Query 001274
Match_columns 1109
No_of_seqs 1113 out of 6983
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 20:29:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001274.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001274hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 8E-118 2E-122 1156.4 70.2 945 1-1084 1-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 5.8E-61 1.3E-65 623.9 31.3 515 168-710 69-585 (968)
3 KOG1187 Serine/threonine prote 100.0 2.4E-47 5.2E-52 429.4 27.5 290 788-1083 61-355 (361)
4 KOG0192 Tyrosine kinase specif 100.0 7.5E-45 1.6E-49 405.3 24.5 262 804-1086 43-309 (362)
5 KOG0197 Tyrosine kinases [Sign 100.0 3.1E-45 6.6E-50 404.0 16.7 257 804-1084 208-465 (468)
6 KOG0581 Mitogen-activated prot 100.0 1.3E-44 2.8E-49 380.6 20.3 261 803-1084 80-343 (364)
7 KOG0575 Polo-like serine/threo 100.0 1.1E-43 2.3E-48 394.7 22.4 258 802-1084 18-277 (592)
8 KOG0615 Serine/threonine prote 100.0 4.1E-44 8.9E-49 377.8 16.9 258 802-1080 172-441 (475)
9 KOG0595 Serine/threonine-prote 100.0 6.9E-44 1.5E-48 377.4 17.0 202 800-1009 8-216 (429)
10 KOG0472 Leucine-rich repeat pr 100.0 2.7E-46 5.9E-51 391.0 -11.7 491 118-686 43-541 (565)
11 KOG0472 Leucine-rich repeat pr 100.0 9.3E-46 2E-50 387.0 -7.7 473 97-613 46-541 (565)
12 KOG0593 Predicted protein kina 100.0 6.4E-43 1.4E-47 353.9 11.5 267 802-1076 2-284 (396)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 1.8E-42 3.9E-47 389.7 14.6 259 803-1084 630-895 (996)
14 KOG1026 Nerve growth factor re 100.0 7.9E-42 1.7E-46 394.7 18.2 265 802-1087 486-769 (774)
15 KOG0591 NIMA (never in mitosis 100.0 1.2E-42 2.6E-47 348.4 8.3 261 802-1079 19-284 (375)
16 KOG0598 Ribosomal protein S6 k 100.0 3.3E-41 7.2E-46 354.9 18.6 253 801-1077 24-282 (357)
17 KOG0661 MAPK related serine/th 100.0 6.9E-42 1.5E-46 367.2 12.1 276 801-1089 9-304 (538)
18 KOG0600 Cdc2-related protein k 100.0 1.3E-40 2.8E-45 360.1 17.9 268 802-1079 117-403 (560)
19 KOG0193 Serine/threonine prote 100.0 7.6E-41 1.7E-45 369.1 14.9 268 799-1087 389-660 (678)
20 KOG4194 Membrane glycoprotein 100.0 6.6E-42 1.4E-46 372.9 5.2 370 217-612 79-451 (873)
21 KOG0592 3-phosphoinositide-dep 100.0 2.1E-40 4.5E-45 361.4 16.2 255 802-1080 73-342 (604)
22 KOG0597 Serine-threonine prote 100.0 2E-40 4.4E-45 360.3 14.2 271 802-1098 2-274 (808)
23 KOG0659 Cdk activating kinase 100.0 1E-39 2.2E-44 325.8 17.9 268 802-1080 2-285 (318)
24 KOG4194 Membrane glycoprotein 100.0 1.2E-41 2.5E-46 371.0 3.8 359 267-627 81-442 (873)
25 KOG0578 p21-activated serine/t 100.0 4.4E-40 9.6E-45 363.0 15.7 253 802-1079 273-526 (550)
26 KOG0582 Ste20-like serine/thre 100.0 1.8E-39 4E-44 345.9 19.3 266 802-1080 26-297 (516)
27 KOG0198 MEKK and related serin 100.0 1.2E-39 2.5E-44 351.7 17.0 260 802-1084 17-284 (313)
28 KOG0588 Serine/threonine prote 100.0 3E-39 6.6E-44 359.1 20.5 255 802-1082 12-269 (786)
29 KOG0194 Protein tyrosine kinas 100.0 1.3E-39 2.7E-44 366.4 17.2 263 802-1087 157-427 (474)
30 KOG1095 Protein tyrosine kinas 100.0 2.2E-39 4.8E-44 388.3 18.6 262 802-1084 692-965 (1025)
31 KOG4721 Serine/threonine prote 100.0 2.3E-40 5E-45 359.2 8.8 243 807-1083 129-371 (904)
32 KOG0583 Serine/threonine prote 100.0 3E-38 6.5E-43 356.4 25.9 258 800-1081 15-280 (370)
33 KOG1094 Discoidin domain recep 100.0 4.3E-39 9.4E-44 351.2 17.1 265 801-1080 537-804 (807)
34 KOG0663 Protein kinase PITSLRE 100.0 1.1E-38 2.4E-43 327.6 18.2 269 802-1081 76-366 (419)
35 KOG0618 Serine/threonine phosp 100.0 4.5E-41 9.8E-46 386.2 -1.3 507 77-610 3-510 (1081)
36 KOG3653 Transforming growth fa 100.0 8E-38 1.7E-42 335.8 23.6 264 802-1086 210-509 (534)
37 KOG0616 cAMP-dependent protein 100.0 9.3E-39 2E-43 323.6 15.5 249 802-1078 44-299 (355)
38 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.3E-38 9.4E-43 360.0 21.7 263 801-1083 6-337 (338)
39 KOG0605 NDR and related serine 100.0 6.1E-38 1.3E-42 343.0 19.0 260 800-1080 139-449 (550)
40 KOG0580 Serine/threonine prote 100.0 1.3E-38 2.9E-43 313.4 11.8 254 802-1080 22-277 (281)
41 KOG4278 Protein tyrosine kinas 100.0 1.4E-38 3.1E-43 347.5 12.4 264 796-1083 261-526 (1157)
42 KOG0611 Predicted serine/threo 100.0 2.5E-38 5.4E-43 330.6 12.3 252 802-1080 53-307 (668)
43 KOG4257 Focal adhesion tyrosin 100.0 7.8E-38 1.7E-42 342.9 16.4 257 802-1082 389-651 (974)
44 KOG0201 Serine/threonine prote 100.0 1.1E-38 2.5E-43 340.3 9.4 250 802-1076 13-263 (467)
45 PHA02988 hypothetical protein; 100.0 4.6E-37 9.9E-42 341.5 22.5 249 808-1082 26-281 (283)
46 cd07848 STKc_CDKL5 Catalytic d 100.0 2.6E-37 5.6E-42 345.2 19.4 267 802-1076 1-284 (287)
47 KOG0618 Serine/threonine phosp 100.0 1E-39 2.2E-44 375.2 -0.7 506 125-683 3-510 (1081)
48 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-36 2.3E-41 339.5 23.3 256 804-1079 2-264 (285)
49 KOG0585 Ca2+/calmodulin-depend 100.0 4.4E-37 9.5E-42 329.5 19.2 268 800-1090 95-386 (576)
50 cd05612 STKc_PRKX_like Catalyt 100.0 1.8E-37 3.8E-42 346.8 16.2 251 802-1080 1-258 (291)
51 KOG0694 Serine/threonine prote 100.0 2.4E-37 5.1E-42 347.8 17.1 243 802-1070 368-613 (694)
52 KOG0660 Mitogen-activated prot 100.0 3.1E-37 6.8E-42 323.4 16.4 272 801-1083 21-317 (359)
53 cd05104 PTKc_Kit Catalytic dom 100.0 8.6E-37 1.9E-41 352.9 21.4 260 801-1080 34-374 (375)
54 cd05096 PTKc_DDR1 Catalytic do 100.0 2.4E-36 5.1E-41 340.3 23.7 263 802-1078 5-303 (304)
55 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.4E-36 5.1E-41 333.3 23.1 256 802-1080 5-265 (266)
56 cd05571 STKc_PKB Catalytic dom 100.0 6.9E-37 1.5E-41 347.2 18.0 245 808-1077 1-252 (323)
57 KOG2052 Activin A type IB rece 100.0 2.5E-36 5.4E-41 321.8 20.9 275 792-1082 201-505 (513)
58 PTZ00263 protein kinase A cata 100.0 1.3E-36 2.8E-41 345.6 20.1 249 802-1078 18-273 (329)
59 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.4E-36 7.4E-41 330.1 22.7 251 802-1077 4-255 (256)
60 KOG0589 Serine/threonine prote 100.0 4.3E-37 9.3E-42 339.0 15.3 253 802-1077 4-259 (426)
61 cd05106 PTKc_CSF-1R Catalytic 100.0 1.6E-36 3.4E-41 350.3 20.7 260 802-1081 38-373 (374)
62 cd06649 PKc_MEK2 Catalytic dom 100.0 2E-36 4.3E-41 344.6 21.2 272 802-1083 5-308 (331)
63 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.6E-36 9.9E-41 335.0 23.4 263 802-1076 5-285 (288)
64 KOG2345 Serine/threonine prote 100.0 3E-37 6.5E-42 305.1 11.3 262 802-1080 21-300 (302)
65 KOG0033 Ca2+/calmodulin-depend 100.0 2.3E-38 5.1E-43 311.0 3.1 257 802-1080 11-271 (355)
66 KOG0658 Glycogen synthase kina 100.0 4.3E-37 9.2E-42 323.0 12.7 263 803-1077 25-307 (364)
67 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2E-36 4.4E-41 345.2 19.3 258 802-1079 1-260 (333)
68 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.8E-36 1.5E-40 336.3 23.3 268 801-1079 4-291 (303)
69 cd05614 STKc_MSK2_N N-terminal 100.0 4.9E-36 1.1E-40 342.1 21.7 256 803-1078 1-269 (332)
70 KOG0594 Protein kinase PCTAIRE 100.0 3.2E-36 6.8E-41 318.0 18.5 267 802-1077 11-303 (323)
71 PHA03212 serine/threonine kina 100.0 6E-36 1.3E-40 346.4 22.7 263 802-1079 92-379 (391)
72 cd05585 STKc_YPK1_like Catalyt 100.0 5.8E-36 1.3E-40 338.0 21.5 243 810-1077 1-248 (312)
73 KOG1989 ARK protein kinase fam 100.0 2.9E-36 6.3E-41 350.9 19.3 260 802-1085 37-316 (738)
74 cd05105 PTKc_PDGFR_alpha Catal 100.0 8.4E-36 1.8E-40 345.2 23.1 262 801-1082 36-399 (400)
75 cd05595 STKc_PKB_beta Catalyti 100.0 3E-36 6.6E-41 341.7 19.0 245 808-1077 1-252 (323)
76 cd07862 STKc_CDK6 Catalytic do 100.0 6.8E-36 1.5E-40 334.3 21.5 265 802-1076 1-287 (290)
77 cd06650 PKc_MEK1 Catalytic dom 100.0 6.7E-36 1.5E-40 340.3 21.7 271 802-1082 5-305 (333)
78 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.5E-36 1.8E-40 341.4 22.5 268 803-1080 1-294 (338)
79 cd05072 PTKc_Lyn Catalytic dom 100.0 7.2E-36 1.6E-40 328.6 20.8 254 802-1079 6-260 (261)
80 PTZ00426 cAMP-dependent protei 100.0 5E-36 1.1E-40 341.4 20.2 249 802-1078 30-286 (340)
81 cd05593 STKc_PKB_gamma Catalyt 100.0 1E-35 2.2E-40 338.1 22.6 246 808-1078 1-253 (328)
82 cd05113 PTKc_Btk_Bmx Catalytic 100.0 9E-36 1.9E-40 326.6 20.8 251 802-1077 4-255 (256)
83 PLN00034 mitogen-activated pro 100.0 1.4E-35 3E-40 341.0 23.2 255 802-1082 74-334 (353)
84 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-35 2.8E-40 326.5 21.2 255 801-1079 5-260 (261)
85 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.2E-36 4.9E-41 347.9 15.3 254 802-1078 1-287 (350)
86 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-35 2.4E-40 345.1 21.0 257 803-1079 2-308 (381)
87 KOG0599 Phosphorylase kinase g 100.0 1.2E-36 2.6E-41 303.3 10.9 258 801-1080 16-287 (411)
88 cd05584 STKc_p70S6K Catalytic 100.0 2E-35 4.3E-40 335.3 22.4 246 808-1078 2-258 (323)
89 cd05621 STKc_ROCK2 Catalytic d 100.0 7.6E-36 1.7E-40 343.8 19.3 260 800-1080 41-308 (370)
90 cd05054 PTKc_VEGFR Catalytic d 100.0 1.4E-35 3E-40 337.8 21.1 261 802-1082 7-335 (337)
91 cd05605 STKc_GRK4_like Catalyt 100.0 2.1E-35 4.6E-40 329.1 22.0 258 803-1080 1-265 (285)
92 KOG0667 Dual-specificity tyros 100.0 9E-36 1.9E-40 335.9 18.8 267 802-1083 186-509 (586)
93 cd05052 PTKc_Abl Catalytic dom 100.0 3.4E-35 7.4E-40 323.5 22.9 255 802-1080 6-262 (263)
94 cd05108 PTKc_EGFR Catalytic do 100.0 3.9E-35 8.5E-40 332.1 23.8 259 802-1084 7-272 (316)
95 cd05601 STKc_CRIK Catalytic do 100.0 2.9E-36 6.2E-41 343.6 14.5 257 802-1078 1-265 (330)
96 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-35 2.5E-40 337.5 19.2 248 804-1077 1-258 (324)
97 KOG4279 Serine/threonine prote 100.0 2.3E-36 5E-41 334.3 13.0 249 808-1077 581-833 (1226)
98 cd07876 STKc_JNK2 Catalytic do 100.0 5.1E-35 1.1E-39 337.2 24.8 270 800-1080 19-319 (359)
99 PTZ00283 serine/threonine prot 100.0 2.8E-35 6.1E-40 350.3 23.1 257 800-1076 30-297 (496)
100 KOG0610 Putative serine/threon 100.0 8.1E-36 1.8E-40 315.9 16.2 258 802-1079 77-395 (459)
101 cd05596 STKc_ROCK Catalytic do 100.0 1.3E-35 2.8E-40 342.5 19.4 258 801-1079 42-307 (370)
102 cd05059 PTKc_Tec_like Catalyti 100.0 3.3E-35 7.1E-40 322.3 21.7 251 802-1077 4-255 (256)
103 PF07714 Pkinase_Tyr: Protein 100.0 4.8E-36 1E-40 329.1 15.0 249 807-1077 4-259 (259)
104 cd05608 STKc_GRK1 Catalytic do 100.0 4.4E-35 9.4E-40 325.6 22.6 252 810-1079 1-260 (280)
105 cd05033 PTKc_EphR Catalytic do 100.0 7.8E-35 1.7E-39 321.3 24.4 256 802-1080 4-265 (266)
106 cd05048 PTKc_Ror Catalytic Dom 100.0 2.4E-35 5.2E-40 328.6 20.4 257 802-1079 5-282 (283)
107 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-35 2.7E-40 326.7 17.8 255 801-1079 5-260 (261)
108 cd08228 STKc_Nek6 Catalytic do 100.0 5.8E-35 1.3E-39 322.6 23.1 262 802-1081 2-266 (267)
109 cd05594 STKc_PKB_alpha Catalyt 100.0 1.9E-35 4E-40 335.9 19.7 246 808-1078 1-254 (325)
110 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-35 3E-40 343.5 19.0 268 803-1080 1-292 (372)
111 cd05628 STKc_NDR1 Catalytic do 100.0 2.4E-35 5.2E-40 340.2 20.8 203 802-1010 1-239 (363)
112 cd05590 STKc_nPKC_eta Catalyti 100.0 3.3E-35 7.1E-40 332.8 21.4 246 808-1078 1-255 (320)
113 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-35 2.6E-40 343.4 17.9 256 802-1078 1-298 (364)
114 cd05071 PTKc_Src Catalytic dom 100.0 4.4E-35 9.4E-40 322.4 21.3 254 802-1080 6-260 (262)
115 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.6E-35 9.9E-40 322.0 21.2 253 802-1079 6-259 (260)
116 cd05629 STKc_NDR_like_fungal C 100.0 1.9E-35 4E-40 343.1 19.0 254 802-1078 1-307 (377)
117 cd05592 STKc_nPKC_theta_delta 100.0 2.2E-35 4.8E-40 333.6 19.1 244 808-1076 1-248 (316)
118 cd05062 PTKc_IGF-1R Catalytic 100.0 2E-35 4.4E-40 328.1 18.4 258 800-1078 4-276 (277)
119 cd05607 STKc_GRK7 Catalytic do 100.0 5.2E-35 1.1E-39 324.5 21.5 250 810-1078 1-252 (277)
120 cd05587 STKc_cPKC Catalytic do 100.0 6.3E-35 1.4E-39 331.4 22.6 249 803-1076 1-257 (324)
121 cd05582 STKc_RSK_N N-terminal 100.0 1.6E-35 3.5E-40 335.4 17.6 244 808-1076 2-254 (318)
122 cd05618 STKc_aPKC_iota Catalyt 100.0 6.4E-35 1.4E-39 331.6 22.4 250 808-1077 1-263 (329)
123 cd05591 STKc_nPKC_epsilon Cata 100.0 4.5E-35 9.7E-40 332.2 21.1 246 808-1078 1-256 (321)
124 KOG0032 Ca2+/calmodulin-depend 100.0 3.8E-35 8.2E-40 330.5 20.2 255 801-1078 34-295 (382)
125 cd07875 STKc_JNK1 Catalytic do 100.0 7.4E-35 1.6E-39 336.6 23.1 265 800-1079 22-321 (364)
126 cd05067 PTKc_Lck_Blk Catalytic 100.0 8.9E-35 1.9E-39 319.7 22.5 253 802-1079 6-259 (260)
127 KOG4717 Serine/threonine prote 100.0 1.4E-35 3.1E-40 318.3 15.6 252 802-1078 18-272 (864)
128 cd05616 STKc_cPKC_beta Catalyt 100.0 2.9E-35 6.3E-40 334.0 18.8 249 803-1076 1-257 (323)
129 cd05588 STKc_aPKC Catalytic do 100.0 8.1E-35 1.8E-39 330.9 22.4 251 808-1078 1-264 (329)
130 cd05622 STKc_ROCK1 Catalytic d 100.0 2.9E-35 6.2E-40 339.4 18.9 262 797-1079 38-307 (371)
131 cd08529 STKc_FA2-like Catalyti 100.0 5.9E-35 1.3E-39 320.3 20.5 252 803-1076 1-253 (256)
132 cd05049 PTKc_Trk Catalytic dom 100.0 6E-35 1.3E-39 324.9 20.8 256 802-1078 5-279 (280)
133 cd05620 STKc_nPKC_delta Cataly 100.0 8E-35 1.7E-39 329.0 21.9 244 808-1076 1-248 (316)
134 KOG0577 Serine/threonine prote 100.0 2.9E-36 6.2E-41 328.7 9.5 247 804-1077 28-279 (948)
135 cd05570 STKc_PKC Catalytic dom 100.0 3.2E-35 6.9E-40 332.8 18.4 245 808-1077 1-253 (318)
136 KOG1025 Epidermal growth facto 100.0 1.6E-35 3.4E-40 334.5 15.5 256 804-1083 698-960 (1177)
137 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.1E-35 1.7E-39 336.7 21.8 262 800-1081 35-400 (401)
138 cd05625 STKc_LATS1 Catalytic d 100.0 3.4E-35 7.4E-40 341.6 18.7 255 803-1078 2-307 (382)
139 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.4E-34 5.2E-39 317.6 24.5 262 802-1081 2-266 (267)
140 PTZ00267 NIMA-related protein 100.0 9.4E-35 2E-39 346.0 22.8 252 803-1076 68-323 (478)
141 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-34 2.6E-39 327.4 22.5 244 808-1076 1-248 (316)
142 cd06625 STKc_MEKK3_like Cataly 100.0 1E-34 2.2E-39 319.8 21.4 254 802-1077 2-261 (263)
143 cd05069 PTKc_Yes Catalytic dom 100.0 1.3E-34 2.7E-39 318.5 22.0 253 802-1079 6-259 (260)
144 cd07874 STKc_JNK3 Catalytic do 100.0 9.2E-35 2E-39 334.7 21.8 269 800-1079 15-314 (355)
145 cd06646 STKc_MAP4K5 Catalytic 100.0 5.7E-35 1.2E-39 322.6 19.2 254 802-1077 9-266 (267)
146 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.7E-35 1.7E-39 328.7 20.7 268 802-1080 6-290 (309)
147 cd05575 STKc_SGK Catalytic dom 100.0 2.8E-35 6.1E-40 334.1 17.2 244 808-1076 1-251 (323)
148 cd05111 PTK_HER3 Pseudokinase 100.0 2.4E-34 5.3E-39 319.5 24.0 258 802-1083 7-271 (279)
149 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-34 2.3E-39 323.3 21.1 266 804-1081 6-282 (283)
150 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-34 2.5E-39 324.1 21.2 267 803-1076 1-285 (288)
151 cd05598 STKc_LATS Catalytic do 100.0 2.4E-35 5.2E-40 342.2 16.3 256 802-1078 1-303 (376)
152 PRK13184 pknD serine/threonine 100.0 1.8E-34 3.9E-39 349.8 24.5 265 802-1084 2-294 (932)
153 KOG0444 Cytoskeletal regulator 100.0 1.6E-37 3.4E-42 339.8 -2.0 361 316-686 11-375 (1255)
154 cd05034 PTKc_Src_like Catalyti 100.0 1E-34 2.2E-39 319.4 20.5 255 801-1079 5-260 (261)
155 cd05093 PTKc_TrkB Catalytic do 100.0 1.4E-34 3E-39 323.2 21.5 261 802-1084 5-283 (288)
156 cd05632 STKc_GRK5 Catalytic do 100.0 3.1E-34 6.7E-39 319.7 24.2 255 804-1078 2-263 (285)
157 cd05089 PTKc_Tie1 Catalytic do 100.0 2.5E-34 5.5E-39 322.5 23.5 262 802-1086 2-281 (297)
158 KOG0199 ACK and related non-re 100.0 1.1E-35 2.3E-40 330.4 12.0 250 806-1078 114-370 (1039)
159 cd05116 PTKc_Syk Catalytic dom 100.0 2.3E-34 5E-39 315.8 22.6 248 809-1080 2-255 (257)
160 cd05094 PTKc_TrkC Catalytic do 100.0 2.7E-34 5.8E-39 321.4 23.4 261 802-1084 5-286 (291)
161 cd05090 PTKc_Ror1 Catalytic do 100.0 1.2E-34 2.7E-39 322.8 20.6 256 802-1078 5-281 (283)
162 cd05035 PTKc_Axl_like Catalyti 100.0 1.8E-34 4E-39 319.7 21.8 257 804-1080 1-272 (273)
163 cd05084 PTKc_Fes Catalytic dom 100.0 1.4E-34 3.1E-39 316.5 20.6 248 808-1078 1-251 (252)
164 cd07861 STKc_CDK1_euk Catalyti 100.0 2.9E-34 6.4E-39 320.2 23.6 269 803-1076 1-282 (285)
165 cd05085 PTKc_Fer Catalytic dom 100.0 1.6E-34 3.5E-39 315.7 20.9 248 808-1078 1-249 (250)
166 KOG0574 STE20-like serine/thre 100.0 5.6E-37 1.2E-41 309.0 1.4 249 804-1077 35-284 (502)
167 PTZ00266 NIMA-related protein 100.0 1.5E-34 3.3E-39 351.4 22.8 260 800-1078 11-297 (1021)
168 cd05597 STKc_DMPK_like Catalyt 100.0 5.9E-35 1.3E-39 332.4 17.7 259 802-1078 1-268 (331)
169 cd05055 PTKc_PDGFR Catalytic d 100.0 1.8E-34 3.9E-39 324.2 21.4 258 802-1080 35-301 (302)
170 cd05075 PTKc_Axl Catalytic dom 100.0 1.6E-34 3.6E-39 319.9 20.8 257 804-1080 1-271 (272)
171 cd06654 STKc_PAK1 Catalytic do 100.0 2.6E-34 5.6E-39 322.1 22.5 254 802-1080 20-274 (296)
172 KOG0444 Cytoskeletal regulator 100.0 1.9E-37 4.1E-42 339.2 -3.1 365 216-613 7-375 (1255)
173 cd05615 STKc_cPKC_alpha Cataly 100.0 9.2E-35 2E-39 329.6 18.8 249 803-1076 1-257 (323)
174 cd08229 STKc_Nek7 Catalytic do 100.0 2.7E-34 5.8E-39 317.2 22.0 261 802-1080 2-265 (267)
175 cd05630 STKc_GRK6 Catalytic do 100.0 3.6E-34 7.7E-39 319.1 23.0 257 804-1080 2-265 (285)
176 PTZ00036 glycogen synthase kin 100.0 7.6E-35 1.7E-39 342.7 18.5 265 801-1080 65-355 (440)
177 cd05604 STKc_SGK3 Catalytic do 100.0 4.2E-35 9.2E-40 333.0 15.8 239 808-1071 1-242 (325)
178 cd05043 PTK_Ryk Pseudokinase d 100.0 2.2E-34 4.8E-39 320.3 21.3 261 801-1082 5-278 (280)
179 cd06619 PKc_MKK5 Catalytic dom 100.0 3E-34 6.5E-39 318.9 22.2 253 803-1081 2-258 (279)
180 PF00069 Pkinase: Protein kina 100.0 3.6E-35 7.8E-40 322.8 14.5 255 804-1076 1-257 (260)
181 cd05602 STKc_SGK1 Catalytic do 100.0 5.7E-35 1.2E-39 331.9 16.6 240 808-1072 1-243 (325)
182 cd05045 PTKc_RET Catalytic dom 100.0 3.2E-34 6.8E-39 320.7 22.2 259 803-1082 1-288 (290)
183 cd05603 STKc_SGK2 Catalytic do 100.0 4.3E-35 9.3E-40 332.5 15.4 244 808-1076 1-251 (321)
184 cd07847 STKc_CDKL1_4 Catalytic 100.0 3E-34 6.4E-39 320.4 21.8 267 802-1076 1-283 (286)
185 cd05112 PTKc_Itk Catalytic dom 100.0 4.5E-34 9.8E-39 313.3 22.7 251 802-1077 4-255 (256)
186 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.4E-34 5.3E-39 329.1 21.2 262 802-1083 7-342 (343)
187 cd05073 PTKc_Hck Catalytic dom 100.0 3.4E-34 7.3E-39 315.0 21.5 254 801-1079 5-259 (260)
188 cd05053 PTKc_FGFR Catalytic do 100.0 2.3E-34 4.9E-39 322.5 20.4 260 801-1081 11-292 (293)
189 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.3E-34 1.6E-38 314.0 23.9 256 802-1080 5-267 (268)
190 cd06644 STKc_STK10_LOK Catalyt 100.0 2.1E-34 4.7E-39 322.4 19.9 254 802-1078 12-271 (292)
191 cd05109 PTKc_HER2 Catalytic do 100.0 4E-34 8.6E-39 318.0 21.9 259 802-1084 7-272 (279)
192 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.1E-34 8.9E-39 324.9 22.4 249 808-1077 1-261 (327)
193 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.5E-34 1.4E-38 320.5 23.8 263 801-1084 14-300 (304)
194 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-34 2.7E-39 332.0 18.3 268 799-1081 12-303 (343)
195 cd08227 PK_STRAD_alpha Pseudok 100.0 2.1E-34 4.5E-39 327.8 19.9 271 806-1080 2-311 (327)
196 cd05623 STKc_MRCK_alpha Cataly 100.0 1E-34 2.2E-39 330.8 17.3 258 802-1077 1-267 (332)
197 cd06637 STKc_TNIK Catalytic do 100.0 1.7E-34 3.8E-39 319.7 18.7 253 800-1076 4-269 (272)
198 cd05061 PTKc_InsR Catalytic do 100.0 2.2E-34 4.7E-39 321.6 19.6 261 800-1081 4-279 (288)
199 cd05624 STKc_MRCK_beta Catalyt 100.0 7.5E-35 1.6E-39 331.5 16.1 258 802-1077 1-267 (331)
200 cd05097 PTKc_DDR_like Catalyti 100.0 4.7E-34 1E-38 320.1 22.2 263 802-1078 5-294 (295)
201 cd06631 STKc_YSK4 Catalytic do 100.0 6.5E-34 1.4E-38 313.8 23.0 253 803-1076 1-262 (265)
202 cd05051 PTKc_DDR Catalytic dom 100.0 4.6E-34 1E-38 320.5 22.2 263 802-1078 5-295 (296)
203 cd05088 PTKc_Tie2 Catalytic do 100.0 2.7E-34 5.8E-39 323.1 20.2 265 802-1089 7-289 (303)
204 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.3E-34 1.4E-38 321.0 23.3 262 802-1084 18-303 (307)
205 cd05066 PTKc_EphR_A Catalytic 100.0 6.7E-34 1.5E-38 314.0 23.0 256 802-1080 4-266 (267)
206 cd08221 STKc_Nek9 Catalytic do 100.0 1E-33 2.2E-38 310.5 24.1 253 803-1077 1-254 (256)
207 cd05115 PTKc_Zap-70 Catalytic 100.0 1E-33 2.2E-38 310.4 23.8 249 809-1081 2-256 (257)
208 cd08223 STKc_Nek4 Catalytic do 100.0 1E-33 2.2E-38 310.7 23.7 252 803-1076 1-254 (257)
209 cd05100 PTKc_FGFR3 Catalytic d 100.0 1E-33 2.2E-38 323.1 24.5 262 802-1084 12-297 (334)
210 cd08219 STKc_Nek3 Catalytic do 100.0 7.5E-34 1.6E-38 311.3 22.5 251 803-1076 1-252 (255)
211 cd05627 STKc_NDR2 Catalytic do 100.0 1.3E-34 2.8E-39 333.8 17.3 256 802-1078 1-295 (360)
212 PHA03207 serine/threonine kina 100.0 5.9E-34 1.3E-38 331.6 22.9 266 801-1081 91-380 (392)
213 cd05091 PTKc_Ror2 Catalytic do 100.0 4.1E-34 8.8E-39 318.7 20.3 256 803-1079 6-282 (283)
214 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.7E-34 1.7E-38 316.6 22.4 265 802-1080 4-283 (284)
215 cd06615 PKc_MEK Catalytic doma 100.0 8.8E-34 1.9E-38 319.7 22.8 271 802-1082 1-293 (308)
216 PTZ00284 protein kinase; Provi 100.0 6E-34 1.3E-38 339.3 22.6 267 799-1081 126-443 (467)
217 PHA03211 serine/threonine kina 100.0 6.6E-34 1.4E-38 332.7 22.4 263 802-1078 169-457 (461)
218 cd06655 STKc_PAK2 Catalytic do 100.0 7.5E-34 1.6E-38 318.2 21.9 254 802-1080 19-273 (296)
219 cd05095 PTKc_DDR2 Catalytic do 100.0 1.1E-33 2.4E-38 317.2 23.3 263 802-1078 5-295 (296)
220 cd05060 PTKc_Syk_like Catalyti 100.0 8.8E-34 1.9E-38 311.2 21.8 249 808-1081 1-256 (257)
221 cd06613 STKc_MAP4K3_like Catal 100.0 9.8E-34 2.1E-38 311.8 22.2 254 802-1076 3-260 (262)
222 cd07868 STKc_CDK8 Catalytic do 100.0 1.3E-33 2.7E-38 320.2 23.7 196 807-1010 6-219 (317)
223 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-33 2.3E-38 312.4 22.4 251 803-1076 1-264 (267)
224 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-33 2.3E-38 313.0 22.3 258 802-1083 6-268 (270)
225 cd05032 PTKc_InsR_like Catalyt 100.0 3.8E-34 8.3E-39 317.9 18.8 256 802-1078 6-276 (277)
226 cd08218 STKc_Nek1 Catalytic do 100.0 1.1E-33 2.4E-38 310.2 22.2 252 803-1076 1-253 (256)
227 cd05082 PTKc_Csk Catalytic dom 100.0 1.5E-33 3.3E-38 309.1 23.3 248 802-1079 6-255 (256)
228 cd06645 STKc_MAP4K3 Catalytic 100.0 3.8E-34 8.3E-39 316.0 18.6 253 802-1076 9-265 (267)
229 PHA03209 serine/threonine kina 100.0 5E-34 1.1E-38 328.0 20.1 193 799-1007 63-256 (357)
230 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.1E-33 2.5E-38 313.9 22.3 257 801-1078 5-276 (277)
231 cd05039 PTKc_Csk_like Catalyti 100.0 2E-33 4.3E-38 308.2 23.9 249 802-1079 6-255 (256)
232 cd06656 STKc_PAK3 Catalytic do 100.0 7.6E-34 1.7E-38 318.4 20.9 254 802-1080 19-273 (297)
233 cd07833 STKc_CDKL Catalytic do 100.0 5.1E-34 1.1E-38 318.8 19.1 268 802-1076 1-285 (288)
234 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-33 2.6E-38 315.7 22.1 258 801-1079 4-288 (288)
235 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-33 3.1E-38 311.4 22.3 259 802-1076 1-264 (267)
236 cd05065 PTKc_EphR_B Catalytic 100.0 1.5E-33 3.2E-38 311.7 22.4 256 802-1080 4-268 (269)
237 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.4E-33 3E-38 315.0 22.4 261 803-1083 2-269 (286)
238 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.6E-33 3.4E-38 318.7 23.1 263 802-1085 12-298 (314)
239 cd06626 STKc_MEKK4 Catalytic d 100.0 1.9E-33 4.2E-38 309.8 23.2 254 803-1076 1-261 (264)
240 cd05092 PTKc_TrkA Catalytic do 100.0 5.3E-34 1.1E-38 317.1 18.8 255 802-1078 5-279 (280)
241 cd06638 STKc_myosinIIIA Cataly 100.0 6.7E-34 1.5E-38 317.5 19.6 261 796-1078 12-285 (286)
242 cd06612 STKc_MST1_2 Catalytic 100.0 8.5E-34 1.8E-38 311.1 20.0 250 802-1076 3-253 (256)
243 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-33 2.8E-38 310.5 21.4 239 808-1077 1-261 (262)
244 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.5E-34 1.8E-38 319.0 20.4 267 802-1080 6-290 (301)
245 KOG0666 Cyclin C-dependent kin 100.0 1.7E-34 3.8E-39 293.2 13.2 282 799-1084 21-345 (438)
246 cd06643 STKc_SLK Catalytic dom 100.0 1E-33 2.2E-38 315.3 20.8 254 804-1080 7-266 (282)
247 cd05047 PTKc_Tie Catalytic dom 100.0 1.1E-33 2.4E-38 312.7 20.9 250 809-1081 2-269 (270)
248 cd07832 STKc_CCRK Catalytic do 100.0 1.2E-33 2.5E-38 315.6 21.2 268 803-1077 1-283 (286)
249 cd05046 PTK_CCK4 Pseudokinase 100.0 9.6E-34 2.1E-38 314.3 20.3 257 802-1078 5-274 (275)
250 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.7E-33 3.8E-38 311.1 22.2 254 808-1078 1-268 (269)
251 cd05058 PTKc_Met_Ron Catalytic 100.0 1.7E-33 3.6E-38 310.0 21.9 251 808-1081 1-260 (262)
252 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 9.4E-34 2E-38 315.8 20.1 260 802-1080 4-283 (284)
253 cd05040 PTKc_Ack_like Catalyti 100.0 1E-33 2.3E-38 310.6 20.1 249 808-1078 1-256 (257)
254 cd07839 STKc_CDK5 Catalytic do 100.0 8.2E-34 1.8E-38 316.4 19.5 264 803-1077 1-282 (284)
255 cd06651 STKc_MEKK3 Catalytic d 100.0 1.8E-33 3.8E-38 310.5 21.8 253 802-1077 2-262 (266)
256 cd06624 STKc_ASK Catalytic dom 100.0 2.4E-33 5.3E-38 309.7 22.9 256 800-1076 6-265 (268)
257 KOG0579 Ste20-like serine/thre 100.0 2.4E-35 5.2E-40 322.9 6.4 252 803-1077 33-290 (1187)
258 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.4E-33 3E-38 314.5 20.6 259 802-1081 5-271 (284)
259 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.9E-34 1.1E-38 318.6 17.0 267 802-1076 1-283 (286)
260 cd06639 STKc_myosinIIIB Cataly 100.0 1.4E-33 3E-38 315.7 20.6 263 792-1076 12-287 (291)
261 cd05110 PTKc_HER4 Catalytic do 100.0 2E-33 4.4E-38 316.1 22.0 259 802-1084 7-272 (303)
262 cd06611 STKc_SLK_like Catalyti 100.0 9.6E-34 2.1E-38 315.2 18.6 255 802-1079 5-265 (280)
263 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-33 4E-38 311.8 20.8 254 802-1080 1-255 (274)
264 cd06640 STKc_MST4 Catalytic do 100.0 4.1E-33 8.8E-38 309.5 23.5 253 802-1080 4-257 (277)
265 cd06632 STKc_MEKK1_plant Catal 100.0 2.3E-33 5E-38 308.0 21.2 250 803-1076 1-255 (258)
266 cd08220 STKc_Nek8 Catalytic do 100.0 2.1E-33 4.5E-38 308.0 20.7 251 803-1076 1-253 (256)
267 cd05041 PTKc_Fes_like Catalyti 100.0 3.1E-33 6.7E-38 305.7 22.0 248 808-1078 1-250 (251)
268 cd05042 PTKc_Aatyk Catalytic d 100.0 1.7E-33 3.6E-38 311.3 19.8 252 809-1077 2-267 (269)
269 KOG0596 Dual specificity; seri 100.0 5.3E-34 1.2E-38 310.9 15.5 257 800-1077 359-628 (677)
270 cd07860 STKc_CDK2_3 Catalytic 100.0 1.6E-33 3.4E-38 314.2 19.8 265 803-1076 1-281 (284)
271 cd05586 STKc_Sck1_like Catalyt 100.0 4.4E-34 9.6E-39 325.5 15.6 245 810-1078 1-255 (330)
272 cd05057 PTKc_EGFR_like Catalyt 100.0 3.6E-33 7.7E-38 310.4 22.5 259 802-1084 7-272 (279)
273 cd00192 PTKc Catalytic domain 100.0 5.5E-33 1.2E-37 305.6 23.6 249 808-1077 1-261 (262)
274 cd07867 STKc_CDC2L6 Catalytic 100.0 6.4E-33 1.4E-37 314.6 24.5 196 807-1010 6-219 (317)
275 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.7E-33 1.4E-37 310.2 24.1 266 800-1076 3-288 (291)
276 cd06652 STKc_MEKK2 Catalytic d 100.0 4.1E-33 8.9E-38 307.4 22.0 253 802-1077 2-262 (265)
277 cd08217 STKc_Nek2 Catalytic do 100.0 3.5E-33 7.7E-38 307.7 21.5 256 803-1076 1-262 (265)
278 KOG0200 Fibroblast/platelet-de 100.0 1.1E-33 2.3E-38 342.4 18.8 261 802-1082 296-581 (609)
279 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.2E-33 7E-38 311.6 21.3 261 802-1080 4-283 (284)
