTTKP 2883
Query: 792 ---SHILNDSN----SEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSN 844
S L +GA+L++ ++ A+P + S EQL + ++ L +Q+
Sbjct: 2884 YLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQ 2943
Query: 845 MERSIEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQCELV 904
++ I KA+E+A +E+ ++ + V L +Y K I++IW P+ L
Sbjct: 2944 IQLEIRKAMESAEQKEQGLSRDVTT-VWKLRIVSYSKKEKDSV-ILSIWRPSSDLYSLLT 3001
Query: 905 EGQAYAILGLIPMNSDSNTLYLQARGSTTKWQPLS--PLATEHFKPFFSPRRSVLIS 959
EG+ Y I L S S + + + TK P++ E + PR + S
Sbjct: 3002 EGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQIYQPREPLHFS 3058
Score = 170 (64.9 bits), Expect = 2.5e-09, Sum P(4) = 2.5e-09
Identities = 56/189 (29%), Positives = 92/189 (48%)
Query: 801 EGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGLRE 860
+GA+L++ ++ A+P + S EQL + ++ L +Q+ ++ I KA+E+A +E
Sbjct: 2900 DGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKE 2959
Query: 861 ----RDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQCELVEGQAYAILGLIP 916
RDVT ++R+V + K K S I++IW P+ L EG+ Y I L
Sbjct: 2960 QGLSRDVTTVWKLRIVSYSKKE---KDSV---ILSIWRPSSDLYSLLTEGKRYRIYHLAT 3013
Query: 917 MNSDSNT--LYLQ-ARGSTTKWQPLSPLATEHFKPFFSPRRSVLISNLGEV---PLSSEF 970
S S + +Q A T++Q L P++ E + PR + S + P SE
Sbjct: 3014 SKSKSKSERANIQLAATKKTQYQQL-PVSDEILFQIYQPREPLHFSKFLDPDFQPSCSEV 3072
Query: 971 DIAAFVVHV 979
D+ FVV V
Sbjct: 3073 DLIGFVVSV 3081
Score = 86 (35.3 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 31/160 (19%), Positives = 69/160 (43%)
Query: 114 FGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEG 173
F S++ FQT SGK ++++ + + D E L + + S ++++
Sbjct: 1421 FETSDTFFQTASGKNISVAKESFNKIVNFF-------DQKPEELHNFSLNSELHSDIRKN 1473
Query: 174 VKGNVFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRS 233
+ +T +++ + ++ N++ + Q E +P + F TA G+
Sbjct: 1474 KMDILSYEETDIVKHKILKES--VPVGTGNQLVTFQGQPERDEKIKEPTLLGFHTASGKK 1531
Query: 234 LSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHR 273
+ ++ ++L +NL + E GT ++TSF H+
Sbjct: 1532 VKIAKESLDKVKNLFDEKEQGTS---------EITSFSHQ 1562
Score = 79 (32.9 bits), Expect = 3.9e-09, Sum P(4) = 3.9e-09
Identities = 66/302 (21%), Positives = 116/302 (38%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLL--GLEEGR----NDWSFEG--LQHTRMTSTPRFEVKE 172
F T + ++S L+ AK L G+ +G+ N + G L ST + E
Sbjct: 1671 FYTSCSRKTSVSQTSLLEAKKWLREGIFDGQPERINTADYVGNYLYENNSNST----IAE 1726
Query: 173 GVKGNVFESDTSVLRPSSISKA-GFAESRFKNK---ISSNMMQTEGLNSAPKPPQIKFQT 228
K ++ E + L SS+S + + N +S N + + G+ K + + T
Sbjct: 1727 NDKNHLSEKQDTYLSNSSMSNSYSYHSDEVYNDSGYLSKNKLDS-GIEPVLKNVEDQKNT 1785
Query: 229 AGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSF----KHRRFDDSSSNKEN 284
+ + +S DA Y P+ T ++ V++L +S K+ S SN N
Sbjct: 1786 SFSKVISNVKDANAY-------PQ--TVNEDICVEELVTSSSPCKNKNAAIKLSISNSNN 1836
Query: 285 -DVFTSFFRLGTAGTKTASKNFTSPLR-LFSNPVRSRINSENINTSANLIEKFDAVDHDG 342
+V FR+ + S ++ +F++ I N N S K A ++
Sbjct: 1837 FEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEA 1896
Query: 343 VSGLNGKIP-SIKKPIRSTHGHKAIMDNSVEDDIGSKINSLGRSSGKPLA--DITNSTST 399
+ + S+ STH HK D E+ + N G ++ D++ TS
Sbjct: 1897 LDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHNQNMSGLEKVSKISPCDVSLETSD 1956
Query: 400 AC 401
C
Sbjct: 1957 IC 1958
Score = 62 (26.9 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 29/90 (32%), Positives = 41/90 (45%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKEND 285
F +A G L+VS++ALQ A L D E + +V + L SS+K +D
Sbjct: 1219 FYSAHGTKLNVSTEALQKAVKLFSDIENISEETSAEVHPISL-----------SSSKCHD 1267
Query: 286 VFTSFFRLGTAGTKTAS-KNFTSPLRLFSN 314
S F++ KT S KN L L +N
Sbjct: 1268 SVVSMFKIENHNDKTVSEKNNKCQLILQNN 1297
Score = 60 (26.2 bits), Expect = 9.9e-47, Sum P(4) = 9.9e-47
Identities = 29/116 (25%), Positives = 49/116 (42%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKEND 285
F TA G+S+ VS +LQ AR + + E T +V L FK D + +EN
Sbjct: 1978 FSTASGKSVQVSDASLQNARQVFSEIEDST--KQVFSKVL----FKSNEHSDQLTREENT 2031
Query: 286 VF-TSFFRLGTAGTKTASKNFTSPLRLFSNPVRSRIN--SENINTSANLIEKFDAV 338
T + G N +S FS +++ +++ ++E+FD +
Sbjct: 2032 AIRTPEHLISQKGFSYNVVN-SSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLI 2086
Score = 57 (25.1 bits), Expect = 1.5e-46, Sum P(3) = 1.5e-46
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 82 KQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKS 141
K S I L T + C S G+ H + + +F T SGK+V +S A L A+
Sbjct: 1941 KVSKISPCDVSLETSDICKCSI-GKLHKSVSSAN-TCGIFSTASGKSVQVSDASLQNARQ 1998
Query: 142 L 142
+
Sbjct: 1999 V 1999
Score = 53 (23.7 bits), Expect = 9.1e-47, Sum P(2) = 9.1e-47
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 5 QIFSDADNNFKWQVSGRIL--QPEPNGSPIQPHSSSFRLPSMSDLLLEGHSKLRENGNEG 62
Q+FS+ +++ K QV ++L E + + +++ R P + +G S N +
Sbjct: 1998 QVFSEIEDSTK-QVFSKVLFKSNEHSDQLTREENTAIRTPEHL-ISQKGFSYNVVNSSAF 2055
Query: 63 ADNVSTPMFKTGSGKAVPLKQSSIEKALSVL 93
+ F T SGK V + +SS+ K VL
Sbjct: 2056 SG------FSTASGKQVSILESSLHKVKGVL 2080
Score = 51 (23.0 bits), Expect = 6.7e-46, Sum P(4) = 6.7e-46
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 101 ISFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLL 143
IS G + N FS F T SGK V+I + L + K +L
Sbjct: 2040 ISQKGFSYNVVNSSAFSG--FSTASGKQVSILESSLHKVKGVL 2080
Score = 49 (22.3 bits), Expect = 6.7e-46, Sum P(4) = 6.7e-46
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 70 MFKTGSGKAVPLKQSSIEKALSVLGTDND 98
+F T SGK+V + +S++ A V D
Sbjct: 1977 IFSTASGKSVQVSDASLQNARQVFSEIED 2005
Score = 48 (22.0 bits), Expect = 9.9e-47, Sum P(4) = 9.9e-47
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 60 NEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDN 97
N V P F+ SGK V + +I+K + TD+
Sbjct: 1833 NSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIF-TDS 1869
Score = 47 (21.6 bits), Expect = 1.4e-48, Sum P(4) = 1.4e-48
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 5 QIFSDADNNFKWQVS 19
++FSD +NNF +QV+
Sbjct: 881 ELFSDNENNFVFQVA 895
Score = 45 (20.9 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 96 DNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLL-GLEE 147
+ND +AG P N F S F+T S K + +S + ++K +EE
Sbjct: 986 NNDYMNKWAGLLGPISN-HSFGGS-FRTASNKEIKLSEHNIKKSKMFFKDIEE 1036
Score = 45 (20.9 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 41/166 (24%), Positives = 64/166 (38%)
Query: 304 NFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPSIKKP--IRSTH 361
N + P N V + N+ I+T KF HD S KIP +K I +
Sbjct: 560 NGSWPATTTQNSVALK-NAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSA 618
Query: 362 GHKAIMDNS----VEDDIGSKINSLGRS-----SGKPLADITNSTSTA---CANIKQTCE 409
+A + D G +S+ RS S +P +T+S T C+ +TC
Sbjct: 619 QFEANAFEAPLTFANADSGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSR-NETCS 677
Query: 410 KKRLLRSSISPFKRPRISKFSTPLRTNLSSPNGLSTLSSEQSG-CE 454
++ + +K + +K L +P +LS Q G CE
Sbjct: 678 NNTVISQDLD-YKEAKCNKEKLQL---FITPEA-DSLSCLQEGQCE 718
Score = 42 (19.8 bits), Expect = 3.1e-45, Sum P(5) = 3.1e-45
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 71 FKTGSGKAVPLKQSSIEK 88
F T SGK V + + S++K
Sbjct: 1524 FHTASGKKVKIAKESLDK 1541
Score = 41 (19.5 bits), Expect = 2.8e-45, Sum P(4) = 2.8e-45
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 168 FEVKEGVKGNVFESDTSVLRPSSISK 193
+++ + +KGN +ESD + + + K
Sbjct: 792 YKMSDKLKGNNYESDVELTKNIPMEK 817
Score = 40 (19.1 bits), Expect = 1.4e-48, Sum P(4) = 1.4e-48
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 71 FKTGSGKAVPLKQSSIEKA 89
F+T S K + L + +I+K+
Sbjct: 1009 FRTASNKEIKLSEHNIKKS 1027
Score = 40 (19.1 bits), Expect = 4.9e-45, Sum P(5) = 4.9e-45
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 67 STPMFKTGSGKAVPLKQSSIEKALS 91
S F+T SGK + + + S K ++
Sbjct: 1424 SDTFFQTASGKNISVAKESFNKIVN 1448
Score = 38 (18.4 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 67 STPMFKTGSGKAVPLKQSSIEK 88
STP+ G +PL QS +++
Sbjct: 76 STPIIFKEQGLTLPLYQSPVKE 97
Score = 38 (18.4 bits), Expect = 3.1e-45, Sum P(5) = 3.1e-45
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 112 NGFGFSNSLFQTGSGKTVNISSAGLVRAKSL 142
N F F+ SGK V +S + + K +
Sbjct: 1835 NNFEVGPPAFRIASGKIVCVSHETIKKVKDI 1865
Score = 37 (18.1 bits), Expect = 1.4e-45, Sum P(4) = 1.4e-45
Identities = 11/58 (18%), Positives = 23/58 (39%)
Query: 41 LPSMSDLLLEGHSKLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDND 98
+ + D+ + SK+ + NE + G +A+ + + +L DND
Sbjct: 1859 IKKVKDIFTDSFSKVIKENNENKSKICQTKIMAGCYEALDDSEDILHNSL-----DND 1911
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 17/81 (20%), Positives = 28/81 (34%)
Query: 295 TAGTKTASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDG--VSGLNGKIPS 352
TA K+ N L+ + S +SEN N F + V+ I
Sbjct: 226 TANVKSYFSNHDESLKKNDRFIASVTDSENTNQREAASHGFGKTSGNSFKVNSCKDHIGK 285
Query: 353 IKKPIRSTHGHKAIMDNSVED 373
+ ++ ++D S ED
Sbjct: 286 SMPNVLEDEVYETVVDTSEED 306
>UNIPROTKB|F1Q0X3 [details] [associations]
symbol:BRCA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051298 "centrosome duplication"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043015
"gamma-tubulin binding" evidence=IEA] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=IEA] [GO:0033600 "negative regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0033593
"BRCA2-MAGE-D1 complex" evidence=IEA] [GO:0033205 "cell cycle
cytokinesis" evidence=IEA] [GO:0032465 "regulation of cytokinesis"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IEA]
[GO:0030097 "hemopoiesis" evidence=IEA] [GO:0010485 "H4 histone
acetyltransferase activity" evidence=IEA] [GO:0010484 "H3 histone
acetyltransferase activity" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0010225 "response to UV-C"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0007569
"cell aging" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0006978 "DNA damage
response, signal transduction by p53 class mediator resulting in
transcription of p21 class mediator" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0002020 "protease
binding" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0001556 "oocyte maturation"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0007090 "regulation of
S phase of mitotic cell cycle" evidence=IEA] InterPro:IPR002093
InterPro:IPR015187 InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103
Pfam:PF09169 PROSITE:PS50138 GO:GO:0005634 GO:GO:0005813
GO:GO:0045893 GO:GO:0007420 GO:GO:0042771 GO:GO:0051298
GO:GO:0008585 GO:GO:0045931 GO:GO:0030141 GO:GO:0007283
GO:GO:0010332 GO:GO:0003697 GO:GO:0000724 GO:GO:0030097
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0033205
GO:GO:0001556 GO:GO:0010165 GO:GO:0006289 GO:GO:0010225
GO:GO:0032465 GO:GO:0007569 GO:GO:0048478 GO:GO:0006978
GO:GO:0033593 GO:GO:0033600 GO:GO:0007090 InterPro:IPR015525
InterPro:IPR015188 InterPro:IPR015205 PANTHER:PTHR11289
Pfam:PF09104 Pfam:PF09121 PIRSF:PIRSF002397 SUPFAM:SSF81872
GO:GO:0010484 GO:GO:0010485 GO:GO:0001833 GO:GO:0007141
GeneTree:ENSGT00390000003602 OMA:LGFHTAS EMBL:AAEX03014218
Ensembl:ENSCAFT00000010309 Uniprot:F1Q0X3
Length = 3446
Score = 514 (186.0 bits), Expect = 7.2e-48, Sum P(3) = 7.2e-48
Identities = 157/536 (29%), Positives = 248/536 (46%)
Query: 451 SGCEKKVFSRYPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHNADKYMFHDASGL 510
S C K Y Y + + CVK +A+ H QD + + + D L
Sbjct: 2552 SACSHKQL--YMYGVSKHCVKIN---SKNAESFQFHAQDYFGKEGLWSGEGIQLADGGWL 2606
Query: 511 -----NCIGAEALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFL 564
IG E + L + G S++WV NHY+WI+WKLA E + + A + L
Sbjct: 2607 IPSNDGKIGKEEFYRALCDTPGVDPNCISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCL 2666
Query: 565 TVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEA 624
+ VL +LKYRY+ E++ RSAIK+I+E D + +VLCIS I + ET
Sbjct: 2667 SPERVLLQLKYRYDVEIDKSRRSAIKKIMERDDTAAKTLVLCISEIISSSADISETSSSK 2726
Query: 625 QNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSP 684
+ +ELTDGWY++ A LD L + G+L VGQK+ I GA L G +P
Sbjct: 2727 TSSVGTKKVGIIELTDGWYAIKAQLDPPLLALVKNGRLTVGQKITIHGAELVGSPDACTP 2786
Query: 685 LEASGSISLQLNINGTYRAHWADRLGFCKGFGA-PLAFRCIKSNGGPVPRTLVGVTRIYP 743
LEA S+ L+++ N T A W +LGF PL + S+GG V V V R YP
Sbjct: 2787 LEAPESLMLKISANSTRPACWYTKLGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYP 2846
Query: 744 VLYKERLSDGRSIVRSERME----CKVMQLYQHRQSMVVEGIVSEFQRGNKD-------S 792
+ + ER G I R+ER E K ++ Q + ++ I +EF++ +++ S
Sbjct: 2847 IQWMERTPSGLCIFRNEREEEKEATKYAEIQQKKLEVLFNKIQAEFEKNDENITKQCIPS 2906
Query: 793 HILNDSN----SEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERS 848
L +GA+L++ + +P + S EQL + ++ L +Q+ ++
Sbjct: 2907 CALTRQQICALQDGAELYEAVTNAPDPSDLEGYFSEEQLRALNNHRQMLNDKKQAQIQLE 2966
Query: 849 IEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGSSREGI-ITIWNPAEKQQCELVEGQ 907
+KA+E+A E+ + P V L +Y+ K ++ + ++IW P+ L+EG+
Sbjct: 2967 FKKAMESAEQGEQ-ILPRDVTTVWKLRIISYRKK--EKDSVTLSIWRPSPDLYSLLIEGK 3023
Query: 908 AYAILGLIPMNSDSNTLYLQARGSTTKWQPLS--PLATEHFKPFFSPRRSVLISNL 961
Y I L S S + + + TK P + E + PR + + L
Sbjct: 3024 RYRIYHLAASQSKSKSGKANTQLTATKKTQYQQLPASDEILSQVYQPREPLYFNKL 3079
Score = 152 (58.6 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 60/245 (24%), Positives = 112/245 (45%)
Query: 758 RSERMEC-KVMQLYQHRQSMVVEGIVSEFQRGNKD-------SHILNDSN----SEGAKL 805
R E E K ++ Q + ++ I +EF++ +++ S L +GA+L
Sbjct: 2864 REEEKEATKYAEIQQKKLEVLFNKIQAEFEKNDENITKQCIPSCALTRQQICALQDGAEL 2923
Query: 806 FKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGLRE----R 861
++ + +P + S EQL + ++ L +Q+ ++ +KA+E+A E R
Sbjct: 2924 YEAVTNAPDPSDLEGYFSEEQLRALNNHRQMLNDKKQAQIQLEFKKAMESAEQGEQILPR 2983
Query: 862 DVTPFMRVRVVGLTGKNYQGKGSSREGI-ITIWNPAEKQQCELVEGQAYAILGLIPMNSD 920
DVT ++R++ +Y+ K ++ + ++IW P+ L+EG+ Y I L S
Sbjct: 2984 DVTTVWKLRII-----SYRKK--EKDSVTLSIWRPSPDLYSLLIEGKRYRIYHLAASQSK 3036
Query: 921 SNTLYLQARGSTTK---WQPLSPLATEHFKPFFSPRRSVLISNLGEV---PLSSEFDIAA 974
S + + + TK +Q L P + E + PR + + L + P SE D+
Sbjct: 3037 SKSGKANTQLTATKKTQYQQL-PASDEILSQVYQPREPLYFNKLLDPDFQPPCSEVDLIG 3095
Query: 975 FVVHV 979
FVV V
Sbjct: 3096 FVVSV 3100
Score = 95 (38.5 bits), Expect = 7.2e-48, Sum P(3) = 7.2e-48
Identities = 55/252 (21%), Positives = 101/252 (40%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLG---LEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGN 177
FQT S K + +S L +A+SLL EE N++S + L + P ++K+ N
Sbjct: 1423 FQTASRKNIRVSKESLNKARSLLNQKWTEEELNNFS-DSLNSELL---PGIDIKKTDISN 1478
Query: 178 VFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEG-LNSAPKPPQIKFQTAGGRSLSV 236
E + R I+K +N + + E + + + F TA G+ + +
Sbjct: 1479 -HEVIENTERKDKITKESDLIGT-ENILLILQQRPESKIKKIKESAVLGFHTASGKKIEI 1536
Query: 237 SSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKE----NDVFTSFFR 292
+ ++L +NL F E + D ++T+F HR S +E ++
Sbjct: 1537 TKESLDKVKNL---------FEEKEQDNSEITNFSHRGAKMSKDREECKDGRELACGTTE 1587
Query: 293 LGTAGTKTASKNFTSPLRLFSNPV---RSRINSENINTSANLIEKFDAVDHDGVSGLNGK 349
+ T + + +L SN + R R+ S+N+ ++ D N +
Sbjct: 1588 ITTTPEYEETHSSLEKKKLVSNEIAALRPRLLSDNLYKQTENLKISDHASQKVDVHENTE 1647