280 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2E-33 4.4E-38 312.9 19.6 258 795-1076 9-279 (282)
281 cd06629 STKc_MAPKKK_Bck1_like 100.0 3E-33 6.4E-38 309.8 20.7 256 803-1076 2-269 (272)
282 cd08528 STKc_Nek10 Catalytic d 100.0 3.5E-33 7.5E-38 308.7 21.1 256 803-1078 1-268 (269)
283 cd07841 STKc_CDK7 Catalytic do 100.0 5E-33 1.1E-37 312.5 22.5 268 803-1080 1-286 (298)
284 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.3E-33 2.8E-38 313.6 17.5 251 803-1079 5-256 (277)
285 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5E-33 1.1E-37 305.6 21.9 237 808-1077 1-258 (259)
286 cd07844 STKc_PCTAIRE_like Cata 100.0 6.8E-33 1.5E-37 310.2 23.3 263 802-1076 5-288 (291)
287 cd05574 STKc_phototropin_like 100.0 3.5E-33 7.5E-38 316.5 21.0 258 802-1079 1-292 (316)
288 KOG4645 MAPKKK (MAP kinase kin 100.0 4.7E-35 1E-39 347.3 5.9 257 801-1079 1234-1497(1509)
289 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.3E-33 9.2E-38 307.7 21.0 252 809-1077 2-266 (268)
290 KOG0586 Serine/threonine prote 100.0 1.1E-33 2.4E-38 315.3 15.8 255 801-1081 55-311 (596)
291 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.5E-33 1.4E-37 309.0 22.2 259 802-1082 1-267 (283)
292 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.3E-33 9.4E-38 308.4 20.6 238 809-1077 2-273 (274)
293 cd07850 STKc_JNK Catalytic dom 100.0 5.5E-33 1.2E-37 319.6 22.1 266 800-1080 14-315 (353)
294 cd06605 PKc_MAPKK Catalytic do 100.0 3.9E-33 8.4E-38 307.6 20.1 256 803-1079 2-260 (265)
295 cd06630 STKc_MEKK1 Catalytic d 100.0 8E-33 1.7E-37 305.6 22.4 255 803-1076 1-264 (268)
296 cd05083 PTKc_Chk Catalytic dom 100.0 7.3E-33 1.6E-37 303.3 21.8 247 802-1079 6-253 (254)
297 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-33 5.2E-38 313.5 18.0 253 804-1081 24-277 (292)
298 cd06608 STKc_myosinIII_like Ca 100.0 5.6E-33 1.2E-37 308.0 20.6 255 800-1076 4-272 (275)
299 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.1E-32 2.4E-37 305.4 22.5 257 804-1080 1-272 (273)
300 cd07845 STKc_CDK10 Catalytic d 100.0 7.2E-33 1.6E-37 312.7 21.4 271 801-1081 6-295 (309)
301 cd06623 PKc_MAPKK_plant_like C 100.0 1.6E-32 3.5E-37 302.4 23.7 254 803-1078 2-258 (264)
302 cd06659 STKc_PAK6 Catalytic do 100.0 4E-33 8.6E-38 312.5 19.0 251 806-1081 25-276 (297)
303 cd05580 STKc_PKA Catalytic dom 100.0 9.5E-33 2.1E-37 308.7 21.9 249 802-1078 1-256 (290)
304 cd06647 STKc_PAK_I Catalytic d 100.0 6.9E-33 1.5E-37 310.0 20.5 254 802-1080 19-273 (293)
305 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-32 2.5E-37 310.6 22.2 253 802-1081 15-272 (307)
306 cd07843 STKc_CDC2L1 Catalytic 100.0 6.8E-33 1.5E-37 310.5 20.2 265 802-1076 5-290 (293)
307 cd05609 STKc_MAST Catalytic do 100.0 1E-32 2.3E-37 310.7 21.8 254 803-1077 2-271 (305)
308 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-32 2.6E-37 307.0 22.0 265 803-1076 1-281 (284)
309 smart00219 TyrKc Tyrosine kina 100.0 2E-32 4.4E-37 300.4 23.3 252 804-1077 1-258 (258)
310 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3E-33 6.4E-38 307.1 16.6 239 808-1077 1-257 (258)
311 cd08225 STKc_Nek5 Catalytic do 100.0 5.6E-33 1.2E-37 304.8 18.7 252 803-1076 1-254 (257)
312 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.4E-32 3E-37 306.9 22.1 264 802-1079 1-269 (287)
313 cd06641 STKc_MST3 Catalytic do 100.0 1.5E-32 3.3E-37 304.9 22.2 251 803-1079 5-256 (277)
314 KOG4250 TANK binding protein k 100.0 1.6E-33 3.6E-38 317.6 14.2 274 803-1082 14-312 (732)
315 KOG0584 Serine/threonine prote 100.0 8E-34 1.7E-38 316.4 11.5 251 806-1080 44-300 (632)
316 cd05044 PTKc_c-ros Catalytic d 100.0 1.4E-32 3E-37 304.0 21.4 250 808-1078 1-268 (269)
317 cd07837 STKc_CdkB_plant Cataly 100.0 1E-32 2.3E-37 309.4 20.3 267 802-1076 1-291 (295)
318 PHA03210 serine/threonine kina 100.0 6.9E-33 1.5E-37 331.0 19.9 275 800-1079 146-457 (501)
319 cd07835 STKc_CDK1_like Catalyt 100.0 8.5E-33 1.8E-37 308.1 19.2 264 804-1076 1-280 (283)
320 cd07864 STKc_CDK12 Catalytic d 100.0 1.5E-32 3.2E-37 309.3 21.2 268 799-1076 4-299 (302)
321 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-32 3.8E-37 310.8 21.7 270 803-1076 1-313 (316)
322 cd07840 STKc_CDK9_like Catalyt 100.0 2E-32 4.3E-37 305.8 21.6 264 804-1076 1-284 (287)
323 cd05578 STKc_Yank1 Catalytic d 100.0 7.7E-33 1.7E-37 303.9 18.0 250 803-1075 1-254 (258)
324 PHA02882 putative serine/threo 100.0 3.3E-32 7.1E-37 304.6 23.3 259 802-1077 12-293 (294)
325 cd05577 STKc_GRK Catalytic dom 100.0 2.8E-32 6E-37 302.8 22.3 250 810-1079 1-257 (277)
326 cd06635 STKc_TAO1 Catalytic do 100.0 3.6E-32 7.7E-37 308.0 23.5 254 804-1084 27-285 (317)
327 cd06648 STKc_PAK_II Catalytic 100.0 3.2E-32 7E-37 303.4 22.8 250 803-1077 20-270 (285)
328 cd06917 STKc_NAK1_like Catalyt 100.0 2.1E-32 4.5E-37 303.9 21.0 252 803-1079 2-258 (277)
329 PLN00009 cyclin-dependent kina 100.0 1.9E-32 4.1E-37 307.1 20.7 268 802-1078 2-286 (294)
330 KOG0983 Mitogen-activated prot 100.0 3E-33 6.4E-38 279.5 12.3 253 803-1077 93-350 (391)
331 cd06614 STKc_PAK Catalytic dom 100.0 2.9E-32 6.3E-37 304.2 21.7 258 800-1081 17-275 (286)
332 cd05613 STKc_MSK1_N N-terminal 100.0 4.7E-32 1E-36 303.2 22.8 255 803-1077 1-269 (290)
333 cd07831 STKc_MOK Catalytic dom 100.0 2.6E-32 5.5E-37 304.1 20.5 259 804-1076 1-279 (282)
334 cd07852 STKc_MAPK15 Catalytic 100.0 2.4E-32 5.3E-37 312.3 20.6 268 800-1078 5-297 (337)
335 KOG0986 G protein-coupled rece 100.0 3.5E-33 7.5E-38 297.4 12.5 257 801-1077 184-447 (591)
336 cd08226 PK_STRAD_beta Pseudoki 100.0 3.5E-32 7.6E-37 309.6 21.6 267 809-1083 5-315 (328)
337 cd05583 STKc_MSK_N N-terminal 100.0 3.3E-32 7.1E-37 304.1 20.8 258 803-1080 1-267 (288)
338 cd05122 PKc_STE Catalytic doma 100.0 7.3E-32 1.6E-36 294.7 22.8 250 803-1076 1-251 (253)
339 cd07838 STKc_CDK4_6_like Catal 100.0 6E-32 1.3E-36 301.9 22.5 266 804-1076 1-284 (287)
340 cd07865 STKc_CDK9 Catalytic do 100.0 3.7E-32 8E-37 307.3 20.9 267 801-1076 11-307 (310)
341 cd06616 PKc_MKK4 Catalytic dom 100.0 2E-32 4.4E-37 305.9 18.4 259 803-1080 5-271 (288)
342 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.9E-32 4E-37 313.0 18.4 268 801-1079 4-294 (337)
343 KOG1035 eIF-2alpha kinase GCN2 100.0 3.7E-33 7.9E-38 330.0 12.7 253 802-1076 479-871 (1351)
344 cd05118 STKc_CMGC Catalytic do 100.0 3.3E-32 7.1E-37 303.4 19.8 263 804-1076 1-280 (283)
345 cd06627 STKc_Cdc7_like Catalyt 100.0 1.3E-31 2.8E-36 293.3 23.9 250 803-1076 1-251 (254)
346 PHA03390 pk1 serine/threonine- 100.0 1.4E-31 3E-36 295.2 24.3 247 797-1076 9-262 (267)
347 cd05633 STKc_GRK3 Catalytic do 100.0 7.5E-32 1.6E-36 299.4 22.3 248 809-1080 1-259 (279)
348 cd07855 STKc_ERK5 Catalytic do 100.0 2.3E-32 5E-37 312.0 18.5 273 802-1084 5-302 (334)
349 cd07849 STKc_ERK1_2_like Catal 100.0 6.2E-32 1.3E-36 308.7 21.9 268 801-1080 4-296 (336)
350 KOG0612 Rho-associated, coiled 100.0 8.6E-34 1.9E-38 332.4 6.7 269 795-1084 68-346 (1317)
351 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.8E-32 1.5E-36 297.5 21.4 252 802-1076 2-261 (264)
352 cd08215 STKc_Nek Catalytic dom 100.0 6.6E-32 1.4E-36 296.2 21.0 253 803-1076 1-255 (258)
353 cd05572 STKc_cGK_PKG Catalytic 100.0 1.3E-31 2.8E-36 295.0 23.2 248 810-1079 1-255 (262)
354 cd08216 PK_STRAD Pseudokinase 100.0 6E-32 1.3E-36 306.1 20.4 269 807-1080 7-299 (314)
355 cd08530 STKc_CNK2-like Catalyt 100.0 8.2E-32 1.8E-36 295.3 20.8 251 803-1076 1-253 (256)
356 cd06606 STKc_MAPKKK Catalytic 100.0 1.8E-31 3.9E-36 292.9 23.4 253 803-1076 1-257 (260)
357 cd07879 STKc_p38delta_MAPK13 C 100.0 1.7E-31 3.7E-36 305.6 23.6 264 801-1081 14-304 (342)
358 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-31 2.3E-36 306.3 21.8 268 803-1081 1-294 (330)
359 KOG0662 Cyclin-dependent kinas 100.0 2.2E-32 4.8E-37 256.4 12.7 264 803-1077 3-284 (292)
360 cd06657 STKc_PAK4 Catalytic do 100.0 1.1E-31 2.3E-36 300.1 20.6 250 808-1082 26-276 (292)
361 cd07877 STKc_p38alpha_MAPK14 C 100.0 9E-32 2E-36 308.1 20.5 271 795-1080 10-304 (345)
362 KOG0690 Serine/threonine prote 100.0 4.3E-33 9.3E-38 284.0 8.0 253 801-1078 167-426 (516)
363 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-31 3.3E-36 299.9 21.0 257 802-1080 15-277 (296)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 2E-31 4.4E-36 304.9 22.1 265 800-1080 13-302 (343)
365 cd07866 STKc_BUR1 Catalytic do 100.0 1.4E-31 3E-36 302.7 20.2 269 801-1076 7-308 (311)
366 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.6E-31 3.4E-36 303.7 20.6 268 798-1080 6-292 (328)
367 cd06634 STKc_TAO2 Catalytic do 100.0 1.2E-31 2.6E-36 302.3 19.3 252 803-1081 16-272 (308)
368 cd05606 STKc_beta_ARK Catalyti 100.0 4.6E-31 1E-35 293.0 23.3 248 809-1080 1-259 (278)
369 KOG0671 LAMMER dual specificit 100.0 1.1E-32 2.5E-37 289.5 9.7 266 801-1081 88-411 (415)
370 KOG0604 MAP kinase-activated p 100.0 2.1E-32 4.5E-37 277.1 11.1 257 801-1083 60-329 (400)
371 cd06633 STKc_TAO3 Catalytic do 100.0 4E-31 8.6E-36 298.7 22.7 248 804-1078 23-275 (313)
372 cd05581 STKc_PDK1 Catalytic do 100.0 5.8E-32 1.3E-36 300.8 15.6 251 802-1076 1-277 (280)
373 cd05611 STKc_Rim15_like Cataly 100.0 3.3E-31 7.2E-36 291.3 21.1 245 808-1077 2-252 (260)
374 PTZ00024 cyclin-dependent prot 100.0 2.4E-31 5.3E-36 303.9 20.7 269 802-1080 8-317 (335)
375 cd07830 STKc_MAK_like Catalyti 100.0 2.5E-31 5.4E-36 296.3 20.0 264 804-1076 1-280 (283)
376 KOG0607 MAP kinase-interacting 100.0 1.2E-32 2.6E-37 280.6 7.7 265 793-1079 74-364 (463)
377 KOG1151 Tousled-like protein k 100.0 2.9E-32 6.3E-37 288.0 10.6 257 802-1076 463-741 (775)
378 cd05579 STKc_MAST_like Catalyt 100.0 1.3E-31 2.9E-36 295.1 16.4 246 810-1077 1-255 (265)
379 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-30 2.8E-35 297.3 24.8 266 803-1079 1-295 (332)
380 KOG1024 Receptor-like protein 100.0 6.7E-32 1.5E-36 282.1 12.9 267 795-1082 277-557 (563)
381 cd07829 STKc_CDK_like Catalyti 100.0 3.7E-31 8E-36 294.7 19.6 265 804-1076 1-279 (282)
382 cd07851 STKc_p38 Catalytic dom 100.0 1.5E-31 3.3E-36 306.1 16.4 265 800-1080 13-302 (343)
383 KOG4236 Serine/threonine prote 100.0 2.1E-32 4.7E-37 294.7 8.4 249 807-1078 569-821 (888)
384 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-30 2.8E-35 320.9 24.1 147 802-954 4-152 (669)
385 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.5E-31 1.2E-35 301.4 18.8 268 802-1079 5-303 (342)
386 cd08222 STKc_Nek11 Catalytic d 100.0 7.2E-31 1.6E-35 288.6 19.0 252 803-1076 1-257 (260)
387 KOG1006 Mitogen-activated prot 100.0 8.2E-33 1.8E-37 275.6 2.3 260 805-1081 67-332 (361)
388 KOG0696 Serine/threonine prote 100.0 1.2E-31 2.7E-36 281.2 9.9 242 802-1068 349-593 (683)
389 KOG1290 Serine/threonine prote 100.0 1.2E-30 2.7E-35 280.8 16.9 269 801-1080 77-554 (590)
390 cd05123 STKc_AGC Catalytic dom 100.0 2.9E-30 6.3E-35 282.0 20.2 242 810-1076 1-247 (250)
391 KOG0587 Traf2- and Nck-interac 100.0 1.3E-30 2.8E-35 299.4 18.0 253 800-1076 17-282 (953)
392 KOG0669 Cyclin T-dependent kin 100.0 2.4E-32 5.2E-37 269.7 2.0 273 802-1081 17-320 (376)
393 KOG0603 Ribosomal protein S6 k 100.0 2.5E-30 5.3E-35 290.2 17.0 243 801-1079 321-566 (612)
394 cd05576 STKc_RPK118_like Catal 100.0 4.2E-30 9.1E-35 278.0 16.7 219 813-1070 4-223 (237)
395 KOG0614 cGMP-dependent protein 100.0 5.2E-31 1.1E-35 283.7 6.7 259 802-1084 420-685 (732)
396 PLN03225 Serine/threonine-prot 100.0 5E-29 1.1E-33 298.8 20.2 267 800-1080 130-454 (566)
397 KOG0664 Nemo-like MAPK-related 100.0 4E-31 8.8E-36 263.5 1.0 264 805-1078 56-345 (449)
398 smart00220 S_TKc Serine/Threon 100.0 1.5E-28 3.3E-33 266.6 19.1 240 814-1076 1-241 (244)
399 PLN03224 probable serine/threo 100.0 1.5E-28 3.3E-33 286.3 18.5 263 801-1079 144-503 (507)
400 KOG0984 Mitogen-activated prot 100.0 6.6E-29 1.4E-33 239.0 12.4 218 802-1028 46-270 (282)
401 KOG0695 Serine/threonine prote 100.0 3E-29 6.6E-34 256.6 10.4 257 800-1076 248-516 (593)
402 KOG1027 Serine/threonine prote 100.0 1.8E-29 3.9E-34 288.7 9.1 244 806-1076 513-767 (903)
403 KOG0608 Warts/lats-like serine 100.0 1.4E-28 3E-33 270.7 12.7 209 800-1014 627-878 (1034)
404 KOG0665 Jun-N-terminal kinase 100.0 1.3E-28 2.8E-33 253.0 10.8 262 802-1078 17-312 (369)
405 KOG0668 Casein kinase II, alph 100.0 1.8E-28 4E-33 239.1 10.1 264 801-1080 37-326 (338)
406 KOG0670 U4/U6-associated splic 99.9 6.7E-29 1.4E-33 268.2 6.0 268 798-1077 428-747 (752)
407 KOG1345 Serine/threonine kinas 99.9 1.3E-27 2.7E-32 239.2 10.2 250 802-1076 24-284 (378)
408 KOG1152 Signal transduction se 99.9 9.6E-28 2.1E-32 262.8 8.8 200 801-1009 560-771 (772)
409 cd00180 PKc Catalytic domain o 99.9 1.3E-25 2.8E-30 237.7 20.6 211 810-1076 1-214 (215)
410 KOG0576 Mitogen-activated prot 99.9 3.6E-27 7.7E-32 262.7 6.7 253 802-1076 15-271 (829)
411 smart00221 STYKc Protein kinas 99.9 3.9E-25 8.6E-30 236.9 19.1 200 804-1009 1-202 (225)
412 PLN03210 Resistant to P. syrin 99.9 7.5E-24 1.6E-28 275.7 25.5 306 290-611 591-904 (1153)
413 KOG4237 Extracellular matrix p 99.9 2.5E-26 5.5E-31 241.7 1.2 399 147-562 70-498 (498)
414 KOG4237 Extracellular matrix p 99.9 1.1E-26 2.3E-31 244.4 -1.8 426 224-683 54-498 (498)
415 KOG1167 Serine/threonine prote 99.9 3.9E-25 8.5E-30 236.6 9.8 266 799-1077 33-382 (418)
416 KOG0195 Integrin-linked kinase 99.9 7.8E-25 1.7E-29 218.7 5.9 254 803-1081 191-447 (448)
417 PLN03210 Resistant to P. syrin 99.9 3.9E-23 8.5E-28 269.0 23.4 339 281-635 551-903 (1153)
418 smart00750 KIND kinase non-cat 99.9 2.3E-23 5E-28 214.2 15.0 172 885-1083 1-172 (176)
419 PLN00181 protein SPA1-RELATED; 99.9 5E-24 1.1E-28 269.7 9.4 199 856-1079 28-268 (793)
420 KOG1164 Casein kinase (serine/ 99.9 3.5E-22 7.5E-27 225.4 22.3 262 803-1084 19-301 (322)
421 PRK15387 E3 ubiquitin-protein 99.9 7.5E-23 1.6E-27 246.2 16.2 261 362-691 203-463 (788)
422 PRK15387 E3 ubiquitin-protein 99.9 3.6E-22 7.9E-27 240.3 16.4 267 289-623 202-468 (788)
423 KOG1165 Casein kinase (serine/ 99.9 1.5E-21 3.3E-26 201.4 18.2 262 802-1084 28-303 (449)
424 KOG1163 Casein kinase (serine/ 99.9 7.3E-22 1.6E-26 194.9 13.7 202 800-1011 13-225 (341)
425 PRK09188 serine/threonine prot 99.9 6.9E-22 1.5E-26 221.0 15.2 167 800-982 16-195 (365)
426 PRK15370 E3 ubiquitin-protein 99.9 6.3E-22 1.4E-26 240.3 15.2 374 30-444 61-469 (754)
427 COG0515 SPS1 Serine/threonine 99.8 1.5E-19 3.2E-24 206.3 23.6 260 804-1076 2-275 (384)
428 PRK15370 E3 ubiquitin-protein 99.8 1.1E-20 2.4E-25 229.5 13.8 246 313-613 179-428 (754)
429 KOG0590 Checkpoint kinase and 99.8 2.2E-21 4.7E-26 231.6 6.0 261 805-1081 321-590 (601)
430 cd05147 RIO1_euk RIO kinase fa 99.8 1.4E-19 3.1E-24 186.5 11.5 142 807-957 2-168 (190)
431 PRK10359 lipopolysaccharide co 99.8 1.1E-19 2.3E-24 188.6 9.0 173 800-1001 29-216 (232)
432 KOG1240 Protein kinase contain 99.8 6.1E-20 1.3E-24 215.9 7.8 251 803-1079 24-294 (1431)
433 cd05145 RIO1_like RIO kinase f 99.8 1.5E-18 3.2E-23 179.9 14.2 142 807-957 2-168 (190)
434 KOG4158 BRPK/PTEN-induced prot 99.8 1E-18 2.2E-23 184.3 10.8 194 858-1076 274-510 (598)
435 KOG0617 Ras suppressor protein 99.8 2.4E-20 5.1E-25 174.7 -2.7 164 478-672 31-195 (264)
436 PRK12274 serine/threonine prot 99.8 5.8E-18 1.2E-22 171.4 14.2 188 806-1011 6-211 (218)
437 KOG0603 Ribosomal protein S6 k 99.8 1.7E-19 3.6E-24 203.5 2.8 187 810-1009 2-193 (612)
438 PF14531 Kinase-like: Kinase-l 99.7 6.1E-18 1.3E-22 180.8 12.1 235 803-1067 13-288 (288)
439 KOG1023 Natriuretic peptide re 99.7 7.8E-18 1.7E-22 191.1 13.6 220 854-1084 1-228 (484)
440 cd00116 LRR_RI Leucine-rich re 99.7 7E-20 1.5E-24 207.8 -3.9 207 100-326 2-235 (319)
441 cd00116 LRR_RI Leucine-rich re 99.7 5.5E-20 1.2E-24 208.7 -5.1 249 77-325 3-291 (319)
442 KOG0617 Ras suppressor protein 99.7 2.1E-19 4.5E-24 168.4 -0.5 167 527-699 32-199 (264)
443 KOG1166 Mitotic checkpoint ser 99.7 9.5E-18 2.1E-22 203.1 11.2 195 801-1006 697-902 (974)
444 PRK10345 hypothetical protein; 99.7 1.8E-16 3.8E-21 164.7 14.0 137 804-953 4-156 (210)
445 smart00090 RIO RIO-like kinase 99.7 3.2E-16 6.8E-21 167.3 13.3 148 799-957 25-199 (237)
446 PLN03150 hypothetical protein; 99.7 2.8E-16 6E-21 191.2 12.1 149 28-181 368-528 (623)
447 cd05144 RIO2_C RIO kinase fami 99.6 9.8E-16 2.1E-20 160.3 12.5 143 799-957 12-176 (198)
448 PRK14879 serine/threonine prot 99.6 1.6E-15 3.6E-20 160.7 13.1 136 808-955 2-143 (211)
449 PRK09605 bifunctional UGMP fam 99.6 3E-15 6.5E-20 180.6 16.2 139 802-956 333-477 (535)
450 KOG0606 Microtubule-associated 99.6 6.3E-16 1.4E-20 182.8 9.7 208 802-1069 83-305 (1205)
451 TIGR03724 arch_bud32 Kae1-asso 99.6 2.7E-15 5.8E-20 157.4 12.0 133 809-956 1-139 (199)
452 KOG1033 eIF-2alpha kinase PEK/ 99.6 4.3E-16 9.3E-21 172.9 5.0 175 874-1074 330-510 (516)
453 cd05119 RIO RIO kinase family, 99.5 2.3E-14 5E-19 148.7 11.7 138 807-957 2-165 (187)
454 cd05120 APH_ChoK_like Aminogly 99.5 3.7E-14 8.1E-19 141.5 11.1 135 806-955 2-138 (155)
455 KOG0532 Leucine-rich repeat (L 99.5 1.9E-15 4.2E-20 167.1 -1.5 192 481-683 76-270 (722)
456 PRK01723 3-deoxy-D-manno-octul 99.5 2.5E-13 5.3E-18 145.4 14.2 137 807-955 36-191 (239)
457 KOG0590 Checkpoint kinase and 99.5 6.1E-15 1.3E-19 176.5 -0.3 261 802-1081 20-291 (601)
458 PLN03150 hypothetical protein; 99.5 9.7E-14 2.1E-18 169.1 9.4 115 602-717 420-538 (623)
459 COG4886 Leucine-rich repeat (L 99.4 4E-13 8.6E-18 157.0 9.8 259 412-684 97-356 (394)
460 KOG0532 Leucine-rich repeat (L 99.4 1.4E-14 3E-19 160.4 -2.9 172 409-613 76-247 (722)
461 TIGR01982 UbiB 2-polyprenylphe 99.4 1.2E-11 2.7E-16 144.0 17.7 146 803-957 119-308 (437)
462 COG4886 Leucine-rich repeat (L 99.4 1E-12 2.3E-17 153.5 8.4 197 124-329 97-294 (394)
463 cd05146 RIO3_euk RIO kinase fa 99.2 9.3E-11 2E-15 119.5 13.3 138 808-957 3-175 (197)
464 KOG1266 Protein kinase [Signal 99.2 8.3E-12 1.8E-16 129.9 5.4 205 852-1077 119-332 (458)
465 KOG0601 Cyclin-dependent kinas 99.2 1.7E-11 3.6E-16 139.7 8.4 251 802-1076 114-379 (524)
466 PRK04750 ubiB putative ubiquin 99.2 3.1E-10 6.8E-15 133.3 18.3 147 800-957 118-315 (537)
467 KOG1259 Nischarin, modulator o 99.2 4.6E-12 1E-16 129.7 1.8 134 475-614 279-413 (490)
468 KOG1243 Protein kinase [Genera 99.2 4.1E-10 9E-15 129.2 15.5 168 822-1004 33-200 (690)
469 KOG1909 Ran GTPase-activating 99.2 1.7E-12 3.7E-17 136.7 -3.5 244 142-396 28-310 (382)
470 cd05151 ChoK Choline Kinase (C 99.2 1.1E-10 2.4E-15 118.9 9.8 127 808-955 4-136 (170)
471 KOG1259 Nischarin, modulator o 99.1 1.3E-11 2.8E-16 126.5 1.8 135 451-591 279-414 (490)
472 KOG0531 Protein phosphatase 1, 99.1 8E-12 1.7E-16 146.0 0.1 245 359-617 71-322 (414)
473 KOG0531 Protein phosphatase 1, 99.1 9.2E-12 2E-16 145.5 0.0 149 432-589 72-221 (414)
474 PF14580 LRR_9: Leucine-rich r 99.1 9.2E-11 2E-15 117.1 4.5 105 456-565 19-126 (175)
475 KOG1909 Ran GTPase-activating 99.1 6.7E-12 1.5E-16 132.3 -4.2 217 73-301 31-283 (382)
476 KOG0601 Cyclin-dependent kinas 99.0 1.1E-10 2.3E-15 133.3 4.6 252 799-1081 262-519 (524)
477 PF14580 LRR_9: Leucine-rich r 99.0 7.6E-11 1.7E-15 117.7 2.5 126 476-606 15-146 (175)
478 KOG3207 Beta-tubulin folding c 99.0 5.6E-11 1.2E-15 128.6 0.7 214 117-350 118-340 (505)
479 KOG3207 Beta-tubulin folding c 99.0 8.3E-11 1.8E-15 127.3 1.6 206 383-589 120-339 (505)
480 COG3642 Mn2+-dependent serine/ 99.0 2.6E-09 5.6E-14 104.3 11.6 134 808-956 2-141 (204)
481 KOG4658 Apoptotic ATPase [Sign 99.0 2.4E-10 5.2E-15 142.0 5.6 290 94-391 521-826 (889)
482 KOG3087 Serine/threonine prote 99.0 4.3E-09 9.3E-14 101.9 12.6 146 806-956 11-166 (229)
483 KOG4658 Apoptotic ATPase [Sign 99.0 6.6E-10 1.4E-14 138.2 7.3 86 188-274 567-652 (889)
484 PF08263 LRRNT_2: Leucine rich 99.0 5.8E-10 1.3E-14 83.6 4.0 40 31-70 2-43 (43)
485 cd05154 ACAD10_11_like Acyl-Co 98.9 5.5E-09 1.2E-13 111.6 12.4 143 808-955 4-206 (223)
486 KOG0606 Microtubule-associated 98.8 1.3E-09 2.8E-14 130.2 2.9 250 801-1071 803-1084(1205)
487 PF01163 RIO1: RIO1 family; I 98.8 4.4E-08 9.6E-13 99.7 12.5 128 817-957 1-157 (188)
488 COG4248 Uncharacterized protei 98.8 2.1E-07 4.6E-12 100.9 16.8 271 806-1091 15-311 (637)
489 PF13855 LRR_8: Leucine rich r 98.7 8.9E-09 1.9E-13 84.5 3.8 59 505-563 2-60 (61)
490 COG0478 RIO-like serine/threon 98.7 6.1E-08 1.3E-12 100.5 10.0 139 804-957 93-253 (304)
491 PF13855 LRR_8: Leucine rich r 98.7 1E-08 2.3E-13 84.1 3.3 59 481-539 2-60 (61)
492 KOG1859 Leucine-rich repeat pr 98.6 1.1E-09 2.4E-14 124.9 -5.0 127 480-613 164-292 (1096)
493 PRK15123 lipopolysaccharide co 98.6 3.5E-07 7.7E-12 99.0 14.2 143 808-955 28-194 (268)
494 KOG1859 Leucine-rich repeat pr 98.5 3.4E-09 7.4E-14 121.1 -5.2 181 497-688 102-294 (1096)
495 KOG3741 Poly(A) ribonuclease s 98.5 4.2E-06 9.1E-11 93.6 17.1 169 815-1006 289-475 (655)
496 KOG2120 SCF ubiquitin ligase, 98.5 4E-09 8.7E-14 108.7 -6.3 235 62-322 125-373 (419)
497 COG0661 AarF Predicted unusual 98.4 1.1E-06 2.3E-11 103.1 10.5 149 801-957 125-316 (517)
498 COG5238 RNA1 Ran GTPase-activa 98.4 2.3E-08 4.9E-13 101.9 -3.4 216 140-374 26-286 (388)
499 KOG4579 Leucine-rich repeat (L 98.4 2.5E-08 5.4E-13 91.4 -3.1 114 504-620 53-166 (177)
500 KOG4579 Leucine-rich repeat (L 98.4 3.3E-08 7.2E-13 90.6 -2.4 136 529-694 28-167 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.5e-118 Score=1156.42 Aligned_cols=945 Identities=34% Similarity=0.548 Sum_probs=636.1
Q ss_pred CcccccchhHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCccceeeecC-CeEEEEec
Q 001274 1 MARQGISSHTQKLFYFALIFCFSNVSVTSLTEEGVSLLEFKASLIDPSNNLESWNSSDMTPCNWIGVECTD-FKVTSVDL 79 (1109)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~all~~k~~~~~~~~~~~~W~~~~~~~c~w~gv~C~~-~~v~~l~l 79 (1109)
|||.|---+-. ++++.+++++.. ++. .++|+.||++||+++.||.+.+++|+.. .+||.|.||+|++ .+|+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~l~~~~~~~~~~~~~~~~w~~~-~~~c~w~gv~c~~~~~v~~L~L 76 (968)
T PLN00113 1 MAKKGPQHCPY-LIFMLFFLFLNF-SML-HAEELELLLSFKSSINDPLKYLSNWNSS-ADVCLWQGITCNNSSRVVSIDL 76 (968)
T ss_pred CCCCCCCCCCh-HHHHHHHHHHHc-cCC-CHHHHHHHHHHHHhCCCCcccCCCCCCC-CCCCcCcceecCCCCcEEEEEe
Confidence 67776544433 333333333322 222 4578999999999999998889999865 4899999999984 68999999
Q ss_pred cCccccccccccccCccccceeecccCccCCCCCcccc-CCCCCceEEccCCcccccCCchhhccccceEEEcccccccc
Q 001274 80 HGLNLSGILSPRICDLPRLVEFNISMNFVTGSIPTDLA-NCSSLEILDLCTNRLHGVIPFQLFFINTLRKLYLCENYIFG 158 (1109)
Q Consensus 80 ~~~~l~g~~~~~~~~l~~L~~L~ls~n~~~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 158 (1109)
++++++|.+++.+..+++|+.|+|++|.++|.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|+|++|.+++
T Consensus 77 ~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~ 154 (968)
T PLN00113 77 SGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSG 154 (968)
T ss_pred cCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccc
Confidence 99999999999999999999999999999998887755 888999999999988887775 446777777777777777
Q ss_pred cccccccCcCCCceEEeecCCCCCCCCcccccccccceeccccccccCCCCccccccccchhhhcccccccccCchhhhc
Q 001274 159 EIPEEIGNLTSLEELVIYSNNLTGAIPASISKLRQLRVIRAGHNSLSGPIPPEISECEGLEVLGLAQNSLEGFLPSELEK 238 (1109)
Q Consensus 159 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 238 (1109)
.+|..++++++|++|+|++|.+++.+|..++++++|++|++++|.+++.+|..++++++|++|+|++|.+++.+|..+++
T Consensus 155 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 234 (968)
T PLN00113 155 EIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG 234 (968)
T ss_pred cCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhc
Confidence 77777777777777777777777777777777777777777666666666666666666666666655555555555555
Q ss_pred cccccceecccccccCCCCCCccccccccceeeeeccceecCchhhhccCccceEEeecccccCccCcccCCCCcCcEEE
Q 001274 239 LRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPKELGKLSRLKKLYVYTNELNGTIPHELGNCTSAVEID 318 (1109)
Q Consensus 239 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 318 (1109)
+++|++|+|++|++++.+|..++++++|++|++++|++++.+|.. +.++++|++|+
T Consensus 235 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~------------------------l~~l~~L~~L~ 290 (968)
T PLN00113 235 LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPS------------------------IFSLQKLISLD 290 (968)
T ss_pred CCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchh------------------------HhhccCcCEEE
Confidence 555555555555555555555555555555555555554444444 44445555555
Q ss_pred ccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCcccCCCCcchhcccccceEEcccccccc
Q 001274 319 LSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDNHLEG 398 (1109)
Q Consensus 319 Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 398 (1109)
|++|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++++
T Consensus 291 Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~ 370 (968)
T PLN00113 291 LSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTG 370 (968)
T ss_pred CcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEe
Confidence 55555555555555555555555555555555666667777777778888888777777777777777777666666665
Q ss_pred cCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCCccccCCCCCCCccccccceeecccccccccCCccccC
Q 001274 399 TIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYN 478 (1109)
Q Consensus 399 ~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 478 (1109)
.+|..+..+++|+.|++++|++.+ .+ |..+.+
T Consensus 371 ~~p~~~~~~~~L~~L~l~~n~l~~------------------------~~------------------------p~~~~~ 402 (968)
T PLN00113 371 EIPEGLCSSGNLFKLILFSNSLEG------------------------EI------------------------PKSLGA 402 (968)
T ss_pred eCChhHhCcCCCCEEECcCCEecc------------------------cC------------------------CHHHhC
Confidence 444444333333333333333332 22 222333
Q ss_pred CcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeee
Q 001274 479 LQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLD 558 (1109)
Q Consensus 479 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 558 (1109)
+++|+.|+|++|++++..|..|..+++|+.|++++|++++.+|..+..+++|+.|+|++|++.+.+|..+ ..++|+.||
T Consensus 403 ~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ 481 (968)
T PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLD 481 (968)
T ss_pred CCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEE
Confidence 3334444444444444444444444455555555555555444444455555555555555555555433 234555666
Q ss_pred cCCCcCccCCCcccccccccceecccccccccccCcccCCCcccceeeccCccccccccccccccchhhhhhccCCcccc
Q 001274 559 LSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFSGSIPVALGQLTALQIALNISHNNLS 638 (1109)
Q Consensus 559 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~ 638 (1109)
|++|++++..|..|..+++|+.|+|++|++.+.+|..+.++++|++ |+|++|.++
T Consensus 482 ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~-------------------------L~Ls~N~l~ 536 (968)
T PLN00113 482 LSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVS-------------------------LDLSHNQLS 536 (968)
T ss_pred CcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCE-------------------------EECCCCccc
Confidence 6666655555555555555555555555555555555555554444 455555666
Q ss_pred ccccccccCccccceeecCCCccccCCchhhhccccceEEEccCcccccccCCCcccccccCCcccCCCCccccC-----
Q 001274 639 GVIPYELGNLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLSNNNLVGTVPNTTVFRRIDSSNFAGNRGLCMLG----- 713 (1109)
Q Consensus 639 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~~c~~~----- 713 (1109)
|.+|..|+.+++|+.|||++|+++|.+|..+..+.+|+.+++++|+++|.+|..++|.++...+|.||+.+||..
T Consensus 537 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~ 616 (968)
T PLN00113 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGL 616 (968)
T ss_pred ccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCC
Confidence 677777888899999999999999999999999999999999999999999999999999999999999999842
Q ss_pred CCcccCCCCCCCCCCccccCCCCccceeeeehhhHHHHHHHHHHH-hhhhceecCCCCCCccccCCcccccccCCCCCCC
Q 001274 714 SDCHQLMPPSHTPKKNWIKGGSTKEKLVSIISVIVGLISLSFIIG-ICWAMKCRKPAFVPLEEQKNPEVIDNYYFPKEGF 792 (1109)
Q Consensus 714 ~~c~~~~~p~~~~~~~~~~~~~~~~~~~~ii~~~~g~~~~~~i~~-~~~~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1109)
++|.. . .....+.+ ++++++++++++++++ ++++++.|+....+..+...... +...+.....
T Consensus 617 ~~c~~-------------~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 680 (968)
T PLN00113 617 PPCKR-------------V-RKTPSWWF-YITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTW-ELQFFDSKVS 680 (968)
T ss_pred CCCcc-------------c-cccceeee-ehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccc-cccccccccc
Confidence 12211 0 01112222 2233333332322222 22222222211111111111100 0001111111
Q ss_pred CHHHHHHHhcCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe
Q 001274 793 KYHNLLEATGNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH 871 (1109)
Q Consensus 793 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 871 (1109)
...........|...+.||+|+||+||+|++ .+++.||||+++.... ...+|++++++++|||||+++|+|.+
T Consensus 681 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~ 754 (968)
T PLN00113 681 KSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRS 754 (968)
T ss_pred hhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEc
Confidence 1112233345688889999999999999986 4789999998863221 12356889999999999999999999
Q ss_pred CCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 872 QDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 872 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
++..++||||+++|+|.++++. ++|..+.+++.||++|++|||+.++++|+||||||+||+++.++..++. ||
T Consensus 755 ~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~ 827 (968)
T PLN00113 755 EKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LS 827 (968)
T ss_pred CCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ec
Confidence 9999999999999999999963 7899999999999999999998778899999999999999999888875 66
Q ss_pred ccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcc-cCCcHHHHHHHhhhccCCC
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLE-LGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~ 1030 (1109)
.+..... .....+|+.|+|||++.+..++.++|||||||++|||+||+.||+... ......+|.+...... ..
T Consensus 828 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 901 (968)
T PLN00113 828 LPGLLCT-----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC-HL 901 (968)
T ss_pred ccccccc-----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc-ch
Confidence 5543221 122367899999999999999999999999999999999999996432 3445667766543322 23
Q ss_pred chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1031 SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
...+++.+........++..++.+++.+||+.||++||+|+||+++|+++....
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred hheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 344444443333345566778899999999999999999999999999886543
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.8e-61 Score=623.94 Aligned_cols=515 Identities=37% Similarity=0.548 Sum_probs=372.9
Q ss_pred CCCceEEeecCCCCCCCCcccccccccceeccccccccCCCCcccc-ccccchhhhcccccccccCchhhhcccccccee
Q 001274 168 TSLEELVIYSNNLTGAIPASISKLRQLRVIRAGHNSLSGPIPPEIS-ECEGLEVLGLAQNSLEGFLPSELEKLRNLTDLI 246 (1109)
Q Consensus 168 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 246 (1109)
.+++.|+|++|++++.+|..|..+++|++|+|++|++++.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 4677888888888877777777777777777777777766665543 566666666666666555553 3345555555
Q ss_pred cccccccCCCCCCccccccccceeeeeccceecCchhhhccCccceEEeecccccCccCcccCCCCcCcEEEccCCcccC
Q 001274 247 LWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPKELGKLSRLKKLYVYTNELNGTIPHELGNCTSAVEIDLSENQLTG 326 (1109)
Q Consensus 247 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~ 326 (1109)
|++|.+++.+|..++++++|++|+|++|.+.+.+|..++++++|++|++++|.+.+.+|..++++++
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~------------- 213 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKS------------- 213 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCC-------------
Confidence 5555555555555555555555555555555555555555555555555555554444444444444
Q ss_pred CCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCcccCCCCcchhcccccceEEcccccccccCCCcccc
Q 001274 327 FIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGV 406 (1109)
Q Consensus 327 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 406 (1109)
|+.|+|++|.+.+.+|..+.++++|++|++++|++++.+|..|.++++|+.|++++|.+.+.+|..+..
T Consensus 214 -----------L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 282 (968)
T PLN00113 214 -----------LKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS 282 (968)
T ss_pred -----------ccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhh
Confidence 445555555555555555555666666666666666556666666666666666666666666666666
Q ss_pred cCcCcEEEeccccccCccchhhhcccccceeecCCccccCCCCCCCccccccceeecccccccccCCccccCCcccceec
Q 001274 407 NSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALE 486 (1109)
Q Consensus 407 ~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 486 (1109)
+++|++|++++|.+.+.+|..+..+++|++|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+
T Consensus 283 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~ 362 (968)
T PLN00113 283 LQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLD 362 (968)
T ss_pred ccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEE
Confidence 66666666666666666666666666677777777777666666677777777777777777777777777788888888
Q ss_pred cccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCcc
Q 001274 487 LYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTG 566 (1109)
Q Consensus 487 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 566 (1109)
|++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|+|++|++++.+|..+.++++|+.|++++|++++
T Consensus 363 Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 442 (968)
T PLN00113 363 LSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQG 442 (968)
T ss_pred CCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccC
Confidence 88888887778888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCcccccccccceecccccccccccCcccCCCcccceeeccCccccccccccccccchhhhhhccCCcccccccccccc
Q 001274 567 SAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGVIPYELG 646 (1109)
Q Consensus 567 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~ 646 (1109)
.+|..+..+++|+.|+|++|++.+.+|..++ .++|+.|++++|++++.+|..+.+++.|. .|+|++|++++.+|..++
T Consensus 443 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~ 520 (968)
T PLN00113 443 RINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELM-QLKLSENKLSGEIPDELS 520 (968)
T ss_pred ccChhhccCCCCcEEECcCceeeeecCcccc-cccceEEECcCCccCCccChhhhhhhccC-EEECcCCcceeeCChHHc
Confidence 8888888888888888888888888877664 57888899999999888888888888886 589999999999999999
Q ss_pred CccccceeecCCCccccCCchhhhccccceEEEccCcccccccCCC-cccccccCCcccCCCCcc
Q 001274 647 NLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLSNNNLVGTVPNT-TVFRRIDSSNFAGNRGLC 710 (1109)
Q Consensus 647 ~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~~c 710 (1109)
++++|++|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|.. ..+..+....+.+|+..+
T Consensus 521 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 521 SCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred CccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 9999999999999999999999999999999999999999999974 223344445566776543
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-47 Score=429.43 Aligned_cols=290 Identities=48% Similarity=0.790 Sum_probs=249.3
Q ss_pred CCCCCCHHHHHHHhcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEE
Q 001274 788 PKEGFKYHNLLEATGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYG 867 (1109)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 867 (1109)
+...|.+.++..+|++|...+.||+|+||.||+|..++++.||||++.....+. .++|.+|++++.+++|||+|+++|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEE
Confidence 456689999999999999999999999999999999989999999886443322 566999999999999999999999
Q ss_pred EEEeCC-ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 001274 868 FCYHQD-SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAH 946 (1109)
Q Consensus 868 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 946 (1109)
||.+.+ +.++|||||++|+|.++++..... .++|..|.+||.++|+||+|||+.+...||||||||+|||+|+++.+|
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999998 499999999999999999987653 589999999999999999999998888999999999999999999999
Q ss_pred EeeccccccccCCCCCCcccc-ccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcc--cCCcHHHHHHHh
Q 001274 947 VGDFGLAKLIDLPYSKSMSAI-AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLE--LGGDLVTWVRRS 1023 (1109)
Q Consensus 947 l~DFG~a~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~--~~~~~~~~~~~~ 1023 (1109)
|+|||+|+..... ....... .||.+|+|||++..+..+.|+|||||||++.|++||+.+.+... ....+.+|+...
T Consensus 218 lsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 218 LSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred ccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 9999999754421 1222222 79999999999999999999999999999999999999887543 344588998776
Q ss_pred hhccCCCchhhhhhcchhhcccH-HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1024 IHEMVPTSELFDKRLDLSAKRTV-EEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
+... ...+++|+.+... .... ++..++..++.+|++.+|.+||+|.||+++|+.+...
T Consensus 297 ~~~~-~~~eiiD~~l~~~-~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 297 LEEG-KLREIVDPRLKEG-EYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHCc-chhheeCCCccCC-CCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 6665 5788888887632 2232 6888899999999999999999999999999665443
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-45 Score=405.34 Aligned_cols=262 Identities=35% Similarity=0.534 Sum_probs=215.2
Q ss_pred CCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-ceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-SNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~ 882 (1109)
+...+.+|+|+||+||+|.+.....||||++..........++|.+|+.++.+++|||||+++|+|.... ..++|||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 3344569999999999999975555999999866555444779999999999999999999999999988 789999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCC-eEecCCCCCceeeCCCC-ceEEeeccccccccCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPH-IIHRDIKSNNILLDEEF-QAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~~~ 960 (1109)
++|+|.++++.. ....+++..+++++.+||+||.||| +.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 999999999884 2234999999999999999999999 556 99999999999999997 99999999998765322
Q ss_pred CCCccccccccceecccccc--CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 961 SKSMSAIAGSYGYIAPEYAY--TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
...+...||+.|||||++. ..+|+.|+||||||+++|||+||+.||.+....+.....+....+...+
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--------- 268 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--------- 268 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC---------
Confidence 3445578999999999999 6699999999999999999999999999765422221222222222111
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccCC
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVSD 1086 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 1086 (1109)
......+..++.+||+.||++||++.+++..|+.++.....
T Consensus 269 -------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 269 -------KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred -------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 11334678899999999999999999999999988776544
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-45 Score=404.03 Aligned_cols=257 Identities=30% Similarity=0.463 Sum_probs=218.0
Q ss_pred CCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEecc
Q 001274 804 FSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
++..+.||+|.||+||.|+++....||||.++.. ....++|.+|+++|++++|++||+++|+|..++..+||||||+
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~---~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG---SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc---ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 4456789999999999999988889999999843 3456789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC
Q 001274 884 NGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS 963 (1109)
Q Consensus 884 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 963 (1109)
.|+|.+|++... ...+...+.+.++.|||+||+||+ ++++|||||.++||||+++..+||+|||+|+...++....
T Consensus 285 ~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 285 KGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred cCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 999999999732 224889999999999999999999 8899999999999999999999999999999766556656
Q ss_pred ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhh
Q 001274 964 MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSA 1042 (1109)
Q Consensus 964 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1109)
.....-+..|+|||.+..++|+.|||||||||++|||+| |+.||..+. ..+..+.+.+..+-.
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-n~ev~~~le~GyRlp--------------- 424 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-NEEVLELLERGYRLP--------------- 424 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-HHHHHHHHhccCcCC---------------
Confidence 666778899999999999999999999999999999999 999988654 222233333222211
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1043 KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1043 ~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
.+..++..+.++|..||+.+|++||||+.+...+++.....
T Consensus 425 -~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 425 -RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred -CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 12334557889999999999999999999999888876543
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-44 Score=380.60 Aligned_cols=261 Identities=27% Similarity=0.404 Sum_probs=221.1
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-ceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-SNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 880 (1109)
+.+..+.||+|..|+||+++++ +++.+|+|++.. .......+++.+|+++++..+||+||.++|+|.... ...++||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 4556678999999999999976 688999999943 344556788999999999999999999999999999 4999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
||++|+|++++...+. +++...-+|+.+|++||.|||+ +++||||||||+|||++..|.|||+|||.+......
T Consensus 159 YMDgGSLd~~~k~~g~---i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVGR---IPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hcCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 9999999999987654 8999999999999999999994 279999999999999999999999999999877633
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCc-ccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSL-ELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
...+++||..|||||.+.+..|+.++||||||++++|+.+|+.||... ....+..+.+.....+..|..+.
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~------ 304 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPE------ 304 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCc------
Confidence 446789999999999999999999999999999999999999999865 23345566666655544332111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
.....+|..|+..|++.||.+||+++|+++|-+-.....
T Consensus 305 ------~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 305 ------GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred ------ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 023457899999999999999999999999976654443
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-43 Score=394.67 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=218.2
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
.+|..++.||+|||+.||++++ .+|+.||+|++..+.. .....+...+|+++.+.++|||||+++++|++.+.+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5789999999999999999997 7899999999975422 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
|+|+.++|.+++++.+. +++.+++.+++||+.|+.||| +.+|||||||..|++++++.++||+|||+|.....+
T Consensus 98 ELC~~~sL~el~Krrk~---ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKP---LTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhcCC---CCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 99999999999985554 999999999999999999999 889999999999999999999999999999988743
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.+...+.+|||.|.|||++....++..+||||+|||+|-|+.|++||+... +.+...........+
T Consensus 172 -~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~----vkety~~Ik~~~Y~~--------- 237 (592)
T KOG0575|consen 172 -GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT----VKETYNKIKLNEYSM--------- 237 (592)
T ss_pred -ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch----HHHHHHHHHhcCccc---------
Confidence 455678899999999999999999999999999999999999999998643 222222221111111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
+.....+..++|.++++.+|++|||+.+|+.+-.......
T Consensus 238 -----P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~ 277 (592)
T KOG0575|consen 238 -----PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFT 277 (592)
T ss_pred -----ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCc
Confidence 1122234668999999999999999999999987744443
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-44 Score=377.83 Aligned_cols=258 Identities=29% Similarity=0.376 Sum_probs=214.1
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCc-----chhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGA-----TADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
+.|.+.+.||+|+||.|-+|.. ++|+.||||++..+.... .....+.+|+++|++++|||||+++++|...++.
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 5788889999999999999974 579999999997653222 1233467999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC---CceEEeeccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE---FQAHVGDFGL 952 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~ 952 (1109)
|+||||++||+|.+.+-.++. +.+.....+++|++.|+.||| +.||+||||||+|||+..+ ..+||+|||+
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred EEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccch
Confidence 999999999999999988765 788888999999999999999 8899999999999999765 7899999999
Q ss_pred cccccCCCCCCccccccccceeccccccCCCC---CccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCC
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKV---TEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVP 1029 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 1029 (1109)
|+..+ ....+.+.+||+.|.|||++.++.+ ..++||||+||++|-+++|..||.+-.....+.+.+... ..+
T Consensus 326 AK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G---~y~ 400 (475)
T KOG0615|consen 326 AKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG---RYA 400 (475)
T ss_pred hhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC---ccc
Confidence 99876 3455678999999999999987653 348899999999999999999998655444455544432 222
Q ss_pred CchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1030 TSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..+..+. +..++..++|.+|+..||++|||+.|++++-|.-
T Consensus 401 f~p~~w~----------~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 401 FGPLQWD----------RISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred ccChhhh----------hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 2222222 2234678999999999999999999999998765
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-44 Score=377.44 Aligned_cols=202 Identities=30% Similarity=0.489 Sum_probs=184.2
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
..++|...+.||+|+||+||+|+++ ++..||||.+....-.....+....|+.+++.++|||||++++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 3468888999999999999999965 689999999986655566677889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC------CceEEeeccc
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE------FQAHVGDFGL 952 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~------~~~kl~DFG~ 952 (1109)
||||.||+|.+|++..+. ++++.++.++.|||.|+++|| +++||||||||+|||++.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~~~~---l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRGR---LPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 999999999999998764 999999999999999999999 8899999999999999765 5689999999
Q ss_pred cccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQS 1009 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~ 1009 (1109)
|+... ......+.+|++.|||||++..++|+.|+|+||+|+++|+|++|+.||+.
T Consensus 162 AR~L~--~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 162 ARFLQ--PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhhCC--chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 99886 23344678999999999999999999999999999999999999999984
No 10
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.7e-46 Score=390.98 Aligned_cols=491 Identities=29% Similarity=0.418 Sum_probs=231.7
Q ss_pred CCCCCceEEccCCcccccCCchhhccccceEEEcccccccccccccccCcCCCceEEeecCCCCCCCCccccccccccee
Q 001274 118 NCSSLEILDLCTNRLHGVIPFQLFFINTLRKLYLCENYIFGEIPEEIGNLTSLEELVIYSNNLTGAIPASISKLRQLRVI 197 (1109)
Q Consensus 118 ~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 197 (1109)
.-..|+.|+|++|.+. .+...+.++..|..|++++|+++ +.|++++.+..++.|+.++|++. .+|..++.+..|+.|
T Consensus 43 ~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l 119 (565)
T KOG0472|consen 43 EQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKL 119 (565)
T ss_pred hhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhh
Confidence 3344555555555554 33334445555555555555554 44555555555555555555555 555555555555555
Q ss_pred ccccccccCCCCccccccccchhhhcccccccccCchhhhccccccceecccccccCCCCCCccccccccceeeeeccce
Q 001274 198 RAGHNSLSGPIPPEISECEGLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFS 277 (1109)
Q Consensus 198 ~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 277 (1109)
+.++|.+. .+|++++.+..|+.|+..+|+++ ..|..+..+.+|..|++.+|+++...|..+ +++.|++||+.+|-++
T Consensus 120 ~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~ 196 (565)
T KOG0472|consen 120 DCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE 196 (565)
T ss_pred hcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh
Confidence 55555555 45555555555555555555555 345555555555555555555552222222 2555555555555554
Q ss_pred ecCchhhhccCccceEEeecccccCccCcccCCCCcCcEEEccCCcccCCCcccc-cCCCCcceEecccccccCcccccc
Q 001274 278 GGLPKELGKLSRLKKLYVYTNELNGTIPHELGNCTSAVEIDLSENQLTGFIPREL-GLIPNLCLLQLFENMLQGSIPREL 356 (1109)
Q Consensus 278 ~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l 356 (1109)
.+|..++.+.+|..||+.+|++. .+| +|..|+.|.+|+++.|+|. .+|.+. ..++++..|+|.+|++. +.|+.+
T Consensus 197 -tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~ 271 (565)
T KOG0472|consen 197 -TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEI 271 (565)
T ss_pred -cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHH
Confidence 45555555555555555555554 333 4555555555555555554 223222 24555555555555554 344445
Q ss_pred cCCCCccEEEcccCcccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhccc--cc
Q 001274 357 GQLTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQ--KL 434 (1109)
Q Consensus 357 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~--~L 434 (1109)
+-+.+|++||+|+|.|+ ..|..++++ .|+.|.+.+|.+. .+-...+.+-+ -|
T Consensus 272 clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlr------------------------TiRr~ii~~gT~~vL 325 (565)
T KOG0472|consen 272 CLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLR------------------------TIRREIISKGTQEVL 325 (565)
T ss_pred HHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchH------------------------HHHHHHHcccHHHHH
Confidence 55555555555555554 344444444 4444555554444 22111111100 01
Q ss_pred ceeec--CCccccCCCCCCCccccccceeecccccccccCCccccCCcccceeccccccccCCCCccccccc--cccEEE
Q 001274 435 IFLSL--GSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLR--NLERLH 510 (1109)
Q Consensus 435 ~~L~L--~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~ 510 (1109)
++|.= ..-.++..-...-. .-+ ...+..| ....+.+.+.|+++.-+++.+..+.|..-. -.+..+
T Consensus 326 KyLrs~~~~dglS~se~~~e~------~~t----~~~~~~~-~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~Vn 394 (565)
T KOG0472|consen 326 KYLRSKIKDDGLSQSEGGTET------AMT----LPSESFP-DIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVN 394 (565)
T ss_pred HHHHHhhccCCCCCCcccccc------cCC----CCCCccc-chhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEe
Confidence 22110 00000000000000 000 0000001 112234455555555555532222222111 144555
Q ss_pred ccCCccCCCCChhhcccccccE-EecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecccccccc
Q 001274 511 LSENYFVGYIPSEVGNLEHLVT-FNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLT 589 (1109)
Q Consensus 511 Ls~N~l~~~~p~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 589 (1109)
++.|++. .+|..+..++.+.+ +++++|.++ -+|..+..+++|..|+|++|.+. .+|.+++.+..|+.|+++.|++.
T Consensus 395 fskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr 471 (565)
T KOG0472|consen 395 FSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR 471 (565)
T ss_pred cccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc
Confidence 5566555 34555554444333 334444443 55555555666666666666555 45556666666666666666555
Q ss_pred cccCcccCCCcccceeeccCccccccccccccccchhhhhhccCCccccccccccccCccccceeecCCCccccCCchhh
Q 001274 590 GAIPSSLGGLARLTELQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGVIPYELGNLQMLEALYLDDNQLIGEIPASM 669 (1109)
Q Consensus 590 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~ 669 (1109)
.+|.....+..++.+-. ++|++....|..+.++.+|.+|||.+|.|. .||+.+
T Consensus 472 -~lP~~~y~lq~lEtlla-------------------------s~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~L 524 (565)
T KOG0472|consen 472 -MLPECLYELQTLETLLA-------------------------SNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPIL 524 (565)
T ss_pred -cchHHHhhHHHHHHHHh-------------------------ccccccccChHHhhhhhhcceeccCCCchh-hCChhh
Confidence 44544443333332222 223333333333555556666666666665 566666
Q ss_pred hccccceEEEccCcccc
Q 001274 670 GEQMSLLVCNLSNNNLV 686 (1109)
Q Consensus 670 ~~l~~L~~l~ls~N~l~ 686 (1109)
+++.+|+.|++++|+++
T Consensus 525 gnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 525 GNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccccceeEEEecCCccC
Confidence 66666666666666665
No 11
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=9.3e-46 Score=386.95 Aligned_cols=473 Identities=33% Similarity=0.480 Sum_probs=324.4
Q ss_pred ccceeecccCccCCCCCccccCCCCCceEEccCCcccccCCchhhccccceEEEcccccccccccccccCcCCCceEEee
Q 001274 97 RLVEFNISMNFVTGSIPTDLANCSSLEILDLCTNRLHGVIPFQLFFINTLRKLYLCENYIFGEIPEEIGNLTSLEELVIY 176 (1109)
Q Consensus 97 ~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 176 (1109)
.|+.|.++.|.++ .+-+.+.++..|++|++.+|++. ..|.+++.+..++.|+.++|+++ ++|++++.+.+|..|+.+
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4556667777666 34456788888888888888887 78888899999999999999986 889999999999999999
Q ss_pred cCCCCCCCCcccccccccceeccccccccCCCCccccccccchhhhcccccccccCchhhhccccccceecccccccCCC
Q 001274 177 SNNLTGAIPASISKLRQLRVIRAGHNSLSGPIPPEISECEGLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEI 256 (1109)
Q Consensus 177 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 256 (1109)
+|++. ++|++++.+-.|..++..+|+++ ..|+.+.++.+|..|++.+|++....|..+. ++.|++||..+|.++ .+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cC
Confidence 99998 88999999999999999999999 7888999999999999999999965555555 999999999999998 89
Q ss_pred CCCccccccccceeeeeccceecCchhhhccCccceEEeecccccCccCcc-cCCCCcCcEEEccCCcccCCCcccccCC
Q 001274 257 PPTIGNIQSLELLALHENSFSGGLPKELGKLSRLKKLYVYTNELNGTIPHE-LGNCTSAVEIDLSENQLTGFIPRELGLI 335 (1109)
Q Consensus 257 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~-l~~l~~L~~L~Ls~n~l~~~~p~~l~~l 335 (1109)
|+.++.+.+|+.|+|.+|+|. .+| +|+.+..|++|+++.|+|. .+|.+ ..++.++..|||.+|+++ ..|+.+..+
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred ChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 999999999999999999998 667 8999999999999999998 55555 558999999999999999 678899999
Q ss_pred CCcceEecccccccCcccccccCCCCccEEEcccCcccCCCCcchhcc------cccceEEccccccc---c------cC
Q 001274 336 PNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGTIPLEFQNL------TYLVDLQLFDNHLE---G------TI 400 (1109)
Q Consensus 336 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~---~------~~ 400 (1109)
.+|.+|++++|.|+ ..|..++++ +|+.|-+.+|.+.. +-..+-+. +.|+. ....-.++ | ..
T Consensus 275 rsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs-~~~~dglS~se~~~e~~~t~ 350 (565)
T KOG0472|consen 275 RSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRS-KIKDDGLSQSEGGTETAMTL 350 (565)
T ss_pred hhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHH-hhccCCCCCCcccccccCCC
Confidence 99999999999999 568889999 99999999999973 33222221 22222 01111111 1 00
Q ss_pred CC----cccccCcCcEEEeccccccCccchhhhcccc---cceeecCCccccCCCCCCCccccccceeecccccccccCC
Q 001274 401 PP----HIGVNSHLSVLDVSMNNLDGSIPPHLCMYQK---LIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLP 473 (1109)
Q Consensus 401 p~----~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~---L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 473 (1109)
|. ......+.+.|+++.-+++. +|.......+ ....+++.|++. .+|..+..+..+.+.
T Consensus 351 ~~~~~~~~~~~i~tkiL~~s~~qlt~-VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~------------ 416 (565)
T KOG0472|consen 351 PSESFPDIYAIITTKILDVSDKQLTL-VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTD------------ 416 (565)
T ss_pred CCCcccchhhhhhhhhhccccccccc-CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHH------------
Confidence 11 11222345555555555552 3332222222 444555555554 334444444333222
Q ss_pred ccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCC
Q 001274 474 IEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVN 553 (1109)
Q Consensus 474 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 553 (1109)
+.+++|.++ -+|..+..+++|..|+|++|-+. .+|..++.+..|+.||+|+|++. .+|.++..+..
T Consensus 417 -----------l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~ 482 (565)
T KOG0472|consen 417 -----------LVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQT 482 (565)
T ss_pred -----------HHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHH
Confidence 233333332 34445555555555555555444 34555555555555555555555 45554444444
Q ss_pred CCeeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcccceeeccCcccc
Q 001274 554 LQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFS 613 (1109)
Q Consensus 554 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 613 (1109)
|+.+-.++|++....|+.+.++.+|.+|||.+|.+. .+|..++++++|++|++.||+|.
T Consensus 483 lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 483 LETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 444444555555333334555555555555555555 44555555666666666666555
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.4e-43 Score=353.91 Aligned_cols=267 Identities=21% Similarity=0.364 Sum_probs=214.5
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+.|+...++|+|+||+||+++.+ +|+.||||++.....++...+-.++|++++++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45777889999999999999976 69999999998776666667788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
||+. ++.+-+...... ++...+.+++.|+++|+.|+| ++++|||||||+||+++.+|.+|+||||+|+.... .
T Consensus 82 ~~dh-TvL~eLe~~p~G--~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-p 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNG--VPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-P 154 (396)
T ss_pred ecch-HHHHHHHhccCC--CCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC-C
Confidence 9976 555666665543 899999999999999999999 88999999999999999999999999999998764 3
Q ss_pred CCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC-chhhhhhc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT-SELFDKRL 1038 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1038 (1109)
....+.++.|..|+|||.+.+ .+|+..+||||+||++.||++|.+-|.+..+. +....++....+..|- ..++....
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi-DQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI-DQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH-HHHHHHHHHHcccCHHHHHHhccCC
Confidence 445577889999999999887 78999999999999999999999999875432 2223333333333221 11111000
Q ss_pred -------------chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1039 -------------DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1039 -------------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
..-.+..+.......+++.+|++.||.+|++-+|++.+
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 00011223333468899999999999999999999865
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=389.74 Aligned_cols=259 Identities=25% Similarity=0.413 Sum_probs=219.0
Q ss_pred CCCCCceEecCCcceEEEEEec----CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA----NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
...+.++||.|.||+||+|+++ ....||||.++. +.......+|+.|+.||.+++||||+++.|+.......+||
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~-GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA-GYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeecc-CccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 3456789999999999999975 245799999984 44556678999999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
+|||++|+|+.||+.+.++ +++.+...+.++||.||.||- ++++|||||.++||||+.+..+|++|||++|..++
T Consensus 709 TEyMENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhhhhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 9999999999999998765 999999999999999999999 88999999999999999999999999999998764
Q ss_pred CCCCCccc--cccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 959 PYSKSMSA--IAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 959 ~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
+.....+. -.-+.+|.|||.+..++++.++|||||||++||.++ |..||.++.. ++...-+...++-..
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-QdVIkaIe~gyRLPp------- 855 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEQGYRLPP------- 855 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-HHHHHHHHhccCCCC-------
Confidence 43222222 234689999999999999999999999999999888 9999987652 233333332222221
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
+.+++..+.++|..||+.|-.+||.|.||+.+|.+.....
T Consensus 856 ---------PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 856 ---------PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred ---------CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 4456678999999999999999999999999999876553
No 14
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.9e-42 Score=394.70 Aligned_cols=265 Identities=29% Similarity=0.458 Sum_probs=217.7
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
.+.+..+.||+|+||+||+|+.. +.+.||||.++... .....++|.+|++++..++|||||+++|+|..+++.
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 45566789999999999999843 35679999998553 334578999999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCC-----------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQT-----------CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQ 944 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 944 (1109)
++|+|||..|||.+||+...+. ..++..+.+.||.|||.||+||- ++.+|||||.++|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceE
Confidence 9999999999999999755432 12788899999999999999999 779999999999999999999
Q ss_pred eEEeeccccccccC-CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHH
Q 001274 945 AHVGDFGLAKLIDL-PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRR 1022 (1109)
Q Consensus 945 ~kl~DFG~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~ 1022 (1109)
|||+|||+++..-. ++.+......-+++|||||.+..++|+.++|||||||++||+++ |+.||.+...+ +.++.++.
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~-EVIe~i~~ 720 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ-EVIECIRA 720 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH-HHHHHHHc
Confidence 99999999986543 33333335567889999999999999999999999999999999 99999876532 22232322
Q ss_pred hhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccCCC
Q 001274 1023 SIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVSDY 1087 (1109)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 1087 (1109)
..- . ..+..++.+++.+|..||+..|++||+++||-..|....+..+..
T Consensus 721 g~l--L--------------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~ 769 (774)
T KOG1026|consen 721 GQL--L--------------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY 769 (774)
T ss_pred CCc--c--------------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence 110 0 113344567899999999999999999999999998887655443
No 15
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=348.42 Aligned_cols=261 Identities=26% Similarity=0.396 Sum_probs=212.2
Q ss_pred cCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEE-EEeCCc-eEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGF-CYHQDS-NLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-~~~~~~-~~lv 878 (1109)
.+|++.++||.|.||+||++. ..+|..||.|.+....-+..+.++...|+.++++++|||||+++++ +.++.. .++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 357888999999999999998 5589999999998666666677889999999999999999999984 334444 7899
Q ss_pred EEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 879 YEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRP-HIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
||||..|+|..+++..+ .++.+++..+++++.|++.||.++|+.+.+ -|+||||||.||+++.+|.+|++|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999986543 344699999999999999999999964322 3999999999999999999999999999988
Q ss_pred cCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 957 DLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
... .......+|||.||+||.+.+.+|+.|+||||+||++|||..-+.||.+. .+.+.-++......+. ..
T Consensus 179 ~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~----n~~~L~~KI~qgd~~~--~p-- 249 (375)
T KOG0591|consen 179 SSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD----NLLSLCKKIEQGDYPP--LP-- 249 (375)
T ss_pred cch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc----cHHHHHHHHHcCCCCC--Cc--
Confidence 632 33346679999999999999999999999999999999999999999863 4555544444443321 11
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
..-..+.+..++..|+..||+.||+.-.+++.+..
T Consensus 250 --------~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 250 --------DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred --------HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 11223457789999999999999996555554433
No 16
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-41 Score=354.91 Aligned_cols=253 Identities=26% Similarity=0.324 Sum_probs=211.3
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCc-chhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGA-TADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
.++|++.++||+|+||+||.++.+ +++.||+|+++.+..-. .+.+...+|..++.+++||.||+++-.|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 368999999999999999999855 68999999997653322 3466788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
+||+.||.|..++.+.+. +++..++..+..|+.||.||| +++||||||||+|||+|.+|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 999999999999987665 999999999999999999999 88999999999999999999999999999985432
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
......+++||+.|||||++.+..|+.++|.||+|+++|||++|..||.+ .+...+.+.......+....
T Consensus 178 -~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~----~~~~~~~~~I~~~k~~~~p~----- 247 (357)
T KOG0598|consen 178 -DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA----EDVKKMYDKILKGKLPLPPG----- 247 (357)
T ss_pred -CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC----ccHHHHHHHHhcCcCCCCCc-----
Confidence 23344568999999999999999999999999999999999999999985 34444444444443111111
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCC----CHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRP----TMREVIAMM 1077 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RP----t~~evl~~L 1077 (1109)
. ......+++.+.+..||++|- .+.+|.+|-
T Consensus 248 -----~---ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hp 282 (357)
T KOG0598|consen 248 -----Y---LSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHP 282 (357)
T ss_pred -----c---CCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCc
Confidence 0 112456899999999999994 677776653
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-42 Score=367.23 Aligned_cols=276 Identities=20% Similarity=0.290 Sum_probs=219.1
Q ss_pred hcCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCC-ceEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQD-SNLL 877 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~l 877 (1109)
.++|...++||.|.||.||+|+. .++..||||+++.+... +++-.-++|++.++++. ||||+++.+++.+.+ ..|+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 46888999999999999999984 47999999999876554 44555679999999998 999999999999988 8899
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
|||||+ .+|+++++... +.+++..++.|+.||++||+|+| ++|+.|||+||+|||+.....+||+|||+||...
T Consensus 88 VfE~Md-~NLYqLmK~R~--r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDRN--RLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eHHhhh-hhHHHHHhhcC--CcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccc
Confidence 999995 59999998773 45999999999999999999999 8899999999999999999999999999999775
Q ss_pred CCCCCCccccccccceecccccc-CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CCchhhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PTSELFD 1035 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1035 (1109)
.....+.++.|..|+|||++. .+.|+.+.||||+|||++|+.+-+..|.+..+.+.+ .+...-.. |..+.+.
T Consensus 162 --SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi----~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 162 --SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQI----YKICEVLGTPDKDSWP 235 (538)
T ss_pred --cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHH----HHHHHHhCCCccccch
Confidence 345567789999999999876 456899999999999999999999999875433222 22111111 1111111
Q ss_pred h------hcchh---------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccCCCCC
Q 001274 1036 K------RLDLS---------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVSDYPS 1089 (1109)
Q Consensus 1036 ~------~~~~~---------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 1089 (1109)
. .+... .........++.+++.+|+.|||.+||||+|++++-...........+
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~~~~a 304 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRASGSSA 304 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccccccc
Confidence 1 01000 111223556788999999999999999999999997665555544433
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-40 Score=360.13 Aligned_cols=268 Identities=27% Similarity=0.335 Sum_probs=216.3
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--CceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 878 (1109)
+.|+..++||+|.||.||+|++ .+|+.||+|++...........-..+|+.++++++||||+++.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 4566678999999999999984 5799999999987776666677788999999999999999999998876 688999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
+|||+. +|.-++....-+ |++.++..+++|++.||+|+| .++|+|||||.+|||||.+|.+||+|||+|+.+..
T Consensus 197 FeYMdh-DL~GLl~~p~vk--ft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPGVK--FTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred Eecccc-hhhhhhcCCCcc--cChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 999976 887777664433 999999999999999999999 88999999999999999999999999999998876
Q ss_pred CCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
......+..+.|..|+|||.+.|. .|+.++|+||.|||+.||++|+..|++.. -++.+...++-...+.+.+.+.
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t----EveQl~kIfklcGSP~e~~W~~ 346 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT----EVEQLHKIFKLCGSPTEDYWPV 346 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc----HHHHHHHHHHHhCCCChhcccc
Confidence 666667888899999999999875 59999999999999999999999998643 3334444433333222222221
Q ss_pred cchh----------hcccHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1038 LDLS----------AKRTVEE-----MTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1038 ~~~~----------~~~~~~~-----~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.... ......+ .....+++..++..||.+|.||.++++.-..
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 1110 0111111 2347789999999999999999999876543
No 19
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-41 Score=369.08 Aligned_cols=268 Identities=28% Similarity=0.432 Sum_probs=216.5
Q ss_pred HHhcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
.-.+++.+...||+|.||+||+|+|.. .||||++.......+..+.|.+|+.++++-||.||+-+.|||..+.. .||
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred cCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 334566778899999999999999863 59999999988888889999999999999999999999999998877 999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
+.||+|.+|+.+++..+.+ ++....+.|++||++||.||| .++|||||||..||++.++++|||+|||++..-.+
T Consensus 466 TqwCeGsSLY~hlHv~etk--fdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQETK--FDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred ehhccCchhhhhccchhhh--hhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeee
Confidence 9999999999999987654 999999999999999999999 88999999999999999999999999999965432
Q ss_pred CC-CCCccccccccceeccccccC---CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 959 PY-SKSMSAIAGSYGYIAPEYAYT---MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 959 ~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
-. ........|...|||||++.. .+|++.+||||||+++|||+||..||..-. .+..-|+. -++.. +.
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~--~dqIifmV--GrG~l-~p--- 612 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN--RDQIIFMV--GRGYL-MP--- 612 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC--hhheEEEe--ccccc-Cc---
Confidence 11 112234457889999999874 369999999999999999999999998321 11111111 11111 00
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccCCC
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVSDY 1087 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 1087 (1109)
++. .....+.+++.+++..||..++++||.+.+|+..|+....+.+.-
T Consensus 613 --d~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki 660 (678)
T KOG0193|consen 613 --DLS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKI 660 (678)
T ss_pred --cch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccccc
Confidence 000 113344567889999999999999999999999999888764333
No 20
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-42 Score=372.89 Aligned_cols=370 Identities=26% Similarity=0.269 Sum_probs=245.7
Q ss_pred cchhhhcccccccccCchhhhccccccceecccccccCCCCCCccccccccceeeeeccceecCchhhhccCccceEEee
Q 001274 217 GLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPKELGKLSRLKKLYVY 296 (1109)
Q Consensus 217 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 296 (1109)
.-+.|++++|++....+..|.++++|+.+++..|.++ .||...+...+|+.|+|.+|.|+..-.+.+.-++.|+.|||+
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3456888888888888888889999999999999998 888877777789999999998887777788888888888888
Q ss_pred cccccCccCcccCCCCcCcEEEccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCcccCCC
Q 001274 297 TNELNGTIPHELGNCTSAVEIDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGTI 376 (1109)
Q Consensus 297 ~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 376 (1109)
.|.|+...-.+|..-.++++|+|++|+|+..-...|..+.+|..|.|+.|.++...+..|.++++|+.|||..|+|.-.-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 88888555556777678888888888888766666666666666666666666666666666666666666666665332
Q ss_pred CcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCCccccCCCCCCCcccc
Q 001274 377 PLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNIPPGLKTCR 456 (1109)
Q Consensus 377 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 456 (1109)
-..|.++++|+.|.|..|.+.......|..+.++++|+|+.|+++..-..+ +.+++
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~------------------------lfgLt 293 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGW------------------------LFGLT 293 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccc------------------------ccccc
Confidence 445666666666666666666555555555555555555555555444444 44455
Q ss_pred ccceeecccccccccCCccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecc
Q 001274 457 SLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNIS 536 (1109)
Q Consensus 457 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 536 (1109)
+|++|+|++|.|..+.++.+.-.++|++|+|++|+|+...++.|..|+.|++|.|++|.++.+-...|..+++|++|||+
T Consensus 294 ~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr 373 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLR 373 (873)
T ss_pred hhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCc
Confidence 55555555555555555555555555555555555555555555555555555555555554444555555555555555
Q ss_pred cCcccccCC---cCCCCCCCCCeeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcccceeeccCccc
Q 001274 537 SNSLSGTIP---HELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIF 612 (1109)
Q Consensus 537 ~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 612 (1109)
+|.|+..+. ..|..|++|+.|+|.+|+|..+.-.+|.++.+|+.|||.+|.|..+.|++|..+ .|++|.++.-.|
T Consensus 374 ~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf 451 (873)
T KOG4194|consen 374 SNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF 451 (873)
T ss_pred CCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccce
Confidence 555554433 235566677777777777764444567777777777777777777777777777 777777665443
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-40 Score=361.40 Aligned_cols=255 Identities=25% Similarity=0.311 Sum_probs=211.2
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 878 (1109)
.+|..++.||+|+|++||+|+.. .++.||||++..+-.. ....+.+..|-.+|.+| .||.|++++-.|+++...|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 57889999999999999999854 6999999999654322 22345677899999999 899999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
+||+++|+|.+++++.+. +++...+.++.+|+.|++||| +.|||||||||+|||+|+|++++|+|||.|+.+..