Query: 350 IPSIKKPIRSTH 361
+ KKP T+
Sbjct: 1648 KETAKKPTMYTN 1659
Score = 70 (29.7 bits), Expect = 2.9e-45, Sum P(3) = 2.9e-45
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSS 280
F +A G L+V S+ALQ A+ L D E V+VD+ SF +++DS S
Sbjct: 1217 FYSARGTKLNVGSEALQKAKKLFSDLENINEETSVEVDR----SFSSSKYNDSVS 1267
Score = 66 (28.3 bits), Expect = 3.4e-45, Sum P(4) = 3.4e-45
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGT--FFHEVDVDQLDLTSFKHRRFDDSSSNKE 283
F TA G+S+ VS A+Q AR + E F EV + + +H + +N+E
Sbjct: 2003 FSTASGKSVQVSDAAIQKAREVFSKLEDSAKQLFPEVSLKDNE----EH---SEKFTNEE 2055
Query: 284 NDV-FTSFFRLGTA--GTKTAS 302
N V +TS L +A G +TAS
Sbjct: 2056 NTVIYTSQNLLSSAFSGFRTAS 2077
Score = 59 (25.8 bits), Expect = 4.1e-44, Sum P(3) = 4.1e-44
Identities = 26/114 (22%), Positives = 49/114 (42%)
Query: 109 PRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLLG-LEEGRNDWSFEGLQHTRMTSTPR 167
P+ + + +F T SGK+V +S A + +A+ + LE+ E + +
Sbjct: 1991 PKSVSYTNACGIFSTASGKSVQVSDAAIQKAREVFSKLEDSAKQLFPEVSLKDNEEHSEK 2050
Query: 168 FEVKEGV----KGNVFESDTSVLRPSSISKAGFAES---RFKNKISS-NMMQTE 213
F +E N+ S S R +S + +ES + K + N+++TE
Sbjct: 2051 FTNEENTVIYTSQNLLSSAFSGFRTASGKQVPVSESALCKVKGMLEEFNLIRTE 2104
Score = 57 (25.1 bits), Expect = 3.1e-43, Sum P(4) = 3.1e-43
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 224 IKFQTAGGRSLSVSSDALQYARNLLG----DPELGTFFHEVDVDQL 265
+ FQTA +++ VS ++L AR+LL + EL F ++ + L
Sbjct: 1421 LSFQTASRKNIRVSKESLNKARSLLNQKWTEEELNNFSDSLNSELL 1466
Score = 55 (24.4 bits), Expect = 1.1e-43, Sum P(3) = 1.1e-43
Identities = 36/185 (19%), Positives = 68/185 (36%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVN 130
F T SGK + + + S++K ++ H G S + G+ +
Sbjct: 1526 FHTASGKKIEITKESLDKVKNLFEEKEQDNSEITNFSH---RGAKMSKDREECKDGREL- 1581
Query: 131 ISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTST-PRFEVKEGVKGNVFESDTSV-LRP 188
+ G + EE + + L + + PR + N+++ ++ +
Sbjct: 1582 --ACGTTEITTTPEYEETHSSLEKKKLVSNEIAALRPRL-----LSDNLYKQTENLKISD 1634
Query: 189 SSISKAGFAESRFKNKISSNMMQT-EGLNSAPKPPQIKFQTAGGRSLSVSSDALQYARNL 247
+ K E+ K M T + SA + + F T GR +SVS +L A+
Sbjct: 1635 HASQKVDVHENTEKETAKKPTMYTNQSTYSAIENSPLTFYTGHGRKISVSEASLFEAKKW 1694
Query: 248 LGDPE 252
L + E
Sbjct: 1695 LREGE 1699
Score = 53 (23.7 bits), Expect = 3.4e-45, Sum P(4) = 3.4e-45
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLGLEEGRND 151
F TG G+ +++S A L AK L EG D
Sbjct: 1673 FYTGHGRKISVSEASLFEAKKWL--REGEWD 1701
Score = 53 (23.7 bits), Expect = 4.5e-43, Sum P(3) = 4.5e-43
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 70 MFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPREN 112
+F T SGK+V + ++I+KA V D E ++N
Sbjct: 2002 IFSTASGKSVQVSDAAIQKAREVFSKLEDSAKQLFPEVSLKDN 2044
Score = 52 (23.4 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVL 93
F+T SGK VP+ +S++ K +L
Sbjct: 2073 FRTASGKQVPVSESALCKVKGML 2095
Score = 48 (22.0 bits), Expect = 5.7e-43, Sum P(3) = 5.7e-43
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 82 KQSSIEKALSVLGT-DNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAK 140
KQ+S K + LG+ D++ I+ +G ++N + ++ T + K L A+
Sbjct: 2450 KQNS--KDIDELGSGDSEKNINDSGIHQLKKNNSNQAATIIFTKNEKEPLDLITNLQNAR 2507
Query: 141 SL--LGLEEGRNDWSFE--GLQHTRMTST-PRFEVKEGVKGNV 178
+ + +++ + F G + TST PR ++E V+G V
Sbjct: 2508 DIQDMRIKKKQRQHIFPQPGSLYLAKTSTLPRISLREAVEGRV 2550
Score = 47 (21.6 bits), Expect = 7.2e-48, Sum P(3) = 7.2e-48
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 45 SDLLLE--GHSKLRENGNEGADNVSTPMF----KTGSGKAVPLKQSSIEKA 89
SD++ + G+S +N +D +S F KT S K + L +++I K+
Sbjct: 971 SDIVRKSNGNSDYMDNWARLSDPISNHSFENGFKTASNKEIKLSENNIRKS 1021
Score = 44 (20.5 bits), Expect = 6.0e-45, Sum P(3) = 6.0e-45
Identities = 33/148 (22%), Positives = 60/148 (40%)
Query: 96 DNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFE 155
DN +S H ENGF +T S K + +S + ++K L F+
Sbjct: 985 DNWARLSDPISNHSFENGF-------KTASNKEIKLSENNIRKSKML-----------FK 1026
Query: 156 GLQHTRMTSTPRFEV--KEGVKGNVFESDTSVLRPSSISK-AGFAESRFKNKISSNMMQT 212
++ T+ E+ ++ S + L P SI+ +GF ++ S+ + +
Sbjct: 1027 DIEEHYPTNLACLEIVNTSSLESQKKPSKSHALDPQSINIISGFVQN------STYVSDS 1080
Query: 213 EGLNSAPKPPQIKFQTAGGRSLSVSSDA 240
E ++AP +K R+L+ S A
Sbjct: 1081 ESGHTAPPTLSLKQDFDSNRNLTPSQKA 1108
Score = 43 (20.2 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 45 SDLLLEGHSKLRENGNEGADNVST--PMFKTGSGKAVPLKQSSIEKALSVL 93
S + + +L N + + T F+T S K + + + S+ KA S+L
Sbjct: 1395 SHVTMSNKQQLTANTGQNIKDFDTFYLSFQTASRKNIRVSKESLNKARSLL 1445
Score = 43 (20.2 bits), Expect = 7.6e-45, Sum P(3) = 7.6e-45
Identities = 20/67 (29%), Positives = 26/67 (38%)
Query: 138 RAKSLLGLE-EGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFESDTSVLRPSSISKAGF 196
R LG E + WS ++ST E V VF +DT+ + S S
Sbjct: 171 RISESLGAEVDSDMSWSSSLATPPTLSSTVLIVRDEEVSAAVFPNDTTAIFKSCFSNHD- 229
Query: 197 AESRFKN 203
ES KN
Sbjct: 230 -ESLKKN 235
Score = 43 (20.2 bits), Expect = 3.7e-44, Sum P(4) = 3.7e-44
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLG-LEEGRNDWSFE 155
F + G +N+ S L +AK L LE + S E
Sbjct: 1217 FYSARGTKLNVGSEALQKAKKLFSDLENINEETSVE 1252
Score = 43 (20.2 bits), Expect = 4.5e-43, Sum P(3) = 4.5e-43
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 226 FQTAGGRSLSVSSDALQYARNLL 248
F+TA G+ + VS AL + +L
Sbjct: 2073 FRTASGKQVPVSESALCKVKGML 2095
Score = 43 (20.2 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
Identities = 48/251 (19%), Positives = 101/251 (40%)
Query: 174 VKGNVFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRS 233
V+ +V ++ T V+ K S K+ SS++ N + Q+K
Sbjct: 907 VRDSVPKNSTMVVCTDLDDKQTAKVSIMKDCYSSSIDDLTERNRSTIKQQLKMTLDQDSK 966
Query: 234 LSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRL 293
++SD ++ + G+ + + + D + SF++ F ++SNKE + + R
Sbjct: 967 SDITSDIVRKSN---GNSDYMDNWARLS-DPISNHSFENG-FK-TASNKEIKLSENNIRK 1020
Query: 294 GTAGTKTASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPSI 353
K +++ P L + +N+ ++ S K A+D ++ ++G + +
Sbjct: 1021 SKMLFKDIEEHY--PTNLACLEI---VNTSSLE-SQKKPSKSHALDPQSINIISGFVQNS 1074
Query: 354 KKPIRSTHGHKAIMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQTCEKKRL 413
S GH A S++ D S N L S + +++ + + + T +K
Sbjct: 1075 TYVSDSESGHTAPPTLSLKQDFDSNRN-LTPSQKAEITELSTILEESGSQFEFTQFRKPS 1133
Query: 414 LRSSISPFKRP 424
+PF+ P
Sbjct: 1134 HIIQKNPFEMP 1144
Score = 38 (18.4 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 378 KINSLGRSSGKPLADITNSTSTACANIKQT--CEKKRLLRSSISPFKRPRISK 428
K N L S KP +T+S T + + S +K +I+K
Sbjct: 634 KKNCLQNDSEKPALSLTSSFGTILRKVSSNGASSPNNKIISQDPDYKEAKINK 686
Score = 37 (18.1 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 386 SGKPLADITNSTSTACANIKQTCEK 410
SGK DIT+S +C +K ++
Sbjct: 99 SGK---DITDSKHKSCCTMKSKMDR 120
>RGD|2219 [details] [associations]
symbol:Brca2 "breast cancer 2, early onset" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO;ISS;IBA] [GO:0001556 "oocyte maturation"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=ISO] [GO:0002020 "protease binding" evidence=ISO]
[GO:0003697 "single-stranded DNA binding" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IBA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO;IBA] [GO:0006289 "nucleotide-excision
repair" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0006978 "DNA damage response, signal transduction by p53 class
mediator resulting in transcription of p21 class mediator"
evidence=ISO] [GO:0007090 "regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0007141 "male meiosis I" evidence=ISO]
[GO:0007283 "spermatogenesis" evidence=ISO;IMP] [GO:0007420 "brain
development" evidence=ISO] [GO:0007569 "cell aging" evidence=ISO]
[GO:0007584 "response to nutrient" evidence=IEP] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008585 "female gonad development"
evidence=ISO] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=ISO] [GO:0010165 "response to X-ray"
evidence=ISO] [GO:0010225 "response to UV-C" evidence=ISO]
[GO:0010332 "response to gamma radiation" evidence=ISO] [GO:0010484
"H3 histone acetyltransferase activity" evidence=ISO] [GO:0010485 "H4
histone acetyltransferase activity" evidence=ISO] [GO:0030097
"hemopoiesis" evidence=ISO] [GO:0030141 "secretory granule"
evidence=ISO] [GO:0030879 "mammary gland development" evidence=IMP]
[GO:0031619 "homologous chromosome orientation involved in meiotic
metaphase I plate congression" evidence=IMP] [GO:0032355 "response to
estradiol stimulus" evidence=IEP] [GO:0032465 "regulation of
cytokinesis" evidence=ISO] [GO:0033205 "cell cycle cytokinesis"
evidence=ISO] [GO:0033593 "BRCA2-MAGE-D1 complex" evidence=ISO]
[GO:0033600 "negative regulation of mammary gland epithelial cell
proliferation" evidence=ISO] [GO:0035264 "multicellular organism
growth" evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IBA] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISO]
[GO:0043009 "chordate embryonic development" evidence=ISO]
[GO:0043015 "gamma-tubulin binding" evidence=ISO;IBA] [GO:0043234
"protein complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0048478 "replication fork protection" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=ISO] [GO:0051298
"centrosome duplication" evidence=ISO;IBA] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002093 InterPro:IPR015187
InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103 Pfam:PF09169
PROSITE:PS50138 RGD:2219 GO:GO:0005634 GO:GO:0005813 GO:GO:0045893
GO:GO:0007420 GO:GO:0042771 GO:GO:0051298 GO:GO:0008585 GO:GO:0032355
GO:GO:0045931 GO:GO:0030141 GO:GO:0007584 GO:GO:0007283 GO:GO:0042127
GO:GO:0010332 GO:GO:0003697 GO:GO:0035264 GO:GO:0000724 GO:GO:0030097
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0033205
GO:GO:0001556 GO:GO:0010165 GO:GO:0006289 GO:GO:0030879 GO:GO:0043015
GO:GO:0010225 GO:GO:0032465 GO:GO:0007569 GO:GO:0048478 GO:GO:0006978
HOVERGEN:HBG050731 GO:GO:0033593 GO:GO:0033600 GO:GO:0007090
InterPro:IPR015525 InterPro:IPR015188 InterPro:IPR015205
PANTHER:PTHR11289 Pfam:PF09104 Pfam:PF09121 PIRSF:PIRSF002397
SUPFAM:SSF81872 eggNOG:NOG331296 HOGENOM:HOG000139693
OrthoDB:EOG4ZCT3K GO:GO:0010484 GO:GO:0010485 GO:GO:0031619
GO:GO:0001833 GO:GO:0007141 EMBL:U89653 IPI:IPI00366614 PIR:T42207
UniGene:Rn.103225 PDB:1IYJ PDBsum:1IYJ ProteinModelPortal:O35923
SMR:O35923 STRING:O35923 PRIDE:O35923 UCSC:RGD:2219 InParanoid:O35923
EvolutionaryTrace:O35923 NextBio:672749 ArrayExpress:O35923
Genevestigator:O35923 GermOnline:ENSRNOG00000001111 Uniprot:O35923
Length = 3343
Score = 516 (186.7 bits), Expect = 3.6e-47, Sum P(6) = 3.6e-47
Identities = 169/563 (30%), Positives = 263/563 (46%)
Query: 426 ISKFSTPLRTNLSSPNGLSTLSSEQSGCEKKVFSRYPYQIPRMCVKEYFGMPPSAQGML- 484
++K ST R +L + G S S C K Y Y + + C+ Q +
Sbjct: 2442 LTKSSTLPRISLQAAVG----DSVPSACSPKQL--YMYGVSKACISVNSKNAEYFQFAIE 2495
Query: 485 DHL-QDQVRQMKSHN-ADK-YMFHDASGLNCIGAEALFNMLAQS-GASTQYASKLWVSNH 540
DH ++ + K AD ++ G G E + L + G + S +WVSNH
Sbjct: 2496 DHFGKEALCAGKGFRLADGGWLIPSDDGK--AGKEEFYRALCDTPGVDPKLISSVWVSNH 2553
Query: 541 YKWIVWKLACYERCYLAKSAGKFLTVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPS 600
Y+WIVWKLA E + + A + L VL +LKYRY+ E++N RSA+K+ILE D +
Sbjct: 2554 YRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSSRSALKKILERDDTAA 2613
Query: 601 SMMVLCISAIHMNCVPKIETHPEAQNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAG 660
+VLC+S I ET + +++ +ELTDGWY+V A LD L + +G
Sbjct: 2614 KTLVLCVSDIISLSTNVSETSGSKASSEDSNKVDTIELTDGWYAVKAQLDPPLLALVKSG 2673
Query: 661 KLFVGQKLRIWGAILCGWVGPVSPLEASGSISLQLNINGTYRAHWADRLGFCKGFGA-PL 719
+L VGQK+ GA L G +PLEA S+ L+++ N T A W +LGF PL
Sbjct: 2674 RLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSKLGFFHDPRPFPL 2733
Query: 720 AFRCIKSNGGPVPRTLVGVTRIYPVLYKERLSDGRSIVRSERMECKVMQLYQHRQSMVVE 779
+ S+GG V V V R+YP+ + E+ G I R+ER E K + Q +E
Sbjct: 2734 PLSSLFSDGGNVGCVDVIVQRVYPLQWVEKTVSGSYIFRNEREEEKEALRFAEAQQKKLE 2793
Query: 780 GIVS----EFQRGNKD-------SHILNDSN----SEGAKLFKMLETVAEPEVIMAEMSP 824
+ + E + +D S L +GA+L+ ++ ++PE + S
Sbjct: 2794 ALFTKVHTELKEHEEDIAQRRVLSRALTRQQVHALQDGAELYAAVQDASDPEHLETCFSE 2853
Query: 825 EQLTSFATYQAKLEATRQSNMERSIEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGS 884
EQL + Y+ L +Q+ ++ KALE A +E ++ + V L +Y K
Sbjct: 2854 EQLRALNNYRQMLSDKKQARIQSEFRKALE-AAEKEEGLSRDVST-VWKLRVTSY--KKR 2909
Query: 885 SREGIITIWNPAEKQQCELVEGQAYAILGLIPMNSDSN----TLYLQARGSTTKWQPLSP 940
+ +++IW P+ L EGQ Y I L S + ++ L A T++Q L P
Sbjct: 2910 EKSALLSIWRPSSDLPSLLTEGQRYRIYHLSVSKSKNKFEWPSIQLTAT-KRTQYQQL-P 2967
Query: 941 LATEHFKPFFSPRRSVLISNLGE 963
+++E + PR + S L +
Sbjct: 2968 VSSETLLQLYQPRELLPFSKLSD 2990
Score = 68 (29.0 bits), Expect = 4.2e-45, Sum P(5) = 4.2e-45
Identities = 45/207 (21%), Positives = 83/207 (40%)
Query: 81 LKQSSIE-KALSVLGTDNDCGISFAGEEH-PR---ENGFGFSNSLFQTGSGKTVNISSAG 135
+K+S + L V+ + C + + +E P E N FQT SGK + +S
Sbjct: 1367 IKESVSDLTCLEVMKAEETCHMKSSDKEQLPSDKMEQNMKEFNISFQTASGKNIRVSKES 1426
Query: 136 LVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFESDTSVLRPSSISKAG 195
L ++ ++L D E L T + + ++ G+ N + S + S K
Sbjct: 1427 LNKSVNIL-------DQETEDLTVT--SDSLNSKILCGI--NKDKMHISCHKKSINIKKV 1475
Query: 196 FAESRFK----NKISSNMMQTE-GLNSAPKPPQIKFQTAGGRSLSVSSDALQYARNLLGD 250
F E F +++ + E + S +P + F TA G+ + + ++L +NL +
Sbjct: 1476 F-EEHFPIGTVSQLPALQQYPEYEIESIKEPTLLSFHTASGKKVKIMQESLDKVKNLFDE 1534
Query: 251 PEL----GTFFHEVDVDQLDLTSFKHR 273
+ F H+ D +K R
Sbjct: 1535 TQYVRKTTNFGHQESKPLKDREDYKER 1561
Score = 64 (27.6 bits), Expect = 3.1e-44, Sum P(4) = 3.1e-44
Identities = 38/168 (22%), Positives = 66/168 (39%)
Query: 145 LEEGRNDWSFEGLQHTRMT-STPRFEVKEGVKGNVFESDTSVLRPSSISKAGFAESRFKN 203
+ +G +D F + + S ++ +E + SD + L + +S K
Sbjct: 1335 INKGDSDLPFAAEKGNKYPESCTQYVREENAQIKESVSDLTCLEVMKAEETCHMKSSDKE 1394
Query: 204 KISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVD 263
++ S+ M+ K I FQTA G+++ VS ++L + N+L D E V D
Sbjct: 1395 QLPSDKMEQN-----MKEFNISFQTASGKNIRVSKESLNKSVNIL-DQETEDL--TVTSD 1446
Query: 264 QLD---LTSFKHRRFDDSSSNKE---NDVFTSFFRLGTAGTKTASKNF 305
L+ L + S K VF F +GT A + +
Sbjct: 1447 SLNSKILCGINKDKMHISCHKKSINIKKVFEEHFPIGTVSQLPALQQY 1494
Score = 62 (26.9 bits), Expect = 3.6e-47, Sum P(6) = 3.6e-47
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 106 EEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEG 148
E HP +GF F T SGK V +S A L +A+ + +G
Sbjct: 1936 EVHPSRT-YGF----FSTASGKAVQVSDASLEKARQVFSEIDG 1973
Score = 60 (26.2 bits), Expect = 5.8e-45, Sum P(4) = 5.8e-45
Identities = 48/194 (24%), Positives = 85/194 (43%)
Query: 36 SSSFRLPSMSDLLLEGHSKLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGT 95
++S + +SD LE ++ + A +++ + G+ K+ S+++ SV+
Sbjct: 1948 TASGKAVQVSDASLEKARQVFSEIDGDAKQLASMVSLEGNEKS----HHSVKRESSVV-- 2001
Query: 96 DNDCGISFAGEEHPRE-NGFGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSF 154
N G+ + P + F FS F T GK V +S + L + K +L EE +
Sbjct: 2002 HNTHGVLSLRKTLPGNVSSFVFSG--FSTAGGKLVTVSESALHKVKGML--EEFDLIRTE 2057