T Consensus 153 Le~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999998865 999999999999999999999 88999999999999999999999999999987743
Q ss_pred CCCC----------C--ccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 959 PYSK----------S--MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 959 ~~~~----------~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
.... . ...++||-.|.+||++.....+..+|+|+|||++|+|+.|++||.+..+.-.+...+. -
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~----l 302 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA----L 302 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH----h
Confidence 2111 1 1457899999999999999999999999999999999999999986543222222222 1
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..+..+-+ .+.+.+++.+.+..||.+|+|.++|.+|....
T Consensus 303 ~y~fp~~f--------------p~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 303 DYEFPEGF--------------PEDARDLIKKLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred cccCCCCC--------------CHHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence 11111111 13567899999999999999999999886443
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2e-40 Score=360.29 Aligned_cols=271 Identities=24% Similarity=0.391 Sum_probs=227.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+.+....+.+.+.+|+++++.++|||||.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46777889999999999999866 68899999998888877788889999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+.| +|..++...+. ++++.++.++.+++.|+.||| +.+|+|||+||+||+++..|.+|++|||+|+.+.. .
T Consensus 82 ~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST-N 153 (808)
T ss_pred hhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc-C
Confidence 9977 99999987665 999999999999999999999 88999999999999999999999999999997753 2
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
....+.+.||+-|||||++.+++|+..+|+||+||++||+++|++||.. ..+...++....+....
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a----~si~~Lv~~I~~d~v~~---------- 219 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA----RSITQLVKSILKDPVKP---------- 219 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH----HHHHHHHHHHhcCCCCC----------
Confidence 3334667899999999999999999999999999999999999999974 34555555555554322
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH-HHHhhhccCCCCCCCCcccccc
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM-MIDARQSVSDYPSSPTSETPLE 1098 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~-L~~~~~~~~~~~~~~~~~~~~~ 1098 (1109)
+......|..++...+..||.+|.+-.+++.| +++......+.++.++-.++..
T Consensus 220 ----p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~~~~~~~~a~~spft 274 (808)
T KOG0597|consen 220 ----PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINIAELPAQVAFDSPFT 274 (808)
T ss_pred ----cccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhhhcccccccccCccc
Confidence 22344568899999999999999999999877 3444334444444444444433
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-39 Score=325.78 Aligned_cols=268 Identities=22% Similarity=0.309 Sum_probs=212.5
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.+|...+++|+|.||.||+|++ ++|+.||||+++.............+|++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4677888999999999999985 579999999998775554556778899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
||+. +|+..++.... .++..++..++.++++|++|+| .+.|+||||||.|+|++++|.+||+|||+|+.+..+.
T Consensus 82 fm~t-dLe~vIkd~~i--~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNI--ILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred eccc-cHHHHhccccc--ccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 9964 99999987654 4899999999999999999999 7899999999999999999999999999999887443
Q ss_pred CCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.. ....+.|..|+|||.+.|. .|+..+||||.||++.||+-|.+-|.+..+ .+.+...++-...+.+-..+.+.
T Consensus 156 ~~-~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD----idQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 156 RI-QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD----IDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred cc-cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch----HHHHHHHHHHcCCCCcccCcccc
Confidence 33 3334789999999998875 599999999999999999999887775432 22222222221111111111110
Q ss_pred h-------------h-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1040 L-------------S-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1040 ~-------------~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
. . ......+.....+++.+++..+|.+|.++.|++++-...
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~ 285 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFK 285 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhh
Confidence 0 0 012233345568999999999999999999999886544
No 24
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=370.98 Aligned_cols=359 Identities=23% Similarity=0.246 Sum_probs=294.9
Q ss_pred cceeeeeccceecCchhhhccCccceEEeecccccCccCcccCCCCcCcEEEccCCcccCCCcccccCCCCcceEecccc
Q 001274 267 ELLALHENSFSGGLPKELGKLSRLKKLYVYTNELNGTIPHELGNCTSAVEIDLSENQLTGFIPRELGLIPNLCLLQLFEN 346 (1109)
Q Consensus 267 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n 346 (1109)
+.|++++|+++..-+..|.++++|+++++.+|.++ .+|........|+.|+|.+|.|+.+-.+.+..++.|+.|+|+.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 44666666666555666666666666666666665 55554444455666666666666666666666666666666666
Q ss_pred cccCcccccccCCCCccEEEcccCcccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccch
Q 001274 347 MLQGSIPRELGQLTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPP 426 (1109)
Q Consensus 347 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~ 426 (1109)
.|+.+.-..|..-.++++|+|++|.|+..-...|.++.+|..|.|+.|+++...+..|..+++|+.|+|..|+|.-.---
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l 239 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL 239 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhh
Confidence 66665556666667777778888877766677777777777788888887765556666678888888888877744456
Q ss_pred hhhcccccceeecCCccccCCCCCCCccccccceeecccccccccCCccccCCcccceeccccccccCCCCccccccccc
Q 001274 427 HLCMYQKLIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNL 506 (1109)
Q Consensus 427 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 506 (1109)
.|.++++|+.|.|..|.|.......|..+.++++|+|..|+++..-..++.++++|+.|+||+|.|..+.++.+...++|
T Consensus 240 tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL 319 (873)
T KOG4194|consen 240 TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL 319 (873)
T ss_pred hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc
Confidence 78889999999999999998888899999999999999999999889999999999999999999999999999999999
Q ss_pred cEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCC---cccccccccceecc
Q 001274 507 ERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAP---EELGQLVNLELLKL 583 (1109)
Q Consensus 507 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~L 583 (1109)
++|+|++|+|+...+..|..|..|++|+|++|+|..+-...|..+++|++|||++|.|+..+. ..|.++++|+.|+|
T Consensus 320 ~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l 399 (873)
T KOG4194|consen 320 KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRL 399 (873)
T ss_pred eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheee
Confidence 999999999999999999999999999999999998888899999999999999999986554 35889999999999
Q ss_pred cccccccccCcccCCCcccceeeccCccccccccccccccchhh
Q 001274 584 SDNKLTGAIPSSLGGLARLTELQMGGNIFSGSIPVALGQLTALQ 627 (1109)
Q Consensus 584 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~ 627 (1109)
.+|+|..+...+|.++..|+.|||.+|.+...-|.+|..+ .|.
T Consensus 400 ~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk 442 (873)
T KOG4194|consen 400 TGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELK 442 (873)
T ss_pred cCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhh
Confidence 9999998878899999999999999999998889998876 443
No 25
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-40 Score=362.98 Aligned_cols=253 Identities=27% Similarity=0.395 Sum_probs=211.4
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
..|....+||+|+.|.||.|+. .+++.||||++..+... ..+-+.+|+.+|+..+|+|||.+++.|...+..++|||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 4677778999999999999984 47899999999876654 45668899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
||+||+|.+.+.... +++.++..|+.++++||+||| .++|+|||||.+|||++.+|.+||+|||++..+...
T Consensus 351 ym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~- 422 (550)
T KOG0578|consen 351 YMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE- 422 (550)
T ss_pred ecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccc-
Confidence 999999999987654 899999999999999999999 889999999999999999999999999999887633
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.....+.+||+.|||||++....|+.|+||||||++++||+.|..||-.. ..+.. +........| ++
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE---~PlrA-lyLIa~ng~P--~l------- 489 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE---NPLRA-LYLIATNGTP--KL------- 489 (550)
T ss_pred cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC---ChHHH-HHHHhhcCCC--Cc-------
Confidence 33557789999999999999999999999999999999999999998742 12211 1111111111 11
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.........|.+|+.+|++.||++||+|.|+++|-.-
T Consensus 490 --k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl 526 (550)
T KOG0578|consen 490 --KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFL 526 (550)
T ss_pred --CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhh
Confidence 1122223468899999999999999999999998544
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=345.92 Aligned_cols=266 Identities=25% Similarity=0.335 Sum_probs=214.9
Q ss_pred cCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|+...+||.|..++||+|+ .+.++.||||++.....+.. .+.+.+|+..|+.++||||++++..|..+...++||.
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 578888999999999999998 45789999999987755443 6789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
||.+|++.+.++..-.. .+++..+..|.+++++||.||| .+|.||||||+.|||++.+|.|||+|||.+..+....
T Consensus 105 fMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 99999999999876544 3999999999999999999999 8899999999999999999999999999886554322
Q ss_pred CCC---ccccccccceeccccccC--CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 961 SKS---MSAIAGSYGYIAPEYAYT--MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 961 ~~~---~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
.+. ....+||+.|||||++.. ..|+.|+||||||++..||.+|..||....+-.. +...+....|....
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv----Ll~tLqn~pp~~~t-- 254 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV----LLLTLQNDPPTLLT-- 254 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH----HHHHhcCCCCCccc--
Confidence 111 145689999999999553 4599999999999999999999999987543222 22223333322110
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.....+........|..++..|++.||++|||+++++++-+..
T Consensus 255 --~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk 297 (516)
T KOG0582|consen 255 --SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK 297 (516)
T ss_pred --ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence 0111112233334789999999999999999999999875544
No 27
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=351.70 Aligned_cols=260 Identities=31% Similarity=0.449 Sum_probs=208.2
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC--ceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD--SNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 878 (1109)
.+|...+.||+|+||+||++... +|+..|||.+...... ..+.+.+|+.++++++|||||+++|...... ..+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 46778899999999999999865 4899999999755221 2567899999999999999999999755544 58899
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-CCceEEeecccccccc
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE-EFQAHVGDFGLAKLID 957 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~ 957 (1109)
|||+++|+|.+++.+.+. .+++..+++.+.||++|++||| +++||||||||+|||++. ++.+||+|||.++...
T Consensus 95 mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 999999999999998775 3999999999999999999999 889999999999999999 7999999999998765
Q ss_pred C--CCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhh-hccCCCchh
Q 001274 958 L--PYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSI-HEMVPTSEL 1033 (1109)
Q Consensus 958 ~--~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~ 1033 (1109)
. ..........||+.|||||++..+ ....++||||+||++.||+||+.||... ....+++-... ....| .
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~---~~~~~~~~~ig~~~~~P---~ 243 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF---FEEAEALLLIGREDSLP---E 243 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh---cchHHHHHHHhccCCCC---C
Confidence 2 222334567899999999999963 3345999999999999999999999864 11112222111 11111 1
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
+. ........+|+.+|+..+|++||||.+++++........
T Consensus 244 ip----------~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 244 IP----------DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred CC----------cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 11 112234668999999999999999999999988776555
No 28
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-39 Score=359.07 Aligned_cols=255 Identities=25% Similarity=0.354 Sum_probs=222.2
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
+-|+.++.||.|+.|.|-.|++ .+|+.+|||++.... ........+.+|+-+|+.+.||||+++++++....+.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 6788999999999999999985 589999999997652 22334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|-|.+++..++. +++.++.+++.||+.|+.|+| ..+|+|||+||+|+|+|..+.+||+|||+|..-.
T Consensus 92 Eyv~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-- 163 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEV-- 163 (786)
T ss_pred EecCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeeccc--
Confidence 99999999999988776 899999999999999999999 7899999999999999999999999999998643
Q ss_pred CCCCccccccccceeccccccCCCCC-ccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVT-EKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.+....+.||++.|.|||++.|.+|+ .++||||.|||+|.|+||+.||+ ++.+.....+..++.+.+...
T Consensus 164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd----DdNir~LLlKV~~G~f~MPs~----- 234 (786)
T KOG0588|consen 164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD----DDNIRVLLLKVQRGVFEMPSN----- 234 (786)
T ss_pred CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC----CccHHHHHHHHHcCcccCCCc-----
Confidence 34556788999999999999999984 79999999999999999999998 466677766666666544322
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
...++.+++.+|+..||++|.|++||.+|.+-...
T Consensus 235 ---------Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 235 ---------ISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred ---------CCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 22357799999999999999999999999865543
No 29
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=366.44 Aligned_cols=263 Identities=27% Similarity=0.424 Sum_probs=213.6
Q ss_pred cCCCCCceEecCCcceEEEEEecC--C---cEEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN--G---EVIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~--~---~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
.+....++||+|+||.||+|+++. + ..||||..+... .......+|++|+++|+.++|||||+++|++....+.
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344556899999999999998652 2 238999988532 4556778999999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++|||+|.||+|.+|+++++.. ++..++.+++.++|.||+||| ++++|||||.++|+|++.++.+||+|||+++.
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~~--v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKKS--LPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 9999999999999999988763 899999999999999999999 88999999999999999999999999999985
Q ss_pred ccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHH-HHhhhccCCCchh
Q 001274 956 IDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWV-RRSIHEMVPTSEL 1033 (1109)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~ 1033 (1109)
.. .+........-+.+|+|||.+..+.|+.++|||||||++||+++ |..||.+.... +...++ ...++...+
T Consensus 312 ~~-~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-~v~~kI~~~~~r~~~~---- 385 (474)
T KOG0194|consen 312 GS-QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-EVKAKIVKNGYRMPIP---- 385 (474)
T ss_pred Cc-ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-HHHHHHHhcCccCCCC----
Confidence 43 11111112246789999999999999999999999999999999 89999875422 222222 222221111
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccCCC
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVSDY 1087 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 1087 (1109)
...+..+..++.+||..+|++||+|.++.+.++.+.......
T Consensus 386 ------------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 386 ------------SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred ------------CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 122345668888999999999999999999999987776543
No 30
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=388.32 Aligned_cols=262 Identities=30% Similarity=0.452 Sum_probs=214.6
Q ss_pred cCCCCCceEecCCcceEEEEEec--CCc----EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA--NGE----VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
...+..+.||+|+||.||+|... ++. .||||.++.. ....+..+|.+|+.+|++++|||||+++|+|.+....
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 34556789999999999999854 343 4899988733 3455678999999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCC----CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQ----TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
+|++|||++|+|..|+++.+. ...++..+.+.++.+||+|+.||+ ++++|||||.++|+|++....|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999987632 234899999999999999999999 8899999999999999999999999999
Q ss_pred cccccc-CCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCC
Q 001274 952 LAKLID-LPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVP 1029 (1109)
Q Consensus 952 ~a~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 1029 (1109)
+|+.+. .++........-+..|||||.+..+.|+.|+|||||||++||++| |..||.+....+....+.+.. .
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg---R-- 922 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG---R-- 922 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC---c--
Confidence 999443 333333333345679999999999999999999999999999999 999998755333322233321 1
Q ss_pred CchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1030 TSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
+ +.+..+...++++|..||+.+|++||+++.+++.+..+....
T Consensus 923 --------L----~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 923 --------L----DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred --------c----CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 1 112334456789999999999999999999999988887665
No 31
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=359.17 Aligned_cols=243 Identities=30% Similarity=0.447 Sum_probs=203.0
Q ss_pred CceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCC
Q 001274 807 GAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGS 886 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 886 (1109)
.+-||.|+.|.||+|+++ ++.||||+++. .-..+++-+++++|+||+.|.|+|......|||||||..|-
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 456899999999999996 78999999861 12367889999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCccc
Q 001274 887 LGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSA 966 (1109)
Q Consensus 887 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 966 (1109)
|+..|+.... ++......|.++||.||.||| .++|||||||.-||||..+..|||+|||-++..... .....
T Consensus 199 L~~VLka~~~---itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMS 270 (904)
T KOG4721|consen 199 LYEVLKAGRP---ITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMS 270 (904)
T ss_pred HHHHHhccCc---cCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhh
Confidence 9999987654 888899999999999999999 789999999999999999999999999999876522 33456
Q ss_pred cccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccH
Q 001274 967 IAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTV 1046 (1109)
Q Consensus 967 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
++||..|||||++...+.++|+||||||||+|||+||..||.+....+.+...-. ..+. ...+.
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGs--------------NsL~--LpvPs 334 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGS--------------NSLH--LPVPS 334 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccC--------------Cccc--ccCcc
Confidence 7899999999999999999999999999999999999999986542111111000 0011 11233
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1047 EEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1047 ~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
.++.-|.-+++.||+..|..||+|++|+.|+.-+...
T Consensus 335 tcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 335 TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred cCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 4455678899999999999999999999999776544
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=356.36 Aligned_cols=258 Identities=24% Similarity=0.354 Sum_probs=215.0
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC---cchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCc
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG---ATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 874 (1109)
..++|..++.||+|+||+||.|++. +++.||||++...... ....+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4578999999999999999999854 6899999977643111 123456678999999998 9999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-CceEEeecccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE-FQAHVGDFGLA 953 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a 953 (1109)
.++||||+.||+|.+++...+. +.+.++..+++|++.|++|+| +++|+||||||+||+++.+ +.+||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g~---l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKGR---LKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcCC---CChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 9999999999999999988443 889999999999999999999 8899999999999999999 99999999999
Q ss_pred ccccCCCCCCccccccccceeccccccCCC-CC-ccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCc
Q 001274 954 KLIDLPYSKSMSAIAGSYGYIAPEYAYTMK-VT-EKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTS 1031 (1109)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1109)
.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++ .......+....+.....
T Consensus 169 ~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d----~~~~~l~~ki~~~~~~~p 243 (370)
T KOG0583|consen 169 AISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD----SNVPNLYRKIRKGEFKIP 243 (370)
T ss_pred cccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC----ccHHHHHHHHhcCCccCC
Confidence 9774 2345567789999999999999988 85 789999999999999999999986 233333333333333222
Q ss_pred hhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1032 ELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
..++ ...+..++.+|+..+|.+|+++.+|+++-|...
T Consensus 244 ~~~~-------------S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 244 SYLL-------------SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCcC-------------CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 2221 245779999999999999999999998877765
No 33
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-39 Score=351.23 Aligned_cols=265 Identities=25% Similarity=0.392 Sum_probs=215.6
Q ss_pred hcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.....++++||+|.||.|.++....+..||||+++.. .+.....+|.+|+++|.+++||||++++|+|..+++.++|+|
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~-a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD-ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcc-cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 3456778999999999999999988899999999744 334456899999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc-CC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID-LP 959 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~-~~ 959 (1109)
||++|+|.+|+.++.... ...+...+|+.||+.||+||. +.++||||+.++|+|+++++++||+|||+++.+- .+
T Consensus 616 YmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 999999999998875432 455667789999999999999 7799999999999999999999999999999543 23
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh--CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT--GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
+.......+-+++|||||.+.-++++.++|||+||+++||+++ ...||..... +..++-.......... ..
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-e~vven~~~~~~~~~~--~~---- 764 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-EQVVENAGEFFRDQGR--QV---- 764 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-HHHHHhhhhhcCCCCc--ce----
Confidence 3444455677899999999999999999999999999999987 7789876542 2222222222222211 11
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
-..++..+...+.++|.+||..|-++||+++++...|.+.
T Consensus 765 ---~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 765 ---VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ---eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1122444556788999999999999999999999888653
No 34
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=327.59 Aligned_cols=269 Identities=25% Similarity=0.269 Sum_probs=213.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe--CCceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH--QDSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 878 (1109)
+.|+..+.|++|+||.||+|+++ +++.||+|+++.......-.-..++|+.++.+++|||||.+-.+... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 46888899999999999999976 68999999998665444444567899999999999999999988764 4578999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
||||+. +|...+...+.. +...++..++.|+++|++||| ...|+|||||++|+|+...|.+||+|||+||.+..
T Consensus 156 Me~~Eh-DLksl~d~m~q~--F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMKQP--FLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred HHHHHh-hHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 999976 999999887743 999999999999999999999 77899999999999999999999999999998874
Q ss_pred CCCCCccccccccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
+ ....+..+-|..|+|||.+.+.+ |+.+.||||+|||+.||+++++.|.+...-+ .+...+.....+.+...+.
T Consensus 230 p-~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d----Ql~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 230 P-LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID----QLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred C-cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH----HHHHHHHHhCCCccccCCC
Confidence 4 34467778899999999998765 9999999999999999999999998654332 2333333322222222211
Q ss_pred cchh-----------------hcccHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1038 LDLS-----------------AKRTVE-EMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1038 ~~~~-----------------~~~~~~-~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
+..- ..+... -.+..++++...+..||.+|-||.|.+++=+...
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 1100 000000 1245778999999999999999999998866554
No 35
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-41 Score=386.23 Aligned_cols=507 Identities=29% Similarity=0.347 Sum_probs=420.6
Q ss_pred EeccCccccccccccccCccccceeecccCccCCCCCccccCCCCCceEEccCCcccccCCchhhccccceEEEcccccc
Q 001274 77 VDLHGLNLSGILSPRICDLPRLVEFNISMNFVTGSIPTDLANCSSLEILDLCTNRLHGVIPFQLFFINTLRKLYLCENYI 156 (1109)
Q Consensus 77 l~l~~~~l~g~~~~~~~~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l 156 (1109)
+|.++.++. .||..+-.-..++.|+++.|.+-..--+...+.-+|+.|||++|++. ..|..+..+.+|+.|.++.|.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 455555544 34444444455888999988765321233444556999999999987 7999999999999999999999
Q ss_pred cccccccccCcCCCceEEeecCCCCCCCCcccccccccceeccccccccCCCCccccccccchhhhcccccccccCchhh
Q 001274 157 FGEIPEEIGNLTSLEELVIYSNNLTGAIPASISKLRQLRVIRAGHNSLSGPIPPEISECEGLEVLGLAQNSLEGFLPSEL 236 (1109)
Q Consensus 157 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l 236 (1109)
. ..|.+++++.+|++|.|.+|++. ..|.++..+++|++|+++.|++. .+|..+..+..++.+..++|..... +
T Consensus 81 ~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----l 153 (1081)
T KOG0618|consen 81 R-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----L 153 (1081)
T ss_pred h-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----h
Confidence 7 78899999999999999999998 89999999999999999999998 8999999999999999999933322 3
Q ss_pred hccccccceecccccccCCCCCCccccccccceeeeeccceecCchhhhccCccceEEeecccccCccCcccCCCCcCcE
Q 001274 237 EKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPKELGKLSRLKKLYVYTNELNGTIPHELGNCTSAVE 316 (1109)
Q Consensus 237 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 316 (1109)
+... ++.++|..|.+.+.++..+.+++. .|+|++|.+. ...+..+.+|+.|....|++... --..++|+.
T Consensus 154 g~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~ 223 (1081)
T KOG0618|consen 154 GQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSEL----EISGPSLTA 223 (1081)
T ss_pred cccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceE----EecCcchhe
Confidence 3333 899999999999999999998877 8999999987 34678899999999999998732 223478999
Q ss_pred EEccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCcccCCCCcchhcccccceEEcccccc
Q 001274 317 IDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDNHL 396 (1109)
Q Consensus 317 L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 396 (1109)
|+.++|.++...+ -....+|++++++.|++++ +|+|++.+.+|+.|+..+|+|+ .+|..+...++|+.|.+.+|.+
T Consensus 224 L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel 299 (1081)
T KOG0618|consen 224 LYADHNPLTTLDV--HPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNEL 299 (1081)
T ss_pred eeeccCcceeecc--ccccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhh
Confidence 9999999984433 2345789999999999995 4599999999999999999997 7899999999999999999999
Q ss_pred cccCCCcccccCcCcEEEeccccccCccchhhhcccc-cceeecCCccccCCCCCCCccccccceeecccccccccCCcc
Q 001274 397 EGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQK-LIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIE 475 (1109)
Q Consensus 397 ~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 475 (1109)
+ -+|......+.|++|||..|+|....+..|..+.. |..|+.+.|++.......=...+.|+.|++.+|+++...-..
T Consensus 300 ~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~ 378 (1081)
T KOG0618|consen 300 E-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPV 378 (1081)
T ss_pred h-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhh
Confidence 8 67888888999999999999998655555555554 899999999998665444456788999999999999877778
Q ss_pred ccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCC
Q 001274 476 FYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQ 555 (1109)
Q Consensus 476 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 555 (1109)
+.+..+|+.|+|++|++.......+.++..|++|+||+|+++ .+|..+.++..|++|...+|+|. ..| .+..++.|+
T Consensus 379 l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~ 455 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLK 455 (1081)
T ss_pred hccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcce
Confidence 889999999999999999776678889999999999999999 57899999999999999999998 778 899999999
Q ss_pred eeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcccceeeccCc
Q 001274 556 RLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGN 610 (1109)
Q Consensus 556 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 610 (1109)
.+|+|.|+|+...-..--.-++|++|||++|.-....-..|..+..+..+++.-|
T Consensus 456 ~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 456 VLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred EEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 9999999998543222222288999999999855455667777778877777766
No 36
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-38 Score=335.76 Aligned_cols=264 Identities=27% Similarity=0.415 Sum_probs=204.1
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhcc--CCCCceeeEEEEEEeCC----ce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGK--IRHRNIVKLYGFCYHQD----SN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~ 875 (1109)
...+..+++|+|+||.||+|.++ ++.||||++. ....+.|.+|-+|.+. ++|+||++++++-...+ +.
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 34455678999999999999986 5999999997 3356678888887665 58999999999877665 77
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhc------CCCCeEecCCCCCceeeCCCCceEEee
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYD------CRPHIIHRDIKSNNILLDEEFQAHVGD 949 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------~~~~ivH~Dlkp~NIll~~~~~~kl~D 949 (1109)
++|+||.+.|+|.+||..+. ++|.+..+|+..+++||+|||++ .+++|+|||||.+||||..|+++.|+|
T Consensus 284 wLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 89999999999999998764 89999999999999999999976 367899999999999999999999999
Q ss_pred ccccccccCCCC-CCccccccccceeccccccCCC-CC-----ccchhHHHHHHHHHHHhCCCCCCC--ccc--------
Q 001274 950 FGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMK-VT-----EKCDIYSFGVVLLELITGKSPVQS--LEL-------- 1012 (1109)
Q Consensus 950 FG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DvwSlGvll~elltg~~pf~~--~~~-------- 1012 (1109)
||+|..+..... .+....+||.+|||||++.+.. +. .+.||||+|.++|||+++..-++. ..+
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 999998763322 2234578999999999987653 22 368999999999999997654421 100
Q ss_pred --C-C---cHHH-HHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccC
Q 001274 1013 --G-G---DLVT-WVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVS 1085 (1109)
Q Consensus 1013 --~-~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 1085 (1109)
. . +..+ .+++..+..++ +.+. .-..+..+.+.+..||+.||+.|.|+.=|-+.+.+.....+
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p--~~W~---------~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIP--DAWR---------KHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCCh--hhhh---------cCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 0 0 1111 11111111111 1111 11445678899999999999999999999999999887776
Q ss_pred C
Q 001274 1086 D 1086 (1109)
Q Consensus 1086 ~ 1086 (1109)
.
T Consensus 509 ~ 509 (534)
T KOG3653|consen 509 D 509 (534)
T ss_pred c
Confidence 4
No 37
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-39 Score=323.60 Aligned_cols=249 Identities=21% Similarity=0.276 Sum_probs=205.8
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|+..+.||.|+||.|.+++.+ +|..+|+|++..... .....+...+|..+++.+.||.++++++.+.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 57889999999999999999966 689999999974422 1223456778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||++||.|..++++.+. +++..++.++.+|+.|++||| +.+|++||+||+|||+|.+|.+||+|||+|+...
T Consensus 124 eyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~-- 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS-- 195 (355)
T ss_pred eccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEec--
Confidence 99999999999998765 999999999999999999999 8899999999999999999999999999999765
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
....+.+||+.|+|||++..++|..++|.|||||++|||+.|..||.+... ...-.+...........
T Consensus 196 --~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~----~~iY~KI~~~~v~fP~~------ 263 (355)
T KOG0616|consen 196 --GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP----IQIYEKILEGKVKFPSY------ 263 (355)
T ss_pred --CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh----HHHHHHHHhCcccCCcc------
Confidence 335678999999999999999999999999999999999999999986543 12222222222222111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCC-----CCHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNR-----PTMREVIAMMI 1078 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~R-----Pt~~evl~~L~ 1078 (1109)
-...+.+++.+.++.|-.+| +-..+|..|-+
T Consensus 264 --------fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~w 299 (355)
T KOG0616|consen 264 --------FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPW 299 (355)
T ss_pred --------cCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcc
Confidence 12245688888899998888 34556665543
No 38
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.3e-38 Score=360.04 Aligned_cols=263 Identities=26% Similarity=0.439 Sum_probs=205.0
Q ss_pred hcCCCCCceEecCCcceEEEEEe------cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCC
Q 001274 801 TGNFSEGAVIGRGACGTVYKATL------ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQD 873 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 873 (1109)
.++|++.++||+|+||.||+|++ .+++.||||+++.. ......+.+.+|+.+++++ +||||++++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 36789999999999999999974 23568999998733 2233456789999999999 8999999999887654
Q ss_pred -ceEEEEEeccCCCHHHHhccCCC--------------------------------------------------------
Q 001274 874 -SNLLLYEYMENGSLGEQLHGNKQ-------------------------------------------------------- 896 (1109)
Q Consensus 874 -~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 896 (1109)
..++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 57899999999999999875321
Q ss_pred ---CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC-CCccccccccc
Q 001274 897 ---TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYG 972 (1109)
Q Consensus 897 ---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~ 972 (1109)
...+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++....... .......++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 123778889999999999999999 78999999999999999999999999999986532211 11223346788
Q ss_pred eeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHH
Q 001274 973 YIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTL 1051 (1109)
Q Consensus 973 y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
|+|||++.+..++.++|||||||++|||++ |..||.+..........+.. ... .. ........
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~---~~~-~~------------~~~~~~~~ 305 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD---GTR-MR------------APENATPE 305 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc---CCC-CC------------CCCCCCHH
Confidence 999999999999999999999999999997 99999864322222221111 110 00 00111235
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1052 FLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1052 ~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 306 l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 306 IYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 77999999999999999999999999987653
No 39
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6.1e-38 Score=343.04 Aligned_cols=260 Identities=25% Similarity=0.282 Sum_probs=209.1
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
..++|+..++||+|+||.||+|+-+ +|..+|+|+++...- .....+.+..|-.+|...++|+||+++-.|++.++.|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 3468999999999999999999854 699999999975422 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||++||++..+|.+.+. +++..++..+.+++-|++.+| +.|||||||||+|+|||..|++||+|||++..+.
T Consensus 219 iMEylPGGD~mTLL~~~~~---L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDT---LTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHHhcCc---CchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999999987664 999999999999999999999 8899999999999999999999999999985332
Q ss_pred C----------------------CCCC-----Cc-------------------cccccccceeccccccCCCCCccchhH
Q 001274 958 L----------------------PYSK-----SM-------------------SAIAGSYGYIAPEYAYTMKVTEKCDIY 991 (1109)
Q Consensus 958 ~----------------------~~~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~~~~~Dvw 991 (1109)
. +... .. ...+|||.|+|||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 1 0000 00 124699999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCC---
Q 001274 992 SFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRP--- 1068 (1109)
Q Consensus 992 SlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP--- 1068 (1109)
|+|||+|||+.|.+||.+..+.+.....+.....-..|.. .+...+..++|.+|+. ||++|-
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~--------------~~~s~eA~DLI~rll~-d~~~RLG~~ 437 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE--------------VDLSDEAKDLITRLLC-DPENRLGSK 437 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc--------------CcccHHHHHHHHHHhc-CHHHhcCcc
Confidence 9999999999999999875544333333332211111111 1111456789999999 999996
Q ss_pred CHHHHHHHHHHh
Q 001274 1069 TMREVIAMMIDA 1080 (1109)
Q Consensus 1069 t~~evl~~L~~~ 1080 (1109)
.+.||.+|-+..
T Consensus 438 G~~EIK~HPfF~ 449 (550)
T KOG0605|consen 438 GAEEIKKHPFFK 449 (550)
T ss_pred cHHHHhcCCccc
Confidence 588888776544
No 40
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=313.44 Aligned_cols=254 Identities=23% Similarity=0.337 Sum_probs=212.4
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++++.||+|.||.||.|+. +++..||+|++...... .....++.+|+++-..++||||.+++++|.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 6899999999999999999985 46888999999654221 233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||.++|++...++..... .+++.....++.|+|.|+.|+| .++||||||||+|+|++.++.+||+|||.+....
T Consensus 102 Eya~~gel~k~L~~~~~~-~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMK-RFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EecCCchHHHHHHhcccc-cccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 999999999999854432 3888899999999999999999 8899999999999999999999999999998643
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.....+.+||..|.+||+..+..++.++|+|++|++.||++.|..||+....++.+.+..+..+.
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~-------------- 240 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLK-------------- 240 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcccc--------------
Confidence 44556789999999999999999999999999999999999999999865422222222221111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.+........++|.+|+..+|.+|.+..|++++-+-.
T Consensus 241 ----~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 241 ----FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred ----CCcccChhHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence 1111223467899999999999999999999987643
No 41
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=347.54 Aligned_cols=264 Identities=24% Similarity=0.375 Sum_probs=220.3
Q ss_pred HHHHHhcCCCCCceEecCCcceEEEEEecC-CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc
Q 001274 796 NLLEATGNFSEGAVIGRGACGTVYKATLAN-GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 796 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 874 (1109)
+++....+.....+||-|.||.||.|.|+. .-.||||.++ .+....++|++|+.+|+.++|||+|+++|+|..+..
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK---EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh---hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 344444566777899999999999999874 5679999998 445678899999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.|||+|||.+|+|.+|+++.... .++....+.++.||+.||+||. .+++|||||.++|+||.++-.|||+|||+++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhh
Confidence 99999999999999999876543 3777788899999999999999 8899999999999999999999999999999
Q ss_pred cccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 955 LIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
.+..+......+...++.|.|||-+-...++.|+|||+|||++||+.| |-.||.+.+. ....+.+.+.++..
T Consensus 414 lMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-SqVY~LLEkgyRM~------ 486 (1157)
T KOG4278|consen 414 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYGLLEKGYRMD------ 486 (1157)
T ss_pred hhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-HHHHHHHhcccccc------
Confidence 987665555666677899999999999999999999999999999999 8899986431 11111222211111
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
.+..+...++++|..||+|.|.+||+++|+-+.++....+
T Consensus 487 ----------~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 487 ----------GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred ----------CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 1233456789999999999999999999999988876543
No 42
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-38 Score=330.59 Aligned_cols=252 Identities=22% Similarity=0.335 Sum_probs=212.7
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
.+|++.+.||+|.||+|-+|+. ..|+.||||.++..... ....-.+.+|++||..++||||+.++++|...+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4677888999999999999984 68999999998754332 233456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||..+|.|++|+.+.+. +++.+++.++.||+.|+.|+| +.+++|||||.+|||+|.++.+||+|||++..+.
T Consensus 133 EYaS~GeLYDYiSer~~---LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~-- 204 (668)
T KOG0611|consen 133 EYASGGELYDYISERGS---LSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA-- 204 (668)
T ss_pred EecCCccHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhc--
Confidence 99999999999988765 999999999999999999999 8899999999999999999999999999998775
Q ss_pred CCCCccccccccceeccccccCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKV-TEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
...-.++++|++-|.+||++.+.+| ++.+|-||+||++|-++.|..||++.+ ....++....+....
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D----hk~lvrQIs~GaYrE-------- 272 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD----HKRLVRQISRGAYRE-------- 272 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch----HHHHHHHhhcccccC--------
Confidence 3344578999999999999999998 578999999999999999999998643 334444333322110
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
++.+.....+|.+|+..+|++|.|..+|..|-|--
T Consensus 273 -------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 273 -------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred -------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 00111245789999999999999999999987643
No 43
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-38 Score=342.90 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=214.0
Q ss_pred cCCCCCceEecCCcceEEEEEec---CCc--EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA---NGE--VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
......++||+|.||.||+|... .|+ .||||..+... ..+..+.|++|+.+|+.++||||++++|+|.+ .+.+
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence 44556689999999999999743 233 58899887543 34457889999999999999999999999976 5789
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+|||.++.|.|..|++.++.. ++......++.||+.||+||| ++.+|||||.++||||.....+|++|||+++.+
T Consensus 467 ivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 999999999999999988765 899999999999999999999 889999999999999999999999999999998
Q ss_pred cCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 957 DLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
+.+.........-++.|||||.+..++++.++|||.|||++||++. |..||++....+.+ ..+.. .+.
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-~~iEn--GeR-------- 610 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-GHIEN--GER-------- 610 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-EEecC--CCC--------
Confidence 7655555555566889999999999999999999999999999998 99999976522211 10110 001
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
...+..++..++.++.+||.+||.+||++.++...|.++.+
T Consensus 611 ------lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 611 ------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11244556678899999999999999999999999988876
No 44
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=340.30 Aligned_cols=250 Identities=28% Similarity=0.390 Sum_probs=207.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
..|+..+.||+|.||.||+|.+. .++.||+|++.... .....+++.+|+.++..++++||.++++.+..+...+++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~-~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE-AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh-cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 35667789999999999999864 68999999997653 34456788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
||.||++.+.++.... +++.....|+++++.|+.|+| ..+.+|||||+.||++..+|.+|++|||++.......