Query: 155 EGLQHTRMTSTPRFEVKEGVKGNVFESDTSVLRPSS-ISKAGFAESRFKN--KISSNMMQ 211
LQH+ TP +V + ES T SS + K +SR + K S +
Sbjct: 2058 HTLQHS---PTPE-DVSKIPPQPCLESRTPEYSVSSKLQKTYNDKSRSPSNYKESGSSGN 2113
Query: 212 TEGLNSAPKPPQIK 225
T+ L +P+ Q++
Sbjct: 2114 TQSLEVSPQLSQME 2127
Score = 59 (25.8 bits), Expect = 8.0e-46, Sum P(5) = 8.0e-46
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGT-DND 98
F T SGKAV + +S+EKA V D D
Sbjct: 1946 FSTASGKAVQVSDASLEKARQVFSEIDGD 1974
Score = 56 (24.8 bits), Expect = 3.6e-47, Sum P(6) = 3.6e-47
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 189 SSISKAGFAESRFKNKISSNMMQ-TEGLNSAPK--PPQIK------FQTAGGRSLSVSSD 239
S +S G +S K S+++ T G+ S K P + F TAGG+ ++VS
Sbjct: 1980 SMVSLEGNEKSHHSVKRESSVVHNTHGVLSLRKTLPGNVSSFVFSGFSTAGGKLVTVSES 2039
Query: 240 ALQYARNLLGDPEL 253
AL + +L + +L
Sbjct: 2040 ALHKVKGMLEEFDL 2053
Score = 54 (24.1 bits), Expect = 3.6e-47, Sum P(6) = 3.6e-47
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 54 KLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDND 98
K+ +N E N+S F+T SGK + + + S+ K++++L + +
Sbjct: 1400 KMEQNMKEF--NIS---FQTASGKNIRVSKESLNKSVNILDQETE 1439
Score = 53 (23.7 bits), Expect = 8.1e-43, Sum P(3) = 8.1e-43
Identities = 41/176 (23%), Positives = 71/176 (40%)
Query: 296 AGTKTASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPSIKK 355
A K+ N L+ + S +SEN + + + + D S +N ++K
Sbjct: 217 ASLKSYFSNHNESLKKNDRFIPSVSDSENKSQQEAFSQGLEKMLGDSSSKINRFRDCLRK 276
Query: 356 PIRST--HGHKAIMDNSVEDDIG-----SKINSLGRSS-GKPLADITNSTSTACANIKQT 407
PI + G A+ D S ED + +L ++ GK I + T T + +
Sbjct: 277 PIPNVLEDGETAV-DTSGEDSFSLCFPKRRTRNLQKTRMGKMKKKIFSETRTD--GLSEE 333
Query: 408 CEKKRLLRSSISPFKRPRISKFSTPLRTN---LSSPNGLSTLSSEQSGCEKKVFSR 460
+ ++S + PR S+ P TN L S +G +SSE C ++S+
Sbjct: 334 ARGQADDKNSFALEIEPRDSEPLDPSVTNQKPLYSQSG--DISSEAGQCSDSIWSQ 387
Score = 52 (23.4 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 20/85 (23%), Positives = 39/85 (45%)
Query: 330 NLIEKFDAVDHDGVSGLN-GKIPSIKKPIRSTHGHKAIMDNSVEDDIGSKINSLGRS-SG 387
+++E F + +G + I S+ +P + ++D E G + SL S SG
Sbjct: 412 SILEDFIDMKKEGTGSITFPHISSLPEP-EKMFSEETLVDKEHE---GQHLESLEDSISG 467
Query: 388 KPLADITNSTSTACANIKQTCEKKR 412
K + T+ T+ +I+++ K R
Sbjct: 468 KQMVSGTSQTACLSPSIRKSIVKMR 492
Score = 51 (23.0 bits), Expect = 3.6e-47, Sum P(6) = 3.6e-47
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 271 KHRRFDDSSSNKENDVFTSFFRLGTAGTKTASKNFTSPLRLFSNPVRSR-INSENINTSA 329
+H SSSN S + K+ +K F P ++ S R +S+N+N
Sbjct: 2327 RHSAVGKSSSNPTVSALRSERTRHSVSDKS-TKVFVPPFKVKSRFHRDEHFDSKNVNLEG 2385
Query: 330 NLIEKFDAVDHDGVSGLNGKIPSIKKPIRST 360
+ D V DG + P K + S+
Sbjct: 2386 KNQKSADGVSEDGN---DSDFPQFNKDLMSS 2413
Score = 50 (22.7 bits), Expect = 3.6e-47, Sum P(6) = 3.6e-47
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 1 MSTWQIFSDADNNFKWQVSGRILQPEPN-GSPIQ 33
M++ ++F + +NNF +QV+ +PN GS ++
Sbjct: 856 MNSEELFPEKENNFAFQVTNE--SNKPNIGSTVE 887
Score = 50 (22.7 bits), Expect = 2.9e-43, Sum P(5) = 2.9e-43
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPE 252
F +A G LSVS++AL+ A L D E
Sbjct: 1204 FCSALGTKLSVSNEALRKAMKLFSDIE 1230
Score = 48 (22.0 bits), Expect = 1.7e-44, Sum P(5) = 1.7e-44
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGD 250
F TA G+++ VS +L+ AR + +
Sbjct: 1946 FSTASGKAVQVSDASLEKARQVFSE 1970
Score = 46 (21.3 bits), Expect = 2.4e-46, Sum P(6) = 2.4e-46
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 71 FKTGSGKAVPLKQSSIEK 88
F T SGK V + Q S++K
Sbjct: 1510 FHTASGKKVKIMQESLDK 1527
Score = 40 (19.1 bits), Expect = 9.7e-46, Sum P(6) = 9.7e-46
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 71 FKTGSGKAVPLKQSSIEKA 89
F+T S K + L + +++K+
Sbjct: 991 FRTASNKEIKLSEDNVKKS 1009
Score = 38 (18.4 bits), Expect = 6.7e-45, Sum P(5) = 6.7e-45
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 67 STP-MFKTGSGKAVPLKQSSIEKALSVL 93
STP MFK S + +PL QS ++ +V+
Sbjct: 76 STPIMFKEQS-QTLPLDQSPFKELGNVV 102
>UNIPROTKB|Q864S8 [details] [associations]
symbol:BRCA2 "Breast cancer type 2 susceptibility protein
homolog" species:9685 "Felis catus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006289
"nucleotide-excision repair" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0030141 "secretory
granule" evidence=ISS] [GO:0033205 "cell cycle cytokinesis"
evidence=ISS] [GO:0033593 "BRCA2-MAGE-D1 complex" evidence=ISS]
[GO:0033600 "negative regulation of mammary gland epithelial cell
proliferation" evidence=ISS] [GO:0043015 "gamma-tubulin binding"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0051298 "centrosome duplication" evidence=ISS]
InterPro:IPR002093 InterPro:IPR015187 InterPro:IPR015252
Pfam:PF00634 Pfam:PF09103 Pfam:PF09169 PROSITE:PS50138
GO:GO:0005634 GO:GO:0005813 GO:GO:0045893 GO:GO:0051298
GO:GO:0030141 GO:GO:0003697 GO:GO:0006302 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0033205
GO:GO:0006289 GO:GO:0043015 CTD:675 EMBL:AB107955
RefSeq:NP_001009858.1 ProteinModelPortal:Q864S8 SMR:Q864S8
GeneID:493878 KEGG:fca:493878 HOVERGEN:HBG050731 GO:GO:0033593
GO:GO:0033600 GO:GO:0007090 InterPro:IPR015525 InterPro:IPR015188
InterPro:IPR015205 PANTHER:PTHR11289 Pfam:PF09104 Pfam:PF09121
PIRSF:PIRSF002397 SUPFAM:SSF81872 Uniprot:Q864S8
Length = 3372
Score = 488 (176.8 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 151/535 (28%), Positives = 240/535 (44%)
Query: 451 SGCEKKVFSRYPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHNADKYMFHDASGL 510
S C K Y Y + + CVK +A+ H QD + + D L
Sbjct: 2477 SACSHKQL--YMYGVSKHCVKIN---SKNAESFQFHTQDYFGKEVQWAKEGIQLADGGWL 2531
Query: 511 -----NCIGAEALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFL 564
G E + L + G S++WV NHY+WI+WKLA E + + A + L
Sbjct: 2532 IPSNDGKAGKEEFYRALCDTPGVDPNLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCL 2591
Query: 565 TVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEA 624
+ VL +LKYRY+ E++ RSAIK+I+E D + +VLCIS + ET
Sbjct: 2592 SPERVLLQLKYRYDMEIDRSKRSAIKKIMERDDTAAKTLVLCISETISSSTDLSETSGSK 2651
Query: 625 QNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSP 684
+G +ELTDGWY++ A LD L + G+L VG K+ I GA L G +P
Sbjct: 2652 TSGVGTKNVGIVELTDGWYAIKAQLDPPLLALVKKGRLTVGHKIIIHGAELAGSPDACTP 2711
Query: 685 LEASGSISLQLNINGTYRAHWADRLGFCKGFGA-PLAFRCIKSNGGPVPRTLVGVTRIYP 743
LEA S+ L+++ N T A W +LGF PL + S+GG V V + R YP
Sbjct: 2712 LEAPESLILKISANSTRPACWYAKLGFFPDPRPFPLPLSSLFSDGGNVGCVDVVIQRTYP 2771
Query: 744 VLYKERLSDGRSIVRSERME----CKVMQLYQHRQSMVVEGIVSEFQRGNKDS------- 792
+ + E+ G I R+ER E K + Q + ++ I +EF++ +++
Sbjct: 2772 IQWMEKTPSGLCIFRNEREEEREATKYAEAQQKKLEVLFNKIQAEFEKHDENITKRCVPL 2831
Query: 793 HILNDSN----SEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERS 848
L +GA+L++ ++ +P + A S EQ+ + ++ L +Q+ ++
Sbjct: 2832 RALTRQQVCALQDGAELYEAVKNAPDPASLEAYFSEEQIRALNNHRQMLNDKKQAQIQLE 2891
Query: 849 IEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQCELVEGQA 908
KA+E+A E+ + P V + +Y GK ++IW P+ L EG+
Sbjct: 2892 FRKAMESAEQGEQ-MLPRDVTTVWKMRIISY-GKKEKDSVTLSIWRPSSDLYSLLTEGKR 2949
Query: 909 YAILGLIPMNSDSNT--LYLQARGSTTKWQPLSPLATEHFKPFFSPRRSVLISNL 961
Y I L S S + ++Q + P + E + PR + + L
Sbjct: 2950 YRIYHLATSQSKSKSERAHIQLTATKKTQYQQLPASDELLFQVYQPREPLYFNKL 3004
Score = 156 (60.0 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 51/189 (26%), Positives = 90/189 (47%)
Query: 801 EGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGLRE 860
+GA+L++ ++ +P + A S EQ+ + ++ L +Q+ ++ KA+E+A E
Sbjct: 2844 DGAELYEAVKNAPDPASLEAYFSEEQIRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGE 2903
Query: 861 ----RDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQCELVEGQAYAILGLIP 916
RDVT ++R++ +Y GK ++IW P+ L EG+ Y I L
Sbjct: 2904 QMLPRDVTTVWKMRII-----SY-GKKEKDSVTLSIWRPSSDLYSLLTEGKRYRIYHLAT 2957
Query: 917 MNSDSNT--LYLQARGST-TKWQPLSPLATEHFKPFFSPRRSVLISNLGEV---PLSSEF 970
S S + ++Q + T++Q L P + E + PR + + L + P SE
Sbjct: 2958 SQSKSKSERAHIQLTATKKTQYQQL-PASDELLFQVYQPREPLYFNKLLDPDFQPPCSEV 3016
Query: 971 DIAAFVVHV 979
D+ FVV V
Sbjct: 3017 DLIGFVVSV 3025
Score = 100 (40.3 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 85/364 (23%), Positives = 148/364 (40%)
Query: 90 LSVLGTDNDCGISFAGEEHPRENGFG-----FS--NSLFQTGSGKTVNISSAGLVRAKSL 142
L V+ + ++ + +EH N G F + FQT SGK + +S A L + +L
Sbjct: 1386 LEVVKAEETLHVNTSNKEHLTANTMGRITKDFDIFDVSFQTASGKNIRVSRASLNKVTNL 1445
Query: 143 LG---LEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNV-FESDTSVLRPSSISKAGFAE 198
L EE N+++ + L ++ ++ K ++ + +L+ + ++
Sbjct: 1446 LDQKCTEEELNNFA-DSLNSELLSG---IDIN---KADISHHGEMEILKKRQMKESDLTG 1498
Query: 199 SRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDALQYARNLLGDPELGTFFH 258
+ K+ + E + +P + F TA G+ + ++ ++L +NL F
Sbjct: 1499 TENKSLTLQQRPEYE-IKKIKEPTILGFHTASGKRIEIAKESLDKVKNL---------FD 1548
Query: 259 EVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRLG--TAGTKTASKN--FTSPLR--LF 312
E + D+ ++T+F HR S +E + RL T ASK PL L
Sbjct: 1549 EQEQDKSEMTNFSHRGTKMSKGREECE---GGLRLACKTIEITPASKEEEMQKPLEKNLV 1605
Query: 313 SNP--VRSRINSENI-NTSANLIEKFDAVDHDGVSGLNGKIPSIKKPIRSTHGHK-AIMD 368
SN V R+ S+N+ + NL A V GK + KKP T+ + +
Sbjct: 1606 SNEIVVVPRLLSDNLYKQTENLKIPNRASLKVKVHENTGK-ETAKKPTTCTNQSTYSATE 1664
Query: 369 NSVEDDI---GSKINSLGRSS----GKPL--ADITNSTSTACANIKQTCEKKRLLRSSIS 419
NS G KI S+ +SS K L ++ + NI + K ++ S I
Sbjct: 1665 NSALSFYTGHGRKI-SVSQSSILEVKKWLRGGELDDQPEKTVYNISEYLPKSKVDNSGIE 1723
Query: 420 PFKR 423
P R
Sbjct: 1724 PVVR 1727
Score = 63 (27.2 bits), Expect = 3.8e-42, Sum P(3) = 3.8e-42
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSS--NKE 283
F +A G L+V S+ALQ A+ L D E + V+VD+ SF + + S S KE
Sbjct: 1215 FYSARGTKLNVCSEALQKAKKLFSDLENISEETSVEVDR----SFSSSKCNGSVSMFKKE 1270
Query: 284 N 284
N
Sbjct: 1271 N 1271
Score = 62 (26.9 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 82 KQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNS--LFQTGSGKTVNISSAGLVRA 139
K+S I L T + C +S G+ R ++N+ +F T SGK V +S A L +A
Sbjct: 1895 KRSEIPPHQINLKTSDICKLS-TGK---RLQSISYTNACGIFSTASGKCVQVSDAALQKA 1950
Query: 140 KSLLGLEE 147
+ + E
Sbjct: 1951 RQVFSKVE 1958
Score = 61 (26.5 bits), Expect = 6.1e-42, Sum P(3) = 6.1e-42
Identities = 32/121 (26%), Positives = 52/121 (42%)
Query: 108 HPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPR 167
H +N + S F T SGK V +S + L + K +L EE + G Q + T R
Sbjct: 1989 HTPQNLLSSAFSGFSTASGKQVPVSESALCKVKGIL--EEFDVMRTECGPQRS---PTSR 2043
Query: 168 FEVKEGVKGNVFESDTSVLRPSS-ISKAGFAESRFKN--KISSNMMQTEGLNSAPKPPQI 224
+V + + E+ T +S + KA E + + KI + + + +P P Q
Sbjct: 2044 QDVSKMPPPSCVENKTPKHSVNSKLEKAYNKEFKLSSNSKIENGSSENHSVQVSPYPSQF 2103
Query: 225 K 225
K
Sbjct: 2104 K 2104
Score = 59 (25.8 bits), Expect = 3.8e-41, Sum P(4) = 3.8e-41
Identities = 26/81 (32%), Positives = 34/81 (41%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRR-FDDSSSNKEN 284
F TA G+ + VS ALQ AR + E + SFKH D + +EN
Sbjct: 1932 FSTASGKCVQVSDAALQKARQVFSKVE------DSAKQPFSKVSFKHNEDHSDKFTREEN 1985
Query: 285 D-VFTSFFRLGTA--GTKTAS 302
+ T L +A G TAS
Sbjct: 1986 TMIHTPQNLLSSAFSGFSTAS 2006
Score = 57 (25.1 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 36/185 (19%), Positives = 68/185 (36%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVN 130
F T SGK + + + S++K ++ F +E + FS+ + G+
Sbjct: 1525 FHTASGKRIEIAKESLDKVKNL----------FDEQEQDKSEMTNFSHRGTKMSKGREE- 1573
Query: 131 ISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFESDTSVLRPSS 190
GL A + + + + + S V + N+++ ++ P+
Sbjct: 1574 -CEGGLRLACKTIEITPASKEEEMQKPLEKNLVSNEIVVVPRLLSDNLYKQTENLKIPNR 1632
Query: 191 IS-KAGFAESRFKNKISSNMMQT-EGLNSAPKPPQIKFQTAGGRSLSVSSDALQYARNLL 248
S K E+ K T + SA + + F T GR +SVS ++ + L
Sbjct: 1633 ASLKVKVHENTGKETAKKPTTCTNQSTYSATENSALSFYTGHGRKISVSQSSILEVKKWL 1692
Query: 249 GDPEL 253
EL
Sbjct: 1693 RGGEL 1697
Score = 52 (23.4 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVL 93
F T SGK VP+ +S++ K +L
Sbjct: 2002 FSTASGKQVPVSESALCKVKGIL 2024
Score = 51 (23.0 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 43 SMSDLLLEGHSKLRENGNEG-ADN---VSTPM--------FKTGSGKAVPLKQSSIEKA 89
S SD+ L+ S ++ NGN DN +S P+ F+T S K + L + +I+K+
Sbjct: 963 SKSDITLD--SDMKSNGNNDYMDNWARLSDPILNHNFGNGFRTASNKEIKLSEHNIKKS 1019
Score = 50 (22.7 bits), Expect = 7.8e-42, Sum P(3) = 7.8e-42
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 70 MFKTGSGKAVPLKQSSIEKALSVLGTDND 98
+F T SGK V + ++++KA V D
Sbjct: 1931 IFSTASGKCVQVSDAALQKARQVFSKVED 1959
Score = 49 (22.3 bits), Expect = 6.1e-41, Sum P(2) = 6.1e-41
Identities = 45/215 (20%), Positives = 85/215 (39%)
Query: 246 NLLGDPELGTFFHEVDVDQLDLTSFKHRRFDD-SSSNKENDVFTSFFRLGTAGTKTASKN 304
N + DP HE L+ S ++ D S+S+ +N + + + T A KN
Sbjct: 513 NNITDPNFKEE-HEASESVLEKHSICSQKEDSLSTSSLDNGSWPATIK----HTSVALKN 567
Query: 305 FTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPS--IKKPIRSTHG 362
+ + + I N TS + K G+ + + + ++ P+ +
Sbjct: 568 -SGLISTLKKKTKKFIYVVNDETSYQGL-KTQKDQQSGLMNYSAQFEANVLEGPLTFANA 625
Query: 363 HKAIMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANI--KQTCEKKRLLRSSISP 420
++ +SV K L S +P+ +TNS T + K + + S
Sbjct: 626 DSGLLHSSV------KKTCLQNDSKEPILSLTNSFGTLLRKVSNKGSSSPNNKIISQDLD 679
Query: 421 FKRPRISKFSTPLRTNLSSP-NGLSTLSSEQSGCE 454
+K +I K L++ +S+ N LS+L ++ CE
Sbjct: 680 YKEAKIKK--EKLQSFISTETNCLSSL--QEKHCE 710
Score = 48 (22.0 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDNDC 99
F+T SGK + + ++S+ K ++L D C
Sbjct: 1424 FQTASGKNIRVSRASLNKVTNLL--DQKC 1450
Score = 45 (20.9 bits), Expect = 1.6e-40, Sum P(4) = 1.6e-40
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 96 DNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLL-GLEE 147
+ND ++A P N F N F+T S K + +S + ++K L +EE
Sbjct: 978 NNDYMDNWARLSDPILN-HNFGNG-FRTASNKEIKLSEHNIKKSKMLFKDIEE 1028
Score = 44 (20.5 bits), Expect = 3.8e-41, Sum P(4) = 3.8e-41
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 140 KSLLGLEEGRNDWSFEGLQHTRMTS-TPRFEVKEGVKGNVFESDTSVLRPSSIS-KAGFA 197
KS G G+N+ F G R T E + K +F ++ +S+ F+
Sbjct: 1198 KSASGHLTGKNEVEFRGFYSARGTKLNVCSEALQKAK-KLFSDLENISEETSVEVDRSFS 1256
Query: 198 ESRFKNKISSNMMQTEGLNSAPK 220
S+ +S M + E N+ K
Sbjct: 1257 SSKCNGSVS--MFKKENCNNEKK 1277
Score = 43 (20.2 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 35/140 (25%), Positives = 60/140 (42%)
Query: 330 NLIEKFDAVDHDGVSGLNGKIPSIKKPIRSTHGHKAIMDNSVEDDIGSKINSLGRSSGKP 389
++ + FD+ + D ++ + SIK+ +R T + D +++ D+ S N+ +
Sbjct: 930 SITKGFDSSNIDDLTEKDRN--SIKQQLRMTLDQDSKSDITLDSDMKSNGNNDYMDNWAR 987
Query: 390 LAD------ITNSTSTAC-ANIK---QTCEKKRLLRSSIS---PFKRPRISKFSTPLRTN 436
L+D N TA IK +K ++L I P I +TPL +
Sbjct: 988 LSDPILNHNFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEERYPTNLACIEIVNTPLESQ 1047
Query: 437 --LSSPNGLSTLS-SEQSGC 453
LS P+ L S + SGC
Sbjct: 1048 EKLSKPHILDPQSINTVSGC 1067
Score = 42 (19.8 bits), Expect = 3.0e-41, Sum P(4) = 3.0e-41
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 226 FQTAGGRSLSVSSDALQYARNLL 248
F TA G+ + VS AL + +L
Sbjct: 2002 FSTASGKQVPVSESALCKVKGIL 2024
Score = 41 (19.5 bits), Expect = 7.7e-41, Sum P(4) = 7.7e-41
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLG-LEEGRNDWSFE 155
F + G +N+ S L +AK L LE + S E
Sbjct: 1215 FYSARGTKLNVCSEALQKAKKLFSDLENISEETSVE 1250
Score = 40 (19.1 bits), Expect = 3.5e-39, Sum P(4) = 3.5e-39
Identities = 17/77 (22%), Positives = 36/77 (46%)
Query: 272 HRRFDDSSSNKENDVFTSFFRLGTAGTKTASKNFTSPLRLFSNPVRSRINSENINT--SA 329
++R ++ +NK D + + A +SKN T + N + I+ +I+ S+
Sbjct: 1308 YKRNIENKANKYTDASRNVYNFREADGSDSSKNDTVYIHKEENGL-PYIDQHDIDLKLSS 1366
Query: 330 NLIEKFDAVDHDGVSGL 346
I++ + +G+S L
Sbjct: 1367 QFIKEGNTQIKEGLSDL 1383
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 547 KLACYERCYLAKSAGKFLTVFNVLE 571
KLAC + KSA LT N +E
Sbjct: 1187 KLACLSKTSCNKSASGHLTGKNEVE 1211
Score = 39 (18.8 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 392 DITNSTSTACANIKQTCEK 410
DITNS +C +K ++
Sbjct: 100 DITNSKHRSCCTMKSKMDQ 118
Score = 39 (18.8 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 414 LRSSISPFKRPRISKFSTPLRTNLSSPNGLSTLSSEQSGCEK 455
+R SI + FS N++ PN + +S EK
Sbjct: 492 IRKSIFRIRESPEETFSAVFSNNITDPNFKEEHEASESVLEK 533
>UNIPROTKB|E1C2I8 [details] [associations]
symbol:BRCA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] InterPro:IPR002093 InterPro:IPR015187
InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103 Pfam:PF09169
PROSITE:PS50138 GO:GO:0005634 GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0007090
InterPro:IPR015525 InterPro:IPR015188 InterPro:IPR015205
PANTHER:PTHR11289 Pfam:PF09104 Pfam:PF09121 PIRSF:PIRSF002397
SUPFAM:SSF81872 GeneTree:ENSGT00390000003602 EMBL:AADN02005245
IPI:IPI00821856 Ensembl:ENSGALT00000036457 Uniprot:E1C2I8
Length = 3175
Score = 489 (177.2 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 159/561 (28%), Positives = 257/561 (45%)
Query: 401 CANIKQTCEKKRLLRSSISPFKRPRISKFSTPLRTNLSSPNGLSTLSSEQSGCEKKVFSR 460
CA Q K+ R +ISP +P S + T +T+ + L T E++
Sbjct: 2435 CARDLQEMRIKKKYRQNISP--QPG-SLYVT--KTSARNRISLKTAVEEETPSFHSTEKL 2489
Query: 461 YPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHN---ADK-YMFHDASGLNCIGAE 516
Y Y + + C++ S Q +++ + + + AD ++ G G +
Sbjct: 2490 YTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGK--AGKK 2547
Query: 517 ALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFLTVFNVLEELKY 575
+ L + G + ++ WV NHY+WIVWKLA E C+ K A + LT VL +LKY
Sbjct: 2548 EFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVCFPHKFANRCLTPETVLLQLKY 2607
Query: 576 RYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEAQNGAENSYAAK 635
RY+ E++ RSAIK+I E D +VLC+S + ++ + N AA
Sbjct: 2608 RYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKV-LSLNTAVSPSNSNNNTEGEKAAAI 2666
Query: 636 LELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSPLEASGSISLQL 695
+E+TDGWY + A LD L L +L VGQK+ + GA L G +PLEA S+ L++
Sbjct: 2667 IEVTDGWYGIRALLDPPLKAFLHRRRLTVGQKIIVHGAELIGSPNGCTPLEAPDSLMLKI 2726
Query: 696 NINGTYRAHWADRLGFCKGFGA-PLAFRCIKSNGGPVPRTLVGVTRIYPVLYKERLSDGR 754
N T A W +LGF + PL + S GG V V V R YP+ + E+ S G
Sbjct: 2727 AANSTRCARWYTKLGFHRDPRPFPLPLSSLYSEGGTVGCIDVVVQRTYPIQWMEKTSAGS 2786
Query: 755 SIVRSERMECKVMQLYQHRQSMVVEG----IVSEFQRGNKD--------SHILNDSN--- 799
+ R+ R E + + Q +E I +EF++ + S I+
Sbjct: 2787 YVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKHEAERNCRRAPRSRIVTRQQIHN 2846
Query: 800 -SEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGL 858
+GA+L++ ++ A+P + +S +QL + ++ + +Q+ + +KA+E+A
Sbjct: 2847 LQDGAELYEAIQNAADPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIREEFKKAVESA-- 2904
Query: 859 RERDVTPFMRVRVVGLTGK----NYQGKGSSREGIITIWNPAEKQQCELV-EGQAYAILG 913
E++ F + R V K +Y+ + R I++IW P C L+ EG Y I
Sbjct: 2905 -EQEKHGFSK-RDVSTVWKLFVIDYRKQEKHRGVILSIWRPL-LDVCSLLKEGSRYRICQ 2961
Query: 914 LIPMNSDSNTLYLQARGSTTK 934
L S + + S TK
Sbjct: 2962 LSTSQSKGRSDSTNVQLSATK 2982
Score = 89 (36.4 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 52/210 (24%), Positives = 82/210 (39%)
Query: 65 NVSTPMFKTGSGKAVPLKQSSIEK---ALSVLGTDNDC--------GISFAGEEHPRENG 113
NV+ P F G+G + A SV G C G ++ ++G
Sbjct: 1866 NVAAPHFINGNGNLIENNHQGANMFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSG 1925
Query: 114 FGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEG 173
+ F T SGK V +S L +A+ L EG + GLQ + +V++
Sbjct: 1926 PSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHS---SGLQDAHLLE----DVEKS 1978
Query: 174 VK-GNVFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGR 232
G VF + +L P E+ +KISS P + F TA G+
Sbjct: 1979 TNHGEVFPREMQLLLPRG------KENASTDKISS--------------PALGFSTASGK 2018
Query: 233 SLSVSSDALQYARNLLGDPELGTFFHEVDV 262
+++S A Q A+ +L + + G E+ V
Sbjct: 2019 QVTISESAYQKAKAILKEAD-GFLSSELGV 2047
Score = 73 (30.8 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 39/144 (27%), Positives = 60/144 (41%)
Query: 49 LEGHSKLRENGNEGADNVSTPMFKTGSGKAVP-LKQSSIEKALSVLGTDNDCGISFAGEE 107
+ G+ L EN ++GA+ MF +VP + E+ +LG F +
Sbjct: 1873 INGNGNLIENNHQGAN-----MF--ADADSVPGFQMQCFEQKSKLLG-------HFPVPD 1918
Query: 108 HPRENGFGFSNSL--FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTST 165
E G S +L F T SGK V +S L +A+ L EG + GLQ +
Sbjct: 1919 KQMEQS-GPSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHS---SGLQDAHLLE- 1973
Query: 166 PRFEVKEGVK-GNVFESDTSVLRP 188
+V++ G VF + +L P
Sbjct: 1974 ---DVEKSTNHGEVFPREMQLLLP 1994
Score = 70 (29.7 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 27/101 (26%), Positives = 44/101 (43%)
Query: 56 RENGNEGADNVSTPM--FKTGSGKAVPLKQSSIEKALSVL-----------GTDND-CGI 101
R N D +S+P F T SGK V + +S+ +KA ++L G N+ C I
Sbjct: 1995 RGKENASTDKISSPALGFSTASGKQVTISESAYQKAKAILKEADGFLSSELGVTNELCEI 2054
Query: 102 SFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSL 142
+G+ G S S + + +++ S + KSL
Sbjct: 2055 KESGQHAEYLTGKVISESKTEKSCSEELDLKSIHPEKMKSL 2095
Score = 59 (25.8 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 35/139 (25%), Positives = 60/139 (43%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFE 180
FQT S K + S + + + K L ++ N++ FE R+ + KE N+F
Sbjct: 973 FQTASNKQIKFSESSIAKGKMLF--KDIENEF-FEASSMERVRNFSNRVQKE----NIFS 1025
Query: 181 SDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGL-NSAPKPPQIKFQTAGGRSLSVSSD 239
SD SK G S + + + + L ++P+ Q+ Q +SL+ S +
Sbjct: 1026 SDLE-------SKTGSTSSGLQTRCMQYIPRKVDLCKNSPRN-QLSVQEPN-QSLTASQE 1076
Query: 240 A-LQYARNLLGDPELGTFF 257
A + N+L E G+ F
Sbjct: 1077 AEIAELSNIL--EETGSQF 1093
Score = 59 (25.8 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 65/276 (23%), Positives = 108/276 (39%)
Query: 70 MFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTV 129
+F T GKAV + +S++ + TD D + S +T SG T
Sbjct: 1793 VFSTAKGKAVSVSESALASIRQMFQTDCDASVK----------------SEIETKSG-TN 1835
Query: 130 NISSAGLVRAKSLLGLEEGRNDWS-FEGLQHTRMT-STPRFEVKEGVKGNVFESDT--SV 185
+ AG S + G ++ F + + M + P F G GN+ E++ +
Sbjct: 1836 QTAIAG----SSSFSIHAGGPGFATFLDTRKSEMNVAAPHFI--NG-NGNLIENNHQGAN 1888
Query: 186 LRPSSISKAGFAESRF--KNKISSN--MMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDAL 241
+ + S GF F K+K+ + + + S P F TA G+ + +S ++L
Sbjct: 1889 MFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSGPSGNLGFFSTASGKPVQLSEESL 1948
Query: 242 QYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRLGTA-GTKT 300
+ AR L + E G+ H + L D S +VF +L G +
Sbjct: 1949 KKARQLFSEME-GS--HSSGLQDAHLLE------DVEKSTNHGEVFPREMQLLLPRGKEN 1999
Query: 301 ASKN-FTSPLRLFSNPVRSRIN-SENINTSANLIEK 334
AS + +SP FS ++ SE+ A I K
Sbjct: 2000 ASTDKISSPALGFSTASGKQVTISESAYQKAKAILK 2035
Score = 56 (24.8 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 29/112 (25%), Positives = 45/112 (40%)
Query: 32 IQPHSSSFRLPSMSDLLLEGHSKLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALS 91
IQ H F ++S L E H E ++ + M + V ++ + +
Sbjct: 1105 IQSHIQQFGATNVSTLKSENHVINDEYCSKLKNENECKMVEYEKEDTVVFHKNKRKVTFT 1164
Query: 92 VLGTDNDCGISFAGEEHPRENGFGFSNSL-FQTGSGKTVNISSAGLVRAKSL 142
L N+ IS + E P FSN + F + GK +NI A L R+ L
Sbjct: 1165 NLDR-NESRIS-SHESCPVPLRDSFSNFVGFTSAGGKKINICKAALTRSAEL 1214
Score = 54 (24.1 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 366 IMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQT 407
IMDNS ++ + +++ SGK + +TS C T
Sbjct: 687 IMDNSSDNSVNNRLKQELSESGKNAREYQPATSFKCLKASHT 728
Score = 48 (22.0 bits), Expect = 4.6e-40, Sum P(3) = 4.6e-40
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 295 TAGTKTASKNFTSPLRL---FSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKI 350
++ T+T++ + S ++L S +S I N+NT L K D +D+ + +N ++
Sbjct: 645 SSATETSTLSHYSKIKLDCLLSAERQSNIKENNLNT---LTIKVDIMDNSSDNSVNNRL 700
Score = 45 (20.9 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 49 LEGHSKLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEK 88
LE K + N + ++S F+T S K + +SSI K
Sbjct: 951 LEHKGKSSGDLNACSSSLSFGGFQTASNKQIKFSESSIAK 990
Score = 44 (20.5 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 236 VSSDALQYARNLLGDPE--LGTF 256
+SS+A Y LLG+PE +G F
Sbjct: 35 LSSEAPPYEPKLLGEPEGPIGWF 57
Score = 43 (20.2 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 179 FESDTSVLRPSSISKAGFAE-SRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVS 237
+E + +V+ + K F R +++ISS+ L + + F +AGG+ +++
Sbjct: 1146 YEKEDTVVFHKNKRKVTFTNLDRNESRISSHESCPVPLRDSFSN-FVGFTSAGGKKINIC 1204
Query: 238 SDALQYARNLLGD 250
AL + L D
Sbjct: 1205 KAALTRSAELFKD 1217
Score = 41 (19.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 23/129 (17%), Positives = 47/129 (36%)
Query: 122 QTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFES 181
Q V+IS + + L ++ G D + T++ E ++ N+F S
Sbjct: 1399 QAADTDAVSISDSSFRSSLRDLNVQCGERDTDVSEKSSKQKTNSVSVEGEDSTYKNLFVS 1458
Query: 182 DTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDAL 241
++ + K G S ++++ S N F TA G+ ++++ L
Sbjct: 1459 ESEI-------KIG---SNQRHQVPSEQEMDVDKNKVKGTYLTGFCTASGKKITIADGFL 1508
Query: 242 QYARNLLGD 250
A +
Sbjct: 1509 AKAEEFFSE 1517
Score = 40 (19.1 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLG---LEEGRND 151
F T SGK + I+ L +A+ ++ G++D
Sbjct: 1493 FCTASGKKITIADGFLAKAEEFFSENNVDLGKDD 1526
Score = 37 (18.1 bits), Expect = 7.5e-40, Sum P(2) = 7.5e-40
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDN-DCG 100
F T SGK + + + KA +N D G
Sbjct: 1493 FCTASGKKITIADGFLAKAEEFFSENNVDLG 1523
>UNIPROTKB|F1N924 [details] [associations]
symbol:BRCA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] InterPro:IPR002093 InterPro:IPR015187
InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103 Pfam:PF09169
PROSITE:PS50138 GO:GO:0005634 GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0007090
InterPro:IPR015525 InterPro:IPR015188 InterPro:IPR015205
PANTHER:PTHR11289 Pfam:PF09104 Pfam:PF09121 PIRSF:PIRSF002397
SUPFAM:SSF81872 GeneTree:ENSGT00390000003602 EMBL:AADN02005245
IPI:IPI00971417 Ensembl:ENSGALT00000036458 Uniprot:F1N924
Length = 3394
Score = 489 (177.2 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 159/560 (28%), Positives = 257/560 (45%)
Query: 401 CANIKQTCEKKRLLRSSISPFKRPRISKFSTPLRTNLSSPNGLSTLSSEQSGCEKKVFSR 460
CA Q K+ R +ISP +P S + T +T+ + L T E++
Sbjct: 2429 CARDLQEMRIKKKYRQNISP--QPG-SLYVT--KTSARNRISLKTAVEEETPSFHSTEKL 2483
Query: 461 YPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHN---ADK-YMFHDASGLNCIGAE 516
Y Y + + C++ S Q +++ + + + AD ++ G G +
Sbjct: 2484 YTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGK--AGKK 2541
Query: 517 ALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFLTVFNVLEELKY 575
+ L + G + ++ WV NHY+WIVWKLA E C+ K A + LT VL +LKY
Sbjct: 2542 EFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVCFPHKFANRCLTPETVLLQLKY 2601
Query: 576 RYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEAQNGAENSYAAK 635
RY+ E++ RSAIK+I E D +VLC+S + ++ + N AA
Sbjct: 2602 RYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKV-LSLNTAVSPSNSNNNTEGEKAAAI 2660
Query: 636 LELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSPLEASGSISLQL 695
+E+TDGWY + A LD L L +L VGQK+ + GA L G +PLEA S+ L++
Sbjct: 2661 IEVTDGWYGIRALLDPPLKAFLHRRRLTVGQKIIVHGAELIGSPNGCTPLEAPDSLMLKI 2720
Query: 696 NINGTYRAHWADRLGFCKGFGA-PLAFRCIKSNGGPVPRTLVGVTRIYPVLYKERLSDGR 754
N T A W +LGF + PL + S GG V V V R YP+ + E+ S G
Sbjct: 2721 AANSTRCARWYTKLGFHRDPRPFPLPLSSLYSEGGTVGCIDVVVQRTYPIQWMEKTSAGS 2780
Query: 755 SIVRSERMECKVMQLYQHRQSMVVEG----IVSEFQRGNKD-------SHILNDSN---- 799
+ R+ R E + + Q +E I +EF++ + S I+
Sbjct: 2781 YVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKHEERNCRRAPRSRIVTRQQIHNL 2840
Query: 800 SEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGLR 859
+GA+L++ ++ A+P + +S +QL + ++ + +Q+ + +KA+E+A
Sbjct: 2841 QDGAELYEAIQNAADPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIREEFKKAVESA--- 2897
Query: 860 ERDVTPFMRVRVVGLTGK----NYQGKGSSREGIITIWNPAEKQQCELV-EGQAYAILGL 914
E++ F + R V K +Y+ + R I++IW P C L+ EG Y I L
Sbjct: 2898 EQEKHGFSK-RDVSTVWKLFVIDYRKQEKHRGVILSIWRPL-LDVCSLLKEGSRYRICQL 2955
Query: 915 IPMNSDSNTLYLQARGSTTK 934
S + + S TK
Sbjct: 2956 STSQSKGRSDSTNVQLSATK 2975
Score = 89 (36.4 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 52/210 (24%), Positives = 82/210 (39%)
Query: 65 NVSTPMFKTGSGKAVPLKQSSIEK---ALSVLGTDNDC--------GISFAGEEHPRENG 113
NV+ P F G+G + A SV G C G ++ ++G
Sbjct: 1871 NVAAPHFINGNGNLIENNHQGANMFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSG 1930
Query: 114 FGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEG 173
+ F T SGK V +S L +A+ L EG + GLQ + +V++
Sbjct: 1931 PSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHS---SGLQDAHLLE----DVEKS 1983
Query: 174 VK-GNVFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGR 232
G VF + +L P E+ +KISS P + F TA G+
Sbjct: 1984 TNHGEVFPREMQLLLPRG------KENASTDKISS--------------PALGFSTASGK 2023
Query: 233 SLSVSSDALQYARNLLGDPELGTFFHEVDV 262
+++S A Q A+ +L + + G E+ V
Sbjct: 2024 QVTISESAYQKAKAILKEAD-GFLSSELGV 2052
Score = 73 (30.8 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 39/144 (27%), Positives = 60/144 (41%)
Query: 49 LEGHSKLRENGNEGADNVSTPMFKTGSGKAVP-LKQSSIEKALSVLGTDNDCGISFAGEE 107
+ G+ L EN ++GA+ MF +VP + E+ +LG F +
Sbjct: 1878 INGNGNLIENNHQGAN-----MF--ADADSVPGFQMQCFEQKSKLLG-------HFPVPD 1923
Query: 108 HPRENGFGFSNSL--FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTST 165
E G S +L F T SGK V +S L +A+ L EG + GLQ +
Sbjct: 1924 KQMEQS-GPSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHS---SGLQDAHLLE- 1978
Query: 166 PRFEVKEGVK-GNVFESDTSVLRP 188
+V++ G VF + +L P
Sbjct: 1979 ---DVEKSTNHGEVFPREMQLLLP 1999
Score = 70 (29.7 bits), Expect = 3.0e-43, Sum P(2) = 3.0e-43
Identities = 27/101 (26%), Positives = 44/101 (43%)
Query: 56 RENGNEGADNVSTPM--FKTGSGKAVPLKQSSIEKALSVL-----------GTDND-CGI 101
R N D +S+P F T SGK V + +S+ +KA ++L G N+ C I
Sbjct: 2000 RGKENASTDKISSPALGFSTASGKQVTISESAYQKAKAILKEADGFLSSELGVTNELCEI 2059
Query: 102 SFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSL 142
+G+ G S S + + +++ S + KSL
Sbjct: 2060 KESGQHAEYLTGKVISESKTEKSCSEELDLKSIHPEKMKSL 2100