T Consensus 92 y~~gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HhcCcchhhhhccCCC---CccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 9999999999986553 577788889999999999999 6799999999999999999999999999998776443
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
... .+++||+.|||||++.+..|+.|+||||+|++.+||.+|.+|+.+..+-.. .-.+| +-..+
T Consensus 166 ~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv---------lflIp--k~~PP---- 229 (467)
T KOG0201|consen 166 KRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV---------LFLIP--KSAPP---- 229 (467)
T ss_pred hcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE---------EEecc--CCCCC----
Confidence 333 788999999999999998999999999999999999999999986542100 00000 00011
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+.+|+..|++.+|+.||+|.+++++
T Consensus 230 --~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 230 --RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred --ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 1122334568899999999999999999999866
No 45
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-37 Score=341.50 Aligned_cols=249 Identities=24% Similarity=0.341 Sum_probs=200.1
Q ss_pred ceEecCCcceEEEEEecCCcEEEEEEeeccCCCcch-hHHHHHHHHHhccCCCCceeeEEEEEEe----CCceEEEEEec
Q 001274 808 AVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATA-DNSFLAEISTLGKIRHRNIVKLYGFCYH----QDSNLLLYEYM 882 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 882 (1109)
..||+|++|.||+|.+ +|+.||||+++........ .+.+.+|++++++++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 6899999999999998 5899999999754332222 4678899999999999999999999877 34678999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
++|+|.+++..... +++....+++.+++.|+.|||.. .+++||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~g~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~--- 176 (283)
T PHA02988 105 TRGYLREVLDKEKD---LSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP--- 176 (283)
T ss_pred CCCcHHHHHhhCCC---CChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhccc---
Confidence 99999999987543 88999999999999999999931 37889999999999999999999999999865422
Q ss_pred CccccccccceeccccccC--CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 963 SMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.. ..+.............
T Consensus 177 -~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~----~~~~~~~i~~~~~~~~--------- 242 (283)
T PHA02988 177 -PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT----TKEIYDLIINKNNSLK--------- 242 (283)
T ss_pred -cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHhcCCCCC---------
Confidence 123467889999999876 679999999999999999999999998543 2222222211111100
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
.+......+.+++.+||+.||++|||++|+++.|+....
T Consensus 243 ---~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 243 ---LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ---CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 011223468899999999999999999999999988754
No 46
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.6e-37 Score=345.23 Aligned_cols=267 Identities=21% Similarity=0.300 Sum_probs=205.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|+||+||+|+++ +++.||+|+++.........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36889999999999999999976 68899999997654444445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|++++.+..+..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEEMPN---GVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 999877765543322 3889999999999999999999 7899999999999999999999999999998764333
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh-------
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL------- 1033 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------- 1033 (1109)
........|++.|+|||++.+..++.++||||+||++|||++|+.||.+....+.... +.... ...+....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 232 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFT-IQKVL-GPLPAEQMKLFYSNP 232 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhh-CCCCHHHHHhhhccc
Confidence 3333456789999999999998999999999999999999999999986432111111 11100 00000000
Q ss_pred -h----hhhc----chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1034 -F----DKRL----DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1034 -~----~~~~----~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
+ .+.. .............+.+++.+|++.||++|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0 0000 00000011123468899999999999999999999875
No 47
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=375.21 Aligned_cols=506 Identities=28% Similarity=0.335 Sum_probs=257.6
Q ss_pred EEccCCcccccCCchhhccccceEEEcccccccccccccccCcCCCceEEeecCCCCCCCCcccccccccceeccccccc
Q 001274 125 LDLCTNRLHGVIPFQLFFINTLRKLYLCENYIFGEIPEEIGNLTSLEELVIYSNNLTGAIPASISKLRQLRVIRAGHNSL 204 (1109)
Q Consensus 125 L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l 204 (1109)
+|+|..++. .+|..+..-..++.|++..|.+-...-+.+.+.-.|+.|||++|++. ..|..+..+.+|+.|+++.|.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 344555554 45555544444666666666554322233333444677777776665 6666777777777777777777
Q ss_pred cCCCCccccccccchhhhcccccccccCchhhhccccccceecccccccCCCCCCccccccccceeeeeccceecCchhh
Q 001274 205 SGPIPPEISECEGLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPKEL 284 (1109)
Q Consensus 205 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l 284 (1109)
. ..|.+.+++.+|++|.|.+|.+. .+|..+..+++|+.|+++.|++. .+|..+..++.++.+..++|... ..+
T Consensus 81 ~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~----~~l 153 (1081)
T KOG0618|consen 81 R-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKI----QRL 153 (1081)
T ss_pred h-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhh----hhh
Confidence 6 56666677777777777777766 56777777777777777777776 66777777777777777777222 122
Q ss_pred hccCccceEEeecccccCccCcccCCCCcCcEEEccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccE
Q 001274 285 GKLSRLKKLYVYTNELNGTIPHELGNCTSAVEIDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHK 364 (1109)
Q Consensus 285 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 364 (1109)
+... .+.+++..|.+.+.++..+.+++. .|||++|.+.. -.+..+++|+.|....|++.... -..++|+.
T Consensus 154 g~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~ 223 (1081)
T KOG0618|consen 154 GQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELE----ISGPSLTA 223 (1081)
T ss_pred cccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhhh---hhhhhccchhhhhhhhcccceEE----ecCcchhe
Confidence 3322 666677777776666666666555 57777776651 12334445555555555444211 12244555
Q ss_pred EEcccCcccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCCccc
Q 001274 365 LDLSINNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRL 444 (1109)
Q Consensus 365 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l 444 (1109)
|+.++|.++...+. + --.+|+.++++.|+++ .+|++++.+.+|+.++..+|++. .+|..+...++|++|.+..|.+
T Consensus 224 L~a~~n~l~~~~~~-p-~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel 299 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVH-P-VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNEL 299 (1081)
T ss_pred eeeccCcceeeccc-c-ccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhh
Confidence 55555555422111 1 1123445555555554 23345555555555555555552 3444444445555555555555
Q ss_pred cCCCCCCCccccccceeecccccccccCCccccCCcc-cceeccccccccCCCCccccccccccEEEccCCccCCCCChh
Q 001274 445 SGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQN-LSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSE 523 (1109)
Q Consensus 445 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 523 (1109)
. -+|+....+++|++|+|..|+|....+..|.-+.. |+.|+.+.|++....--.=..++.|+.|++.+|.+++..-..
T Consensus 300 ~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~ 378 (1081)
T KOG0618|consen 300 E-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPV 378 (1081)
T ss_pred h-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhh
Confidence 4 23334444445555555555554222222222221 444444444444221111112233444444444444433333
Q ss_pred hcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcccc
Q 001274 524 VGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLT 603 (1109)
Q Consensus 524 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 603 (1109)
+.+.++|+.|+|++|+|.......+.++..|++|+||+|.++ .+|..+..+..|++|...+|++. ..| .+..++.|+
T Consensus 379 l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~ 455 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLK 455 (1081)
T ss_pred hccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcce
Confidence 444444444444444444222223334444444444444444 34444444444444444444443 223 334444444
Q ss_pred eeeccCccccccccccccccchhhhhhccCCcccccc-ccccccCccccceeecCCCccccCCchhhhccccceEEEccC
Q 001274 604 ELQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGV-IPYELGNLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLSN 682 (1109)
Q Consensus 604 ~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls~ 682 (1109)
. +|+|.|+|+.. +|..... ++|++|||++|.-.-.--..|..+.++..+++.-
T Consensus 456 ~-------------------------lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~ 509 (1081)
T KOG0618|consen 456 V-------------------------LDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITL 509 (1081)
T ss_pred E-------------------------EecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhhhhheeccc
Confidence 4 44444444422 3333322 6788888888874323334566666666666665
Q ss_pred c
Q 001274 683 N 683 (1109)
Q Consensus 683 N 683 (1109)
|
T Consensus 510 ~ 510 (1081)
T KOG0618|consen 510 N 510 (1081)
T ss_pred C
Confidence 5
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-36 Score=339.54 Aligned_cols=256 Identities=26% Similarity=0.298 Sum_probs=203.2
Q ss_pred CCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 804 FSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
|+..+.||+|+||+||+|+. .+++.||+|++...... ......+.+|++++++++|++|+++++++...+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999986 47899999998644221 22345678999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++|+|.+++..... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++..... .
T Consensus 82 ~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--~ 155 (285)
T cd05631 82 MNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE--G 155 (285)
T ss_pred cCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC--C
Confidence 999999988864332 23899999999999999999999 78999999999999999999999999999986532 1
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......||..|+|||++.+..++.++||||+||++|||++|+.||............... ..... ..+
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~---~~~------- 224 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR-VKEDQ---EEY------- 224 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH-hhccc---ccC-------
Confidence 2223457899999999999999999999999999999999999999864322111111111 11100 000
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPT-----MREVIAMMID 1079 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~~ 1079 (1109)
.......+.+++.+||+.||++||+ +++++++-+.
T Consensus 225 ---~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~ 264 (285)
T cd05631 225 ---SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIF 264 (285)
T ss_pred ---CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhh
Confidence 1111235778999999999999997 8999987543
No 49
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=329.54 Aligned_cols=268 Identities=23% Similarity=0.261 Sum_probs=209.2
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC------------cchhHHHHHHHHHhccCCCCceeeEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG------------ATADNSFLAEISTLGKIRHRNIVKLY 866 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~~E~~~l~~l~h~niv~l~ 866 (1109)
..++|++.+.||+|.||.|-+|+.. +++.||||++...... ....+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3478999999999999999999965 7999999999654211 11225788999999999999999999
Q ss_pred EEEEeC--CceEEEEEeccCCCHHHHhccCCCCCC-CChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC
Q 001274 867 GFCYHQ--DSNLLLYEYMENGSLGEQLHGNKQTCL-LDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF 943 (1109)
Q Consensus 867 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~ 943 (1109)
++..+. +..|+|+|||..|.+.. .. ..+. +++.++++++.+++.||+||| .+|||||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w-~p---~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKW-CP---PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCcccc-CC---CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCC
Confidence 998764 56799999999887632 22 2223 899999999999999999999 77999999999999999999
Q ss_pred ceEEeeccccccccCC----CCCCccccccccceeccccccCCC----CCccchhHHHHHHHHHHHhCCCCCCCcccCCc
Q 001274 944 QAHVGDFGLAKLIDLP----YSKSMSAIAGSYGYIAPEYAYTMK----VTEKCDIYSFGVVLLELITGKSPVQSLELGGD 1015 (1109)
Q Consensus 944 ~~kl~DFG~a~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvll~elltg~~pf~~~~~~~~ 1015 (1109)
++||+|||.+..+... ........+||+.|+|||...++. .+.+.||||+||++|.|+.|+.||-+. .
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~----~ 323 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD----F 323 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc----h
Confidence 9999999999866221 111224578999999999988733 357899999999999999999999742 2
Q ss_pred HHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccCCCCCC
Q 001274 1016 LVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVSDYPSS 1090 (1109)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~ 1090 (1109)
..+...+...+.... . ...+..+.+.++|.++++.||++|.+..+|..|.|..........+.
T Consensus 324 ~~~l~~KIvn~pL~f----------P--~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~~~s~ 386 (576)
T KOG0585|consen 324 ELELFDKIVNDPLEF----------P--ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSPQSSE 386 (576)
T ss_pred HHHHHHHHhcCcccC----------C--CcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCCccCC
Confidence 223333322222111 1 12244567889999999999999999999999999887765554433
No 50
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.8e-37 Score=346.78 Aligned_cols=251 Identities=20% Similarity=0.230 Sum_probs=205.8
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||+||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999975 689999999974322 1223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++...+. +++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~- 153 (291)
T cd05612 81 EYVPGGELFSYLRNSGR---FSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD- 153 (291)
T ss_pred eCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-
Confidence 99999999999976543 889999999999999999999 78999999999999999999999999999986542
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
......|++.|+|||++.+..++.++||||+||++|||++|+.||.... ................
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~----~~~~~~~i~~~~~~~~-------- 218 (291)
T cd05612 154 ---RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN----PFGIYEKILAGKLEFP-------- 218 (291)
T ss_pred ---CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCcCCC--------
Confidence 2234568999999999999999999999999999999999999997532 2222222222211111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHHHHh
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPT-----MREVIAMMIDA 1080 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~~~ 1080 (1109)
......+.+++.+|++.||.+||+ +.|++++-+..
T Consensus 219 ------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 219 ------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred ------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 011235678999999999999995 99999887654
No 51
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=347.75 Aligned_cols=243 Identities=27% Similarity=0.360 Sum_probs=202.4
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 878 (1109)
++|...++||+|.||+|++|..+ +++.||||+++.... ..++.+..+.|.+|+... +||.++.++..|+..++.|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 68999999999999999999976 688999999986643 344567788898888777 699999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+.||++..+.+.. .+++..++.++..|+.||+||| +++|||||||.+|||+|.+|++||+|||+++..-
T Consensus 448 mey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m- 519 (694)
T KOG0694|consen 448 MEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM- 519 (694)
T ss_pred EEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccC-
Confidence 9999999954443322 2999999999999999999999 8899999999999999999999999999998543
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.......+++||+.|+|||++.+..|+.++|.|||||++|||+.|..||.+..+ +++++..+
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE------------------ee~FdsI~ 581 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE------------------EEVFDSIV 581 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH------------------HHHHHHHh
Confidence 133456789999999999999999999999999999999999999999986431 22222222
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTM 1070 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~ 1070 (1109)
.....++.-...+...++.+++..+|++|.-+
T Consensus 582 ~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 582 NDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred cCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 22223334444567899999999999999766
No 52
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-37 Score=323.43 Aligned_cols=272 Identities=26% Similarity=0.327 Sum_probs=212.8
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe-----CCc
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH-----QDS 874 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 874 (1109)
..+|...+.||+|+||.|+.|.++ +|+.||||++..........++-.+|++++++++|+||+.+.+++.. -..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 356666789999999999999865 78999999998665666677889999999999999999999999876 245
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.|+|+|+| +.+|.+.++.... ++.+.+..++.||++|+.|+| +.+|+|||+||.|++++.+..+||+|||+|+
T Consensus 101 vYiV~elM-etDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eEEehhHH-hhHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEecccccee
Confidence 79999999 5699999987654 899999999999999999999 8899999999999999999999999999999
Q ss_pred cccCC-CCCCccccccccceecccccc-CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCch
Q 001274 955 LIDLP-YSKSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSE 1032 (1109)
Q Consensus 955 ~~~~~-~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1109)
..... ....++.++.|..|+|||++. ...|+.+.||||.||++.||++|+.-|.+.. ....+.....-...+++
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d----~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD----YVHQLQLILELLGTPSE 249 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc----hHHHHHHHHHhcCCCCH
Confidence 87532 233457889999999999875 5679999999999999999999999998643 22222222221111111
Q ss_pred hhhhhcc------------hhh-----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1033 LFDKRLD------------LSA-----KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1033 ~~~~~~~------------~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
.....+. ... ...........+++.+|+..||.+|+|++|+++|---..-.
T Consensus 250 e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 250 EDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH 317 (359)
T ss_pred HHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence 1111110 000 01112224578999999999999999999999996555433
No 53
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.6e-37 Score=352.91 Aligned_cols=260 Identities=26% Similarity=0.435 Sum_probs=206.1
Q ss_pred hcCCCCCceEecCCcceEEEEEe------cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCC
Q 001274 801 TGNFSEGAVIGRGACGTVYKATL------ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQD 873 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 873 (1109)
.++|++.++||+|+||+||+|++ .++..||||+++... .....+.+.+|+++++.+ +||||++++++|...+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 35788999999999999999963 246689999986432 233456788999999999 8999999999999999
Q ss_pred ceEEEEEeccCCCHHHHhccCCC---------------------------------------------------------
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQ--------------------------------------------------------- 896 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 896 (1109)
..++||||+++|+|.++++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 99999999999999999865321
Q ss_pred ---------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 897 ---------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 897 ---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
...+++..+.+++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 113788899999999999999999 77999999999999999999999999999986543221
Q ss_pred CC-ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 962 KS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 962 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.. .....++..|+|||++.+..++.++|||||||++|||++ |..||............+........+
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 339 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSP---------- 339 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCC----------
Confidence 11 122345678999999999999999999999999999998 889987654333333333322111100
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
......+.+++.+||+.||++||+|.||+++|++.
T Consensus 340 ------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 00123578999999999999999999999999864
No 54
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.4e-36 Score=340.28 Aligned_cols=263 Identities=24% Similarity=0.397 Sum_probs=201.9
Q ss_pred cCCCCCceEecCCcceEEEEEecC-----------------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceee
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN-----------------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVK 864 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 864 (1109)
++|++.++||+|+||.||+|++++ +..||+|.+.... ......++.+|++++.+++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 578899999999999999997532 3469999886432 2334567999999999999999999
Q ss_pred EEEEEEeCCceEEEEEeccCCCHHHHhccCCC----------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 001274 865 LYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQ----------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHII 928 (1109)
Q Consensus 865 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 928 (1109)
+++++...+..++||||+++|+|.+++..... ...+++..+.+++.||+.|++||| +.+|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCcc
Confidence 99999999999999999999999999854321 123688889999999999999999 77999
Q ss_pred ecCCCCCceeeCCCCceEEeeccccccccCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh--CCC
Q 001274 929 HRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT--GKS 1005 (1109)
Q Consensus 929 H~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt--g~~ 1005 (1109)
||||||+||+++.++.+||+|||+++........ ......++..|+|||++.++.++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999865322211 1223345788999999998899999999999999999987 566
Q ss_pred CCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1006 PVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1006 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
||...... .....+......... .... .........+.+++.+||+.||++|||+.+|.+.|+
T Consensus 241 p~~~~~~~-~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 241 PYGELTDE-QVIENAGEFFRDQGR--QVYL-------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCcCCHH-HHHHHHHHHhhhccc--cccc-------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 77654321 222222221111100 0000 001122346789999999999999999999998875
No 55
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.4e-36 Score=333.26 Aligned_cols=256 Identities=20% Similarity=0.324 Sum_probs=203.9
Q ss_pred cCCCCCceEecCCcceEEEEEec----CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA----NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
.+|++.+.||+|+||.||+|.++ .+..||+|+++.... ......+.+|+.++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 46888999999999999999753 366899999874422 2334678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||+++|+|.+++..... .+++..++.++.|++.|++||| +.+++||||||+||+++.++.++++|||.+....
T Consensus 84 v~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999976543 3899999999999999999999 7799999999999999999999999999876543
Q ss_pred CCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
...........++..|+|||++.+..++.++|||||||++||+++ |+.||..... .+.+........ ..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~----~~~~~~~~~~~~-~~----- 228 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG----QDVIKAVEDGFR-LP----- 228 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH----HHHHHHHHCCCC-CC-----
Confidence 211111122345678999999999999999999999999999876 9999975432 122222111110 00
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
........+.+++.+||+.+|++||++.++.+.|.+.
T Consensus 229 -------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 229 -------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0111234578899999999999999999999998764
No 56
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.9e-37 Score=347.18 Aligned_cols=245 Identities=22% Similarity=0.261 Sum_probs=199.2
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
+.||+|+||.||+|+.+ +|+.||+|+++.... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 689999999974322 2233456788999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcc
Q 001274 886 SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMS 965 (1109)
Q Consensus 886 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 965 (1109)
+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.... ......
T Consensus 81 ~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~-~~~~~~ 153 (323)
T cd05571 81 ELFFHLSRERV---FSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS-DGATMK 153 (323)
T ss_pred cHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc-CCCccc
Confidence 99999976543 899999999999999999999 78999999999999999999999999999875321 122334
Q ss_pred ccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhccc
Q 001274 966 AIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRT 1045 (1109)
Q Consensus 966 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............... .
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~----~~~~~~~~~~~~~~~--------------p 215 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----HEKLFELILMEEIRF--------------P 215 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC----HHHHHHHHHcCCCCC--------------C
Confidence 5679999999999999999999999999999999999999997532 222222222111111 0
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 001274 1046 VEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMM 1077 (1109)
Q Consensus 1046 ~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L 1077 (1109)
......+.+++.+||+.||++|| ++.+++++-
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~ 252 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR 252 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence 11123567899999999999999 899998764
No 57
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=321.85 Aligned_cols=275 Identities=25% Similarity=0.358 Sum_probs=212.3
Q ss_pred CCHHHHHHHhcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhcc--CCCCceeeEEEEE
Q 001274 792 FKYHNLLEATGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGK--IRHRNIVKLYGFC 869 (1109)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~ 869 (1109)
..+--.....++....+.||+|.||+||+|++. |+.||||++..+ +++.+.+|.++++. ++|+||..+++.-
T Consensus 201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD 274 (513)
T KOG2052|consen 201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAAD 274 (513)
T ss_pred chhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhcc
Confidence 333334455567888899999999999999996 899999999844 44567777777665 5999999999986
Q ss_pred EeCC----ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhc-----CCCCeEecCCCCCceeeC
Q 001274 870 YHQD----SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYD-----CRPHIIHRDIKSNNILLD 940 (1109)
Q Consensus 870 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIll~ 940 (1109)
..+. ..++|++|.+.|||++||..+. ++.+..++++..+|.||+|||.+ .++.|.|||||..||||.
T Consensus 275 ~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK 350 (513)
T KOG2052|consen 275 NKDNGSWTQLWLVTDYHEHGSLYDYLNRNT----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 350 (513)
T ss_pred ccCCCceEEEEEeeecccCCcHHHHHhhcc----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc
Confidence 5543 4589999999999999998743 89999999999999999999954 477899999999999999
Q ss_pred CCCceEEeeccccccccCCC---CCCccccccccceeccccccCCC----C--CccchhHHHHHHHHHHHhC--------
Q 001274 941 EEFQAHVGDFGLAKLIDLPY---SKSMSAIAGSYGYIAPEYAYTMK----V--TEKCDIYSFGVVLLELITG-------- 1003 (1109)
Q Consensus 941 ~~~~~kl~DFG~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~----~--~~~~DvwSlGvll~elltg-------- 1003 (1109)
.++.+.|+|+|+|....... .......+||.+|||||++...- | -..+||||||.++||+.-+
T Consensus 351 kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~e 430 (513)
T KOG2052|consen 351 KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVE 430 (513)
T ss_pred cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEeh
Confidence 99999999999998775432 12235568999999999986432 2 2369999999999999753
Q ss_pred --CCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1004 --KSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1004 --~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
+.||.+.-+.+.-.+-+++.+-... ..+.++.+ -...+....+.++|..||..+|..|-|+-.+.+.+.++.
T Consensus 431 ey~~Pyyd~Vp~DPs~eeMrkVVCv~~-~RP~ipnr-----W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 431 EYQLPYYDVVPSDPSFEEMRKVVCVQK-LRPNIPNR-----WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred hhcCCcccCCCCCCCHHHHhcceeecc-cCCCCCcc-----cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 3577766544444444443322211 11111111 125567788999999999999999999999999998886
Q ss_pred h
Q 001274 1082 Q 1082 (1109)
Q Consensus 1082 ~ 1082 (1109)
+
T Consensus 505 ~ 505 (513)
T KOG2052|consen 505 N 505 (513)
T ss_pred c
Confidence 5
No 58
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=345.65 Aligned_cols=249 Identities=24% Similarity=0.273 Sum_probs=204.4
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||+||+|+++ +++.||+|+++.... .....+.+.+|++++++++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57888999999999999999975 689999999974321 1233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~- 170 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGR---FPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD- 170 (329)
T ss_pred cCCCCChHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC-
Confidence 99999999999976543 789999999999999999999 78999999999999999999999999999986542
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.. ..+..........+....
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~p~~------ 237 (329)
T PTZ00263 171 ---RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT----PFRIYEKILAGRLKFPNW------ 237 (329)
T ss_pred ---CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC----HHHHHHHHhcCCcCCCCC------
Confidence 2234578999999999999999999999999999999999999997432 222222222221111111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPT-----MREVIAMMI 1078 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~ 1078 (1109)
....+.+++.+||+.||++||+ ++++++|-+
T Consensus 238 --------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~ 273 (329)
T PTZ00263 238 --------FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPY 273 (329)
T ss_pred --------CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCc
Confidence 1134678999999999999997 799987754
No 59
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.4e-36 Score=330.10 Aligned_cols=251 Identities=26% Similarity=0.376 Sum_probs=203.4
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
.+|++.+.||+|+||.||+|+++++..+|+|.+... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG---AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC---CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 457888999999999999999888889999987632 22346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++|+|.++++.... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||.++.......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 81 MENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 999999999976443 3889999999999999999999 77999999999999999999999999999986542222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+.+........+.. +
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~----~~~~~~~i~~~~~~~~----~---- 223 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS----NYEVVEMISRGFRLYR----P---- 223 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHHHCCCCCCC----C----
Confidence 22233345678999999998899999999999999999999 899987532 2222222222111100 0
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
......+.+++.+||+.+|++||+++++++.|
T Consensus 224 -----~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 224 -----KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -----CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 01123578999999999999999999999876
No 60
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-37 Score=339.04 Aligned_cols=253 Identities=25% Similarity=0.372 Sum_probs=217.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc-eEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS-NLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 879 (1109)
++|..++++|+|+||.++.++++ ++..||+|++..........+...+|+.++++++|||||.+.+.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888999999999999999865 68899999998877766667788999999999999999999999999888 89999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
+||+||++.+.+.+.+. ..++++.+..++.|++.|+.||| +..|+|||||+.||+++.++.|||+|||+|+....+
T Consensus 84 ~Y~eGg~l~~~i~~~k~-~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKG-VLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 99999999999987762 34999999999999999999999 779999999999999999999999999999988743
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CCchhhhhhc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PTSELFDKRL 1038 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1038 (1109)
. ......+||+.|+.||.+.+.+|..|+||||+||++|||++-+++|.+.. ....+.+...... |.
T Consensus 160 ~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~----m~~Li~ki~~~~~~Pl-------- 226 (426)
T KOG0589|consen 160 D-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN----MSELILKINRGLYSPL-------- 226 (426)
T ss_pred h-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc----hHHHHHHHhhccCCCC--------
Confidence 2 34567899999999999999999999999999999999999999998643 3344444333331 11
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
+......+..++..|++.+|+.||++.+++.+.
T Consensus 227 ------p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 227 ------PSMYSSELRSLVKSMLRKNPEHRPSALELLRRP 259 (426)
T ss_pred ------CccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence 222234577999999999999999999999873
No 61
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.6e-36 Score=350.29 Aligned_cols=260 Identities=28% Similarity=0.439 Sum_probs=204.7
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCc
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 874 (1109)
++|++.+.||+|+||.||+|++. ++..||||+++.... ......+.+|+++++.+ +|+||++++++|...+.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 57889999999999999999742 245799999974422 23456788999999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCC----------------------------------------------------------
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQ---------------------------------------------------------- 896 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 896 (1109)
.++||||+++|+|.++++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999999864321
Q ss_pred ---------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC-ccc
Q 001274 897 ---------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS-MSA 966 (1109)
Q Consensus 897 ---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-~~~ 966 (1109)
...+++..+.+++.||++||+||| +++|+||||||+||+++.++.+||+|||+++......... ...
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 123788889999999999999999 7899999999999999999999999999998654222111 122
Q ss_pred cccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhccc
Q 001274 967 IAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRT 1045 (1109)
Q Consensus 967 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
..++..|+|||++.+..++.++|||||||++|||++ |+.||............+........+
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~---------------- 337 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRP---------------- 337 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCC----------------
Confidence 335678999999999999999999999999999998 999998644322222222211110000
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1046 VEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1046 ~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
......+.+++.+||+.||++||++.+++++|+++.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 001235789999999999999999999999998864
No 62
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-36 Score=344.63 Aligned_cols=272 Identities=24% Similarity=0.374 Sum_probs=208.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|+||.||+|++. ++..||+|.+.... .....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 68899999999999999999875 68889999887432 22345679999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++|+|.+++..... +++..+..++.|++.|+.|||+. .+|+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 156 (331)
T cd06649 84 HMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 156 (331)
T ss_pred cCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccc--
Confidence 9999999999976543 88999999999999999999932 3699999999999999999999999999976532
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhcc-C--C--------
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEM-V--P-------- 1029 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~--~-------- 1029 (1109)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ..+...+....... . +
T Consensus 157 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 157 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA-KELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred -cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHhcccccccccCCccccCcccc
Confidence 222345789999999999999999999999999999999999999975321 11111111000000 0 0
Q ss_pred ---------------C---chhhhhhcch--hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1030 ---------------T---SELFDKRLDL--SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1030 ---------------~---~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
. .+..+..... ...........+.+++.+||+.||++|||+.|++++.+.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0 0000000000 0000111234688999999999999999999999998765433
No 63
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.6e-36 Score=334.96 Aligned_cols=263 Identities=22% Similarity=0.340 Sum_probs=200.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.++||+|+||+||+|+.+ +++.||+|+++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 57899999999999999999865 689999999874432 2234567899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++ +|.+++..... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~-~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~- 156 (288)
T cd07871 84 YLDS-DLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP- 156 (288)
T ss_pred CCCc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC-
Confidence 9974 99998876543 3788999999999999999999 789999999999999999999999999999765422
Q ss_pred CCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CCchhhhhh-
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PTSELFDKR- 1037 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 1037 (1109)
........+++.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... +.+........ +..+.+...
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK----EELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCChHHhhccc
Confidence 122234568899999998875 56899999999999999999999999754322 21211111100 011111000
Q ss_pred --------c----chh--hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1038 --------L----DLS--AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1038 --------~----~~~--~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
. ... ..........+.+++.+|++.||.+|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 000 00001112356799999999999999999999876
No 64
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3e-37 Score=305.07 Aligned_cols=262 Identities=24% Similarity=0.344 Sum_probs=205.5
Q ss_pred cCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----ce
Q 001274 802 GNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-----SN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 875 (1109)
++|++.+.+|+|||+.||.++ ..+++.||+|++.... .+..+..++|++..++++|||+++++++...+. ..
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 689999999999999999998 5678999999997654 346678899999999999999999998875543 47
Q ss_pred EEEEEeccCCCHHHHhccCCCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQT-CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
|++++|...|+|.+.+...+.+ ..+++.+.++|+.+|++||++||+. ..+++||||||.||++.+++.+++.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999999765433 3599999999999999999999955 4459999999999999999999999999987
Q ss_pred cccCCCCCCc--------cccccccceeccccccC---CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHh
Q 001274 955 LIDLPYSKSM--------SAIAGSYGYIAPEYAYT---MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRS 1023 (1109)
Q Consensus 955 ~~~~~~~~~~--------~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~ 1023 (1109)
.......... .....|..|+|||.+.- ...++++|||||||++|+|+.|..||+.....+.-...
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL---- 253 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL---- 253 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE----
Confidence 6532211111 23357899999998863 44789999999999999999999999743211110000
Q ss_pred hhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1024 IHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.+....+.. .......+.+.+++.+|++.||.+||++.+++..+...
T Consensus 254 --------Av~n~q~s~--P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 254 --------AVQNAQISI--PNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred --------eeecccccc--CCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 000111111 11222456788999999999999999999999988764
No 65
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=311.02 Aligned_cols=257 Identities=22% Similarity=0.284 Sum_probs=207.8
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+.|++.+.||+|.|+.||++.. .+|+.+|+|++....-.....+++.+|++|.+.++|||||++.+.+......|+|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 5677778899999999999864 579999999987665555567889999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC---CCCceEEeecccccccc
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD---EEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DFG~a~~~~ 957 (1109)
+|+|++|..-+-... ..++..+-..++||++++.|+| ..+|||||+||+|+++. ..-.+|++|||+|....
T Consensus 91 ~m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 91 LVTGGELFEDIVARE---FYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred cccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999977665432 2788888899999999999999 78999999999999994 34469999999999876
Q ss_pred CCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
......+.+|||+|||||++...+|+..+|||+.||++|-++.|+.||.+-.. ..+.+.+. .+........
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-~rlye~I~---~g~yd~~~~~--- 235 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYEQIK---AGAYDYPSPE--- 235 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-HHHHHHHh---ccccCCCCcc---
Confidence 44455778999999999999999999999999999999999999999985321 22222222 2222111100
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
-....+...+++.+|+..||.+|.|+.|.+.|-|-.
T Consensus 236 -------w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 236 -------WDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred -------cCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence 011123456899999999999999999998776543
No 66
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-37 Score=323.00 Aligned_cols=263 Identities=26% Similarity=0.289 Sum_probs=198.4
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc-----eE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS-----NL 876 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~ 876 (1109)
.|...+++|.|+||.||+|... +++.||||++-.... .-.+|+++|+.++|||||++.-+|..... ..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 5677889999999999999854 579999999963322 22379999999999999999998875432 24
Q ss_pred EEEEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-CceEEeeccccc
Q 001274 877 LLYEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE-FQAHVGDFGLAK 954 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~ 954 (1109)
+|||||+. +|.++++... ....++...++-++.||++|+.||| +.+|+||||||.|+|+|.+ |.+||||||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999986 9998887421 1123888889999999999999999 7899999999999999976 899999999999
Q ss_pred cccCCCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhh-------hc
Q 001274 955 LIDLPYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSI-------HE 1026 (1109)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~-------~~ 1026 (1109)
.... ......+..|..|+|||.+.+. .|+.+.||||.||++.||+-|+.-|.+.+..+.+++.++-.- ..
T Consensus 175 ~L~~--~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 175 VLVK--GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eecc--CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 8763 3444667789999999998875 599999999999999999999999987554444444433211 11
Q ss_pred cCCCc-hhhhhhcchhh---cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1027 MVPTS-ELFDKRLDLSA---KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1027 ~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
+.+.. +.-.+.+.... -..........+++.+++..+|.+|.++.|++.+-
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 11100 00000110000 01223335578999999999999999999999773
No 67
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2e-36 Score=345.21 Aligned_cols=258 Identities=22% Similarity=0.238 Sum_probs=206.4
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||.||+|++. +++.||||+++.... .......+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46889999999999999999976 589999999975422 1234467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... +++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLGV---LSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 99999999999976543 889999999999999999999 77999999999999999999999999999986542
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. ..+.. ...........++
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~~i~~-~~~~~~~~~~~~~--- 225 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW-ENLKY-WKETLQRPVYDDP--- 225 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH-HHHHh-ccccccCCCCCcc---
Confidence 234557899999999999999999999999999999999999999754321111 11111 0010000000000
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......+.+++.+|+..+|++||++.+++++-+.
T Consensus 226 -----~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~ 260 (333)
T cd05600 226 -----RFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFF 260 (333)
T ss_pred -----ccccCHHHHHHHHHHhhChhhhcCCHHHHHhCccc
Confidence 01123457789999999999999999999988543
No 68
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.8e-36 Score=336.27 Aligned_cols=268 Identities=22% Similarity=0.365 Sum_probs=202.7
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
.++|++.++||+|+||+||+|+.. +++.||||+++.... ......+.+|+++++.++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 368999999999999999999976 689999999874432 223446788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||++ +++.+++..... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 83 EYVH-TDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred ECCC-cCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 9995 688888866543 3888999999999999999999 789999999999999999999999999999754322
Q ss_pred CCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhcc-CCCchhhh--
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEM-VPTSELFD-- 1035 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 1035 (1109)
........+++.|+|||++.+ ..++.++||||+||++|||++|+.||.+... ..+.+....... .+....+.
T Consensus 157 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 157 -SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD---IQDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred -CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc---HHHHHHHHHHHhCCCChhhccch
Confidence 222344568899999998875 4588999999999999999999999986432 222222111100 00000000
Q ss_pred --------hhcchhhccc-------HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1036 --------KRLDLSAKRT-------VEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1036 --------~~~~~~~~~~-------~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......... ......+.+++.+|++.||++|||+.|++++-+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f 291 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF 291 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccc
Confidence 0000000000 0011346789999999999999999999987654
No 69
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.9e-36 Score=342.06 Aligned_cols=256 Identities=23% Similarity=0.238 Sum_probs=203.2
Q ss_pred CCCCCceEecCCcceEEEEEe----cCCcEEEEEEeeccCC--CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCce
Q 001274 803 NFSEGAVIGRGACGTVYKATL----ANGEVIAVKKIKLRGE--GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 875 (1109)
+|++.+.||+|+||+||+|+. .+++.||+|++..... .....+.+.+|+++++++ +|++|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999975 3588999999964321 122345678899999999 589999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++||||+++|+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDN---FSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 999999999999999976543 899999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCCCccccccccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 956 IDLPYSKSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
.............||+.|+|||++.+.. ++.++||||+||++|||++|+.||.....................+..
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--- 231 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFP--- 231 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCC---
Confidence 5433333334567999999999988654 789999999999999999999999754333333332222222111111
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHH
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMI 1078 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~ 1078 (1109)
......+.+++.+||+.||++|| ++++++++-+
T Consensus 232 -----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 269 (332)
T cd05614 232 -----------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF 269 (332)
T ss_pred -----------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence 11123567899999999999999 7889987743
No 70
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.2e-36 Score=317.96 Aligned_cols=267 Identities=22% Similarity=0.301 Sum_probs=207.2
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCc-eeeEEEEEEeCC------
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRN-IVKLYGFCYHQD------ 873 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 873 (1109)
..|...++||+|+||+||+|+.+ +|+.||+|++......+.......+|+.+++.++|+| ||++++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34566678999999999999854 7899999999877554445567789999999999999 999999998877
Q ss_pred ceEEEEEeccCCCHHHHhccCCCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQT-CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
..++|+||++ -+|..++...... ..++...+..++.||+.|++||| +++|+||||||+||+++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 6789999995 5999999876532 23777889999999999999999 88999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCc
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTS 1031 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1109)
|+....+. ......++|..|+|||++.+. .|+...||||+||++.||++++.-|.+..+ .+.....++-...+.
T Consensus 167 Ara~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se----~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 167 ARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE----IDQLFRIFRLLGTPN 241 (323)
T ss_pred HHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHcCCCC
Confidence 99665332 234566789999999999987 689999999999999999999999987554 222222222221111
Q ss_pred hhhhhhc------c-----hh-hccc----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1032 ELFDKRL------D-----LS-AKRT----VEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1032 ~~~~~~~------~-----~~-~~~~----~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
+...+.. . .. .... ........+++.+|++.+|.+|.|++.+++|-
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~ 303 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHP 303 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcCh
Confidence 1110000 0 00 0000 01113578999999999999999999999883
No 71
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6e-36 Score=346.38 Aligned_cols=263 Identities=21% Similarity=0.192 Sum_probs=201.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.+|++.++||+|+||.||+|++. +++.||+|+.. ...+.+|++++++++||||+++++++......++|+|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 57999999999999999999864 68899999653 2346789999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
++. ++|..++..... +++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|+......