Score = 61 (26.5 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 40/175 (22%), Positives = 73/175 (41%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFE 180
FQT S K + S + + + K L ++ N++ FE R+ + KE N+F
Sbjct: 965 FQTASNKQIKFSESSIAKGKMLF--KDIENEF-FEASSMERVRNFSNRVQKE----NIFS 1017
Query: 181 SDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGL-NSAPKPPQIKFQTAGGRSLSVSSD 239
SD SK G S + + + + L ++P+ Q+ Q +SL+ S +
Sbjct: 1018 SDLE-------SKTGSTSSGLQTRCMQYIPRKVDLCKNSPRN-QLSVQEPN-QSLTASQE 1068
Query: 240 A-LQYARNLLGDP----ELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTS 289
A + N+L + E F + ++ Q + F +++S E+ F S
Sbjct: 1069 AEIAELSNILEETGSQFEFTQFRKQSNMIQSHIQQFGATNVENASEAGEDTNFYS 1123
Score = 59 (25.8 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 65/276 (23%), Positives = 108/276 (39%)
Query: 70 MFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTV 129
+F T GKAV + +S++ + TD D + S +T SG T
Sbjct: 1798 VFSTAKGKAVSVSESALASIRQMFQTDCDASVK----------------SEIETKSG-TN 1840
Query: 130 NISSAGLVRAKSLLGLEEGRNDWS-FEGLQHTRMT-STPRFEVKEGVKGNVFESDT--SV 185
+ AG S + G ++ F + + M + P F G GN+ E++ +
Sbjct: 1841 QTAIAG----SSSFSIHAGGPGFATFLDTRKSEMNVAAPHFI--NG-NGNLIENNHQGAN 1893
Query: 186 LRPSSISKAGFAESRF--KNKISSN--MMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDAL 241
+ + S GF F K+K+ + + + S P F TA G+ + +S ++L
Sbjct: 1894 MFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSGPSGNLGFFSTASGKPVQLSEESL 1953
Query: 242 QYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRLGTA-GTKT 300
+ AR L + E G+ H + L D S +VF +L G +
Sbjct: 1954 KKARQLFSEME-GS--HSSGLQDAHLLE------DVEKSTNHGEVFPREMQLLLPRGKEN 2004
Query: 301 ASKN-FTSPLRLFSNPVRSRIN-SENINTSANLIEK 334
AS + +SP FS ++ SE+ A I K
Sbjct: 2005 ASTDKISSPALGFSTASGKQVTISESAYQKAKAILK 2040
Score = 54 (24.1 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 366 IMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQT 407
IMDNS ++ + +++ SGK + +TS C T
Sbjct: 679 IMDNSSDNSVNNRLKQELSESGKNAREYQPATSFKCLKASHT 720
Score = 51 (23.0 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 116 FSNSL-FQTGSGKTVNISSAGLVRAKSL 142
FSN + F + GK +NI A L R+ L
Sbjct: 1192 FSNFVGFTSAGGKKINICKAALTRSAEL 1219
Score = 45 (20.9 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 49 LEGHSKLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEK 88
LE K + N + ++S F+T S K + +SSI K
Sbjct: 943 LEHKGKSSGDLNACSSSLSFGGFQTASNKQIKFSESSIAK 982
Score = 44 (20.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 236 VSSDALQYARNLLGDPE--LGTF 256
+SS+A Y LLG+PE +G F
Sbjct: 35 LSSEAPPYEPKLLGEPEGPIGWF 57
Score = 43 (20.2 bits), Expect = 1.5e-39, Sum P(3) = 1.5e-39
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 179 FESDTSVLRPSSISKAGFAE-SRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVS 237
+E + +V+ + K F R +++ISS+ L + + F +AGG+ +++
Sbjct: 1151 YEKEDTVVFHKNKRKVTFTNLDRNESRISSHESCPVPLRDSFSN-FVGFTSAGGKKINIC 1209
Query: 238 SDALQYARNLLGD 250
AL + L D
Sbjct: 1210 KAALTRSAELFKD 1222
Score = 41 (19.5 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 23/129 (17%), Positives = 47/129 (36%)
Query: 122 QTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFES 181
Q V+IS + + L ++ G D + T++ E ++ N+F S
Sbjct: 1404 QAADTDAVSISDSSFRSSLRDLNVQCGERDTDVSEKSSKQKTNSVSVEGEDSTYKNLFVS 1463
Query: 182 DTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDAL 241
++ + K G S ++++ S N F TA G+ ++++ L
Sbjct: 1464 ESEI-------KIG---SNQRHQVPSEQEMDVDKNKVKGTYLTGFCTASGKKITIADGFL 1513
Query: 242 QYARNLLGD 250
A +
Sbjct: 1514 AKAEEFFSE 1522
Score = 40 (19.1 bits), Expect = 3.2e-39, Sum P(3) = 3.2e-39
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLG---LEEGRND 151
F T SGK + I+ L +A+ ++ G++D
Sbjct: 1498 FCTASGKKITIADGFLAKAEEFFSENNVDLGKDD 1531
Score = 37 (18.1 bits), Expect = 8.9e-40, Sum P(2) = 8.9e-40
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDN-DCG 100
F T SGK + + + KA +N D G
Sbjct: 1498 FCTASGKKITIADGFLAKAEEFFSENNVDLG 1528
>UNIPROTKB|F1P3B2 [details] [associations]
symbol:BRCA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0002020 "protease binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0006978 "DNA damage response, signal transduction
by p53 class mediator resulting in transcription of p21 class
mediator" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0007569 "cell aging" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0010165
"response to X-ray" evidence=IEA] [GO:0010225 "response to UV-C"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010484 "H3 histone acetyltransferase activity"
evidence=IEA] [GO:0010485 "H4 histone acetyltransferase activity"
evidence=IEA] [GO:0030097 "hemopoiesis" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0032465 "regulation of
cytokinesis" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IEA] [GO:0033593 "BRCA2-MAGE-D1 complex" evidence=IEA]
[GO:0033600 "negative regulation of mammary gland epithelial cell
proliferation" evidence=IEA] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IEA] [GO:0043015 "gamma-tubulin binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0051298 "centrosome duplication" evidence=IEA]
InterPro:IPR002093 InterPro:IPR015187 InterPro:IPR015252
Pfam:PF00634 Pfam:PF09103 Pfam:PF09169 PROSITE:PS50138
GO:GO:0005634 GO:GO:0005813 GO:GO:0045893 GO:GO:0042771
GO:GO:0051298 GO:GO:0045931 GO:GO:0008283 GO:GO:0030141
GO:GO:0010332 GO:GO:0003697 GO:GO:0000724 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0033205 GO:GO:0010165
GO:GO:0006289 GO:GO:0010225 GO:GO:0032465 GO:GO:0007569
GO:GO:0048478 GO:GO:0006978 CTD:675 GO:GO:0033593 GO:GO:0033600
GO:GO:0007090 InterPro:IPR015525 InterPro:IPR015188
InterPro:IPR015205 PANTHER:PTHR11289 Pfam:PF09104 Pfam:PF09121
PIRSF:PIRSF002397 SUPFAM:SSF81872 KO:K08775 GO:GO:0010484
GO:GO:0010485 GO:GO:0007141 GeneTree:ENSGT00390000003602
EMBL:AADN02005245 IPI:IPI00572046 RefSeq:NP_989607.2 UniGene:Gga.1
Ensembl:ENSGALT00000027576 GeneID:374139 KEGG:gga:374139
OMA:LITEAWV NextBio:20813654 Uniprot:F1P3B2
Length = 3397
Score = 489 (177.2 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 159/560 (28%), Positives = 257/560 (45%)
Query: 401 CANIKQTCEKKRLLRSSISPFKRPRISKFSTPLRTNLSSPNGLSTLSSEQSGCEKKVFSR 460
CA Q K+ R +ISP +P S + T +T+ + L T E++
Sbjct: 2432 CARDLQEMRIKKKYRQNISP--QPG-SLYVT--KTSARNRISLKTAVEEETPSFHSTEKL 2486
Query: 461 YPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHN---ADK-YMFHDASGLNCIGAE 516
Y Y + + C++ S Q +++ + + + AD ++ G G +
Sbjct: 2487 YTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGK--AGKK 2544
Query: 517 ALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFLTVFNVLEELKY 575
+ L + G + ++ WV NHY+WIVWKLA E C+ K A + LT VL +LKY
Sbjct: 2545 EFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVCFPHKFANRCLTPETVLLQLKY 2604
Query: 576 RYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEAQNGAENSYAAK 635
RY+ E++ RSAIK+I E D +VLC+S + ++ + N AA
Sbjct: 2605 RYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKV-LSLNTAVSPSNSNNNTEGEKAAAI 2663
Query: 636 LELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSPLEASGSISLQL 695
+E+TDGWY + A LD L L +L VGQK+ + GA L G +PLEA S+ L++
Sbjct: 2664 IEVTDGWYGIRALLDPPLKAFLHRRRLTVGQKIIVHGAELIGSPNGCTPLEAPDSLMLKI 2723
Query: 696 NINGTYRAHWADRLGFCKGFGA-PLAFRCIKSNGGPVPRTLVGVTRIYPVLYKERLSDGR 754
N T A W +LGF + PL + S GG V V V R YP+ + E+ S G
Sbjct: 2724 AANSTRCARWYTKLGFHRDPRPFPLPLSSLYSEGGTVGCIDVVVQRTYPIQWMEKTSAGS 2783
Query: 755 SIVRSERMECKVMQLYQHRQSMVVEG----IVSEFQRGNKD-------SHILNDSN---- 799
+ R+ R E + + Q +E I +EF++ + S I+
Sbjct: 2784 YVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKHEERNCRRAPRSRIVTRQQIHNL 2843
Query: 800 SEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGLR 859
+GA+L++ ++ A+P + +S +QL + ++ + +Q+ + +KA+E+A
Sbjct: 2844 QDGAELYEAIQNAADPSYMEGYLSEDQLKALNAHKQLMNDKKQTRIREEFKKAVESA--- 2900
Query: 860 ERDVTPFMRVRVVGLTGK----NYQGKGSSREGIITIWNPAEKQQCELV-EGQAYAILGL 914
E++ F + R V K +Y+ + R I++IW P C L+ EG Y I L
Sbjct: 2901 EQEKHGFSK-RDVSTVWKLFVIDYRKQEKHRGVILSIWRPL-LDVCSLLKEGSRYRICQL 2958
Query: 915 IPMNSDSNTLYLQARGSTTK 934
S + + S TK
Sbjct: 2959 STSQSKGRSDSTNVQLSATK 2978
Score = 89 (36.4 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 52/210 (24%), Positives = 82/210 (39%)
Query: 65 NVSTPMFKTGSGKAVPLKQSSIEK---ALSVLGTDNDC--------GISFAGEEHPRENG 113
NV+ P F G+G + A SV G C G ++ ++G
Sbjct: 1874 NVAAPHFINGNGNLIENNHQGANMFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSG 1933
Query: 114 FGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEG 173
+ F T SGK V +S L +A+ L EG + GLQ + +V++
Sbjct: 1934 PSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHS---SGLQDAHLLE----DVEKS 1986
Query: 174 VK-GNVFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGR 232
G VF + +L P E+ +KISS P + F TA G+
Sbjct: 1987 TNHGEVFPREMQLLLPRG------KENASTDKISS--------------PALGFSTASGK 2026
Query: 233 SLSVSSDALQYARNLLGDPELGTFFHEVDV 262
+++S A Q A+ +L + + G E+ V
Sbjct: 2027 QVTISESAYQKAKAILKEAD-GFLSSELGV 2055
Score = 73 (30.8 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 39/144 (27%), Positives = 60/144 (41%)
Query: 49 LEGHSKLRENGNEGADNVSTPMFKTGSGKAVP-LKQSSIEKALSVLGTDNDCGISFAGEE 107
+ G+ L EN ++GA+ MF +VP + E+ +LG F +
Sbjct: 1881 INGNGNLIENNHQGAN-----MF--ADADSVPGFQMQCFEQKSKLLG-------HFPVPD 1926
Query: 108 HPRENGFGFSNSL--FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTST 165
E G S +L F T SGK V +S L +A+ L EG + GLQ +
Sbjct: 1927 KQMEQS-GPSGNLGFFSTASGKPVQLSEESLKKARQLFSEMEGSHS---SGLQDAHLLE- 1981
Query: 166 PRFEVKEGVK-GNVFESDTSVLRP 188
+V++ G VF + +L P
Sbjct: 1982 ---DVEKSTNHGEVFPREMQLLLP 2002
Score = 70 (29.7 bits), Expect = 3.0e-43, Sum P(2) = 3.0e-43
Identities = 27/101 (26%), Positives = 44/101 (43%)
Query: 56 RENGNEGADNVSTPM--FKTGSGKAVPLKQSSIEKALSVL-----------GTDND-CGI 101
R N D +S+P F T SGK V + +S+ +KA ++L G N+ C I
Sbjct: 2003 RGKENASTDKISSPALGFSTASGKQVTISESAYQKAKAILKEADGFLSSELGVTNELCEI 2062
Query: 102 SFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSL 142
+G+ G S S + + +++ S + KSL
Sbjct: 2063 KESGQHAEYLTGKVISESKTEKSCSEELDLKSIHPEKMKSL 2103
Score = 61 (26.5 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 40/175 (22%), Positives = 73/175 (41%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFE 180
FQT S K + S + + + K L ++ N++ FE R+ + KE N+F
Sbjct: 968 FQTASNKQIKFSESSIAKGKMLF--KDIENEF-FEASSMERVRNFSNRVQKE----NIFS 1020
Query: 181 SDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGL-NSAPKPPQIKFQTAGGRSLSVSSD 239
SD SK G S + + + + L ++P+ Q+ Q +SL+ S +
Sbjct: 1021 SDLE-------SKTGSTSSGLQTRCMQYIPRKVDLCKNSPRN-QLSVQEPN-QSLTASQE 1071
Query: 240 A-LQYARNLLGDP----ELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTS 289
A + N+L + E F + ++ Q + F +++S E+ F S
Sbjct: 1072 AEIAELSNILEETGSQFEFTQFRKQSNMIQSHIQQFGATNVENASEAGEDTNFYS 1126
Score = 59 (25.8 bits), Expect = 3.4e-41, Sum P(3) = 3.4e-41
Identities = 65/276 (23%), Positives = 108/276 (39%)
Query: 70 MFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTV 129
+F T GKAV + +S++ + TD D + S +T SG T
Sbjct: 1801 VFSTAKGKAVSVSESALASIRQMFQTDCDASVK----------------SEIETKSG-TN 1843
Query: 130 NISSAGLVRAKSLLGLEEGRNDWS-FEGLQHTRMT-STPRFEVKEGVKGNVFESDT--SV 185
+ AG S + G ++ F + + M + P F G GN+ E++ +
Sbjct: 1844 QTAIAG----SSSFSIHAGGPGFATFLDTRKSEMNVAAPHFI--NG-NGNLIENNHQGAN 1896
Query: 186 LRPSSISKAGFAESRF--KNKISSN--MMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDAL 241
+ + S GF F K+K+ + + + S P F TA G+ + +S ++L
Sbjct: 1897 MFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSGPSGNLGFFSTASGKPVQLSEESL 1956
Query: 242 QYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRLGTA-GTKT 300
+ AR L + E G+ H + L D S +VF +L G +
Sbjct: 1957 KKARQLFSEME-GS--HSSGLQDAHLLE------DVEKSTNHGEVFPREMQLLLPRGKEN 2007
Query: 301 ASKN-FTSPLRLFSNPVRSRIN-SENINTSANLIEK 334
AS + +SP FS ++ SE+ A I K
Sbjct: 2008 ASTDKISSPALGFSTASGKQVTISESAYQKAKAILK 2043
Score = 54 (24.1 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 366 IMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQT 407
IMDNS ++ + +++ SGK + +TS C T
Sbjct: 682 IMDNSSDNSVNNRLKQELSESGKNAREYQPATSFKCLKASHT 723
Score = 51 (23.0 bits), Expect = 2.3e-40, Sum P(3) = 2.3e-40
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 116 FSNSL-FQTGSGKTVNISSAGLVRAKSL 142
FSN + F + GK +NI A L R+ L
Sbjct: 1195 FSNFVGFTSAGGKKINICKAALTRSAEL 1222
Score = 45 (20.9 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 49 LEGHSKLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEK 88
LE K + N + ++S F+T S K + +SSI K
Sbjct: 946 LEHKGKSSGDLNACSSSLSFGGFQTASNKQIKFSESSIAK 985
Score = 44 (20.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 236 VSSDALQYARNLLGDPE--LGTF 256
+SS+A Y LLG+PE +G F
Sbjct: 35 LSSEAPPYEPKLLGEPEGPIGWF 57
Score = 43 (20.2 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 179 FESDTSVLRPSSISKAGFAE-SRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVS 237
+E + +V+ + K F R +++ISS+ L + + F +AGG+ +++
Sbjct: 1154 YEKEDTVVFHKNKRKVTFTNLDRNESRISSHESCPVPLRDSFSN-FVGFTSAGGKKINIC 1212
Query: 238 SDALQYARNLLGD 250
AL + L D
Sbjct: 1213 KAALTRSAELFKD 1225
Score = 41 (19.5 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 23/129 (17%), Positives = 47/129 (36%)
Query: 122 QTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFES 181
Q V+IS + + L ++ G D + T++ E ++ N+F S
Sbjct: 1407 QAADTDAVSISDSSFRSSLRDLNVQCGERDTDVSEKSSKQKTNSVSVEGEDSTYKNLFVS 1466
Query: 182 DTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDAL 241
++ + K G S ++++ S N F TA G+ ++++ L
Sbjct: 1467 ESEI-------KIG---SNQRHQVPSEQEMDVDKNKVKGTYLTGFCTASGKKITIADGFL 1516
Query: 242 QYARNLLGD 250
A +
Sbjct: 1517 AKAEEFFSE 1525
Score = 40 (19.1 bits), Expect = 3.2e-39, Sum P(3) = 3.2e-39
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLG---LEEGRND 151
F T SGK + I+ L +A+ ++ G++D
Sbjct: 1501 FCTASGKKITIADGFLAKAEEFFSENNVDLGKDD 1534
Score = 37 (18.1 bits), Expect = 8.9e-40, Sum P(2) = 8.9e-40
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDN-DCG 100
F T SGK + + + KA +N D G
Sbjct: 1501 FCTASGKKITIADGFLAKAEEFFSENNVDLG 1531
>UNIPROTKB|Q66MH4 [details] [associations]
symbol:Brca2 "Breast cancer susceptibility protein 2"
species:10116 "Rattus norvegicus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0001556
"oocyte maturation" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0002020 "protease binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0006978 "DNA damage response, signal transduction
by p53 class mediator resulting in transcription of p21 class
mediator" evidence=IEA] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007569 "cell
aging" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010225 "response to UV-C" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0010484 "H3 histone
acetyltransferase activity" evidence=IEA] [GO:0010485 "H4 histone
acetyltransferase activity" evidence=IEA] [GO:0030097 "hemopoiesis"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IEA]
[GO:0032465 "regulation of cytokinesis" evidence=IEA] [GO:0033205
"cell cycle cytokinesis" evidence=IEA] [GO:0033593 "BRCA2-MAGE-D1
complex" evidence=IEA] [GO:0033600 "negative regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0042771
"intrinsic apoptotic signaling pathway in response to DNA damage by
p53 class mediator" evidence=IEA] [GO:0043015 "gamma-tubulin
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0048478
"replication fork protection" evidence=IEA] [GO:0051298 "centrosome
duplication" evidence=IEA] InterPro:IPR002093 InterPro:IPR015187
InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103 Pfam:PF09169
PROSITE:PS50138 RGD:2219 GO:GO:0005634 GO:GO:0005813 GO:GO:0045893
GO:GO:0007420 GO:GO:0042771 GO:GO:0051298 GO:GO:0008585
GO:GO:0045931 GO:GO:0030141 GO:GO:0007283 GO:GO:0010332
GO:GO:0003697 GO:GO:0000724 GO:GO:0030097 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0033205 GO:GO:0001556
GO:GO:0010165 GO:GO:0006289 GO:GO:0010225 GO:GO:0032465
GO:GO:0007569 GO:GO:0048478 GO:GO:0006978 CTD:675
HOVERGEN:HBG050731 GO:GO:0033593 GO:GO:0033600 GO:GO:0007090
InterPro:IPR015525 InterPro:IPR015188 InterPro:IPR015205
PANTHER:PTHR11289 Pfam:PF09104 Pfam:PF09121 PIRSF:PIRSF002397
SUPFAM:SSF81872 KO:K08775 GO:GO:0010484 GO:GO:0010485 GO:GO:0001833
GO:GO:0007141 GeneTree:ENSGT00390000003602 IPI:IPI00366614
UniGene:Rn.103225 NextBio:672749 EMBL:AY691457 EMBL:AY691432
EMBL:AY691433 EMBL:AY691434 EMBL:AY691435 EMBL:AY691436
EMBL:AY691437 EMBL:AY691438 EMBL:AY691439 EMBL:AY691440
EMBL:AY691441 EMBL:AY691442 EMBL:AY691443 EMBL:AY691444
EMBL:AY691445 EMBL:AY691446 EMBL:AY691447 EMBL:AY691448
EMBL:AY691449 EMBL:AY691450 EMBL:AY691451 EMBL:AY691452
EMBL:AY691453 EMBL:AY691454 EMBL:AY691455 EMBL:AY691456
EMBL:AY691484 EMBL:AY691459 EMBL:AY691460 EMBL:AY691461
EMBL:AY691462 EMBL:AY691463 EMBL:AY691464 EMBL:AY691465
EMBL:AY691466 EMBL:AY691467 EMBL:AY691468 EMBL:AY691469
EMBL:AY691470 EMBL:AY691471 EMBL:AY691472 EMBL:AY691473
EMBL:AY691474 EMBL:AY691475 EMBL:AY691476 EMBL:AY691477
EMBL:AY691478 EMBL:AY691479 EMBL:AY691480 EMBL:AY691481
EMBL:AY691482 EMBL:AY691483 RefSeq:NP_113730.2 SMR:Q66MH4
STRING:Q66MH4 Ensembl:ENSRNOT00000001475 GeneID:360254
KEGG:rno:360254 InParanoid:Q66MH4 Genevestigator:Q66MH4
Uniprot:Q66MH4
Length = 3343
Score = 516 (186.7 bits), Expect = 4.2e-45, Sum P(5) = 4.2e-45
Identities = 169/563 (30%), Positives = 263/563 (46%)
Query: 426 ISKFSTPLRTNLSSPNGLSTLSSEQSGCEKKVFSRYPYQIPRMCVKEYFGMPPSAQGML- 484
++K ST R +L + G S S C K Y Y + + C+ Q +
Sbjct: 2442 LTKSSTLPRISLQAAVG----DSVPSACSPKQL--YMYGVSKACISVNSKNAEYFQFAIE 2495
Query: 485 DHL-QDQVRQMKSHN-ADK-YMFHDASGLNCIGAEALFNMLAQS-GASTQYASKLWVSNH 540
DH ++ + K AD ++ G G E + L + G + S +WVSNH
Sbjct: 2496 DHFGKEALCAGKGFRLADGGWLIPSDDGK--AGKEEFYRALCDTPGVDPKLISSVWVSNH 2553
Query: 541 YKWIVWKLACYERCYLAKSAGKFLTVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPS 600
Y+WIVWKLA E + + A + L VL +LKYRY+ E++N RSA+K+ILE D +
Sbjct: 2554 YRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSSRSALKKILERDDTAA 2613
Query: 601 SMMVLCISAIHMNCVPKIETHPEAQNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAG 660
+VLC+S I ET + +++ +ELTDGWY+V A LD L + +G
Sbjct: 2614 KTLVLCVSDIISLSTNVSETSGSKASSEDSNKVDTIELTDGWYAVKAQLDPPLLALVKSG 2673
Query: 661 KLFVGQKLRIWGAILCGWVGPVSPLEASGSISLQLNINGTYRAHWADRLGFCKGFGA-PL 719
+L VGQK+ GA L G +PLEA S+ L+++ N T A W +LGF PL
Sbjct: 2674 RLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSKLGFFHDPRPFPL 2733
Query: 720 AFRCIKSNGGPVPRTLVGVTRIYPVLYKERLSDGRSIVRSERMECKVMQLYQHRQSMVVE 779
+ S+GG V V V R+YP+ + E+ G I R+ER E K + Q +E
Sbjct: 2734 PLSSLFSDGGNVGCVDVIVQRVYPLQWVEKTVSGSYIFRNEREEEKEALRFAEAQQKKLE 2793
Query: 780 GIVS----EFQRGNKD-------SHILNDSN----SEGAKLFKMLETVAEPEVIMAEMSP 824
+ + E + +D S L +GA+L+ ++ ++PE + S
Sbjct: 2794 ALFTKVHTELKEHEEDIAQRRVLSRALTRQQVHALQDGAELYAAVQDASDPEHLETCFSE 2853
Query: 825 EQLTSFATYQAKLEATRQSNMERSIEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGS 884
EQL + Y+ L +Q+ ++ KALE A +E ++ + V L +Y K
Sbjct: 2854 EQLRALNNYRQMLSDKKQARIQSEFRKALE-AAEKEEGLSRDVST-VWKLRVTSY--KKR 2909
Query: 885 SREGIITIWNPAEKQQCELVEGQAYAILGLIPMNSDSN----TLYLQARGSTTKWQPLSP 940
+ +++IW P+ L EGQ Y I L S + ++ L A T++Q L P
Sbjct: 2910 EKSALLSIWRPSSDLPSLLTEGQRYRIYHLSVSKSKNKFEWPSIQLTAT-KRTQYQQL-P 2967
Query: 941 LATEHFKPFFSPRRSVLISNLGE 963
+++E + PR + S L +
Sbjct: 2968 VSSETLLQLYQPRELLPFSKLSD 2990
Score = 68 (29.0 bits), Expect = 4.2e-45, Sum P(5) = 4.2e-45
Identities = 45/207 (21%), Positives = 83/207 (40%)
Query: 81 LKQSSIE-KALSVLGTDNDCGISFAGEEH-PR---ENGFGFSNSLFQTGSGKTVNISSAG 135
+K+S + L V+ + C + + +E P E N FQT SGK + +S
Sbjct: 1367 IKESVSDLTCLEVMKAEETCHMKSSDKEQLPSDKMEQNMKEFNISFQTASGKNIRVSKES 1426
Query: 136 LVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFESDTSVLRPSSISKAG 195
L ++ ++L D E L T + + ++ G+ N + S + S K
Sbjct: 1427 LNKSVNIL-------DQETEDLTVT--SDSLNSKILCGI--NKDKMHISCHKKSINIKKV 1475
Query: 196 FAESRFK----NKISSNMMQTE-GLNSAPKPPQIKFQTAGGRSLSVSSDALQYARNLLGD 250
F E F +++ + E + S +P + F TA G+ + + ++L +NL +
Sbjct: 1476 F-EEHFPIGTVSQLPALQQYPEYEIESIKEPTLLSFHTASGKKVKIMQESLDKVKNLFDE 1534
Query: 251 PEL----GTFFHEVDVDQLDLTSFKHR 273
+ F H+ D +K R
Sbjct: 1535 TQYVRKTTNFGHQESKPLKDREDYKER 1561
Score = 64 (27.6 bits), Expect = 3.1e-44, Sum P(4) = 3.1e-44
Identities = 38/168 (22%), Positives = 66/168 (39%)
Query: 145 LEEGRNDWSFEGLQHTRMT-STPRFEVKEGVKGNVFESDTSVLRPSSISKAGFAESRFKN 203
+ +G +D F + + S ++ +E + SD + L + +S K
Sbjct: 1335 INKGDSDLPFAAEKGNKYPESCTQYVREENAQIKESVSDLTCLEVMKAEETCHMKSSDKE 1394
Query: 204 KISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVD 263
++ S+ M+ K I FQTA G+++ VS ++L + N+L D E V D
Sbjct: 1395 QLPSDKMEQN-----MKEFNISFQTASGKNIRVSKESLNKSVNIL-DQETEDL--TVTSD 1446
Query: 264 QLD---LTSFKHRRFDDSSSNKE---NDVFTSFFRLGTAGTKTASKNF 305
L+ L + S K VF F +GT A + +
Sbjct: 1447 SLNSKILCGINKDKMHISCHKKSINIKKVFEEHFPIGTVSQLPALQQY 1494
Score = 61 (26.5 bits), Expect = 4.5e-45, Sum P(4) = 4.5e-45
Identities = 49/200 (24%), Positives = 74/200 (37%)
Query: 70 MFKTGSGKAVPLKQSSIEKALSVLGT-DNDCG-----ISFAGEEHPRENGFGFSNSLFQT 123
+F T SGKAV + +S+EKA V D D +S G E + S+ + T
Sbjct: 1945 IFSTASGKAVQVSDASLEKARQVFSEIDGDAKQLASMVSLEGNEKSHHSVKRESSVVHNT 2004
Query: 124 GSGKTVNISSAGLVRAKSLLGLEE--GRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFES 181
++ + G V + G G+ E H F++ + + S
Sbjct: 2005 HGVLSLRKTLPGNVSSSVFSGFSTAGGKLVTVSESALHKVKGMLEEFDLIR-TEHTLQHS 2063
Query: 182 DTSVLRPSSISKAG---FAESRFKN-KISSNMMQTEGLNSAPKPPQIKFQTAGG--RSLS 235
T P +SK ESR +SS + +T + + P K + G +SL
Sbjct: 2064 PT----PEDVSKIPPQPCLESRTPEYSVSSKLQKTYN-DKSRSPSNYKESGSSGNTQSLE 2118
Query: 236 VSSDALQYARNLLGDPELGT 255
VS Q R LGT
Sbjct: 2119 VSPQLSQMERKQETQSVLGT 2138
Score = 54 (24.1 bits), Expect = 2.4e-44, Sum P(4) = 2.4e-44
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 54 KLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDND 98
K+ +N E N+S F+T SGK + + + S+ K++++L + +
Sbjct: 1400 KMEQNMKEF--NIS---FQTASGKNIRVSKESLNKSVNILDQETE 1439
Score = 53 (23.7 bits), Expect = 8.1e-43, Sum P(3) = 8.1e-43
Identities = 41/176 (23%), Positives = 71/176 (40%)
Query: 296 AGTKTASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPSIKK 355
A K+ N L+ + S +SEN + + + + D S +N ++K
Sbjct: 217 ASLKSYFSNHNESLKKNDRFIPSVSDSENKSQQEAFSQGLEKMLGDSSSKINRFRDCLRK 276
Query: 356 PIRST--HGHKAIMDNSVEDDIG-----SKINSLGRSS-GKPLADITNSTSTACANIKQT 407
PI + G A+ D S ED + +L ++ GK I + T T + +
Sbjct: 277 PIPNVLEDGETAV-DTSGEDSFSLCFPKRRTRNLQKTRMGKMKKKIFSETRTD--GLSEE 333
Query: 408 CEKKRLLRSSISPFKRPRISKFSTPLRTN---LSSPNGLSTLSSEQSGCEKKVFSR 460
+ ++S + PR S+ P TN L S +G +SSE C ++S+
Sbjct: 334 ARGQADDKNSFALEIEPRDSEPLDPSVTNQKPLYSQSG--DISSEAGQCSDSIWSQ 387
Score = 52 (23.4 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 20/85 (23%), Positives = 39/85 (45%)
Query: 330 NLIEKFDAVDHDGVSGLN-GKIPSIKKPIRSTHGHKAIMDNSVEDDIGSKINSLGRS-SG 387
+++E F + +G + I S+ +P + ++D E G + SL S SG
Sbjct: 412 SILEDFIDMKKEGTGSITFPHISSLPEP-EKMFSEETLVDKEHE---GQHLESLEDSISG 467
Query: 388 KPLADITNSTSTACANIKQTCEKKR 412
K + T+ T+ +I+++ K R
Sbjct: 468 KQMVSGTSQTACLSPSIRKSIVKMR 492
Score = 51 (23.0 bits), Expect = 4.2e-45, Sum P(5) = 4.2e-45
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 271 KHRRFDDSSSNKENDVFTSFFRLGTAGTKTASKNFTSPLRLFSNPVRSR-INSENINTSA 329
+H SSSN S + K+ +K F P ++ S R +S+N+N
Sbjct: 2327 RHSAVGKSSSNPTVSALRSERTRHSVSDKS-TKVFVPPFKVKSRFHRDEHFDSKNVNLEG 2385
Query: 330 NLIEKFDAVDHDGVSGLNGKIPSIKKPIRST 360
+ D V DG + P K + S+
Sbjct: 2386 KNQKSADGVSEDGN---DSDFPQFNKDLMSS 2413
Score = 50 (22.7 bits), Expect = 4.2e-45, Sum P(5) = 4.2e-45
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 1 MSTWQIFSDADNNFKWQVSGRILQPEPN-GSPIQ 33
M++ ++F + +NNF +QV+ +PN GS ++
Sbjct: 856 MNSEELFPEKENNFAFQVTNE--SNKPNIGSTVE 887
Score = 50 (22.7 bits), Expect = 2.9e-43, Sum P(5) = 2.9e-43
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPE 252
F +A G LSVS++AL+ A L D E
Sbjct: 1204 FCSALGTKLSVSNEALRKAMKLFSDIE 1230
Score = 46 (21.3 bits), Expect = 1.6e-43, Sum P(4) = 1.6e-43
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 71 FKTGSGKAVPLKQSSIEK 88
F T SGK V + Q S++K
Sbjct: 1510 FHTASGKKVKIMQESLDK 1527
Score = 40 (19.1 bits), Expect = 4.2e-45, Sum P(5) = 4.2e-45
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 71 FKTGSGKAVPLKQSSIEKA 89
F+T S K + L + +++K+
Sbjct: 991 FRTASNKEIKLSEDNVKKS 1009
Score = 38 (18.4 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 67 STP-MFKTGSGKAVPLKQSSIEKALSVL 93
STP MFK S + +PL QS ++ +V+
Sbjct: 76 STPIMFKEQS-QTLPLDQSPFKELGNVV 102
>UNIPROTKB|E1B8X8 [details] [associations]
symbol:E1B8X8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051298 "centrosome duplication" evidence=IEA]
[GO:0048478 "replication fork protection" evidence=IEA] [GO:0045931
"positive regulation of mitotic cell cycle" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043015 "gamma-tubulin binding" evidence=IEA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA] [GO:0033600
"negative regulation of mammary gland epithelial cell
proliferation" evidence=IEA] [GO:0033593 "BRCA2-MAGE-D1 complex"
evidence=IEA] [GO:0033205 "cell cycle cytokinesis" evidence=IEA]
[GO:0032465 "regulation of cytokinesis" evidence=IEA] [GO:0030141
"secretory granule" evidence=IEA] [GO:0030097 "hemopoiesis"
evidence=IEA] [GO:0010485 "H4 histone acetyltransferase activity"
evidence=IEA] [GO:0010484 "H3 histone acetyltransferase activity"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0008585 "female
gonad development" evidence=IEA] [GO:0007569 "cell aging"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0006978 "DNA damage response, signal
transduction by p53 class mediator resulting in transcription of
p21 class mediator" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IEA] [GO:0002020 "protease binding"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA] InterPro:IPR002093
InterPro:IPR015187 InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103
Pfam:PF09169 PROSITE:PS50138 GO:GO:0005634 GO:GO:0005813
GO:GO:0045893 GO:GO:0007420 GO:GO:0042771 GO:GO:0051298
GO:GO:0008585 GO:GO:0045931 GO:GO:0030141 GO:GO:0007283
GO:GO:0010332 GO:GO:0003697 GO:GO:0000724 GO:GO:0030097
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0033205
GO:GO:0001556 GO:GO:0010165 GO:GO:0006289 GO:GO:0010225
GO:GO:0032465 GO:GO:0007569 GO:GO:0048478 GO:GO:0006978
GO:GO:0033593 GO:GO:0033600 GO:GO:0007090 InterPro:IPR015525
InterPro:IPR015188 InterPro:IPR015205 PANTHER:PTHR11289
Pfam:PF09104 Pfam:PF09121 PIRSF:PIRSF002397 SUPFAM:SSF81872
GO:GO:0010484 GO:GO:0010485 GO:GO:0001833 GO:GO:0007141
GeneTree:ENSGT00390000003602 OMA:LGFHTAS EMBL:DAAA02033078
IPI:IPI00718268 Ensembl:ENSBTAT00000001311 Uniprot:E1B8X8
Length = 3357
Score = 507 (183.5 bits), Expect = 9.5e-45, Sum P(3) = 9.5e-45
Identities = 159/544 (29%), Positives = 244/544 (44%)
Query: 451 SGCEKKVFSRYPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHNADKYMFHDASGL 510
S C K Y Y + + CVK +A+ H QD + D L
Sbjct: 2477 SACSHKQL--YMYGVSKHCVKIN---SKNAEAFQFHTQDYFGKESLWTGKGIQLADGGWL 2531
Query: 511 -----NCIGAEALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFL 564
G E + L + G + S++WV NHY+WI+WKLA E + K A + L
Sbjct: 2532 IPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKKFANRCL 2591
Query: 565 TVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEA 624
VL +LKYRY+ E++ RSAIK+I+E D + +VLC+S I E
Sbjct: 2592 NPERVLLQLKYRYDVEIDRSKRSAIKKIMERDDTAAKTLVLCVSEIISLSTDISEPSSNK 2651
Query: 625 QNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSP 684
+ + + A ++LTDGWY++ A +D LS L G+L VGQK+ I GA L G +P
Sbjct: 2652 TSSVDTTKVAVVQLTDGWYAIKAQVDPPLSALLKNGRLTVGQKIVIHGAELVGSPDACTP 2711
Query: 685 LEASGSISLQLNINGTYRAHWADRLGFCKG-FGAPLAFRCIKSNGGPVPRTLVGVTRIYP 743
LEA S+ L+++ N T A W +LGF PL + S+GG V + + R YP
Sbjct: 2712 LEAPESLMLKISANSTRPACWYAKLGFSPDPRPLPLPLSSLFSDGGNVGCVDIIIQRAYP 2771
Query: 744 VLYKERLSDGRSIVRSERMECKVMQLYQHRQSMVVEGIVSEFQRGNKD-----------S 792
+ + E+ S G I R+ER E K Y Q +E + ++ Q +D S
Sbjct: 2772 IQWMEKTSTGLYIFRNEREEEKEATKYAEAQQKKLEALFTKIQAEFEDHEENVTEQCIPS 2831
Query: 793 HILNDSN----SEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERS 848
L +GA+L++ ++ +P + S EQL + ++ L +Q+ ++
Sbjct: 2832 RALTRQQVRALQDGAELYEAVKNAPDPSYLEGYFSEEQLRALNNHRQMLNDKKQAQIQVE 2891
Query: 849 IEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQCELVEGQA 908
+ KA+E+A E+ + P V L +Y+ K I+ IW P+ + L EG+
Sbjct: 2892 LRKAMESAEQGEQ-ILPRDVTPVWKLRIMSYKRKEKDSV-ILNIWRPSSELYSLLTEGKR 2949
Query: 909 YAILGLIPMNSDSNTLYLQARGSTTKWQPLS--PLATEHFKPFFSPRRSVLISNLGEVPL 966
Y I L S S + + TK P + E + PR + + L L
Sbjct: 2950 YRIYHLTASKSKSKYERANIQLTATKKTQYQQLPASDEILLQIYQPREPLHFNKL----L 3005
Query: 967 SSEF 970
S+F
Sbjct: 3006 DSDF 3009
Score = 160 (61.4 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 60/231 (25%), Positives = 101/231 (43%)
Query: 760 ERMECKVMQLYQHRQSMVVEGIVSEFQRGNKDSHILNDSNSEGAKLFKMLETVAEPEVIM 819
E + K+ ++ + V E + + L D GA+L++ ++ +P +
Sbjct: 2807 EALFTKIQAEFEDHEENVTEQCIPSRALTRQQVRALQD----GAELYEAVKNAPDPSYLE 2862
Query: 820 AEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGLRE----RDVTPFMRVRVVGLT 875
S EQL + ++ L +Q+ ++ + KA+E+A E RDVTP ++R++
Sbjct: 2863 GYFSEEQLRALNNHRQMLNDKKQAQIQVELRKAMESAEQGEQILPRDVTPVWKLRIMSYK 2922
Query: 876 GKNYQGKGSSREGIITIWNPAEKQQCELVEGQAYAILGLIPMNSDSN----TLYLQARGS 931
K K S I+ IW P+ + L EG+ Y I L S S + L A
Sbjct: 2923 RKE---KDSV---ILNIWRPSSELYSLLTEGKRYRIYHLTASKSKSKYERANIQLTAT-K 2975
Query: 932 TTKWQPLSPLATEHFKPFFSPRRSVLISNLGEV---PLSSEFDIAAFVVHV 979
T++Q L P + E + PR + + L + P SE D+ FVV V
Sbjct: 2976 KTQYQQL-PASDEILLQIYQPREPLHFNKLLDSDFQPPCSEVDLIGFVVSV 3025
Score = 71 (30.1 bits), Expect = 6.5e-44, Sum P(3) = 6.5e-44
Identities = 61/300 (20%), Positives = 117/300 (39%)
Query: 79 VPLKQSSIE-KALSVLGTDNDCGISFAGE---EHPREN--GFGFSNSLFQTGSGKTVNIS 132
+P+K+S + L V+ + S E R+N FG + F T +GK + +S
Sbjct: 1342 IPIKESLSDLTCLEVMKAEETFNKSNKKEPIANKMRQNIKDFGVFDLSFWTANGKNIRVS 1401