T Consensus 164 ~~~-~~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 164 RYK-TDLYCYLAAKRN---IAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred cCC-CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 995 689888866543 889999999999999999999 7799999999999999999999999999997543222
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCccc---CCcHHHHHHHhhhccCCCc-h----
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLEL---GGDLVTWVRRSIHEMVPTS-E---- 1032 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~---~~~~~~~~~~~~~~~~~~~-~---- 1032 (1109)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+....+........+.. +
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 2333456799999999999999999999999999999999999988653221 0011111111111100000 0
Q ss_pred ---hhhhhc-------------chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1033 ---LFDKRL-------------DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1033 ---~~~~~~-------------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
..+... .............+.+++.+|++.||++|||+.|++++-+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f 379 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAF 379 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhh
Confidence 000000 00000011234468899999999999999999999988765
No 72
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.8e-36 Score=337.97 Aligned_cols=243 Identities=24% Similarity=0.285 Sum_probs=197.1
Q ss_pred EecCCcceEEEEEec-CCcEEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 810 IGRGACGTVYKATLA-NGEVIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
||+|+||+||+|+.. +++.||+|+++... ........+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999875 58899999987432 1223456788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcccc
Q 001274 888 GEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAI 967 (1109)
Q Consensus 888 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 967 (1109)
.+++..... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..... .......
T Consensus 81 ~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~ 153 (312)
T cd05585 81 FHHLQREGR---FDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTF 153 (312)
T ss_pred HHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCccccc
Confidence 999976543 899999999999999999999 789999999999999999999999999999754321 2223446
Q ss_pred ccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHH
Q 001274 968 AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVE 1047 (1109)
Q Consensus 968 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
.||+.|+|||++.+..++.++||||+||++|||++|+.||.+.. ..+..+.......... ..
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~----~~~~~~~~~~~~~~~~--------------~~ 215 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN----VNEMYRKILQEPLRFP--------------DG 215 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC----HHHHHHHHHcCCCCCC--------------Cc
Confidence 79999999999999999999999999999999999999997532 2233333222221111 11
Q ss_pred HHHHHHHHHHhccCCCCCCCCC---HHHHHHHH
Q 001274 1048 EMTLFLKIALFCSSTSPLNRPT---MREVIAMM 1077 (1109)
Q Consensus 1048 ~~~~~~~li~~cl~~dP~~RPt---~~evl~~L 1077 (1109)
....+.+++.+||+.||++||+ +.|++.+-
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp 248 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHP 248 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCC
Confidence 1235678999999999999974 67777663
No 73
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=350.93 Aligned_cols=260 Identities=24% Similarity=0.317 Sum_probs=208.3
Q ss_pred cCCCCCceEecCCcceEEEEEecCC-cEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEE-EEe------C
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANG-EVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGF-CYH------Q 872 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~ 872 (1109)
.++++.+.|.+|||+.||.|++..+ ..||+|++... +....+.+.+|+++|+.|+ |+|||.+++. ... .
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 4677889999999999999997765 99999999755 4456788999999999996 9999999993 221 1
Q ss_pred CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
-+.++.||||+||.|-+++.++...+ |++.++++|+.++++|+++||.. ..+|||||||.+|||+..++..||||||.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 25679999999999999998766544 99999999999999999999965 77899999999999999999999999999
Q ss_pred cccccCCCCCCc--------cccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHH
Q 001274 953 AKLIDLPYSKSM--------SAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVR 1021 (1109)
Q Consensus 953 a~~~~~~~~~~~--------~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~ 1021 (1109)
|...-....... -....|+.|+|||++. +.+.++|+|||++||+||-|+....||+....-
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-------- 264 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-------- 264 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--------
Confidence 874432221111 1124789999999864 677999999999999999999999999864210
Q ss_pred HhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccC
Q 001274 1022 RSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVS 1085 (1109)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 1085 (1109)
.++...+... ........+..+|..||+.+|.+||++.+|++.+.++.....
T Consensus 265 ----------aIlng~Y~~P--~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 265 ----------AILNGNYSFP--PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred ----------eEEeccccCC--CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 1111111111 123445678899999999999999999999999998876643
No 74
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=8.4e-36 Score=345.20 Aligned_cols=262 Identities=23% Similarity=0.358 Sum_probs=206.6
Q ss_pred hcCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCC
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQD 873 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 873 (1109)
.++|+++++||+|+||.||+|++. .+..||||+++... .....+.+.+|++++++++ ||||+++++++...+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 468899999999999999999753 13479999996432 2334567899999999996 999999999999999
Q ss_pred ceEEEEEeccCCCHHHHhccCCC---------------------------------------------------------
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQ--------------------------------------------------------- 896 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 896 (1109)
..++||||+++|+|.+++.....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999999865321
Q ss_pred ------------------------------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC
Q 001274 897 ------------------------------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD 940 (1109)
Q Consensus 897 ------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~ 940 (1109)
...+++..+..++.||++|++||| +.+|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEe
Confidence 113778888999999999999999 78999999999999999
Q ss_pred CCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHH
Q 001274 941 EEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVT 1018 (1109)
Q Consensus 941 ~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~ 1018 (1109)
.++.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||...........
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~ 351 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN 351 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH
Confidence 999999999999986542211 11223456788999999999999999999999999999997 9999875432222222
Q ss_pred HHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1019 WVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
.+.. ..... ........+.+++.+||+.+|++||++.++.++|++..+
T Consensus 352 ~~~~----~~~~~------------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 352 KIKS----GYRMA------------KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHhc----CCCCC------------CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 2221 11000 011123457899999999999999999999999987654
No 75
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3e-36 Score=341.72 Aligned_cols=245 Identities=21% Similarity=0.258 Sum_probs=198.3
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
+.||+|+||.||+|+.. +|+.||+|+++.... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999865 689999999975422 2233456778999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcc
Q 001274 886 SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMS 965 (1109)
Q Consensus 886 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 965 (1109)
+|..++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.... ......
T Consensus 81 ~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~-~~~~~~ 153 (323)
T cd05595 81 ELFFHLSRERV---FTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-DGATMK 153 (323)
T ss_pred cHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccC-CCCccc
Confidence 99998876543 899999999999999999999 78999999999999999999999999999875321 122234
Q ss_pred ccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhccc
Q 001274 966 AIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRT 1045 (1109)
Q Consensus 966 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...............
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~----~~~~~~~~~~~~~~p-------------- 215 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----ERLFELILMEEIRFP-------------- 215 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCCCC--------------
Confidence 46789999999999999999999999999999999999999975321 222222211111110
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 001274 1046 VEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMM 1077 (1109)
Q Consensus 1046 ~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L 1077 (1109)
......+.+++.+||+.||++|| ++.+++++-
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence 11123567999999999999998 899998764
No 76
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.8e-36 Score=334.32 Aligned_cols=265 Identities=23% Similarity=0.364 Sum_probs=199.0
Q ss_pred cCCCCCceEecCCcceEEEEEec--CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC---CCCceeeEEEEEEe-----
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA--NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI---RHRNIVKLYGFCYH----- 871 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 871 (1109)
++|++.+.||+|+||+||+|++. +++.||+|+++...........+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 37889999999999999999863 468899999876544333345566777777665 69999999999863
Q ss_pred CCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 872 QDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 872 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
....++||||++ ++|.+++...... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 345789999996 6999998764432 3889999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCc
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTS 1031 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1109)
+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+.+...+.. .. .+..
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~-~~--~~~~ 230 (290)
T cd07862 156 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV-IG--LPGE 230 (290)
T ss_pred ceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHH-hC--CCCh
Confidence 99865422 2334557899999999999889999999999999999999999999864322222222111 10 0011
Q ss_pred hhhhhhc-------chhh-----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1032 ELFDKRL-------DLSA-----KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1032 ~~~~~~~-------~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
+.+.... .... .........+.+++.+|++.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 1110000 0000 0011123456799999999999999999999875
No 77
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.7e-36 Score=340.25 Aligned_cols=271 Identities=23% Similarity=0.374 Sum_probs=206.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.++||+|+||.||+|++. +++.||+|.+.... .......+.+|++++++++|+||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 68999999999999999999876 68889999886432 22345678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++|+|.+++...+. +++..+..++.+++.|+.|||+. .+++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-- 156 (333)
T cd06650 84 HMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 156 (333)
T ss_pred cCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh--
Confidence 9999999999976543 78899999999999999999932 3799999999999999999999999999975532
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCc---------
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTS--------- 1031 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------- 1031 (1109)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||...... .....+...........
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 157 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK-ELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred -hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh-HHHHHhcCcccCCccccccCcccCCc
Confidence 1223456899999999999989999999999999999999999999753311 11111100000000000
Q ss_pred ------------------hhhhhhcchhh-c-ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1032 ------------------ELFDKRLDLSA-K-RTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1032 ------------------~~~~~~~~~~~-~-~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
...+....... . .......++.+++.+||+.||++|||+.|++++-+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 00000000000 0 000112457899999999999999999999988766543
No 78
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.5e-36 Score=341.41 Aligned_cols=268 Identities=25% Similarity=0.349 Sum_probs=200.6
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----ceE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-----SNL 876 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 876 (1109)
+|++.++||+|+||.||+|+.. +++.||||++............+.+|++++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5788899999999999999865 6899999998754333334567889999999999999999999886433 469
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+||||+. ++|.+++..... +++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKANDD---LTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 689998876543 899999999999999999999 779999999999999999999999999999854
Q ss_pred cCCCC--CCccccccccceeccccccC--CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCch
Q 001274 957 DLPYS--KSMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSE 1032 (1109)
Q Consensus 957 ~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1109)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..... ....+...... +...
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~-~~~~~~~~~~~--~~~~ 230 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH-QLDLITDLLGT--PSPE 230 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCC--CCHH
Confidence 32111 12234578999999999875 678999999999999999999999997533111 11111111000 0110
Q ss_pred hhhhh-----------cchh-----hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1033 LFDKR-----------LDLS-----AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1033 ~~~~~-----------~~~~-----~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..... +... ..........+.+++.+||+.||++|||++|++++-+..
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~ 294 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFK 294 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhh
Confidence 00000 0000 000001124567999999999999999999999986543
No 79
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=7.2e-36 Score=328.57 Aligned_cols=254 Identities=25% Similarity=0.404 Sum_probs=205.6
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++|++.++||+|+||.||+|...+++.||+|.+... ....+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG---TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC---chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 578899999999999999999888889999988632 22456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.++++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 83 MAKGSLLDFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 999999999976432 23788999999999999999999 77999999999999999999999999999987643222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||++.+..++.++||||+||++|||+| |+.||...... .....+.. ......
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-~~~~~~~~----~~~~~~-------- 225 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-DVMSALQR----GYRMPR-------- 225 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-HHHHHHHc----CCCCCC--------
Confidence 22233446778999999998899999999999999999998 99999753211 11111111 111000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......+.+++.+|+..+|++||+++++.+.|++
T Consensus 226 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 226 ----MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00112357789999999999999999999999875
No 80
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5e-36 Score=341.40 Aligned_cols=249 Identities=23% Similarity=0.287 Sum_probs=203.2
Q ss_pred cCCCCCceEecCCcceEEEEEecC--CcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN--GEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
++|++.+.||+|+||.||+|++++ +..||+|++..... .....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 578899999999999999998543 36899999864322 223446788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+++|+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNKR---FPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999976553 899999999999999999999 78999999999999999999999999999986542
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .................
T Consensus 184 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~i~~~~~~~p~~----- 250 (340)
T PTZ00426 184 ----RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP----LLIYQKILEGIIYFPKF----- 250 (340)
T ss_pred ----CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH----HHHHHHHhcCCCCCCCC-----
Confidence 22345799999999999998999999999999999999999999975321 11122222211111110
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMI 1078 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~ 1078 (1109)
....+.+++.+|++.||++|+ ++++++++-+
T Consensus 251 ---------~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~ 286 (340)
T PTZ00426 251 ---------LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286 (340)
T ss_pred ---------CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence 112467899999999999995 8999998854
No 81
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1e-35 Score=338.08 Aligned_cols=246 Identities=22% Similarity=0.264 Sum_probs=199.5
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
+.||+|+||.||+|+.. +++.||+|++..... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 689999999974422 2234467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcc
Q 001274 886 SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMS 965 (1109)
Q Consensus 886 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 965 (1109)
+|..++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.... ......
T Consensus 81 ~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~-~~~~~~ 153 (328)
T cd05593 81 ELFFHLSRERV---FSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT-DAATMK 153 (328)
T ss_pred CHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCC-cccccc
Confidence 99998876543 899999999999999999999 78999999999999999999999999999875431 122234
Q ss_pred ccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhccc
Q 001274 966 AIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRT 1045 (1109)
Q Consensus 966 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... ................
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~----~~~~~~~~~~~~~~~p-------------- 215 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----HEKLFELILMEDIKFP-------------- 215 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC----HHHHHHHhccCCccCC--------------
Confidence 4679999999999999999999999999999999999999997532 2222222221111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHH
Q 001274 1046 VEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMI 1078 (1109)
Q Consensus 1046 ~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~ 1078 (1109)
......+.+++.+|++.||++|| ++.|++++-+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 253 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCC
Confidence 01123567899999999999997 8999998743
No 82
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=9e-36 Score=326.62 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=202.7
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++|++.+.||+|+||+||+|+++++..||+|.++... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc---ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 4678889999999999999998777789999886332 2346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++|+|.+++..... .+++..+..++.||+.|++||| +.+++|+||||+||+++.++.+||+|||.++....+..
T Consensus 81 ~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 81 MSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 999999999976543 3899999999999999999999 78999999999999999999999999999886543222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+..........+..
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~----~~~~~~~~~~~~~~~--------- 222 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN----SETVEKVSQGLRLYR--------- 222 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH----HHHHHHHhcCCCCCC---------
Confidence 22223345678999999998889999999999999999999 9999875431 111111111111000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.......+.+++.+||+.+|++||++.++++.+
T Consensus 223 ----~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 223 ----PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred ----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 001124678999999999999999999999876
No 83
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.4e-35 Score=340.97 Aligned_cols=255 Identities=27% Similarity=0.402 Sum_probs=198.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.+|+..++||+|+||+||+|++. +++.||||++.... .....+.+.+|+++++.++|+||+++++++...+..++|||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 35667789999999999999865 68999999986432 22335678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++|+|.... ...+..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 153 ~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 153 FMDGGSLEGTH-------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred cCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99999986532 2566778899999999999999 7899999999999999999999999999998664221
Q ss_pred CCCccccccccceeccccccC-----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||.... ..+.............+.
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~----- 295 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR-QGDWASLMCAICMSQPPE----- 295 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC-CccHHHHHHHHhccCCCC-----
Confidence 12234578999999998743 234568999999999999999999997322 222222222211111100
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
........+.+++.+||+.||++||++.|++++-+-...
T Consensus 296 --------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 296 --------APATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred --------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 011122457899999999999999999999998665543
No 84
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-35 Score=326.49 Aligned_cols=255 Identities=27% Similarity=0.412 Sum_probs=206.1
Q ss_pred hcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.++|++.+.||+|+||.||+|.+.+++.||+|.++... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT---MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc---ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 35788899999999999999998778899999986432 235678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++.... ...+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||+++......
T Consensus 82 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 82 LMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred cccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 999999999997654 224899999999999999999999 7899999999999999999999999999998765222
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.........+..|+|||++.+..++.++||||||+++|||++ |+.||.+... ....... .......
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~~~-~~~~~~~-------- 224 (261)
T cd05068 158 YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN----AEVLQQV-DQGYRMP-------- 224 (261)
T ss_pred ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH----HHHHHHH-HcCCCCC--------
Confidence 222222334568999999999999999999999999999999 9999875331 1111111 1111000
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
........+.+++.+|++.+|++||++.++++.|+.
T Consensus 225 ----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 225 ----CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ----CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 011122467899999999999999999999999875
No 85
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.2e-36 Score=347.85 Aligned_cols=254 Identities=26% Similarity=0.318 Sum_probs=205.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|.+.+.||+|+||+||+|+.. +++.||||+++..... ......+.+|++++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999975 6899999999754221 234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 9999999999998763 3899999999999999999999 789999999999999999999999999999866432
Q ss_pred C----------------------------CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcc
Q 001274 960 Y----------------------------SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLE 1011 (1109)
Q Consensus 960 ~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~ 1011 (1109)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 112234568999999999999999999999999999999999999997543
Q ss_pred cCCcHHHHHHHhhh--ccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHHH
Q 001274 1012 LGGDLVTWVRRSIH--EMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPT-MREVIAMMI 1078 (1109)
Q Consensus 1012 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt-~~evl~~L~ 1078 (1109)
. ......... ....... .......+.+++.+|+. ||++||+ +++++++.+
T Consensus 235 ~----~~~~~~i~~~~~~~~~p~------------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 235 L----QETYNKIINWKESLRFPP------------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred H----HHHHHHHhccCCcccCCC------------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 1 111111111 1100000 00023457789999997 9999999 999998854
No 86
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-35 Score=345.11 Aligned_cols=257 Identities=22% Similarity=0.282 Sum_probs=198.6
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.|+..+.||+|+||+||+|++. +++.||||++..... .......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999864 688999999975432 22344678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++|+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRMEV---FPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 9999999999976543 889999999999999999999 7899999999999999999999999999976431100
Q ss_pred C----------------------------------------------CCccccccccceeccccccCCCCCccchhHHHH
Q 001274 961 S----------------------------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFG 994 (1109)
Q Consensus 961 ~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 994 (1109)
. ......+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 001235799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHh--ccCCCCCCCCCHHH
Q 001274 995 VVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALF--CSSTSPLNRPTMRE 1072 (1109)
Q Consensus 995 vll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~--cl~~dP~~RPt~~e 1072 (1109)
|++|||++|+.||............+. ....... .. .......+.+++.+ |+..+|..||++.|
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~----~~--------~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVIN--WENTLHI----PP--------QVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHc--cccccCC----CC--------CCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 999999999999975432111111110 0000000 00 00111245567766 56667777999999
Q ss_pred HHHHHHH
Q 001274 1073 VIAMMID 1079 (1109)
Q Consensus 1073 vl~~L~~ 1079 (1109)
++++-+.
T Consensus 302 ~l~hp~f 308 (381)
T cd05626 302 IKAHPFF 308 (381)
T ss_pred HhcCccc
Confidence 9988543
No 87
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=303.27 Aligned_cols=258 Identities=24% Similarity=0.356 Sum_probs=207.2
Q ss_pred hcCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcch------hHHHHHHHHHhccC-CCCceeeEEEEEEeC
Q 001274 801 TGNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATA------DNSFLAEISTLGKI-RHRNIVKLYGFCYHQ 872 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 872 (1109)
...|...+.+|.|..++|-++.+ ++|.++|+|++......... .++-.+|+.|++++ .||+|+.+.++++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 34677778899999999998865 47889999999755332211 24556799999998 799999999999999
Q ss_pred CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
...++|+|.|+.|.|.+|+...- +++++..++|+.|+.+|++||| ...||||||||+|||++++.++||+|||+
T Consensus 96 sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccce
Confidence 99999999999999999997654 3999999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccC------CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYT------MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
|+.+. ........+||++|.|||.+.. ..|+..+|+|+.||++|-++.|..||.....--. ++....+
T Consensus 170 a~~l~--~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlM----LR~ImeG 243 (411)
T KOG0599|consen 170 ACQLE--PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLM----LRMIMEG 243 (411)
T ss_pred eeccC--CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHH----HHHHHhc
Confidence 99876 4556678899999999998763 3588899999999999999999999975321111 1111111
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
... .....=.+......++|.+|++.||++|-|++|+++|-+..
T Consensus 244 kyq----------F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 244 KYQ----------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred ccc----------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 111 11111122234567999999999999999999999997764
No 88
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-35 Score=335.26 Aligned_cols=246 Identities=23% Similarity=0.277 Sum_probs=198.2
Q ss_pred ceEecCCcceEEEEEe----cCCcEEEEEEeeccCC--CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 808 AVIGRGACGTVYKATL----ANGEVIAVKKIKLRGE--GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++||+|+||.||+++. .+++.||||+++.... .......+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 3578999999974321 122335677899999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++|+|.+++..... +.+..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 154 (323)
T cd05584 82 LSGGELFMHLEREGI---FMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE-G 154 (323)
T ss_pred CCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-C
Confidence 999999999976543 788899999999999999999 789999999999999999999999999998754321 2
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .................
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~----~~~~~~~~~~~~~~~~~--------- 221 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN----RKKTIDKILKGKLNLPP--------- 221 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC----HHHHHHHHHcCCCCCCC---------
Confidence 22234578999999999999899999999999999999999999997532 22222222222211111
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMI 1078 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~ 1078 (1109)
.....+.+++.+|++.||++|| ++.+++++-+
T Consensus 222 -----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~ 258 (323)
T cd05584 222 -----YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPF 258 (323)
T ss_pred -----CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCC
Confidence 1123567999999999999999 8999988643
No 89
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.6e-36 Score=343.80 Aligned_cols=260 Identities=22% Similarity=0.265 Sum_probs=202.6
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ........+.+|+.+++.++||||+++++++..++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3468999999999999999999975 58899999986432 122234567899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||+++|+|.+++.... +++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|....
T Consensus 121 v~Ey~~gg~L~~~l~~~~----~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNYD----VPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999996542 788999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCCCccccccccceeccccccCCC----CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMK----VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
...........||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ...............
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~----~~~~~~i~~~~~~~~-- 267 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL----VGTYSKIMDHKNSLN-- 267 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCcccC--
Confidence 33222234567999999999987643 78899999999999999999999975332 222222111110000
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHHHHh
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLN--RPTMREVIAMMIDA 1080 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPt~~evl~~L~~~ 1080 (1109)
+. ........+.+++.+|+..+|.+ ||++.|++++-+..
T Consensus 268 ~p--------~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~ 308 (370)
T cd05621 268 FP--------EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFK 308 (370)
T ss_pred CC--------CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccC
Confidence 00 01111234667888888755544 89999999986543
No 90
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.4e-35 Score=337.85 Aligned_cols=261 Identities=27% Similarity=0.430 Sum_probs=204.7
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC-C
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ-D 873 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 873 (1109)
++|++.+.||+|+||.||+|+.. +++.||+|+++... .....+.+.+|+++++++ +|+||++++++|... .
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 57889999999999999999642 35789999986432 223446688899999999 899999999988754 4
Q ss_pred ceEEEEEeccCCCHHHHhccCCC---------------------------------------------------------
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQ--------------------------------------------------------- 896 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 896 (1109)
..+++|||+++++|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 57899999999999999864321
Q ss_pred -CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC-CCcccccccccee
Q 001274 897 -TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYI 974 (1109)
Q Consensus 897 -~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~ 974 (1109)
...+++..+..++.||+.|++||| +.+|+||||||+||+++.++.++|+|||+++....... .......++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 124789999999999999999999 77999999999999999999999999999986542211 1122345677899
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHH
Q 001274 975 APEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFL 1053 (1109)
Q Consensus 975 aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1109)
|||++.+..++.++||||+||++|||++ |..||.+....+.....+........ .......+.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~ 306 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA----------------PEYATPEIY 306 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC----------------CccCCHHHH
Confidence 9999999999999999999999999998 99999764332222222221111000 011124578
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1054 KIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1054 ~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
+++.+||+.+|++||++.|++++|+++.+
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998875
No 91
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.1e-35 Score=329.06 Aligned_cols=258 Identities=26% Similarity=0.283 Sum_probs=204.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.|++.++||+|+||+||++... +++.||+|++...... ......+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3778899999999999999864 6899999998643221 2223557789999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++|+|.+++..... ..+++..+..++.|++.|+.||| +.+++||||||+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~-- 154 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE-- 154 (285)
T ss_pred ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC--
Confidence 9999999988865432 23899999999999999999999 77999999999999999999999999999986532
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
........|+..|+|||++.+..++.++||||+||++|||++|+.||.+....... +.+......... .
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~---~------- 223 (285)
T cd05605 155 GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVKEDQE---E------- 223 (285)
T ss_pred CCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhhhccc---c-------
Confidence 12223457899999999999999999999999999999999999999854321111 111111111100 0
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHHHh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMIDA 1080 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~~~ 1080 (1109)
........+.+++.+||+.||++|| ++++++++-+..
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~ 265 (285)
T cd05605 224 ---YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265 (285)
T ss_pred ---cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCcc
Confidence 0111233577999999999999999 899998875544
No 92
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=9e-36 Score=335.93 Aligned_cols=267 Identities=26% Similarity=0.353 Sum_probs=207.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-C-----CceeeEEEEEEeCCc
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-H-----RNIVKLYGFCYHQDS 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~ 874 (1109)
.+|.+.+.||+|+||.|-+|.+. +++.||||+++.. ..-..+-..|+.++..++ | -|+|+++++|...++
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 38899999999999999999854 6999999999833 223455667899999986 4 389999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC--CceEEeeccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE--FQAHVGDFGL 952 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DFG~ 952 (1109)
.|||+|.+. -+|+++++.++.. .++...++.|+.||+.||.+|| +.+|||+||||+|||+... ..+||+|||.
T Consensus 263 lciVfELL~-~NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 263 LCIVFELLS-TNLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeeehhhh-hhHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccc
Confidence 999999995 5999999987654 4999999999999999999999 8899999999999999644 3799999999
Q ss_pred cccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCch
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSE 1032 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1109)
|+... .....+.-+..|+|||++.|.+|+.+.||||||||+.||++|.+.|.+..+.+.+...+. .+ + .|...
T Consensus 338 Sc~~~----q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e-~l-G-~Pp~~ 410 (586)
T KOG0667|consen 338 SCFES----QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIE-VL-G-LPPPK 410 (586)
T ss_pred ccccC----CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHH-Hh-C-CCCHH
Confidence 98754 223367788899999999999999999999999999999999888876442222211111 00 0 11111
Q ss_pred hhh----------h-----------------------------hcc---h------hhcccHHHHHHHHHHHHhccCCCC
Q 001274 1033 LFD----------K-----------------------------RLD---L------SAKRTVEEMTLFLKIALFCSSTSP 1064 (1109)
Q Consensus 1033 ~~~----------~-----------------------------~~~---~------~~~~~~~~~~~~~~li~~cl~~dP 1064 (1109)
+++ . ... . .......+...|.+++.+|+.+||
T Consensus 411 mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP 490 (586)
T KOG0667|consen 411 MLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDP 490 (586)
T ss_pred HHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCc
Confidence 111 0 000 0 000111344669999999999999
Q ss_pred CCCCCHHHHHHHHHHhhhc
Q 001274 1065 LNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1065 ~~RPt~~evl~~L~~~~~~ 1083 (1109)
.+|+|+.++++|-+--...
T Consensus 491 ~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 491 AERITPAQALNHPFLTGTS 509 (586)
T ss_pred hhcCCHHHHhcCccccccc
Confidence 9999999999997665333
No 93
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.4e-35 Score=323.53 Aligned_cols=255 Identities=24% Similarity=0.370 Sum_probs=205.0
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.+|.+.++||+|+||.||+|.++ .++.||+|++... ......+.+|++++++++|+||+++++++...+..++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 45778899999999999999865 5889999988632 2345678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... ..+++..+..++.|+++|++||| +.+++||||||+||++++++.+||+|||.++......
T Consensus 83 ~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 83 FMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred eCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 9999999999976432 23899999999999999999999 7799999999999999999999999999998765322
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
........++..|+|||++.+..++.++|||||||++|||++ |..||.+.. ..+........ ....
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~----~~~~~~~~~~~-~~~~-------- 225 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELLEKG-YRME-------- 225 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHHHCC-CCCC--------
Confidence 222222334678999999999999999999999999999998 999987532 22222221111 1000
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
........+.+++.+||+.+|++||++.+++++|+.+
T Consensus 226 ----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 ----RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0111224678999999999999999999999999764
No 94
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.9e-35 Score=332.13 Aligned_cols=259 Identities=24% Similarity=0.411 Sum_probs=203.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCc----EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGE----VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
.+|+..+.||+|+||+||+|++. +++ .||+|+++.. ......+++.+|+.+++.++||||++++|+|... ..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 46899999999999999999854 333 4899998633 2233456788999999999999999999998764 578
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+|+||+++|+|.+++...... +++..+.+++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~l~~~l~~~~~~--~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 85 LITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeeecCCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccc
Confidence 999999999999999875543 889999999999999999999 779999999999999999999999999999876
Q ss_pred cCCCCCC-ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 957 DLPYSKS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 957 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
....... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.+... .......... ...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-~~~~~~~~~~--~~~~~~--- 233 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSILEKG--ERLPQP--- 233 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHhCC--CCCCCC---
Confidence 4322211 122335678999999999999999999999999999998 9999875321 1111111110 000100
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
......+.+++.+||+.+|++||++.+++..+..+....
T Consensus 234 -----------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 234 -----------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred -----------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 011234678999999999999999999999998886554
No 95
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.9e-36 Score=343.64 Aligned_cols=257 Identities=22% Similarity=0.246 Sum_probs=203.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|.+.+.||+|+||+||+|+.. +++.||+|+++.... .....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888999999999999999865 689999999975432 2234566889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 99999999999987633 3899999999999999999999 789999999999999999999999999999876533
Q ss_pred CCCCccccccccceecccccc------CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 960 YSKSMSAIAGSYGYIAPEYAY------TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
.........||+.|+|||++. +..++.++||||+||++|||++|+.||..... ............ ...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~----~~~~~~i~~~~~-~~~- 229 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS----AKTYNNIMNFQR-FLK- 229 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH----HHHHHHHHcCCC-ccC-
Confidence 222223456899999999986 45678999999999999999999999975331 122221111100 000
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
+. ........+.+++.+|++ +|++||++++++++-+
T Consensus 230 ~~--------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 230 FP--------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred CC--------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 00 001122356789999998 9999999999998744
No 96
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-35 Score=337.48 Aligned_cols=248 Identities=26% Similarity=0.335 Sum_probs=196.6
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHh---ccCCCCceeeEEEEEEeCCceEEE
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTL---GKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
|++.+.||+|+||.||+|++. +++.||||+++.... .....+.+.+|++++ +.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999865 689999999974421 122334566666554 567899999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+++|+|..++... .+++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999888643 2899999999999999999999 78999999999999999999999999999875431
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.........|++.|+|||++.+..++.++||||+||++|||++|+.||.+.. ..+............
T Consensus 154 -~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~----~~~~~~~i~~~~~~~-------- 220 (324)
T cd05589 154 -FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD----EEEVFDSIVNDEVRY-------- 220 (324)
T ss_pred -CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCCC--------
Confidence 1222345679999999999999999999999999999999999999997532 222222221111110
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMM 1077 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L 1077 (1109)
.......+.+++.+|++.||.+|| ++.+++++-
T Consensus 221 ------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 221 ------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred ------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 011123467899999999999999 688887764
No 97
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=334.29 Aligned_cols=249 Identities=26% Similarity=0.381 Sum_probs=202.8
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGS 886 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 886 (1109)
-+||+|.||+||-|++. +...+|||.+..+... ..+....|+...++++|+|||+++|.+..+++.-|.||-++||+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr--~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR--EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccch--hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 37999999999999976 4667999999765433 45568899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC-CCCceEEeeccccccccCCCCCCcc
Q 001274 887 LGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD-EEFQAHVGDFGLAKLIDLPYSKSMS 965 (1109)
Q Consensus 887 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG~a~~~~~~~~~~~~ 965 (1109)
|.+.++..=+.-.-.+.++-...+||++||.||| +..|||||||-+||||+ -.|.+||+|||-+++.. .......
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-ginP~TE 734 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-GINPCTE 734 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhc-cCCcccc
Confidence 9999986544322377788889999999999999 77999999999999995 68999999999998775 3455667
Q ss_pred ccccccceeccccccCCC--CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhc
Q 001274 966 AIAGSYGYIAPEYAYTMK--VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAK 1043 (1109)
Q Consensus 966 ~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1109)
++.||..|||||++..++ |+.++|||||||++.||.||++||-.....+. ...+-. + ....+.
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--AMFkVG---m----------yKvHP~ 799 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--AMFKVG---M----------YKVHPP 799 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--hhhhhc---c----------eecCCC
Confidence 889999999999998664 89999999999999999999999976542211 111100 0 111222
Q ss_pred ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1044 RTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1044 ~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.+.+...+...+|.+|+.+||.+||+|.++++.-
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDP 833 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence 3445556788999999999999999999998653
No 98
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.1e-35 Score=337.24 Aligned_cols=270 Identities=24% Similarity=0.269 Sum_probs=202.5
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD----- 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 873 (1109)
..++|++.+.||+|+||.||+|++. +++.||||++............+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3478999999999999999999865 6899999999755444445667889999999999999999999986543
Q ss_pred -ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 874 -SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 874 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 46899999965 66666643 2788899999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHH----------
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRR---------- 1022 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~---------- 1022 (1109)
++.... ........+|+.|+|||++.+..++.++||||+||++|||++|+.||.+.............
T Consensus 170 a~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 170 ARTACT--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred cccccc--CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 975432 22234457899999999999999999999999999999999999999854321111111000
Q ss_pred --------hhhccC-----CCchhhhhhcc-hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1023 --------SIHEMV-----PTSELFDKRLD-LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1023 --------~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
...... ...+.+..... ............+.+++.+|++.||++|||+.|++++-+-.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 319 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence 000000 00000000000 00000111234578999999999999999999999987654
No 99
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=350.25 Aligned_cols=257 Identities=26% Similarity=0.352 Sum_probs=206.9
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD----- 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 873 (1109)
..++|.+.+.||+|+||+||+|+.. +++.||||++............+.+|+..+..++|+||+++.+.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3468999999999999999999854 7899999999766555555667889999999999999999988775433
Q ss_pred ---ceEEEEEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 001274 874 ---SNLLLYEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGD 949 (1109)
Q Consensus 874 ---~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 949 (1109)
..++||||+++|+|.+++.... ....+++..+..++.|++.||+|+| +.+|+||||||+||+++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEe
Confidence 2579999999999999986532 2234899999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC
Q 001274 950 FGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV 1028 (1109)
Q Consensus 950 FG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 1028 (1109)
||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.+........
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~----~~~~~~~~~~~~~~ 262 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE----NMEEVMHKTLAGRY 262 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC----CHHHHHHHHhcCCC
Confidence 999986542221 2234567999999999999999999999999999999999999999743 23333333222221
Q ss_pred CCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1029 PTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.. . .......+.+++.+||+.||++||++.+++++
T Consensus 263 ~~---~----------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 263 DP---L----------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CC---C----------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 10 0 11122457799999999999999999999876
No 100
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.1e-36 Score=315.95 Aligned_cols=258 Identities=22% Similarity=0.241 Sum_probs=210.9
Q ss_pred cCCCCCceEecCCcceEEEEEecC-CcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN-GEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|+..+.||+|.-|+||+++..+ +..+|+|++...... .....+...|.+|++.++||.++.+|+.++.++..|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 467778899999999999999764 589999999654322 334567788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC-
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL- 958 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~- 958 (1109)
|||+||+|....+++..+ .+++..++.++..|+-||+||| ..|||+|||||+||||.++|++-++||.++.....
T Consensus 157 eyCpGGdL~~LrqkQp~~-~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGK-RFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCCCC-ccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999988877655 4999999999999999999999 88999999999999999999999999998743311
Q ss_pred --------------------------------CCC----------------------CCccccccccceeccccccCCCC
Q 001274 959 --------------------------------PYS----------------------KSMSAIAGSYGYIAPEYAYTMKV 984 (1109)
Q Consensus 959 --------------------------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~~~ 984 (1109)
... ......+||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 000 01123469999999999999999
Q ss_pred CccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCC
Q 001274 985 TEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSP 1064 (1109)
Q Consensus 985 ~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP 1064 (1109)
+.++|.|+|||++|||+.|+.||.+....+.+...+.+...- | . ..+....+.++|.+.+..||
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~F--p------------~--~~~vs~~akDLIr~LLvKdP 376 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKF--P------------E--EPEVSSAAKDLIRKLLVKDP 376 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcC--C------------C--CCcchhHHHHHHHHHhccCh
Confidence 999999999999999999999999866555554444321110 0 0 11233467899999999999
Q ss_pred CCCCC----HHHHHHHHHH
Q 001274 1065 LNRPT----MREVIAMMID 1079 (1109)
Q Consensus 1065 ~~RPt----~~evl~~L~~ 1079 (1109)
++|.. |+||.+|-..
T Consensus 377 ~kRlg~~rGA~eIK~HpFF 395 (459)
T KOG0610|consen 377 SKRLGSKRGAAEIKRHPFF 395 (459)
T ss_pred hhhhccccchHHhhcCccc
Confidence 99999 9999988543
No 101
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.3e-35 Score=342.49 Aligned_cols=258 Identities=22% Similarity=0.263 Sum_probs=203.5
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
.++|++.++||+|+||+||+|+.. +++.||+|++..... .......+.+|+.+++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 357889999999999999999865 688999999964321 122345577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+++|+|.+++.... +++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 122 ~Ey~~gg~L~~~l~~~~----l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSNYD----IPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999986542 788889999999999999999 78999999999999999999999999999986643
Q ss_pred CCCCCccccccccceeccccccCC----CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTM----KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
..........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+... ............... +
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----~~~~~~i~~~~~~~~--~ 268 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----VGTYSKIMDHKNSLT--F 268 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH----HHHHHHHHcCCCcCC--C
Confidence 222223456799999999998653 478999999999999999999999985332 222222111110000 0
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHHHH
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLN--RPTMREVIAMMID 1079 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPt~~evl~~L~~ 1079 (1109)
.. .......+.+++.+|++.+|.+ ||++.|++++-+.
T Consensus 269 ~~--------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~ 307 (370)
T cd05596 269 PD--------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFF 307 (370)
T ss_pred CC--------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCccc
Confidence 00 1112245778999999999988 9999999988543
No 102
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.3e-35 Score=322.31 Aligned_cols=251 Identities=26% Similarity=0.396 Sum_probs=201.8
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
.+|++.+.||+|+||.||+|+++++..+|+|++.... .....+.+|++++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA---MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 3578889999999999999998877889999886322 2345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.++.......
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 81 MANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred CCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 999999999976543 3899999999999999999999 77999999999999999999999999999986542222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.. .....