Query: 133 SAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFE----SDTSVLRP 188
L + + D + + + E+ G+ N + +TS+ +
Sbjct: 1402 KESLNKVVNFF-------DEKCTEKELNNFSDSSNSELLSGININKIDISSHEETSMFKN 1454
Query: 189 SSISKAGFAESRFKNKISSNMMQTEG--LNSAPKPPQIKFQTAGGRSLSVSSDALQYARN 246
+ ++ + + +N+I + + Q E +P + F TA G+ ++ ++L +N
Sbjct: 1455 KMLQES--SPAGIENQILT-LQQREKCEFKKIKEPTTLGFHTASGKKAKIAKESLDKVKN 1511
Query: 247 LLGDPELGTFFHEVDVDQLDLTSFKH---RRFDDSSSNKEN-DVFTSFFRLGTAGT---- 298
L F E D ++T F H + D KE D+ + GTA
Sbjct: 1512 L---------FDETKQDNSEVTDFIHQGAKMLMDREVCKEGLDLACEIVK-GTAPKHEEM 1561
Query: 299 -------KTASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIP 351
K S+ P R S+ ++ + +EN++TS ++ K H+ + K P
Sbjct: 1562 QNSLEEKKLVSEETAMPPRFLSDHLQGQ--TENLHTSHSVSLKVKV--HENMEEETAKSP 1617
Score = 70 (29.7 bits), Expect = 9.5e-45, Sum P(3) = 9.5e-45
Identities = 32/120 (26%), Positives = 54/120 (45%)
Query: 6 IFSDADNNFKWQVSGRILQPEPNGSPIQPHSSSFRLPSMSDLLLEGHSKLRENG----NE 61
IF ++ +N + + + P+ PI S L +S++ L H L+ + N
Sbjct: 1883 IFPNSPDNEEHNMHSHDVSPDIQSEPILHDQSISGLEKVSEIPLR-HVDLKTSDRCKFNM 1941
Query: 62 GAD--NVSTP----MFKTGSGKAVPLKQSSIEKALSVLGTDNDCG------ISF-AGEEH 108
G +VS+ +F T SGK+V + S+++KA V D +SF + EEH
Sbjct: 1942 GKHPRSVSSMNACGIFNTASGKSVQVSDSALQKARQVFSKSEDSAKQFFSRVSFKSNEEH 2001
Score = 66 (28.3 bits), Expect = 2.8e-44, Sum P(4) = 2.8e-44
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGT--FFHEVDVDQLDLTSFKHRRFDDSSS-NK 282
F TA G+S+ VS ALQ AR + E FF V + S R +++ + N
Sbjct: 1957 FNTASGKSVQVSDSALQKARQVFSKSEDSAKQFFSRVSFKSNEEHSDIFTRKENTMTHNP 2016
Query: 283 ENDVFTSFFRLGTAGTK 299
N + ++F TA K
Sbjct: 2017 PNLLSSAFSGFSTASGK 2033
Score = 66 (28.3 bits), Expect = 2.4e-43, Sum P(4) = 2.4e-43
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 93 LGTDNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEE 147
L T + C + +HPR + +F T SGK+V +S + L +A+ + E
Sbjct: 1931 LKTSDRCKFNMG--KHPRSVSSMNACGIFNTASGKSVQVSDSALQKARQVFSKSE 1983
Score = 66 (28.3 bits), Expect = 2.7e-43, Sum P(3) = 2.7e-43
Identities = 40/153 (26%), Positives = 69/153 (45%)
Query: 255 TFFHEVDVDQLDLTSFK--HRRFDDSSSNKEND-VF--TSFFRLGTAGT-KTASKNFTSP 308
T H+ D ++ L S + + ++ S + EN+ +F TS + G K + S
Sbjct: 815 TVIHK-DQEETTLISKRTVNPNSEELSPDSENNYIFQTTSERNIPILGNIKEVHEADLSC 873
Query: 309 LR--LFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIP-SIKKPIRSTHGHKA 365
LR + N VR + +A + D+V + V GL K S+K+ + T G +
Sbjct: 874 LREPVLKNSVRVTSTDMDGGQAAKVSITKDSVSSNTVHGLIEKNRNSVKQQSKMTLGQDS 933
Query: 366 IMDNSVEDDIGSKINSLGRSSGKPLADITNSTS 398
D S++ D S N+ + L+D+T+S S
Sbjct: 934 KPDVSLDTDTKSNRNNFCKDKWAGLSDLTSSHS 966
Score = 62 (26.9 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 31/129 (24%), Positives = 55/129 (42%)
Query: 217 SAPKPPQIKFQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRF- 275
SA + + F T GR +SVS +L A+ L + EL +++ ++ R +
Sbjct: 1628 SAIENSALAFYTGHGRKISVSQASLLEAKKWLREGELNDQPEKINSSKIICLKEYTRDYV 1687
Query: 276 -DDSSSNKENDVFTSFFRLGTAGTKTASKNFTSPLRLFSNPVRSRINSENINTSANLIEK 334
+ S N N + + L T+ N + P +S +SE N S NL +
Sbjct: 1688 GNPSCGNSSNSITENDKSLSEKQDSTSLNN-SMP-NSYSYHSDFCHSSEGFNKSENLSK- 1744
Query: 335 FDAVDHDGV 343
+ +D+ G+
Sbjct: 1745 -NKIDNSGI 1752
Score = 60 (26.2 bits), Expect = 2.2e-43, Sum P(3) = 2.2e-43
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKEN 284
F +A G L+VS++ALQ A L D E + +VD +S + D S EN
Sbjct: 1184 FYSARGTKLNVSTEALQKAMKLFSDIEKVSEKTPAEVDPGSFSSNQCNNSDVSMFKVEN 1242
Score = 56 (24.8 bits), Expect = 2.8e-44, Sum P(4) = 2.8e-44
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLGLEEGR-ND 151
F TG G+ +++S A L+ AK L EG ND
Sbjct: 1637 FYTGHGRKISVSQASLLEAKKWL--REGELND 1666
Score = 49 (22.3 bits), Expect = 9.5e-45, Sum P(3) = 9.5e-45
Identities = 36/148 (24%), Positives = 59/148 (39%)
Query: 108 HPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPR 167
H N + S F T SGK V +S + L + K + EE + LQH+ T R
Sbjct: 2014 HNPPNLLSSAFSGFSTASGKHVPVSESALCKVKGMF--EEFDLIGTEYSLQHS---PTSR 2068
Query: 168 FEVKEGVKGNVFESDTSVLRPSS-ISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKF 226
+V + + + + T SS + KA E + N + +E N + K
Sbjct: 2069 QDVSKILPVSCTDKRTPEHSVSSKMEKAYNKEFKLSNNYNIESGSSEN-NHSIKVSSYLS 2127
Query: 227 QTAGGRSLSVSSDALQYARN--LLGDPE 252
+ + SV + + N LLG+ +
Sbjct: 2128 EFKQDQQQSVLGTRVSHTDNIHLLGEKQ 2155
Score = 48 (22.0 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHP 109
F T SGK VP+ +S++ K + + G ++ + P
Sbjct: 2027 FSTASGKHVPVSESALCKVKGMFEEFDLIGTEYSLQHSP 2065
Score = 47 (21.6 bits), Expect = 2.4e-43, Sum P(4) = 2.4e-43
Identities = 29/118 (24%), Positives = 50/118 (42%)
Query: 192 SKAGFAESRFK-NKISSNMMQTEGLNSAPKPPQIK------FQTAGGRSLSVSSDALQYA 244
+K F+ FK N+ S++ + PP + F TA G+ + VS AL
Sbjct: 1986 AKQFFSRVSFKSNEEHSDIFTRKENTMTHNPPNLLSSAFSGFSTASGKHVPVSESALCKV 2045
Query: 245 RNLLGDPEL-GTFF---HEV----DVDQLDLTSFKHRRFDDSS-SNKENDVFTSFFRL 293
+ + + +L GT + H DV ++ S +R + S S+K + F+L
Sbjct: 2046 KGMFEEFDLIGTEYSLQHSPTSRQDVSKILPVSCTDKRTPEHSVSSKMEKAYNKEFKL 2103
Score = 46 (21.3 bits), Expect = 5.1e-44, Sum P(3) = 5.1e-44
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 96 DNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLL-GLEE 147
+N C +AG + F N F+T S K + +S + ++K L +EE
Sbjct: 948 NNFCKDKWAGLSD-LTSSHSFGNG-FRTASNKEIKLSEHNIKKSKMLFKDIEE 998
Score = 42 (19.8 bits), Expect = 2.8e-44, Sum P(4) = 2.8e-44
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 53 SKLRENGNE-GADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDNDC 99
+K+R+N + G ++S F T +GK + + + S+ K ++ D C
Sbjct: 1374 NKMRQNIKDFGVFDLS---FWTANGKNIRVSKESLNKVVNFF--DEKC 1416
Score = 40 (19.1 bits), Expect = 4.5e-44, Sum P(4) = 4.5e-44
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 71 FKTGSGKAVPLKQSSIEKA 89
F+T S K + L + +I+K+
Sbjct: 971 FRTASNKEIKLSEHNIKKS 989
Score = 39 (18.8 bits), Expect = 2.7e-43, Sum P(3) = 2.7e-43
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 158 QHTRMT-STPRFEVKEGVKGNVFESDTSVLRPSSISK 193
Q + +T S+ +FE K + F + S PSSI K
Sbjct: 567 QESELTNSSAQFEAKPLEAPHTFTNVDSGSLPSSIQK 603
Score = 39 (18.8 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVL--GTDND 98
F TG G+ + + Q+S+ +A L G ND
Sbjct: 1637 FYTGHGRKISVSQASLLEAKKWLREGELND 1666
Score = 39 (18.8 bits), Expect = 1.6e-42, Sum P(4) = 1.6e-42
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 156 GLQHTRMTST-PRFEVKEGVKGNV 178
G + TST PR ++E V+G +
Sbjct: 2452 GSLYLAKTSTMPRIPLREAVEGRI 2475
Score = 38 (18.4 bits), Expect = 7.3e-44, Sum P(4) = 7.3e-44
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 71 FKTGSGKAVPLKQSSIEK 88
F T SGK + + S++K
Sbjct: 1491 FHTASGKKAKIAKESLDK 1508
>ZFIN|ZDB-GENE-060510-3 [details] [associations]
symbol:brca2 "breast cancer 2, early onset"
species:7955 "Danio rerio" [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007090 "regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008585 "female gonad development" evidence=IMP] [GO:0007530
"sex determination" evidence=IMP] InterPro:IPR002093
InterPro:IPR015187 InterPro:IPR015252 Pfam:PF00634 Pfam:PF09103
Pfam:PF09169 PROSITE:PS50138 ZFIN:ZDB-GENE-060510-3 GO:GO:0005634
GO:GO:0008585 GO:GO:0007283 GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 CTD:675
GO:GO:0007090 InterPro:IPR015525 InterPro:IPR015188
InterPro:IPR015205 PANTHER:PTHR11289 Pfam:PF09104 Pfam:PF09121
PIRSF:PIRSF002397 SUPFAM:SSF81872 KO:K08775
GeneTree:ENSGT00390000003602 GO:GO:0007530 EMBL:CR536612
EMBL:CR628361 IPI:IPI00877471 RefSeq:NP_001103864.2
UniGene:Dr.108077 Ensembl:ENSDART00000111472 GeneID:566758
KEGG:dre:566758 OMA:VFAGCDE NextBio:20888361 ArrayExpress:F1R8E8
Bgee:F1R8E8 Uniprot:F1R8E8
Length = 2874
Score = 435 (158.2 bits), Expect = 1.6e-42, Sum P(4) = 1.6e-42
Identities = 138/489 (28%), Positives = 230/489 (47%)
Query: 502 YMFHDASGLNCIGAEALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSA 560
++ D+ G +G E F+ L + G + S +WV NHY+WI+WK A ER +
Sbjct: 2131 WLVPDSKGT--VGKEEFFSALCDTPGVDPKLISDVWVFNHYRWIIWKRASMERTFPNLIG 2188
Query: 561 GKFLTVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIET 620
G LT VL +LK+RY+ EV++ RSA++RI+E D P+ +VLC+ I C +T
Sbjct: 2189 GLCLTPEQVLLQLKFRYDVEVDHSQRSALRRIMERDDTPAKTLVLCVCGIVQTCQNPEKT 2248
Query: 621 HPEAQNGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVG 680
+ ++ + + + LTDGWYS+ + LD LS L G+L +G K+ GA L G
Sbjct: 2249 MKDDKSPSAKMESCVIWLTDGWYSIKSLLDPPLSAMLNKGRLKIGDKIVTSGAELVGSQE 2308
Query: 681 PVSPLEASGSISLQLNINGTYRAHWADRLGFCKGFGAP--LAFRCIKSNGGPVPRTLVGV 738
PLEA S+ L+++ N T RA W +LG+ + P L + ++GG V + V
Sbjct: 2309 ACPPLEAPESLMLKISANSTRRARWDTKLGYYRD-PRPIRLLLSSLYASGGLVSCVNLLV 2367
Query: 739 TRIYPVLYKERLSDGRSIVRSERMECKVMQLY---QHRQ-SMVVEGIVSEFQR---GNKD 791
R YP + E+ + I R++R E + + + +H+ +++ I ++F++ G K
Sbjct: 2368 LRSYPTQWMEKKPNSVFIFRNDRAEDREARKHSNSKHKSLDLLISKIQTQFEKEMEGKKK 2427
Query: 792 SHILNDSNS--------EGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQS 843
+ S +G +L++ +E A E +S +Q+ + + Y+ E RQ+
Sbjct: 2428 KRAQRRTFSRHEIETLQDGDELYEAMEQDAAVET---RLSHKQMEAVSKYRCCREEKRQA 2484
Query: 844 NMERSIEKALENAGLRERDVTPFMRVRVVG-LTGKNYQGKGSSREGIITIWNPAEKQQCE 902
++ ++KA+ A E P V V L+ + S+ + IW P + Q
Sbjct: 2485 ELQERVQKAVMEAQEAEGGC-PNRDVTPVWKLSVIDASDMQSNCVYTLNIWRPTRELQGL 2543
Query: 903 LVEGQAYAILGLIPMNSD--SNTLYLQARGST-TKWQPLSPLATEHFKPFFSPRRSVLIS 959
L EG Y L S ++Q + T +Q + ++ E F R V
Sbjct: 2544 LTEGHRYRAYHLASSEGKKRSGVAHIQLTATKKTLFQDIE-VSPEWLHQHFRARECVRFR 2602
Query: 960 NLGEVPLSS 968
L SS
Sbjct: 2603 ELQNPHFSS 2611
Score = 93 (37.8 bits), Expect = 4.2e-42, Sum P(4) = 4.2e-42
Identities = 48/178 (26%), Positives = 81/178 (45%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTP-RFEVKEGVKGNVF 179
FQT SGK V++ + L +AK++ D + + LQ T M + +V+ + N
Sbjct: 1136 FQTASGKGVSVLPSALKKAKAIFK----DCDSNIDNLQSTNMEERKTKLDVEIVKQTNAL 1191
Query: 180 ESDTSVLRPSSIS--KAGFA-----ESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGR 232
S++ + S + K E+ K +Q+E N F TA G+
Sbjct: 1192 ISNSKSVTFSDVEEFKTDLINNLDQEAPQKEVCELKGLQSEFSNLISSNGNCGFSTASGK 1251
Query: 233 SLSVSSDALQYARNLLGDPELG----TFFHEVD--VD-QLDLTSF-KHRRFDDSSSNK 282
+SVS++ALQ A+++L + G + + + VD QLD +S KH+ F + K
Sbjct: 1252 KVSVSAEALQRAKDVLFESVDGFSCANVYKKTNQVVDIQLDSSSSGKHKGFCTAGGKK 1309
Score = 84 (34.6 bits), Expect = 1.6e-42, Sum P(4) = 1.6e-42
Identities = 38/118 (32%), Positives = 51/118 (43%)
Query: 224 IKFQTAGGRSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKE 283
I F TAGG+ +++SS ALQ A+ L D E E + L SF R D N +
Sbjct: 1622 IGFSTAGGKKVTISSTALQRAQTLFKDCEEEKEVFESEKAPLPTKSFHARSEDIVDGNLK 1681
Query: 284 NDVFTSFF-RLGTAGTKTASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDH 340
D RL TA K S S L S R +++N T L+ + D+ H
Sbjct: 1682 FDQTNKKNPRLSTASGKVVSVTKVS-LEETSTFFRE-FDNQNTATDNQLLLR-DSSKH 1736
Score = 83 (34.3 bits), Expect = 1.6e-42, Sum P(4) = 1.6e-42
Identities = 51/189 (26%), Positives = 79/189 (41%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGE--------EHPRENGFGFSNSLFQ 122
F T SGK V + ++++A VL D G S A + ++ + F
Sbjct: 1245 FSTASGKKVSVSAEALQRAKDVLFESVD-GFSCANVYKKTNQVVDIQLDSSSSGKHKGFC 1303
Query: 123 TGSGKTVNISSAGLVRAKSLL-GLEEGR--NDWSFEGLQHTRMTSTPRFEV--KEG-VKG 176
T GK V S+ GL +AK+L G EE + + +GL + M + + + G G
Sbjct: 1304 TAGGKKVAFSATGLQKAKNLFRGCEEESLTTEQNCKGLSNVLMLACNGVSLIPEPGNSSG 1363
Query: 177 NVFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSV 236
N T+ R IS ++ N + + + E L S Q F TA G+++ V
Sbjct: 1364 NNVGFSTAGGRKMDISVTALQKA---NNLFKDC-EEESLASRSLAHQ-GFTTASGKNVFV 1418
Query: 237 SSDALQYAR 245
S AL R
Sbjct: 1419 SEKALSEVR 1427
Score = 83 (34.3 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 61/237 (25%), Positives = 99/237 (41%)
Query: 80 PLKQSSIEKALSVLGTDNDCGISFAGEEHPREN--GFGFSNSLFQTGSGKTVNISSAGLV 137
P K +SI + D+ C +F+ + + G F+T + K + I + +V
Sbjct: 552 PNKSTSI--TTFEISHDSGCPTTFSDLDRTTASFADIGEYFPTFKTANNKFICIPTEAIV 609
Query: 138 RAKSLLGLEEGRNDWSFEGLQHTRMTSTPR-FEVKEGVKGNVFESDTSVLRP--SSISK- 193
+AK+ L+E D GL T + P+ F V E + +V S + P SI
Sbjct: 610 KAKA--SLDEAAGD----GLAKTSNQTKPKHFHVTETMCKSVSRSIPAPRPPVGQSIPSN 663
Query: 194 --AGFAESRFKNKISSNMMQTEGLN-SAPKPPQIKFQTAGGRSLSVSSDALQ---YARNL 247
+G + S S + N S P+ + +T+ ++VS LQ +
Sbjct: 664 HASGVSVSDASKTDSPKGFKMNFSNCSLPQSDESDCKTSSKTIITVSDAGLQTESLLKEK 723
Query: 248 LG-DPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRLGTAGTKTASK 303
LG E H+ VD + ++ +H FD SS+ K V +S L GT TAS+
Sbjct: 724 LGRSSESSKPIHQ-KVD-FERSAERHAVFDISSTQKPTAVDSSCDDLEENGTLTASQ 778
Score = 83 (34.3 bits), Expect = 2.6e-38, Sum P(3) = 2.6e-38
Identities = 38/127 (29%), Positives = 60/127 (47%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVL-GTDNDCGISFAGEEHPRENGFGFSNSLFQTGSGKTV 129
F T SGK V + ++++ + +V G D +F E P+++ G SN F T GK V
Sbjct: 1580 FTTASGKNVTVSETALNEVKAVFAGCDE---ATFDLE--PKKS-LG-SNIGFSTAGGKKV 1632
Query: 130 NISSAGLVRAKSLL-GLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFESDTSVLRP 188
ISS L RA++L EE + FE + T + ++ V GN+ T+ P
Sbjct: 1633 TISSTALQRAQTLFKDCEEEKE--VFESEKAPLPTKSFHARSEDIVDGNLKFDQTNKKNP 1690
Query: 189 SSISKAG 195
+ +G
Sbjct: 1691 RLSTASG 1697
Score = 79 (32.9 bits), Expect = 9.5e-42, Sum P(3) = 9.5e-42
Identities = 37/146 (25%), Positives = 66/146 (45%)
Query: 47 LLLEGHSKLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGE 106
L G S + E GN +NV F T G+ + + ++++KA ++ DC E
Sbjct: 1347 LACNGVSLIPEPGNSSGNNVG---FSTAGGRKMDISVTALQKANNLF---KDC------E 1394
Query: 107 EHPRENGFGFSNSLFQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMT-ST 165
E + ++ F T SGK V +S L +++ G ++ SF L+ +++ +
Sbjct: 1395 EESLASR-SLAHQGFTTASGKNVFVSEKALSEVRAVFA---GCDETSFS-LELKKLSVNN 1449
Query: 166 PRFEVKEGVKGNVFESDTSVLRPSSI 191
F G K + SDTS+ R ++
Sbjct: 1450 VGFSTAGGKKVTI--SDTSLQRTMNL 1473
Score = 76 (31.8 bits), Expect = 1.3e-41, Sum P(5) = 1.3e-41
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 209 MMQTEGLNSAPKPPQ-----IKFQTAGGRSLSVSSDALQYARNLLGDPE 252
M+ G++ P+P + F TAGGR + +S ALQ A NL D E
Sbjct: 1346 MLACNGVSLIPEPGNSSGNNVGFSTAGGRKMDISVTALQKANNLFKDCE 1394
Score = 70 (29.7 bits), Expect = 4.2e-42, Sum P(4) = 4.2e-42
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 379 INSLGRSS--GKPLADITNSTSTACANIKQTCEKKRLLRSSISPFKRPRISKFSTPLRTN 436
+N++G S+ GK + I++++ N+ Q CE++ L S+ K F+T N
Sbjct: 1447 VNNVGFSTAGGKKVT-ISDTSLQRTMNLFQDCEEESLGSRSL---KHQGCKGFTTASGKN 1502
Query: 437 LS-SPNGLSTLSSEQSGCEKKVFSRYPYQI 465
++ S LS + + +GC++ FS P I
Sbjct: 1503 VTVSEKALSEVRAVFAGCDEASFSHEPKNI 1532
Score = 70 (29.7 bits), Expect = 8.2e-41, Sum P(3) = 8.2e-41
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 65 NVSTPMFKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGF-GFSNSLFQT 123
+V+ F T GK V + +S+++ +++ DC G + G GF+ T
Sbjct: 1446 SVNNVGFSTAGGKKVTISDTSLQRTMNLF---QDCEEESLGSRSLKHQGCKGFT-----T 1497
Query: 124 GSGKTVNISSAGLVRAKSLL-GLEE 147
SGK V +S L +++ G +E
Sbjct: 1498 ASGKNVTVSEKALSEVRAVFAGCDE 1522
Score = 63 (27.2 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 32/138 (23%), Positives = 56/138 (40%)
Query: 121 FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGL---QHTRMTSTPRFEVKEGVKGN 177
F+T GK +++S L +AK EE + +F G+ +H + S+ + + + N
Sbjct: 901 FKTAKGKAISVSEKSLNKAKHFF--EEDYKEATFTGVINQEHFKTESSVKTCIS--TENN 956
Query: 178 VFESDTSV-LRPSSISKA----GFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGR 232
++ V L ++ A + E+ + + + F TA G
Sbjct: 957 NAQTKQDVRLSCGEVNAAHNMINWQEAGNAGTEPNCLRDKTDVVCVDSNIHFGFSTARGA 1016
Query: 233 SLSVSSDALQYARNLLGD 250
L VS AL+ AR L D
Sbjct: 1017 KLKVSEKALEQARMFLND 1034
Score = 59 (25.8 bits), Expect = 1.3e-41, Sum P(5) = 1.3e-41
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 118 NSLFQTGSGKTVNISSAGLVRAKSLL 143
N F T SGK V++S+ L RAK +L
Sbjct: 1242 NCGFSTASGKKVSVSAEALQRAKDVL 1267
Score = 55 (24.4 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 226 FQTAGGRSLSVSSDALQYARNLLGDPELGTFFHE 259
F TA G++++VS AL R + + +F HE
Sbjct: 1495 FTTASGKNVTVSEKALSEVRAVFAGCDEASFSHE 1528
Score = 53 (23.7 bits), Expect = 1.6e-42, Sum P(4) = 1.6e-42
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 48 LLEGHSKLRENGNEGADNVSTPMFKTGSGKAVPLKQSSIEKA 89
L++G + ++ + + T FKT GKA+ + + S+ KA
Sbjct: 879 LVDGMRSILSKSSDNS-HFHTFGFKTAKGKAISVSEKSLNKA 919
Score = 51 (23.0 bits), Expect = 2.6e-38, Sum P(3) = 2.6e-38
Identities = 41/187 (21%), Positives = 73/187 (39%)
Query: 172 EGVKGNVFESDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGG 231
+ + GN T+V + ++ + + FK+ ++ ++ A K F TA G
Sbjct: 1530 KNISGNKIGFSTTVEKMTTALEMPNNNNNFKDCEEESLASRNLMHQACKG----FTTASG 1585
Query: 232 RSLSVSSDALQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFF 291
++++VS AL + + + TF E + L S + F + K T+
Sbjct: 1586 KNVTVSETALNEVKAVFAGCDEATFDLE---PKKSLGS--NIGFSTAGGKKVTISSTALQ 1640
Query: 292 RLGTAGTKTASKNFTSPLRLFSNPVRS-RINSENINTSANLIEKFDAVDHDG--VSGLNG 348
R T + P +S SE+I NL KFD + +S +G
Sbjct: 1641 RAQTLFKDCEEEKEVFESEKAPLPTKSFHARSEDI-VDGNL--KFDQTNKKNPRLSTASG 1697
Query: 349 KIPSIKK 355
K+ S+ K
Sbjct: 1698 KVVSVTK 1704
Score = 47 (21.6 bits), Expect = 2.8e-39, Sum P(5) = 2.8e-39
Identities = 24/106 (22%), Positives = 41/106 (38%)
Query: 306 TSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPSIKKPIRSTHGHKA 365
TSP+ LF PV + N+ + S ++K DH G N P S +
Sbjct: 1895 TSPV-LF--PVNQQSNNIEEHCSTESVQKRCNSDHMG-GVFNPPFQKNMNPPTSNSQDAS 1950
Query: 366 IMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQTCEKK 411
+ + + + +N + K + I + + C KQ C +K
Sbjct: 1951 KVSSGIVLSF-NVVNQEENPNSKEMDQIMAISKSHCDRGKQNCNEK 1995
Score = 47 (21.6 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVL-GTDNDCGISFAGE-EHPRENGFGFSNSL 120
F T SGK V + + ++ + +V G D SF+ E ++ N GFS ++
Sbjct: 1495 FTTASGKNVTVSEKALSEVRAVFAGCDE---ASFSHEPKNISGNKIGFSTTV 1543
Score = 45 (20.9 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 58 NGNEGAD--NVSTPMFKTGSGKAVPLKQSSIEK 88
+GN D N P T SGK V + + S+E+
Sbjct: 1677 DGNLKFDQTNKKNPRLSTASGKVVSVTKVSLEE 1709
Score = 42 (19.8 bits), Expect = 1.7e-40, Sum P(5) = 1.7e-40
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENG 113
F T G + + + ++E+A L + G S + PR +G
Sbjct: 1010 FSTARGAKLKVSEKALEQARMFLNDVDSIGESQTPKLVPRSSG 1052
Score = 39 (18.8 bits), Expect = 3.4e-40, Sum P(5) = 3.4e-40
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 69 PMFKTGSGKAVPLKQSSIEKALSVL 93
P FKT + K + + +I KA + L
Sbjct: 591 PTFKTANNKFICIPTEAIVKAKASL 615
>UNIPROTKB|I3LFN0 [details] [associations]
symbol:I3LFN0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] InterPro:IPR015187 InterPro:IPR015252 Pfam:PF09103
Pfam:PF09169 GO:GO:0005634 GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0007090
InterPro:IPR015525 InterPro:IPR015188 PANTHER:PTHR11289
Pfam:PF09104 SUPFAM:SSF81872 GeneTree:ENSGT00390000003602
Ensembl:ENSSSCT00000025547 OMA:QASMERS Uniprot:I3LFN0
Length = 907
Score = 446 (162.1 bits), Expect = 6.9e-38, Sum P(2) = 6.9e-38
Identities = 144/490 (29%), Positives = 224/490 (45%)
Query: 514 GAEALFNMLAQS-GASTQYASKLWVSNHYKWIVWKLACYERCYLAKSAGKFLTVFNVLEE 572
G E + L + G + S++WV NHY+WI+WKLA E + + A + L VL +
Sbjct: 119 GKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQ 178
Query: 573 LKYRYEREVNNGHRSAIKRILEGDALPSSMMVLCISAIHMNCVPKIETHPEAQNGAENSY 632
LKYRY+ E++ RSAIK+I+E D + +VLC+S I + ET N + +
Sbjct: 179 LKYRYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEIALG-TNITETRSNKTNSVDTTK 237
Query: 633 AAKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSPLEASGSIS 692
A +ELTDGWY++ A LD LS L G+L VGQK+ I GA L G +PLEA S+
Sbjct: 238 VAMVELTDGWYAIKAQLDPPLSALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLM 297
Query: 693 LQLNINGTYRAHWADRLGFCKGFGAPLAFRCIKSNGGP-----VPR------TLVGVTRI 741
L++N + + F C+ GG + R T++ +
Sbjct: 298 LKVNSITAHSCFKKKKTKKTVTDSKNYIFLCVLFGGGGKSEIIIERYYILKVTIIQFLYL 357
Query: 742 YPVLYKERLSDGRSIVRSERMECK-VMQLYQHRQSMVVEGIVSEFQRGNKDSHILNDSNS 800
+P L S R K ++QL H +E + +
Sbjct: 358 FPNLPTREHSSFRFSWSMFSSVLKFIVQLLSHA-FFPLENAAERCLPSRALTRQQVRALQ 416
Query: 801 EGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEATRQSNMERSIEKALENAGLRE 860
+GA+L++ ++ +P + S EQL + ++ L +Q+ ++ KA+++A E
Sbjct: 417 DGAELYEAVKNAPDPSYLEGYFSEEQLRALNNHRQLLNDKKQAQIQLEFRKAMQSAEQGE 476
Query: 861 ----RDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQCELVEGQAYAILGLIP 916
RDVTP ++R++ K K S I++IW P+ L EG+ Y I L
Sbjct: 477 QILPRDVTPVWKLRIISYNKKE---KDSV---ILSIWRPSSDLCSLLTEGKRYRIYHLTA 530
Query: 917 MNSDSNT----LYLQARGSTTKWQPLSPLATEHFKPFFSPRRSVLISNLGEV---PLSSE 969
S S + + L A ST ++Q L P + E + PR + + L + P SE
Sbjct: 531 AKSKSKSERANIQLTATKST-QYQQL-PASDEILFQLYRPREPLHFNKLLDPDFQPPCSE 588
Query: 970 FDIAAFVVHV 979
D+ FVV V
Sbjct: 589 VDLIGFVVSV 598
Score = 45 (20.9 bits), Expect = 6.9e-38, Sum P(2) = 6.9e-38
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 156 GLQHTRMTST-PRFEVKEGVKGNV 178
G + TST PR +KE V+G V
Sbjct: 31 GSLYXAKTSTLPRISLKEAVEGRV 54
>DICTYBASE|DDB_G0293414 [details] [associations]
symbol:DDB_G0293414 "BRCA2 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007090 "regulation of
S phase of mitotic cell cycle" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] InterPro:IPR015187 InterPro:IPR015252 Pfam:PF09103
Pfam:PF09169 dictyBase:DDB_G0293414 GO:GO:0005634 GO:GO:0003697
GO:GO:0000724 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AAFI02000207 GO:GO:0007090 InterPro:IPR015525
PANTHER:PTHR11289 SUPFAM:SSF81872 eggNOG:NOG331296 KO:K08775
RefSeq:XP_629153.1 EnsemblProtists:DDB0219853 GeneID:8629210
KEGG:ddi:DDB_G0293414 InParanoid:Q54BU8 OMA:ISKDKMD Uniprot:Q54BU8
Length = 1623
Score = 235 (87.8 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 86/288 (29%), Positives = 133/288 (46%)
Query: 384 RSSGKPLADITNSTSTACANIKQTCEKKRLLRSSISPFKRPRISKFS-TPLRTNLSSPNG 442
+S+ P T +TST + K ISP P+ SK + +P ++ N
Sbjct: 585 KSNNTPTTPTTTTTSTTISPASPNGNSK-----GISP---PK-SKLNISPSKSTTPINNN 635
Query: 443 LSTLSSEQSGCEKKVFSRYPYQIPRMCVKEYFGMP--PSAQGMLDHLQDQVRQMKSHNAD 500
+T ++ + +KK R +K+ G P S +G++ ++ V ++ S NA
Sbjct: 636 NNTNNNNNNNIQKKPIDN------RRKLKD-LGRPFLVSCEGLV---KNDVLEITSRNAS 685
Query: 501 KYMFH------DASGLNCIGAEALFNMLAQSGASTQ-YASKLWVSNHYKWIVWKLACYER 553
+Y F D IG L+ L + S S+ WVSNHY WIVWKLA ER
Sbjct: 686 EYRFENNGEVKDIGKSKTIGVADLYIYLTKINQSNAALVSQEWVSNHYGWIVWKLASMER 745
Query: 554 CYLAKSAGKFLTVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPSSM-MVLCISAIHM 612
+ + GK+L + V+ +LK R E E+N R +K+I E D PS + MVLCIS+I
Sbjct: 746 SFPLEFGGKYLKLQRVVNQLKQRIEIEINQAKRPILKKIYERDQ-PSELPMVLCISSILD 804
Query: 613 NCVP---KIETHPEAQNGAENSYAAKLELTDGWYSVDAFLDVLLSKHL 657
+ +P N N+ +E DG S+D +D+ ++ L
Sbjct: 805 DGYGGGINNNNNPNNPNNNNNNNNCTVENDDGIISMDD-IDITMNDDL 851
Score = 214 (80.4 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 57/155 (36%), Positives = 82/155 (52%)
Query: 634 AKLELTDGWYSVDAFLDVLLSKHLAAGKLFVGQKLRIWGAILCGWVGPVSPLEAS-GSIS 692
A +ELTDGWY + LD L++ L GKLFVGQKL I A + G +SPLE +
Sbjct: 908 ATIELTDGWYPIKGALDPFLTQCLKQGKLFVGQKLYIQNAGIVGQENGISPLEDGFEQVH 967
Query: 693 LQLNINGTYRAHWADRLGFCKGFGAPLAFRCIKSNGGPVPRTLVGVTRIYPVLYKERL-- 750
L+L N T R W + LG K P++ + I GG V V VT IY + +KE +
Sbjct: 968 LKLFTNSTRRVSWYENLGARKSM-FPISLKSIIPGGGTVACLKVEVTHIYKLSFKETIMG 1026
Query: 751 SDG--RSIV-RSERMECKVMQLYQHRQSMVVEGIV 782
DG ++++ R E E + Q Y+ + + E ++
Sbjct: 1027 EDGSLKTVITRCENEEQQYKQQYESKAEIAREKLL 1061
Score = 67 (28.6 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 33/136 (24%), Positives = 60/136 (44%)
Query: 197 AESRFKNKISS-NMMQTEGLNSAPKPPQIK-FQTAGGRSLSVSSDALQYARNLL---GDP 251
++S K +IS + Q + S PP K F T G ++ +S + L+ A+ L GD
Sbjct: 21 SDSSKKTRISPPSTPQPQTTTSLIPPPVFKGFSTGRGAAVVISEEKLRLAKKKLSSIGDE 80
Query: 252 ELGTFFHEVD--VDQL-DLTSFKHRRFDDSSSNKENDVFTSFFRLGTAGTKTASKNFTSP 308
++ VD D + + +++S++ ND + T T T + +SP
Sbjct: 81 DIKDLLPSESGAVDNSNDFLTMTNSNSNNNSNSNNNDT------INTTATITPTTTSSSP 134
Query: 309 LRLFSNPVRSRINSEN 324
L L + S ++S +
Sbjct: 135 L-LQTTTTSSSLSSSS 149
Score = 62 (26.9 bits), Expect = 7.8e-33, Sum P(4) = 7.8e-33
Identities = 55/253 (21%), Positives = 91/253 (35%)
Query: 71 FKTGSGKAVPLKQSSIEKALSVLGT--DNDCGISFAGEEHPRENG-FGFSNSLFQT--GS 125
F TG G AV + + ++ A L + D D E +N F NS GS
Sbjct: 169 FSTGRGVAVVISEEKLKLAQKKLSSIADEDIKDLLPSEGGVVDNNDFLAMNSSSNNSNGS 228
Query: 126 GKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFESDTSV 185
N ++ + N+ + T +S+ + S +S
Sbjct: 229 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTASSSSSSSSSSSSSSSSSSSSSSSS 288
Query: 186 LRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPK---------PPQIK-FQTAGGRSLS 235
SS S + + S + SS +QT +S P+ P K F T G ++
Sbjct: 289 SSSSSSSSSSSSSSSSSSSSSSPSLQTTTSSSPPQLLQTTTSSIPTTFKGFSTGRGVAVV 348
Query: 236 VSSDALQYARNLLG---DPELGTFFHEVD--VDQLDLTSFKHRRFDDSSSNKENDVFTSF 290
+S + L+ A+ L D ++ VD D + + ++S+S+ N T+
Sbjct: 349 ISEEKLKLAQKKLSSIADEDIKDLLPSEGGAVDNNDFLTMNNSNSNNSNSSHTNTTTTTT 408
Query: 291 FRL-GTAGTKTAS 302
T T TAS
Sbjct: 409 TTTTNTTNTTTAS 421
Score = 55 (24.4 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 50/231 (21%), Positives = 95/231 (41%)
Query: 276 DDSSSNKENDVF--TSFFRLGTAGTKTASKNFTSPL-RLFSNPVRSR--INSENINTSAN 330
DD +SN E+D T T +T + P+ + FS + I+ E + +
Sbjct: 13 DDDNSNVESDSSKKTRISPPSTPQPQTTTSLIPPPVFKGFSTGRGAAVVISEEKLRLAK- 71
Query: 331 LIEKFDAVDHDGVSGLNGKIPSIKKPIRSTHGHKAIMDNSVEDDIGSKINSLGRSSGKPL 390
+K ++ + + L +PS + +++ M NS + + NS +
Sbjct: 72 --KKLSSIGDEDIKDL---LPSESGAVDNSNDFLT-MTNS---NSNNNSNSNNNDTINTT 122
Query: 391 ADITNSTSTACANIKQTCEKKRLLRSSISPFKRPRISKFSTPLR-TNLSSPNGLSTLSSE 449
A IT T+T+ + + QT L SS P P+ + S P S+ G++ + SE
Sbjct: 123 ATIT-PTTTSSSPLLQTTTTSSSLSSSSPPPPLPQTTTSSIPPTFKGFSTGRGVAVVISE 181
Query: 450 QSGCEKKVFSRYPYQIPRMCVKEYFGMPPSAQGMLDHLQDQVRQMKSHNAD 500
+ + K+ + I +K+ PS G++D+ S+N++
Sbjct: 182 E---KLKLAQKKLSSIADEDIKDLL---PSEGGVVDNNDFLAMNSSSNNSN 226
Score = 52 (23.4 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 29/122 (23%), Positives = 49/122 (40%)
Query: 131 ISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFESDTSVLRPSS 190
+SS G K LL E G D S + L T S N + T+ + P++
Sbjct: 74 LSSIGDEDIKDLLPSESGAVDNSNDFLTMTNSNSNNN----SNSNNNDTINTTATITPTT 129
Query: 191 ISKAGFAESRFKNKISSNMMQTEGL---NSAPKPPQIK-FQTAGGRSLSVSSDALQYARN 246
S + ++ + S+ L ++ PP K F T G ++ +S + L+ A+
Sbjct: 130 TSSSPLLQTTTTSSSLSSSSPPPPLPQTTTSSIPPTFKGFSTGRGVAVVISEEKLKLAQK 189
Query: 247 LL 248
L
Sbjct: 190 KL 191
Score = 50 (22.7 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 24/64 (37%), Positives = 30/64 (46%)
Query: 416 SSISPFKRPRISKFSTPLRTNLSSPNGLSTLSSEQSGCEKKVFSRYPYQIPRMCVKEYFG 475
SSI+P P S P TNL+S ST + Q K S+YP Q P VK+ F
Sbjct: 462 SSIAPPTTPNRSP--VPTSTNLNS----STATVPQLTTPTK--SKYPLQSP---VKKTFV 510
Query: 476 MPPS 479
P+
Sbjct: 511 YNPN 514
Score = 48 (22.0 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 966 LSSEFDIAAFVVHVGDV 982
+ SE D+ F+++VGD+
Sbjct: 1342 IGSECDLVVFILYVGDI 1358
Score = 47 (21.6 bits), Expect = 2.7e-31, Sum P(4) = 2.7e-31
Identities = 22/74 (29%), Positives = 31/74 (41%)
Query: 66 VSTPMFK---TGSGKAVPLKQSSI---EKALSVLGTDNDCGISFAGEEHPRENGFGFSNS 119
+ P+FK TG G AV + + + +K LS +G D D E +N F
Sbjct: 44 IPPPVFKGFSTGRGAAVVISEEKLRLAKKKLSSIG-DEDIKDLLPSESGAVDNSNDF--- 99
Query: 120 LFQTGSGKTVNISS 133
L T S N +S
Sbjct: 100 LTMTNSNSNNNSNS 113
Score = 46 (21.3 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 24 QPEPN---GSPIQPHSSSFRLPSMSDLLLEGHSKLRENGNEGADNVSTPMFKTGSGKAVP 80
QP+ N SP SSS S++ S + + N + + P T + P
Sbjct: 441 QPQQNIRAPSPPSSFSSSSSTSSIAPPTTPNRSPVPTSTNLNSSTATVPQLTTPTKSKYP 500
Query: 81 LKQSSIEK 88
L QS ++K
Sbjct: 501 L-QSPVKK 507
Score = 46 (21.3 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 35/180 (19%), Positives = 68/180 (37%)
Query: 274 RFDDSSSNKENDVFTSFFRLGTAGTKTASKNFTSPLRLFSNPVRSRI-NSENINTSANLI 332
R DDSS+ + R + + +S + TS + + P RS + S N+N+S +
Sbjct: 430 RSDDSSAPSSPQPQQNI-RAPSPPSSFSSSSSTSSIAPPTTPNRSPVPTSTNLNSSTATV 488
Query: 333 EKFDAVDHDGVSGLNGKIPSIKKPIRSTHGHKAIMDNSVEDDIGSKINSLGRSSGKPLAD 392
+ + K P ++ P++ T + + + I SL + +
Sbjct: 489 PQL-------TTPTKSKYP-LQSPVKKTFVYNPNTTPTKKSFI-PPTKSLSPPQQQQTST 539
Query: 393 I---TNSTSTACANIKQTCEKKRLLRSSISP-FKRPRISKFSTPLRTNLSSPNGLSTLSS 448
+ TN T + K + P P+ S F P+++N + +T +S
Sbjct: 540 VPPQTNIAPTTTSTFSYPTTPKTAPKILSKPQISTPKKSSFKPPIKSNNTPTTPTTTTTS 599
Score = 41 (19.5 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 18/81 (22%), Positives = 36/81 (44%)
Query: 367 MDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQTCEKKRLLRSSISPFKRPRI 426
M+NS ++ S + ++ + TN+T+ + +N T S SP + I
Sbjct: 388 MNNSNSNNSNSSHTNTTTTTTTTTTNTTNTTTASTSNDNSTSRSDDSSAPS-SPQPQQNI 446
Query: 427 SKFSTPLRTNLSSPNGLSTLS 447
S P ++ SS + S+++
Sbjct: 447 RAPSPP--SSFSSSSSTSSIA 465
Score = 41 (19.5 bits), Expect = 4.8e-13, Sum P(4) = 4.8e-13
Identities = 14/65 (21%), Positives = 26/65 (40%)
Query: 276 DDSSSNKENDVFTSFFRLGTAGTKTASKNFTSPLRLFSNPVRSRINSENINTSANLIEKF 335
DD +D+ T+ + T A+ N + +N + N+ N N + N K
Sbjct: 841 DDIDITMNDDLETASTSTTISSTNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKT 900
Query: 336 DAVDH 340
+ + H
Sbjct: 901 NYIQH 905
Score = 39 (18.8 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 746 YKERLSDGRSIVRSERMECKVMQLYQHRQSMVVEGIVSEFQRGNKDSHIL-NDSN 799
YK++ I R + +E QL + ++ ++ + E Q+ +L N N
Sbjct: 1045 YKQQYESKAEIAREKLLESTSKQLEKKQKEDILMSSLQEQQQQKLKGKLLPNQQN 1099
Score = 37 (18.1 bits), Expect = 3.8e-13, Sum P(4) = 3.8e-13
Identities = 15/81 (18%), Positives = 36/81 (44%)
Query: 368 DNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQTCEKKRLLRSSISPFKRPRIS 427
+N+ ++ + N+ ++ ++S+S++ ++ + SS S S
Sbjct: 239 NNNNNNNNNNNNNNNNNNNNTTTTTASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 298
Query: 428 KFSTPLRTNLSSPNGLSTLSS 448
S+ ++ SSP+ +T SS
Sbjct: 299 SSSSSSSSSSSSPSLQTTTSS 319
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1112 1089 0.00086 123 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 635 (67 KB)
Total size of DFA: 507 KB (2234 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 98.68u 0.19s 98.87t Elapsed: 00:00:04
Total cpu time: 98.70u 0.19s 98.89t Elapsed: 00:00:04
Start: Sat May 11 04:48:28 2013 End: Sat May 11 04:48:32 2013