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~----~~~~~--------- 221 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-EVVESVSA----GYRLY--------- 221 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-HHHHHHHc----CCcCC---------
Confidence 11222234568999999999999999999999999999999 89998753321 11111111 11000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
........+.+++.+||..+|++|||+.|+++.|
T Consensus 222 ---~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 ---RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0111234688999999999999999999999876
No 103
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.8e-36 Score=329.13 Aligned_cols=249 Identities=34% Similarity=0.519 Sum_probs=192.0
Q ss_pred CceEecCCcceEEEEEec-----CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 807 GAVIGRGACGTVYKATLA-----NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
.+.||+|.||.||+|.+. .+..|+||.++.. ......+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeecccccccccccccccccccccccccccccccc
Confidence 468999999999999876 3678999999642 3333468899999999999999999999999988889999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC-
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY- 960 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 960 (1109)
+++|+|.+++..... ..+++..+..|+.||++||.||| +.+++|+||+++||+++.++.+||+|||++.......
T Consensus 83 ~~~g~L~~~L~~~~~-~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNK-EPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHTCT-TTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccccc-ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 999999999988721 13899999999999999999999 6799999999999999999999999999998763211
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
............|+|||.+.+..++.++||||||+++|||++ |+.||.... ..++...........
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~----~~~~~~~~~~~~~~~--------- 225 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD----NEEIIEKLKQGQRLP--------- 225 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC----HHHHHHHHHTTEETT---------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccce---------
Confidence 112233457788999999999999999999999999999999 788987542 222222221111100
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
........+.+++.+||+.+|++||+|.++++.|
T Consensus 226 ----~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ----IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0111223577999999999999999999999876
No 104
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.4e-35 Score=325.62 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=198.6
Q ss_pred EecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 810 IGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
||+|+||+||+|.+. +++.||+|++...... ....+.+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 6899999998643221 12235677899999999999999999999999999999999999999
Q ss_pred HHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCccc
Q 001274 888 GEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSA 966 (1109)
Q Consensus 888 ~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 966 (1109)
.+++.... ....+++..+..++.||+.||+||| +.+|+||||||+||+++.++.++|+|||.+...... ......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~-~~~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG-QSKTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC-Cccccc
Confidence 98875422 2234899999999999999999999 789999999999999999999999999999765422 122334
Q ss_pred cccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccH
Q 001274 967 IAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTV 1046 (1109)
Q Consensus 967 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...................... ...
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------------~~~ 222 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVT--------------YPD 222 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCC--------------Ccc
Confidence 578999999999999999999999999999999999999997543222222222211111110 011
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHHH
Q 001274 1047 EEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMID 1079 (1109)
Q Consensus 1047 ~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~~ 1079 (1109)
.....+.+++.+|++.||++|| ++++++++-+.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~ 260 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLF 260 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhh
Confidence 1234577999999999999999 78888887544
No 105
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.8e-35 Score=321.31 Aligned_cols=256 Identities=26% Similarity=0.420 Sum_probs=205.4
Q ss_pred cCCCCCceEecCCcceEEEEEecC----CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN----GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
++|++.+.||+|+||+||+|+++. ...||||+++... .......+.+|+.++++++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 578899999999999999998742 4579999886432 33345678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||+++++|.+++..... .+++..+.+++.|++.|++||| +.+|+||||||+||++++++.++++|||+++...
T Consensus 83 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 83 ITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999999976544 3899999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 958 LPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 958 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
..... ......++..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+. .... ...
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~-~~~~~~~~---~~~~-~~~--- 229 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN-QDVIKAVE---DGYR-LPP--- 229 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH-HHHHHHHH---cCCC-CCC---
Confidence 21111 1122345678999999999999999999999999999998 9999865321 11111111 1110 000
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.......+.+++.+||+.+|++||++.+++++|.++
T Consensus 230 ---------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 230 ---------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111234578999999999999999999999999875
No 106
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.4e-35 Score=328.62 Aligned_cols=257 Identities=27% Similarity=0.445 Sum_probs=204.9
Q ss_pred cCCCCCceEecCCcceEEEEEecC------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
++|++.+.||+|+||.||+|.... ...||+|.++... .......+.+|++++++++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 468888999999999999998642 2579999886432 233456789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCC-------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 001274 876 LLLYEYMENGSLGEQLHGNKQT-------------CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE 942 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~-------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~ 942 (1109)
+++|||+++|+|.+++...... ..+++..+..++.|++.|++||| +.+++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCC
Confidence 9999999999999999754221 24788899999999999999999 7799999999999999999
Q ss_pred CceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHH
Q 001274 943 FQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWV 1020 (1109)
Q Consensus 943 ~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~ 1020 (1109)
+.++|+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||.+... .+....+
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-~~~~~~i 239 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-QEVIEMI 239 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHH
Confidence 9999999999986532221 12233456788999999998899999999999999999998 9999975432 1222222
Q ss_pred HHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1021 RRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.. ...+. ........+.+++.+||+.||.+||+++||+++|..
T Consensus 240 ~~---~~~~~-------------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 240 RS---RQLLP-------------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred Hc---CCcCC-------------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 21 11100 011223568899999999999999999999999864
No 107
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.3e-35 Score=326.68 Aligned_cols=255 Identities=27% Similarity=0.439 Sum_probs=207.3
Q ss_pred hcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
..+|++.++||+|+||+||+|+..+++.||+|++.... ......+.+|+++++.++|+||+++++++...+..++|||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 45788899999999999999998889999999987432 2235678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 83 LMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred ecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 9999999999976543 24899999999999999999999 7799999999999999999999999999998664322
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
. ......++..|+|||++.+..++.++||||||+++|+|++ |+.||...... .....+. ......
T Consensus 159 ~-~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~~~~---~~~~~~--------- 224 (261)
T cd05148 159 Y-LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYDQIT---AGYRMP--------- 224 (261)
T ss_pred c-cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHHHHH---hCCcCC---------
Confidence 1 1223456778999999998899999999999999999998 89999753311 1111111 111000
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
........+.+++.+||+.||++|||++++++.|+.
T Consensus 225 ----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 225 ----CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred ----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 011222457799999999999999999999999875
No 108
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.8e-35 Score=322.55 Aligned_cols=262 Identities=22% Similarity=0.344 Sum_probs=208.8
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.++||+|+||.||+|+.. +++.||||+++.... .......+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999865 789999998864322 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 880 EYMENGSLGEQLHGNKQ-TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
||+++|+|.+++..... ...+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988854321 224788999999999999999999 78999999999999999999999999999886542
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
. ........++..|+|||++.+..++.++||||+|+++|||++|+.||.... ....++.........+..
T Consensus 159 ~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~------- 228 (267)
T cd08228 159 K-TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK--MNLFSLCQKIEQCDYPPL------- 228 (267)
T ss_pred h-hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc--ccHHHHHHHHhcCCCCCC-------
Confidence 2 112233468889999999998889999999999999999999999986432 122222222111111100
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
........+.+++.+||+.+|++||++.+|++.+.+..
T Consensus 229 -----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 229 -----PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -----ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 01122345789999999999999999999999998753
No 109
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.9e-35 Score=335.92 Aligned_cols=246 Identities=22% Similarity=0.263 Sum_probs=198.2
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
+.||+|+||+||+|+.. +++.||+|+++.... .......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 689999999975422 2233456788999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCC-CCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 886 SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCR-PHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 886 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
+|..++..... +++..+..++.||+.||+||| + .+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~ 153 (325)
T cd05594 81 ELFFHLSRERV---FSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATM 153 (325)
T ss_pred cHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-Cccc
Confidence 99998876543 899999999999999999999 5 69999999999999999999999999998754311 2223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ................
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~----~~~~~~~i~~~~~~~p------------- 216 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----HEKLFELILMEEIRFP------------- 216 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC----HHHHHHHHhcCCCCCC-------------
Confidence 44579999999999999999999999999999999999999997532 2222222211111111
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMI 1078 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~ 1078 (1109)
......+.+++.+|++.||++|+ ++.+++++-+
T Consensus 217 -~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 254 (325)
T cd05594 217 -RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKF 254 (325)
T ss_pred -CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCC
Confidence 01123567899999999999996 9999998743
No 110
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-35 Score=343.50 Aligned_cols=268 Identities=22% Similarity=0.259 Sum_probs=203.2
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----ceE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-----SNL 876 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 876 (1109)
+|+..++||+|+||+||+|++. +++.||||++..........+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999864 7899999998654333344567889999999999999999999998776 789
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+||||+. ++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 58888876544 3899999999999999999999 789999999999999999999999999999865
Q ss_pred cCCCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 957 DLPYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
............+++.|+|||++.+. .++.++||||+||++|||++|+.||.+....... ..+..... .. ..+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~~~~g-~~-~~~~~~ 230 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQL-DLITDLLG-TP-SLEAMR 230 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHH-HHHHHHcC-CC-CHHHHH
Confidence 43333333445688999999998874 4799999999999999999999999764321111 11111000 00 000000
Q ss_pred h-----------------hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1036 K-----------------RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1036 ~-----------------~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
. ...............+.+++.+|++.||++|||+.|++++-+-.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 292 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLD 292 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhC
Confidence 0 00000000111234578999999999999999999999986543
No 111
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.4e-35 Score=340.16 Aligned_cols=203 Identities=26% Similarity=0.353 Sum_probs=175.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||+||+|+.. +++.||+|++..... .......+.+|+.++.+++|++|+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888999999999999999865 689999999974321 1223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++...+. +++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKDT---LTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 99999999999976543 899999999999999999999 789999999999999999999999999998754311
Q ss_pred CC----------------------------------CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCC
Q 001274 960 YS----------------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKS 1005 (1109)
Q Consensus 960 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~ 1005 (1109)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 00 00123579999999999999999999999999999999999999
Q ss_pred CCCCc
Q 001274 1006 PVQSL 1010 (1109)
Q Consensus 1006 pf~~~ 1010 (1109)
||.+.
T Consensus 235 Pf~~~ 239 (363)
T cd05628 235 PFCSE 239 (363)
T ss_pred CCCCC
Confidence 99753
No 112
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.3e-35 Score=332.78 Aligned_cols=246 Identities=24% Similarity=0.326 Sum_probs=197.0
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccC-CCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRG-EGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|+.+ +++.||||+++... ......+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 68899999987432 1223445677888888776 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|.+++..... +++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 g~L~~~i~~~~~---l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~-~~~~~ 153 (320)
T cd05590 81 GDLMFHIQKSRR---FDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF-NGKTT 153 (320)
T ss_pred chHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc-CCCcc
Confidence 999999876543 899999999999999999999 78999999999999999999999999999875431 12223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..............
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~----~~~~~~~i~~~~~~~~~------------ 217 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN----EDDLFEAILNDEVVYPT------------ 217 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC----HHHHHHHHhcCCCCCCC------------
Confidence 44578999999999999999999999999999999999999997533 22222222222211111
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTM------REVIAMMI 1078 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~------~evl~~L~ 1078 (1109)
.....+.+++.+|++.||++||++ .+++++-+
T Consensus 218 --~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~ 255 (320)
T cd05590 218 --WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPF 255 (320)
T ss_pred --CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCC
Confidence 112356789999999999999998 77776643
No 113
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.2e-35 Score=343.39 Aligned_cols=256 Identities=24% Similarity=0.296 Sum_probs=201.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||+||+|+.. +++.||||++..... .......+.+|+++++.++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999975 689999999974321 1233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+|||++.++.++|+|||+++.....
T Consensus 81 E~~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKDT---FTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 99999999999976543 899999999999999999999 789999999999999999999999999998754311
Q ss_pred CCC-------------------------------------CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh
Q 001274 960 YSK-------------------------------------SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT 1002 (1109)
Q Consensus 960 ~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt 1002 (1109)
... .....+||+.|+|||++.+..++.++||||+||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 100 0112468999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHHHH
Q 001274 1003 GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPT---MREVIAMMI 1078 (1109)
Q Consensus 1003 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt---~~evl~~L~ 1078 (1109)
|..||..... .+............. +... ......+.+++.+|+. +|.+|++ ++|++++-+
T Consensus 235 G~~Pf~~~~~----~~~~~~i~~~~~~~~--~~~~--------~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~ 298 (364)
T cd05599 235 GYPPFCSDNP----QETYRKIINWKETLQ--FPDE--------VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF 298 (364)
T ss_pred CCCCCCCCCH----HHHHHHHHcCCCccC--CCCC--------CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence 9999975432 122221111110000 0000 0112346688888886 8999998 999988754
No 114
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.4e-35 Score=322.39 Aligned_cols=254 Identities=28% Similarity=0.416 Sum_probs=203.7
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++|++.++||+|+||+||+|+++++..||+|+++... ...+.+.+|++++++++|+||+++++++. .+..++||||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc---cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 5789999999999999999998777789999987432 23457899999999999999999999874 4567999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++|+|.+++..... ..+++..+..++.|+++||+|+| +.+++||||||+||+++.++.++|+|||.++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 82 MSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 999999999976432 23789999999999999999999 78999999999999999999999999999986653332
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||+..+..++.++||||+|+++|||+| |..||...... ........ ..+..
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~----~~~~~~~~-~~~~~--------- 223 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVER-GYRMP--------- 223 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH----HHHHHHhc-CCCCC---------
Confidence 22233456778999999998899999999999999999999 88888653211 11111111 11000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
...+....+.+++.+|++.+|++||+++++++.|+..
T Consensus 224 ---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 224 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ---CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0122334678999999999999999999999998765
No 115
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.6e-35 Score=321.99 Aligned_cols=253 Identities=28% Similarity=0.428 Sum_probs=202.8
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++|++.++||+|+||.||+|..+++..||+|.+..... ..+.+.+|+.++++++|++++++++++. ....++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 47888999999999999999988888999999874322 3457899999999999999999999875 4568999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++..+..++.+++.|++||| +.+++||||||+||++++++.++|+|||.+........
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 82 MSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 999999999976432 23899999999999999999999 77999999999999999999999999999986543222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||+..+..++.++||||||+++|||++ |+.||.+.. ..+......... +..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~----~~~~~~~~~~~~-~~~--------- 223 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN----NREVLEQVERGY-RMP--------- 223 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC----HHHHHHHHHcCC-CCC---------
Confidence 22223345678999999988899999999999999999999 889987532 112222111111 000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
........+.+++.+|++.+|++|||++++.+.|++
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 ---CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 011122458899999999999999999999998864
No 116
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.9e-35 Score=343.12 Aligned_cols=254 Identities=23% Similarity=0.269 Sum_probs=198.4
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.++||+|+||+||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888999999999999999864 789999999864321 2233466888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYDT---FSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99999999999976543 889999999999999999999 789999999999999999999999999999643210
Q ss_pred CCC----------------------------------------------CccccccccceeccccccCCCCCccchhHHH
Q 001274 960 YSK----------------------------------------------SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSF 993 (1109)
Q Consensus 960 ~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 993 (1109)
... .....+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 0012469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCcccCCcHHHHHHHhhh--ccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCC---C
Q 001274 994 GVVLLELITGKSPVQSLELGGDLVTWVRRSIH--EMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNR---P 1068 (1109)
Q Consensus 994 Gvll~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R---P 1068 (1109)
||++|||++|+.||..... .+....... ....... .......+.+++.+|+. +|.+| +
T Consensus 235 Gvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~p~------------~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 235 GAIMFECLIGWPPFCSENS----HETYRKIINWRETLYFPD------------DIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred chhhhhhhcCCCCCCCCCH----HHHHHHHHccCCccCCCC------------CCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 9999999999999975331 111111111 1110000 00112346789999997 66665 6
Q ss_pred CHHHHHHHHH
Q 001274 1069 TMREVIAMMI 1078 (1109)
Q Consensus 1069 t~~evl~~L~ 1078 (1109)
++.|++++-+
T Consensus 298 ~~~~~l~hp~ 307 (377)
T cd05629 298 GAHEIKSHPF 307 (377)
T ss_pred CHHHHhcCCC
Confidence 9999998854
No 117
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.2e-35 Score=333.59 Aligned_cols=244 Identities=24% Similarity=0.311 Sum_probs=192.1
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|+.. +++.||+|+++.... .....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 588999999975321 122334556677776654 899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 g~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~-~~~~ 153 (316)
T cd05592 81 GDLMFHIQSSGR---FDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG-EGKA 153 (316)
T ss_pred CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC-CCcc
Confidence 999999876543 899999999999999999999 789999999999999999999999999999754321 1223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.+... .+............ .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~----~~~~~~i~~~~~~~----~--------- 216 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE----DELFDSILNDRPHF----P--------- 216 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCCC----C---------
Confidence 455789999999999999999999999999999999999999975431 22222211111111 0
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMR-EVIAM 1076 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~-evl~~ 1076 (1109)
......+.+++.+||+.+|++||++. ++.++
T Consensus 217 -~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 217 -RWISKEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred -CCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 11123467899999999999999875 56554
No 118
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2e-35 Score=328.07 Aligned_cols=258 Identities=22% Similarity=0.363 Sum_probs=202.6
Q ss_pred HhcCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 873 (1109)
..++|+..+.||+|+||.||+|++. .++.||||++.... ......++.+|+.+++.++|+||+++++++....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4578999999999999999999753 25679999885332 2234567889999999999999999999999999
Q ss_pred ceEEEEEeccCCCHHHHhccCCC-------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQ-------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAH 946 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 946 (1109)
..++||||+++|+|.+++..... ...+++..+..++.|+++|++||| +.+++||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEE
Confidence 99999999999999999865332 123678889999999999999999 77999999999999999999999
Q ss_pred EeeccccccccCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhh
Q 001274 947 VGDFGLAKLIDLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSI 1024 (1109)
Q Consensus 947 l~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~ 1024 (1109)
++|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+..+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~----~~~~~~~~ 235 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN----EQVLRFVM 235 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHH
Confidence 9999998755322111 1122345778999999999899999999999999999999 7889875321 22222211
Q ss_pred hccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1025 HEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
....+. . .......+.+++.+||+.+|++|||+.|++++++
T Consensus 236 ~~~~~~--~-----------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 236 EGGLLD--K-----------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred cCCcCC--C-----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111110 0 1112235789999999999999999999999875
No 119
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5.2e-35 Score=324.47 Aligned_cols=250 Identities=22% Similarity=0.291 Sum_probs=196.3
Q ss_pred EecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 810 IGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
||+|+||+||+++.+ +|+.||+|++...... ......+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 6899999998643221 12234566799999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcccc
Q 001274 888 GEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAI 967 (1109)
Q Consensus 888 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 967 (1109)
.+++..... ..+++..+..++.||+.|++||| +.+|+||||||+||+++.++.++|+|||++...... ......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~ 154 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQR 154 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeecc
Confidence 988865432 23889999999999999999999 789999999999999999999999999999865421 222345
Q ss_pred ccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHH
Q 001274 968 AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVE 1047 (1109)
Q Consensus 968 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
.|+..|+|||++.+..++.++||||+||++|||++|+.||..........+..+.......+.. ...
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 221 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE-------------HQN 221 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc-------------ccc
Confidence 6899999999999989999999999999999999999999764332222232232222111100 001
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1048 EMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1048 ~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
....+.+++.+||+.||++||+++|+++.+.
T Consensus 222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 222 FTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred CCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 1235679999999999999999976654443
No 120
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.3e-35 Score=331.43 Aligned_cols=249 Identities=23% Similarity=0.295 Sum_probs=198.5
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCC-CceeeEEEEEEeCCceEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRH-RNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 879 (1109)
+|++.+.||+|+||.||+|+.+ +++.||||+++.... .....+.+..|.+++..++| ++|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999865 578999999974321 22344667889999999976 56889999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~- 153 (324)
T cd05587 81 EYVNGGDLMYHIQQVGK---FKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF- 153 (324)
T ss_pred cCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC-
Confidence 99999999999976543 889999999999999999999 78999999999999999999999999999875321
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.........||+.|+|||++.+..++.++||||+||++|||+||+.||.+.. ..+..............
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~----~~~~~~~i~~~~~~~~~------- 222 (324)
T cd05587 154 GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED----EDELFQSIMEHNVSYPK------- 222 (324)
T ss_pred CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCCC-------
Confidence 1222344578999999999999999999999999999999999999997533 22222222211111110
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTM-----REVIAM 1076 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~-----~evl~~ 1076 (1109)
.....+.+++.+|++.||++|++. +++.++
T Consensus 223 -------~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 223 -------SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred -------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 112356789999999999999986 677665
No 121
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.6e-35 Score=335.43 Aligned_cols=244 Identities=25% Similarity=0.285 Sum_probs=196.3
Q ss_pred ceEecCCcceEEEEEe----cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEecc
Q 001274 808 AVIGRGACGTVYKATL----ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
+.||+|+||+||+++. .+|+.||+|+++...........+..|++++++++||||+++++++...+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999975 358899999997543333334567789999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC
Q 001274 884 NGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS 963 (1109)
Q Consensus 884 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 963 (1109)
+|+|.+++.+... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~ 154 (318)
T cd05582 82 GGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKK 154 (318)
T ss_pred CCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCc
Confidence 9999999976543 899999999999999999999 789999999999999999999999999999865422 122
Q ss_pred ccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhc
Q 001274 964 MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAK 1043 (1109)
Q Consensus 964 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1109)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..............
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~----~~~~~~~i~~~~~~~p~----------- 219 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD----RKETMTMILKAKLGMPQ----------- 219 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC----HHHHHHHHHcCCCCCCC-----------
Confidence 344678999999999999899999999999999999999999997532 22222222221111111
Q ss_pred ccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 001274 1044 RTVEEMTLFLKIALFCSSTSPLNRPTM-----REVIAM 1076 (1109)
Q Consensus 1044 ~~~~~~~~~~~li~~cl~~dP~~RPt~-----~evl~~ 1076 (1109)
.....+.+++.+||+.||++||++ .+++++
T Consensus 220 ---~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 220 ---FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred ---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 112346789999999999999994 556544
No 122
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.4e-35 Score=331.61 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=197.0
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|+.+ +++.||+|+++.... .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 688999999975422 223345677888888776 899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|..++..... +++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~~L~~~~~~~~~---l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~~~ 153 (329)
T cd05618 81 GDLMFHMQRQRK---LPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTT 153 (329)
T ss_pred CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CCcc
Confidence 999998876543 899999999999999999999 779999999999999999999999999999754311 2223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCccc----CCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLEL----GGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......++......... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~---------~- 223 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---------R- 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC---------C-
Confidence 446789999999999999999999999999999999999999964321 11222222222211110 0
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCC------HHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPT------MREVIAMM 1077 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt------~~evl~~L 1077 (1109)
.+......+.+++.+||+.||++||+ +++++++-
T Consensus 224 ---~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05618 224 ---IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 263 (329)
T ss_pred ---CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCC
Confidence 01111235678999999999999998 57887763
No 123
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.5e-35 Score=332.16 Aligned_cols=246 Identities=24% Similarity=0.318 Sum_probs=197.6
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
++||+|+||+||+|+.+ +++.||+|+++.... .....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36899999999999865 578999999974321 223345677888888766 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|..++..... +++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~ 153 (321)
T cd05591 81 GDLMFQIQRSRK---FDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN-GVTT 153 (321)
T ss_pred CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccC-Cccc
Confidence 999999876543 889999999999999999999 789999999999999999999999999998754321 2223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .................
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~----~~~~~~~i~~~~~~~p~------------ 217 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN----EDDLFESILHDDVLYPV------------ 217 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC----HHHHHHHHHcCCCCCCC------------
Confidence 44578999999999999999999999999999999999999997543 22222222222211111
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCC-------CHHHHHHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRP-------TMREVIAMMI 1078 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RP-------t~~evl~~L~ 1078 (1109)
.....+.+++.+|++.||++|| ++.+++++-+
T Consensus 218 --~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~ 256 (321)
T cd05591 218 --WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF 256 (321)
T ss_pred --CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCc
Confidence 0123567899999999999999 8899987753
No 124
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=330.48 Aligned_cols=255 Identities=25% Similarity=0.303 Sum_probs=213.7
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCceEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 877 (1109)
...|++.+.||.|.||.||+++.+ +|+.+|+|++..+... ....+.+.+|+++|+++. |||||.+.++|......++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 357888899999999999999976 4999999999765433 224568899999999998 9999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC----CceEEeecccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE----FQAHVGDFGLA 953 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DFG~a 953 (1109)
|||++.||.|.+.+... . +++.++..++.||+.++.||| +.+|+|||+||+|+|+... +.+|++|||+|
T Consensus 114 vmEL~~GGeLfd~i~~~--~--~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK--H--YSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEecCCchHHHHHHHc--c--CCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 99999999999999876 2 899999999999999999999 7899999999999999533 57999999999
Q ss_pred ccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 954 KLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
..... .......+||+.|+|||++...+|+.++||||+||++|.|++|..||.+...........+. .......
T Consensus 187 ~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~----~~~f~~~ 260 (382)
T KOG0032|consen 187 KFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG----DFDFTSE 260 (382)
T ss_pred eEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC----CCCCCCC
Confidence 98774 55667889999999999999999999999999999999999999999875533333322222 1111111
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.-......+.+++.+|+..||.+|+|+.++++|-|
T Consensus 261 ----------~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 261 ----------PWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred ----------CccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 11122345678999999999999999999999876
No 125
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.4e-35 Score=336.56 Aligned_cols=265 Identities=23% Similarity=0.268 Sum_probs=202.5
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD----- 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 873 (1109)
..++|++.+.||+|+||.||+|++. .++.||||++............+.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3478999999999999999999865 6889999999754444445567889999999999999999999876543
Q ss_pred -ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 874 -SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 874 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
..|+||||+++ ++.+++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 46899999965 77777743 2788899999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CCc
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PTS 1031 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~ 1031 (1109)
++.... ........+|..|+|||++.+..++.++||||+||++|||++|+.||.+..... .......... +..
T Consensus 173 a~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~~ 246 (364)
T cd07875 173 ARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID----QWNKVIEQLGTPCP 246 (364)
T ss_pred ccccCC--CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCCH
Confidence 986542 222344578999999999999999999999999999999999999997543211 1111111110 000
Q ss_pred hhhh-----------hh--------------c--chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1032 ELFD-----------KR--------------L--DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1032 ~~~~-----------~~--------------~--~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
+... .+ . .............+.+++.+|++.||.+|||+.|++++-+-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~ 321 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence 0000 00 0 00000011122457899999999999999999999998654
No 126
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=8.9e-35 Score=319.69 Aligned_cols=253 Identities=26% Similarity=0.413 Sum_probs=203.9
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++|++.++||+|+||.||+|..++++.||+|.+.... .....+.+|+.++++++|+||+++++++. .+..++||||
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS---MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC---CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 5788999999999999999998889999999987332 23567899999999999999999999864 4678999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||.+........
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 82 MENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 999999999876443 24899999999999999999999 78999999999999999999999999999986653222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||.+... .+.......... . +.
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~~~~~~-~-~~------- 224 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN----PEVIQNLERGYR-M-PR------- 224 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh----HHHHHHHHcCCC-C-CC-------
Confidence 22233456778999999998899999999999999999999 9999975331 111111111110 0 00
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
......++.+++.+||+.+|++||+++++++.|+.
T Consensus 225 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 ----PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01112358899999999999999999999998864
No 127
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=318.30 Aligned_cols=252 Identities=23% Similarity=0.358 Sum_probs=215.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+=|...+.||+|.|..|-+|++- +|+.||||++....-.......+.+|++.|+.++|||||++|++...+...|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 45777789999999999999854 79999999998766665566778899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee-CCCCceEEeeccccccccCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL-DEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~DFG~a~~~~~~ 959 (1109)
.-++|+|.+|+-++... +.+....+++.||+.|+.|+| +..+|||||||+||.+ ..-|-||++|||++..+.
T Consensus 98 LGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-- 170 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-- 170 (864)
T ss_pred ecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCC--
Confidence 99999999999877654 999999999999999999999 8899999999999877 567899999999998776
Q ss_pred CCCCccccccccceeccccccCCCCC-ccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVT-EKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
......+.+|+..|-|||++.+..|+ +++||||+|||+|-++.|+.||+.....+.+. ..+
T Consensus 171 PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT------------------mIm 232 (864)
T KOG4717|consen 171 PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT------------------MIM 232 (864)
T ss_pred CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh------------------hhh
Confidence 34566788999999999999999997 68999999999999999999999654322221 122
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
+..+..+.--..++.++|..|+..||.+|.+.++|+..-|
T Consensus 233 DCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 233 DCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred cccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 2222233444567889999999999999999999987755
No 128
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.9e-35 Score=334.00 Aligned_cols=249 Identities=23% Similarity=0.290 Sum_probs=198.0
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
+|++.+.||+|+||+||+|+.. +++.||||+++.... .....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999865 578999999975422 122334567788888777 5899999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~~---~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~- 153 (323)
T cd05616 81 EYVNGGDLMYQIQQVGR---FKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW- 153 (323)
T ss_pred cCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCC-
Confidence 99999999999876543 889999999999999999999 77999999999999999999999999999975431
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..............
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~----~~~~~~i~~~~~~~--------- 220 (323)
T cd05616 154 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELFQSIMEHNVAY--------- 220 (323)
T ss_pred CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCCC---------
Confidence 12223445789999999999999999999999999999999999999975432 22222211111111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTM-----REVIAM 1076 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~-----~evl~~ 1076 (1109)
+......+.+++.+|++.||++|++. .++.++
T Consensus 221 -----p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 221 -----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred -----CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 01112356789999999999999984 677655
No 129
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=8.1e-35 Score=330.95 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=198.6
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
++||+|+||+||+|++. +++.||+|+++..... ....+.+.+|..+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 6889999999754322 22345678899999888 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|.+++...+. +++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 g~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-~~~~~ 153 (329)
T cd05588 81 GDLMFHMQRQRK---LPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR-PGDTT 153 (329)
T ss_pred CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCcccccccc-CCCcc
Confidence 999998876543 899999999999999999999 78999999999999999999999999999875321 12223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCccc----CCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLEL----GGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||+.... .....++.......... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 224 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI---------RI 224 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC---------CC
Confidence 456789999999999999999999999999999999999999974321 11222233222221110 00
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCC------HHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPT------MREVIAMMI 1078 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt------~~evl~~L~ 1078 (1109)
+......+.+++.+|++.||++||+ +++++++-+
T Consensus 225 ----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~ 264 (329)
T cd05588 225 ----PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPF 264 (329)
T ss_pred ----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCC
Confidence 0011234678999999999999997 788887643
No 130
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.9e-35 Score=339.44 Aligned_cols=262 Identities=20% Similarity=0.240 Sum_probs=203.0
Q ss_pred HHHHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc
Q 001274 797 LLEATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 797 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 874 (1109)
+....++|++.+.||+|+||.||+|+++ +++.||+|++..... .......+.+|+.+++.++||||+++++++..++.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3445579999999999999999999976 688999999864321 12234567889999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++||||+++|+|.+++.... +++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~~----~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNYD----VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 999999999999999986542 788889999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCCCccccccccceeccccccCCC----CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC
Q 001274 955 LIDLPYSKSMSAIAGSYGYIAPEYAYTMK----VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1109)
..............||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... .............
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~----~~~~~~i~~~~~~- 265 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----VGTYSKIMNHKNS- 265 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCc-
Confidence 76432222334567999999999987543 78999999999999999999999985332 2222221111100
Q ss_pred chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHHHH
Q 001274 1031 SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLN--RPTMREVIAMMID 1079 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPt~~evl~~L~~ 1079 (1109)
... . ........+.+++.+|+..++.+ ||++.|++++.+.
T Consensus 266 ~~~-~--------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 266 LTF-P--------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred ccC-C--------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence 000 0 01112235678999999844433 7899999998654
No 131
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5.9e-35 Score=320.29 Aligned_cols=252 Identities=27% Similarity=0.405 Sum_probs=206.6
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|...+.||+|+||.||+|+.+ +++.|++|.+..........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677889999999999999865 689999999976554555667899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++..+..++.+++.|+.||| +.+++|+||||+||+++.++.++|+|||+++..... .
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~-~ 155 (256)
T cd08529 81 AENGDLHKLLKMQRG-RPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN-T 155 (256)
T ss_pred CCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCc-c
Confidence 999999999976522 24889999999999999999999 779999999999999999999999999998866532 2
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......+++.|+|||+..+..++.++||||||+++|||++|+.||.... .............+..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~---------- 221 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN----QGALILKIIRGVFPPV---------- 221 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCC----------
Confidence 22234568889999999999999999999999999999999999997543 1122222222111100
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.+|++||++.+++++
T Consensus 222 ---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 222 ---SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ---ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11223457899999999999999999999875
No 132
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6e-35 Score=324.86 Aligned_cols=256 Identities=27% Similarity=0.434 Sum_probs=204.1
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
++|.+.+.||+|+||.||+|+.. +++.||||+++.... ....+.+.+|++++++++|+||+++++++......
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 56888899999999999999863 247899999874322 22457899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCC-----------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQ-----------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQ 944 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 944 (1109)
++||||+++++|.+++...+. ...+++..+..++.|++.|+.||| +.+++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCe
Confidence 999999999999999976432 234788999999999999999999 789999999999999999999
Q ss_pred eEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHH
Q 001274 945 AHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRR 1022 (1109)
Q Consensus 945 ~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~ 1022 (1109)
++|+|||.++....... .......+++.|+|||++.+..++.++||||+||++|||++ |+.||..... .+.+..
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~----~~~~~~ 236 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN----EEVIEC 236 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH----HHHHHH
Confidence 99999999975432211 11223346788999999999999999999999999999999 9999875432 122222
Q ss_pred hhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1023 SIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
......+.. .......+.+++.+||+.+|++||++.||++.|.
T Consensus 237 ~~~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 ITQGRLLQR-------------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHcCCcCCC-------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 111111000 0112245789999999999999999999999885
No 133
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8e-35 Score=328.98 Aligned_cols=244 Identities=25% Similarity=0.304 Sum_probs=193.0
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||.||+|+++ +++.||+|+++.... .......+..|..++... +||+|+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999975 688999999975421 122345566788887654 899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|..++..... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++.... .....
T Consensus 81 g~L~~~i~~~~~---~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~~ 153 (316)
T cd05620 81 GDLMFHIQDKGR---FDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF-GDNRA 153 (316)
T ss_pred CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc-CCCce
Confidence 999999876543 889999999999999999999 78999999999999999999999999999874321 12223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .................
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~----~~~~~~~~~~~~~~~~~------------ 217 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD----EDELFESIRVDTPHYPR------------ 217 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCCCCC------------
Confidence 45678999999999999999999999999999999999999997532 12222221111111100
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMR-EVIAM 1076 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~-evl~~ 1076 (1109)
.....+.+++.+|++.||++||++. ++.++
T Consensus 218 --~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 218 --WITKESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred --CCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 0123467899999999999999984 66654
No 134
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=328.69 Aligned_cols=247 Identities=31% Similarity=0.459 Sum_probs=204.3
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
|.-.+.||+|+||.||-|++. +.+.||||++...+.+ .+...+++.|+..+++++|||++.+-|+|..+...++||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 455678999999999999965 6889999999876544 34567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
| -|+-.+++...+.. +.+.++..|+.+.+.||+||| +.+.||||||+.|||+++.|.||++|||.|....
T Consensus 108 C-lGSAsDlleVhkKp--lqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~---- 177 (948)
T KOG0577|consen 108 C-LGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA---- 177 (948)
T ss_pred H-hccHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcC----
Confidence 9 56888888766543 889999999999999999999 7899999999999999999999999999998654
Q ss_pred CCccccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 962 KSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
....++|||.|||||++. .+.|+-|+||||+|++..|+...++|+..+.. ..-+........|.
T Consensus 178 -PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA----MSALYHIAQNesPt-------- 244 (948)
T KOG0577|consen 178 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNESPT-------- 244 (948)
T ss_pred -chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH----HHHHHHHHhcCCCC--------
Confidence 234579999999999986 56799999999999999999999999765431 11111111112111
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
-...+....|..|+..|++.-|.+|||.++++.+-
T Consensus 245 ----Lqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 245 ----LQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred ----CCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 11455667899999999999999999999987653
No 135
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.2e-35 Score=332.78 Aligned_cols=245 Identities=25% Similarity=0.303 Sum_probs=196.9
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|++. +++.||||+++.... .......+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 578999999975421 223345677888888877 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|..++..... +++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-~~~~~ 153 (318)
T cd05570 81 GDLMFHIQRSGR---FDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL-GGVTT 153 (318)
T ss_pred CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCc-CCCcc
Confidence 999999876543 899999999999999999999 78999999999999999999999999999875321 12222
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....|++.|+|||++.+..++.++||||+||++|||++|+.||.... ...............
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~----~~~~~~~i~~~~~~~-------------- 215 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD----EDELFQSILEDEVRY-------------- 215 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC----HHHHHHHHHcCCCCC--------------
Confidence 34568999999999999999999999999999999999999997533 222222211111110
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTM-----REVIAMM 1077 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~-----~evl~~L 1077 (1109)
.......+.+++.+||+.||.+||++ .+++++-
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~ 253 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHP 253 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCC
Confidence 01112357799999999999999999 8888763
No 136
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=334.50 Aligned_cols=256 Identities=23% Similarity=0.373 Sum_probs=209.6
Q ss_pred CCCCceEecCCcceEEEEEe-cCC----cEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 804 FSEGAVIGRGACGTVYKATL-ANG----EVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~-~~~----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
.+..++||+|+||+||+|.+ .+| -+||||++.. .......+++++|+.+|.+++|||+++++|+|.... ..||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~-~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIE-FTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeec-cCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 44567999999999999974 344 3689998863 345566789999999999999999999999998766 7899
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
++||+.|+|.+|++.++.. +-.+..+.|..|||+||.||| ++++|||||.++||||.....+||+|||+|+....
T Consensus 776 tq~mP~G~LlDyvr~hr~~--igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDN--IGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HHhcccchHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 9999999999999987765 888999999999999999999 77999999999999999999999999999998764
Q ss_pred CCCCC-ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 959 PYSKS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 959 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
+.... .....-++.|||-|.+...+|+.++|||||||++||++| |..|+++.. .+++.+.++..-+
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~-~~eI~dlle~geR----------- 918 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP-AEEIPDLLEKGER----------- 918 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC-HHHhhHHHhcccc-----------
Confidence 33322 233445778999999999999999999999999999999 999998654 2223333332111
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
...+.-+...++.++.+||..|+..||+|+++.+.+.+....
T Consensus 919 -----LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 919 -----LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred -----CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 112233344578999999999999999999999988776444
No 137
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.1e-35 Score=336.72 Aligned_cols=262 Identities=25% Similarity=0.400 Sum_probs=205.5
Q ss_pred HhcCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeC
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQ 872 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 872 (1109)
..++|.+.++||+|+||.||+|++. .++.||+|+++.... ....+.+.+|++++.++. ||||+++++++...
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 3457888999999999999999853 346899999974422 233457889999999997 99999999999999
Q ss_pred CceEEEEEeccCCCHHHHhccCCC--------------------------------------------------------
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQ-------------------------------------------------------- 896 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 896 (1109)
+..++||||+++|+|.++++..+.
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 999999999999999999975421
Q ss_pred ---------------------------------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCce
Q 001274 897 ---------------------------------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNI 937 (1109)
Q Consensus 897 ---------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NI 937 (1109)
...+++..+..++.|++.|++||| +.+++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceE
Confidence 123677888999999999999999 78999999999999
Q ss_pred eeCCCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCc
Q 001274 938 LLDEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGD 1015 (1109)
Q Consensus 938 ll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~ 1015 (1109)
+++.++.+|++|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||......+.
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~ 350 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ 350 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence 999999999999999986532211 11223456788999999998889999999999999999998 8999875432221
Q ss_pred HHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1016 LVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
....+.. + .... ........+.+++.+||..+|++||+++||++.|+++.
T Consensus 351 ~~~~~~~---~-~~~~------------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 FYNAIKR---G-YRMA------------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHc---C-CCCC------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111111 1 1000 00111246789999999999999999999999998864
No 138
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.4e-35 Score=341.58 Aligned_cols=255 Identities=22% Similarity=0.261 Sum_probs=195.4
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+|+..++||+|+||+||+|+.. +++.||+|++..... .......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999864 688999999874321 12234578899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++|+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMGI---FPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 9999999999976543 788999999999999999999 7799999999999999999999999999975321000
Q ss_pred C----------------------------------------------CCccccccccceeccccccCCCCCccchhHHHH
Q 001274 961 S----------------------------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFG 994 (1109)
Q Consensus 961 ~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 994 (1109)
. ......+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0 001234689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCC---HH
Q 001274 995 VVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPT---MR 1071 (1109)
Q Consensus 995 vll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt---~~ 1071 (1109)
|++|||++|+.||...... +............. ... .......+.+++.+++ .+|++|++ +.
T Consensus 236 vil~elltG~~Pf~~~~~~----~~~~~i~~~~~~~~--~p~--------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPL----ETQMKVINWQTSLH--IPP--------QAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred HHHHHHHhCCCCCCCCCHH----HHHHHHHccCCCcC--CCC--------cccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 9999999999999754321 11111111000000 000 0001123456666654 59999997 99
Q ss_pred HHHHHHH
Q 001274 1072 EVIAMMI 1078 (1109)
Q Consensus 1072 evl~~L~ 1078 (1109)
++++|-+
T Consensus 301 ei~~hp~ 307 (382)
T cd05625 301 EIKAHPF 307 (382)
T ss_pred HHhcCCC
Confidence 9887743
No 139
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.4e-34 Score=317.59 Aligned_cols=262 Identities=24% Similarity=0.369 Sum_probs=210.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||.||+|... +++.||+|.++.... .....+.+.+|++++++++|++++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999976 799999998864322 2233567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 880 EYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
||+++|+|.+++.... ....+++..+..++.+++.|++||| +.+++||||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999986532 2234889999999999999999999 78999999999999999999999999999876542
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
. ........++..|+|||++.+..++.++||||+||++|+|++|+.||.... ....+..........+.. .
T Consensus 159 ~-~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~--~---- 229 (267)
T cd08224 159 K-TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK--MNLYSLCKKIEKCDYPPL--P---- 229 (267)
T ss_pred C-CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC--ccHHHHHhhhhcCCCCCC--C----
Confidence 2 112233468889999999999899999999999999999999999986432 222222222111111100 0
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.......+.+++.+||+.+|++||++.+|++++.++.
T Consensus 230 ------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 230 ------ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0122345779999999999999999999999998763
No 140
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.4e-35 Score=346.00 Aligned_cols=252 Identities=23% Similarity=0.279 Sum_probs=201.7
Q ss_pred CCCCCceEecCCcceEEEEEec-C-CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-N-GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.|.+.+.||+|+||.||+|... + ++.||+|++.... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 4888999999999999999754 3 6788888765332 2334567789999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 881 YMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
|+++|+|.+++.... ....+++..+..++.||+.||+|+| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 999999999886432 2234889999999999999999999 789999999999999999999999999999876432
Q ss_pred CC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 960 YS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 960 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.+........+..
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~----~~~~~~~~~~~~~~~~------- 291 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS----QREIMQQVLYGKYDPF------- 291 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCCCC-------
Confidence 22 12344579999999999999999999999999999999999999997532 2233332222221100
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.||++||++++++.+
T Consensus 292 ------~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 292 ------PCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ------CccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 01112357799999999999999999999754
No 141
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-34 Score=327.36 Aligned_cols=244 Identities=24% Similarity=0.336 Sum_probs=192.9
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhcc-CCCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGK-IRHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|++. +++.||||+++.... .......+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 578999999975421 12234556678888776 4899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 g~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~ 153 (316)
T cd05619 81 GDLMFHIQSCHK---FDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG-DAKT 153 (316)
T ss_pred CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-CCce
Confidence 999999976433 889999999999999999999 789999999999999999999999999998753211 1223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..+........ +..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~----~~~~~~~i~~~~~~----~~~-------- 217 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD----EEELFQSIRMDNPC----YPR-------- 217 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCC----CCc--------
Confidence 44578999999999999999999999999999999999999997533 12222221111110 010
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMR-EVIAM 1076 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~-evl~~ 1076 (1109)
.....+.+++.+||+.||++||++. ++.++
T Consensus 218 --~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 218 --WLTREAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred --cCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 1113467899999999999999997 67654
No 142
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1e-34 Score=319.76 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=202.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC---cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG---ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
++|+..+.||+|++|.||+|... +++.||+|.+...... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46889999999999999999864 6899999998644222 1223568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
|+||+++++|.+++..... +++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.++...
T Consensus 82 v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGA---LTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 9999999999999976543 788999999999999999999 7899999999999999999999999999997654
Q ss_pred CCCCCCc--cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 958 LPYSKSM--SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 958 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
....... ....++..|+|||++.+..++.++||||+|+++|||++|+.||..... . ............ ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~-~~~~~~~~~~~~--~~~- 228 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA---M-AAIFKIATQPTN--PQL- 228 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch---H-HHHHHHhccCCC--CCC-
Confidence 2211111 334578899999999999999999999999999999999999875321 1 111111111100 000
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.......+.+++.+||..+|.+|||+.+++++.
T Consensus 229 ---------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 229 ---------PSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred ---------CccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 111223577899999999999999999999864
No 143
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.3e-34 Score=318.47 Aligned_cols=253 Identities=26% Similarity=0.435 Sum_probs=201.9
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++|++.++||+|+||.||+|.++.+..||+|++.... ...+.+.+|++++++++|+|++++++++. .+..++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 4688889999999999999998877789999876332 23467889999999999999999999875 4568999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++..+..++.|++.|++||| +.+++|+||||+||++++++.++|+|||.++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 82 MGKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 999999999976432 23789999999999999999999 77999999999999999999999999999986643222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||+..+..++.++||||+|+++|||++ |+.||.+.... ....++.. . ....
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~~---~-~~~~--------- 223 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-EVLEQVER---G-YRMP--------- 223 (260)
T ss_pred cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHc---C-CCCC---------
Confidence 22233456778999999998899999999999999999999 89998753211 11111111 1 1100
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
........+.+++.+||..+|++||+++++++.|++
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 ---CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011123467899999999999999999999999864
No 144
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9.2e-35 Score=334.69 Aligned_cols=269 Identities=22% Similarity=0.256 Sum_probs=202.4
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD----- 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 873 (1109)
..++|++.+.||+|+||.||+|++. .++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999864 6889999999755444445567889999999999999999999886543
Q ss_pred -ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 874 -SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 874 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
..++||||+++ ++.+++.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 46899999965 67666643 2788899999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHh---------
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRS--------- 1023 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~--------- 1023 (1109)
++.... ........+|..|+|||++.+..++.++||||+||++|||++|+.||.+..........+...
T Consensus 166 ~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 166 ARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred cccCCC--ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 986542 222344578999999999999999999999999999999999999997543211111111100
Q ss_pred ---------hhccCCC-----chhhhhh-cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1024 ---------IHEMVPT-----SELFDKR-LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1024 ---------~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
....... ...+... ..............+.+++.+|++.||++|||+.|++++-+-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~ 314 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYI 314 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcch
Confidence 0000000 0000000 000000011123457899999999999999999999998654
No 145
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.7e-35 Score=322.64 Aligned_cols=254 Identities=27% Similarity=0.381 Sum_probs=200.7
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|+||.||+|+. .+++.||+|++..... .....+.+|+.++++++||||+++++++..++..++|||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 5799999999999999999996 4688999999864322 234567899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.++++.... +++..+..++.|++.|+.||| +.+|+|||++|+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~- 159 (267)
T cd06646 87 YCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT- 159 (267)
T ss_pred CCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccc-
Confidence 9999999999875443 889999999999999999999 779999999999999999999999999999865422
Q ss_pred CCCccccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
........+++.|+|||.+. ...++.++||||+||++|||++|+.||...........+.. ...... .
T Consensus 160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~----~~~~~~-----~ 230 (267)
T cd06646 160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK----SNFQPP-----K 230 (267)
T ss_pred ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec----CCCCCC-----C
Confidence 12223456888999999874 44578899999999999999999999864321111100000 000000 0
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.. ........+.+++.+||+.+|++||+++++++++
T Consensus 231 ~~----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LK----DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred Cc----cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00 0111234678999999999999999999999865
No 146
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=7.7e-35 Score=328.70 Aligned_cols=268 Identities=22% Similarity=0.348 Sum_probs=203.5
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|.+.++||+|+||+||+|+.+ +++.||+|+++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 57889999999999999999865 688899999875432 2234567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++ ++.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.++......
T Consensus 85 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 85 YLDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 9975 88888866543 3788999999999999999999 7899999999999999999999999999997654221
Q ss_pred CCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc-
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL- 1038 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1038 (1109)
.......+++.|+|||++.+ ..++.++||||+||++|||+||+.||.+....+......+ .... +..+.+....
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~ 234 (309)
T cd07872 159 -KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR-LLGT--PTEETWPGISS 234 (309)
T ss_pred -cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-HhCC--CCHHHHhhhcc
Confidence 22234467899999998865 4689999999999999999999999975432222111111 1100 0011100000
Q ss_pred -------chh-------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1039 -------DLS-------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1039 -------~~~-------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
... ..........+.+++.+|++.||++|||++|++++-+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~ 290 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFR 290 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence 000 000011234567999999999999999999999987654
No 147
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.8e-35 Score=334.14 Aligned_cols=244 Identities=25% Similarity=0.296 Sum_probs=193.0
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHH-HhccCCCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEIS-TLGKIRHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|++. +++.||+|++..... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 689999999974322 1122344555555 46789999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|.+++..... +++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~ 153 (323)
T cd05575 81 GELFFHLQRERS---FPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE-HSKTT 153 (323)
T ss_pred CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc-CCCcc
Confidence 999999876543 889999999999999999999 78999999999999999999999999999875321 12223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.............
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~----~~~~~~~i~~~~~~~~------------- 216 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD----TAEMYDNILNKPLRLK------------- 216 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC----HHHHHHHHHcCCCCCC-------------
Confidence 45578999999999999999999999999999999999999997532 2222222222211110
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHH----HHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMR----EVIAM 1076 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~----evl~~ 1076 (1109)
......+.+++.+|++.||++||+++ +++++
T Consensus 217 -~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 217 -PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred -CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 01123577899999999999999984 66654
No 148
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.4e-34 Score=319.54 Aligned_cols=258 Identities=22% Similarity=0.361 Sum_probs=200.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCc----EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGE----VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
++|++.+.||+|+||+||+|++. +++ .|++|++... .......++..|+..+++++||||+++++++. ....+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccE
Confidence 46888899999999999999864 444 4777776422 22233457788888999999999999999875 45578
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+++||+++|+|.+++..... .+++..+..++.||+.|++||| +++++||||||+||+++.++.+||+|||.++..
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 99999999999999976543 3899999999999999999999 779999999999999999999999999999865
Q ss_pred cCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 957 DLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 957 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
..... .......++..|+|||++.++.++.++|||||||++||+++ |+.||.+... ....+++.... ..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~--~~~~~~-- 234 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP-HEVPDLLEKGE--RLAQPQ-- 234 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHCCC--cCCCCC--
Confidence 32211 11233457788999999999999999999999999999998 9999975431 11122222110 000000
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
.....+..++.+||+.+|++|||+.|+++.+..+.+.
T Consensus 235 ------------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 235 ------------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred ------------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 0112467889999999999999999999999887653
No 149
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-34 Score=323.33 Aligned_cols=266 Identities=30% Similarity=0.405 Sum_probs=200.5
Q ss_pred CCCCceEecCCcceEEEEEe-----cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--CceE
Q 001274 804 FSEGAVIGRGACGTVYKATL-----ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSNL 876 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 876 (1109)
|+..+.||+|+||+||++.. .+++.||+|.++... .......+.+|++++++++||||+++++++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 48889999999999988642 357889999987432 223456788999999999999999999988764 3578
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+||||+++++|.+++.... +++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||+++..
T Consensus 85 lv~e~~~~~~l~~~~~~~~----l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKHK----LNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEecCCCCCCHHHHHHHcC----CCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 9999999999999997542 899999999999999999999 779999999999999999999999999999866
Q ss_pred cCCCCC--CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc--cCCCch
Q 001274 957 DLPYSK--SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE--MVPTSE 1032 (1109)
Q Consensus 957 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~ 1032 (1109)
...... ......++..|+|||+..+..++.++||||||+++|||++|+.||..... ...+........ .....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK--KFEEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcc--hhhhhhcccccccchhhhhh
Confidence 422111 11223456679999999988999999999999999999999999864321 111111000000 000000
Q ss_pred hhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1033 LFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
..+..... .........+.+++.+||+.+|++|||++++++.++.+.
T Consensus 236 ~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 236 LLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11111000 001122356889999999999999999999999998764
No 150
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-34 Score=324.09 Aligned_cols=267 Identities=24% Similarity=0.296 Sum_probs=196.7
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC---CCCceeeEEEEEEeC-----C
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI---RHRNIVKLYGFCYHQ-----D 873 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~ 873 (1109)
+|++.+.||+|+||+||+|++. +++.||+|.++...........+.+|+++++.+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999865 689999999875433333334566777777665 799999999988652 3
Q ss_pred ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLA 953 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 953 (1109)
..++||||++ ++|.+++..... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 4689999997 489888876432 23899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhh---ccCCC
Q 001274 954 KLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIH---EMVPT 1030 (1109)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~---~~~~~ 1030 (1109)
+.... ........+|..|+|||++.+..++.++||||+||++|||++|+.||.................. ...+.
T Consensus 156 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 156 RIYSC--QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred ccccC--cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 86542 12223456889999999999999999999999999999999999999754322222111111000 00000
Q ss_pred c-----hhhhhh-cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1031 S-----ELFDKR-LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1031 ~-----~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
. ..+.+. .........+....+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 000000 000000111223457899999999999999999999875
No 151
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.4e-35 Score=342.24 Aligned_cols=256 Identities=22% Similarity=0.259 Sum_probs=197.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
.+|++.++||+|+||+||+|+.. +++.||||++..... .......+.+|++++++++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999865 689999999864321 1223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++...+. +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|..+...
T Consensus 81 E~~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIRLGI---FEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 99999999999976543 788999999999999999999 789999999999999999999999999997532100
Q ss_pred C------------------------------------------CCCccccccccceeccccccCCCCCccchhHHHHHHH
Q 001274 960 Y------------------------------------------SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVL 997 (1109)
Q Consensus 960 ~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll 997 (1109)
. ........||+.|+|||++.+..++.++||||+||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0 0001234799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCC---CHHHHH
Q 001274 998 LELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRP---TMREVI 1074 (1109)
Q Consensus 998 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP---t~~evl 1074 (1109)
|||++|+.||..... .+............ . ... .......+.+++.+|+ .+|++|+ ++.+++
T Consensus 235 yell~G~~Pf~~~~~----~~~~~~i~~~~~~~-~-~~~--------~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 235 YEMLVGQPPFLADTP----AETQLKVINWETTL-H-IPS--------QAKLSREASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred eehhhCCCCCCCCCH----HHHHHHHhccCccc-c-CCC--------CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 999999999975432 11111111100000 0 000 0011223556777765 4999999 999999
Q ss_pred HHHH
Q 001274 1075 AMMI 1078 (1109)
Q Consensus 1075 ~~L~ 1078 (1109)
++-+
T Consensus 300 ~h~~ 303 (376)
T cd05598 300 AHPF 303 (376)
T ss_pred CCCC
Confidence 8844
No 152
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-34 Score=349.75 Aligned_cols=265 Identities=25% Similarity=0.307 Sum_probs=204.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.++||+|+||+||+|++. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999865 5899999998743222 233467899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCC--------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 880 EYMENGSLGEQLHGNKQ--------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
||++||+|.+++..... ....++..+.+++.||++||+||| +.+|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999864211 123567788899999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCC-----------------CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC
Q 001274 952 LAKLIDLPYS-----------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGG 1014 (1109)
Q Consensus 952 ~a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~ 1014 (1109)
+++....... .......||+.|+|||++.+..++.++||||+||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521100 01123468999999999999999999999999999999999999997532111
Q ss_pred cHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHhhhcc
Q 001274 1015 DLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRP-TMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-t~~evl~~L~~~~~~~ 1084 (1109)
.. ........ ... .+ ..+....+.+++.+|++.||++|| +++++.+.++...+..
T Consensus 239 -i~--~~~~i~~P---~~~-~p--------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~ 294 (932)
T PRK13184 239 -IS--YRDVILSP---IEV-AP--------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGS 294 (932)
T ss_pred -hh--hhhhccCh---hhc-cc--------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcC
Confidence 00 00100000 000 00 112224577899999999999996 5677777777765543
No 153
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.6e-37 Score=339.82 Aligned_cols=361 Identities=29% Similarity=0.438 Sum_probs=238.6
Q ss_pred EEEccCCccc-CCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCcccCCCCcchhcccccceEEcccc
Q 001274 316 EIDLSENQLT-GFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDN 394 (1109)
Q Consensus 316 ~L~Ls~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 394 (1109)
-+|+|+|.++ +..|.....+++++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+..++.|+.+.+.+|
T Consensus 11 GvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N 88 (1255)
T KOG0444|consen 11 GVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDN 88 (1255)
T ss_pred cccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhcc
Confidence 3444444444 234444444445555555444444 45566666666666666666665 44455666666666666666
Q ss_pred cccc-cCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCCccccCCCCCCCccccccceeecccccccccCC
Q 001274 395 HLEG-TIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLP 473 (1109)
Q Consensus 395 ~l~~-~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 473 (1109)
++.. -+|..+..+..|.+||||+|++. ..|..+-.-.++..|+|++|+|..+..+.|.+++.|-.|+|++|++. .+|
T Consensus 89 ~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LP 166 (1255)
T KOG0444|consen 89 NLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLP 166 (1255)
T ss_pred ccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcC
Confidence 6642 35556666666666666666666 55666666666666666666666555555666666667777777766 445
Q ss_pred ccccCCcccceeccccccccCCCCccccccccccEEEccCCccC-CCCChhhcccccccEEecccCcccccCCcCCCCCC
Q 001274 474 IEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFV-GYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCV 552 (1109)
Q Consensus 474 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 552 (1109)
.....+.+|++|+|++|.+....-..+..+++|+.|++++.+=+ .-+|.++..+.+|..+|||.|.+. .+|+++-+++
T Consensus 167 PQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~ 245 (1255)
T KOG0444|consen 167 PQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLR 245 (1255)
T ss_pred HHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhh
Confidence 55666777777777777665443344555666777777765432 246777777777777777777777 7777777777
Q ss_pred CCCeeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcccceeeccCcccc-ccccccccccchhhhhhc
Q 001274 553 NLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFS-GSIPVALGQLTALQIALN 631 (1109)
Q Consensus 553 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~l~~~L~ 631 (1109)
+|+.|+||+|+|+ .+....+...+|++|+||.|+++ .+|+++..|++|+.|++.+|+++ .-||..|++|..|. .+.
T Consensus 246 ~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Le-vf~ 322 (1255)
T KOG0444|consen 246 NLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLE-VFH 322 (1255)
T ss_pred hhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhH-HHH
Confidence 7777777777777 45555666677777777777777 67777777777777777777776 35777777777776 367
Q ss_pred cCCccccccccccccCccccceeecCCCccccCCchhhhccccceEEEccCcccc
Q 001274 632 ISHNNLSGVIPYELGNLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLSNNNLV 686 (1109)
Q Consensus 632 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls~N~l~ 686 (1109)
.++|+|. .+|+.+..+..|+.|.|++|+|. ++|..+--++.|++|||..|+=-
T Consensus 323 aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 323 AANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 7777776 67777777788888888888877 77777777777888888777543
No 154
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1e-34 Score=319.38 Aligned_cols=255 Identities=27% Similarity=0.431 Sum_probs=206.5
Q ss_pred hcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.++|++.++||+|+||+||+|..++++.||||.+.... ...+++.+|++++++++|+||+++++++......++|||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc---cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 46789999999999999999998888899999987432 245678999999999999999999999998899999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... ..+++..+..++.+++.|++||| +.+++|+||||+||+++.++.++++|||.+.......
T Consensus 82 ~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 82 YMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred ccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 9999999999977542 23899999999999999999999 7799999999999999999999999999998664322
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
........++..|+|||.+.+..++.++||||+|+++||+++ |+.||.+... ...............
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~----~~~~~~~~~~~~~~~-------- 225 (261)
T cd05034 158 YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN----REVLEQVERGYRMPR-------- 225 (261)
T ss_pred hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcCCCCCC--------
Confidence 222223345678999999998899999999999999999999 9999965331 122222111110000
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 226 -----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 226 -----PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00112457899999999999999999999998864
No 155
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.4e-34 Score=323.22 Aligned_cols=261 Identities=26% Similarity=0.416 Sum_probs=206.4
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
.+|.+.+.||+|+||+||++... ++..||+|.+.... ....+.+.+|++++++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 82 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 56888999999999999999742 34568999886332 23456789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCC----------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCce
Q 001274 876 LLLYEYMENGSLGEQLHGNKQ----------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQA 945 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 945 (1109)
++||||+++++|.+++...+. ...+++..+..++.|++.|++||| +.+++||||||+||++++++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcE
Confidence 999999999999999975431 123899999999999999999999 7799999999999999999999
Q ss_pred EEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHh
Q 001274 946 HVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRS 1023 (1109)
Q Consensus 946 kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~ 1023 (1109)
+|+|||.++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+.....
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~----~~~~~~i 235 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN----NEVIECI 235 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHH
Confidence 9999999986532211 11123345778999999999899999999999999999999 8999875432 1112221
Q ss_pred hhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1024 IHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
........ .......+.+++.+||+.+|.+|||+.++.+.|+++....
T Consensus 236 ~~~~~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 236 TQGRVLQR-------------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HcCCcCCC-------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 11111000 0011235789999999999999999999999999887653
No 156
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.1e-34 Score=319.66 Aligned_cols=255 Identities=25% Similarity=0.316 Sum_probs=201.5
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
|+..+.||+|+||+||+|++. +++.||+|++...... ......+.+|++++++++|++|+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 666789999999999999865 6899999998643222 12234578899999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++...+. ..+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++..... .
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~--~ 155 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE--G 155 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCC--C
Confidence 999999988865432 23899999999999999999999 78999999999999999999999999999976532 1
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||........... +........ ..+
T Consensus 156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~-~~~~~~~~~---~~~------- 224 (285)
T cd05632 156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE-VDRRVLETE---EVY------- 224 (285)
T ss_pred CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhhhccc---ccc-------
Confidence 222345789999999999999999999999999999999999999975432111111 111111110 011
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPT-----MREVIAMMI 1078 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~ 1078 (1109)
.......+.+++.+|++.||++||+ +.+++++-+
T Consensus 225 ---~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~ 263 (285)
T cd05632 225 ---SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPF 263 (285)
T ss_pred ---CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChh
Confidence 1111234678999999999999999 788887743
No 157
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.5e-34 Score=322.50 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=204.2
Q ss_pred cCCCCCceEecCCcceEEEEEecC-Cc--EEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN-GE--VIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 877 (1109)
++|++.+.||+|+||.||+|+.++ +. .+++|.++.. ......+.+.+|++++.++ +||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 478889999999999999998653 33 4788887632 2223446788999999999 79999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 001274 878 LYEYMENGSLGEQLHGNKQ-------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQ 944 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 944 (1109)
||||+++++|.+++..... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCe
Confidence 9999999999999975431 124788999999999999999999 789999999999999999999
Q ss_pred eEEeeccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHh
Q 001274 945 AHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRS 1023 (1109)
Q Consensus 945 ~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~ 1023 (1109)
+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||.... ..+.....
T Consensus 158 ~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~----~~~~~~~~ 231 (297)
T cd05089 158 SKIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT----CAELYEKL 231 (297)
T ss_pred EEECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHH
Confidence 999999998743211 11111233567999999999899999999999999999998 999997533 22222221
Q ss_pred hhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccCC
Q 001274 1024 IHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVSD 1086 (1109)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 1086 (1109)
.....+. ........+.+++.+||+.+|.+||+++++++.|..+......
T Consensus 232 ~~~~~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 232 PQGYRME-------------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred hcCCCCC-------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1111100 0011123577999999999999999999999999988876533
No 158
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=330.39 Aligned_cols=250 Identities=24% Similarity=0.400 Sum_probs=202.6
Q ss_pred CCceEecCCcceEEEEEec--CCc--EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 806 EGAVIGRGACGTVYKATLA--NGE--VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 806 ~~~~lG~G~fg~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
..++||+|.||.||+|.|+ .|+ .||||.++...... ...+|++|+.+|.+++|+|++++||+..+ ....+|||.
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 3467999999999999876 343 58999998554443 56789999999999999999999999887 778899999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
++.|+|.+.|++ ..+..+-......++.|||.||.||. .+++|||||.++|+++-....|||+|||+.+-+.....
T Consensus 192 aplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 192 APLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred cccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 999999999998 33345888899999999999999999 78999999999999999999999999999997753322
Q ss_pred CC--ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 962 KS--MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 962 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.. .....-++.|+|||.+....|+.++|||+|||++|||+| |..||-+... .+.++. +.. .+
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g----~qIL~~-iD~----~e------ 332 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG----IQILKN-IDA----GE------ 332 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH----HHHHHh-ccc----cc------
Confidence 21 123345778999999999999999999999999999999 8899986432 122221 110 00
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.......+.+.+++++..||...|++||||.+|.+.+-
T Consensus 333 --rLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 333 --RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred --cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 01124455677999999999999999999999985543
No 159
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.3e-34 Score=315.76 Aligned_cols=248 Identities=23% Similarity=0.372 Sum_probs=196.9
Q ss_pred eEecCCcceEEEEEec---CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 809 VIGRGACGTVYKATLA---NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
+||+|+||.||+|.++ ++..||+|+++.........+++.+|+.+++.++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999643 5788999998755444445678899999999999999999999875 45678999999999
Q ss_pred CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC--
Q 001274 886 SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS-- 963 (1109)
Q Consensus 886 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-- 963 (1109)
+|.+++..... +++..+..++.|++.|++|+| +++|+||||||+||+++.++.+||+|||.++.........
T Consensus 81 ~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQKNKH---VTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 99999976443 899999999999999999999 7899999999999999999999999999998664322211
Q ss_pred ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhh
Q 001274 964 MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSA 1042 (1109)
Q Consensus 964 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1109)
.....++..|+|||++....++.++|||||||++|||++ |+.||..... ......+..... .+.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~i~~~~~--~~~------------ 219 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-NEVTQMIESGER--MEC------------ 219 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHCCCC--CCC------------
Confidence 122234678999999988889999999999999999998 9999975431 122222221100 000
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1043 KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1043 ~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.......+.+++.+||+.||++||++++|++.|++.
T Consensus 220 --~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 --PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 011223577999999999999999999999998753
No 160
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.7e-34 Score=321.41 Aligned_cols=261 Identities=26% Similarity=0.410 Sum_probs=206.5
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
++|.+.+.||+|+||.||+|+.. ++..|++|.++... ....+.+.+|++++++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 46788899999999999999742 34568888876322 23346788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 001274 876 LLLYEYMENGSLGEQLHGNKQ-------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE 942 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~ 942 (1109)
++||||+++++|.+++..... ...+++..+..++.||+.|++||| +++++||||||+||+++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccC
Confidence 999999999999999975431 123789999999999999999999 7899999999999999999
Q ss_pred CceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHH
Q 001274 943 FQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWV 1020 (1109)
Q Consensus 943 ~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~ 1020 (1109)
+.++|+|||++........ .......++..|+|||++.+..++.++||||||+++|||+| |+.||..... .+.+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~ 235 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN----TEVI 235 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHH
Confidence 9999999999976542211 11223456788999999999999999999999999999999 9999865331 1122
Q ss_pred HHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1021 RRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
........+.. .......+.+++.+||+.+|++||++.+|++++.++....
T Consensus 236 ~~~~~~~~~~~-------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 236 ECITQGRVLER-------------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HHHhCCCCCCC-------------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 21111111100 0112245789999999999999999999999999986543
No 161
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-34 Score=322.85 Aligned_cols=256 Identities=25% Similarity=0.408 Sum_probs=201.5
Q ss_pred cCCCCCceEecCCcceEEEEEe-----cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-----ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
.+|++.++||+|+||+||+|+. .+++.||+|.++... .......+.+|++++++++||||+++++++..++..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 4678889999999999999974 246789999987432 2234467889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhccCCC--------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 001274 877 LLYEYMENGSLGEQLHGNKQ--------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE 942 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~ 942 (1109)
+||||+++++|.+++..... ...+++..+..++.|++.|++||| +.+++||||||+||+++.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCC
Confidence 99999999999999853321 124788899999999999999999 7799999999999999999
Q ss_pred CceEEeeccccccccCCC-CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHH
Q 001274 943 FQAHVGDFGLAKLIDLPY-SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWV 1020 (1109)
Q Consensus 943 ~~~kl~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~ 1020 (1109)
+.+||+|||+++...... ........++..|+|||++.+..++.++|||||||++|||++ |..||.+... ....+.+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~~ 239 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIEMV 239 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHH
Confidence 999999999998653221 112233446778999999998899999999999999999999 9999875321 1112222
Q ss_pred HHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1021 RRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.. ... .. . .......+.+++.+||+.||++||++.++.+++.
T Consensus 240 ~~---~~~-~~--~----------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 240 RK---RQL-LP--C----------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred Hc---CCc-CC--C----------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 11 111 00 0 0011235778999999999999999999999875
No 162
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.8e-34 Score=319.69 Aligned_cols=257 Identities=25% Similarity=0.390 Sum_probs=201.8
Q ss_pred CCCCceEecCCcceEEEEEecC----CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc-----
Q 001274 804 FSEGAVIGRGACGTVYKATLAN----GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS----- 874 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 874 (1109)
|.+.+.||+|+||.||+|.+.. +..||+|+++...........+.+|++.++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998642 3679999997554444445678999999999999999999998876554
Q ss_pred -eEEEEEeccCCCHHHHhccCC---CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 001274 875 -NLLLYEYMENGSLGEQLHGNK---QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDF 950 (1109)
Q Consensus 875 -~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 950 (1109)
.++||||+++|+|..++.... ....+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 689999999999999985432 1224899999999999999999999 779999999999999999999999999
Q ss_pred cccccccCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccC
Q 001274 951 GLAKLIDLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMV 1028 (1109)
Q Consensus 951 G~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 1028 (1109)
|.++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.+... .+..........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~----~~~~~~~~~~~~ 233 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN----HEIYDYLRHGNR 233 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcCCC
Confidence 999865422211 1122345678999999988899999999999999999999 8899875331 122222111111
Q ss_pred CCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1029 PTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
+. ........+.+++.+||+.||.+||++.|+++.|.++
T Consensus 234 ~~-------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 LK-------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC-------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0111234678999999999999999999999999865
No 163
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.4e-34 Score=316.49 Aligned_cols=248 Identities=24% Similarity=0.346 Sum_probs=195.8
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGS 886 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 886 (1109)
+.||+|+||+||+|++. +++.||+|.+... ........+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 36899999999999865 6899999987633 223345678999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc-c
Q 001274 887 LGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM-S 965 (1109)
Q Consensus 887 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-~ 965 (1109)
|.+++..... .+++..+..++.|+++||+||| +.+++||||||+||+++.++.+|++|||.++.......... .
T Consensus 80 L~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 80 FLTFLRTEGP--RLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 9999976443 3889999999999999999999 78999999999999999999999999999976442111111 1
Q ss_pred ccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 966 AIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 966 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....+..|+|||.+.++.++.++||||+|+++|||++ |..||...... .....+. ...+. . .
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-~~~~~~~----~~~~~-~-----------~ 217 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-QTREAIE----QGVRL-P-----------C 217 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-HHHHHHH----cCCCC-C-----------C
Confidence 1123567999999999999999999999999999998 88888643211 1111111 11100 0 0
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.......+.+++.+|++.+|++||++.++.++|.
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1112346789999999999999999999999875
No 164
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.9e-34 Score=320.22 Aligned_cols=269 Identities=22% Similarity=0.322 Sum_probs=201.6
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.+.||+|+||.||+|+.+ +++.||+|+++.........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999865 689999999875544334456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
++ ++|.+++........+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++.....+.
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 689888876544345899999999999999999999 7899999999999999999999999999997654221
Q ss_pred CCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc---cCC---Cchhh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE---MVP---TSELF 1034 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~---~~~---~~~~~ 1034 (1109)
.......+++.|+|||++.+. .++.++||||+||++|||+||+.||.+................. ..+ ....+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 122334568899999988654 47899999999999999999999997543211111111110000 000 00000
Q ss_pred hhhcchh-----hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1035 DKRLDLS-----AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1035 ~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
....... .........++.+++.+||+.||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000 00001123456799999999999999999999875
No 165
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.6e-34 Score=315.68 Aligned_cols=248 Identities=26% Similarity=0.375 Sum_probs=198.3
Q ss_pred ceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 808 AVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
++||+|+||.||+|...+++.||+|++.... .......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 3689999999999998888999999886432 223345688999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcccc
Q 001274 888 GEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAI 967 (1109)
Q Consensus 888 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 967 (1109)
.+++..... .+++..+..++.+++.|+.|+| +.+++||||||+||+++.++.+|++|||+++.............
T Consensus 80 ~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 80 LSFLRKKKD--ELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 999876543 3789999999999999999999 78999999999999999999999999999975442222122223
Q ss_pred ccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccH
Q 001274 968 AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTV 1046 (1109)
Q Consensus 968 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
.+++.|+|||++.+..++.++||||||+++||+++ |..||...... ..... ........ . ..
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~----~~~~~-~~~~~~~~-~-----------~~ 217 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ----QAREQ-VEKGYRMS-C-----------PQ 217 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH----HHHHH-HHcCCCCC-C-----------CC
Confidence 44678999999998899999999999999999999 99999754211 11111 11111000 0 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1047 EEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1047 ~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.....+.+++.+||+.+|++||++.|++++|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 12346889999999999999999999998874
No 166
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-37 Score=308.97 Aligned_cols=249 Identities=27% Similarity=0.420 Sum_probs=206.7
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
|.+..+||+|+||.||+|.++ .|+.||||++... ...+++.+|+.+|++++.|++|++||.+......++|||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 445668999999999999865 7999999999743 35678999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
-.|+..+.++.... ++++.++..+.+..++||+||| ...=||||||+.|||++.+|.+|++|||+|-.+.. .-.
T Consensus 111 GAGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-TMA 184 (502)
T KOG0574|consen 111 GAGSISDIMRARRK--PLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-TMA 184 (502)
T ss_pred CCCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhh-hHH
Confidence 99999999987654 4999999999999999999999 66779999999999999999999999999976542 122
Q ss_pred CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhh
Q 001274 963 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSA 1042 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1109)
...++.||+.|||||++..-.|+.++||||+|+...||..|++||.+..+- +..+. +|. ......
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-------RAIFM--IPT------~PPPTF 249 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-------RAIFM--IPT------KPPPTF 249 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-------ceeEe--ccC------CCCCCC
Confidence 335678999999999999999999999999999999999999999864421 11111 010 001112
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1043 KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1043 ~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
+.+.+....|.+++..|+-..|++|.|+.++++|-
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 23445566799999999999999999999998763
No 167
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-34 Score=351.43 Aligned_cols=260 Identities=21% Similarity=0.340 Sum_probs=201.6
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--CceE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSNL 876 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 876 (1109)
..++|.+.++||+|+||+||+|++. +++.||+|++............+..|+.++++++|||||+++++|... ...|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 3468999999999999999999865 577899999876544445567789999999999999999999988654 4578
Q ss_pred EEEEeccCCCHHHHhccCCC-CCCCChHHHHHHHHHHHHHHHHHhhcC----CCCeEecCCCCCceeeCC----------
Q 001274 877 LLYEYMENGSLGEQLHGNKQ-TCLLDWDARYRIALGAAEGLCYLHYDC----RPHIIHRDIKSNNILLDE---------- 941 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~Dlkp~NIll~~---------- 941 (1109)
+||||+++|+|.+++..... ...+++..++.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 99999999999999975321 124899999999999999999999431 146999999999999964
Q ss_pred -------CCceEEeeccccccccCCCCCCccccccccceeccccccC--CCCCccchhHHHHHHHHHHHhCCCCCCCccc
Q 001274 942 -------EFQAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSFGVVLLELITGKSPVQSLEL 1012 (1109)
Q Consensus 942 -------~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvll~elltg~~pf~~~~~ 1012 (1109)
.+.+||+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~- 247 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN- 247 (1021)
T ss_pred cccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-
Confidence 345899999999865421 22234578999999999864 458899999999999999999999997532
Q ss_pred CCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1013 GGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.....+....... ... .......+.++|..||+.+|++||++.|++.+-+
T Consensus 248 --~~~qli~~lk~~p--~lp------------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 248 --NFSQLISELKRGP--DLP------------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred --cHHHHHHHHhcCC--CCC------------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 2222222211111 000 0011235779999999999999999999997643
No 168
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.9e-35 Score=332.41 Aligned_cols=259 Identities=22% Similarity=0.257 Sum_probs=197.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+.+|+.+++.++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36888999999999999999965 68999999986421 12223456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 99999999999976433 2889999999999999999999 789999999999999999999999999999765432
Q ss_pred CCCCccccccccceeccccccC-----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+.......... ....
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~----~~~~~~~i~~~~~-~~~~- 229 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES----LVETYGKIMNHKE-HFQF- 229 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC----HHHHHHHHHcCCC-cccC-
Confidence 2222233568999999999863 457889999999999999999999997532 2222222111110 0000
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCC--CCCCCCCHHHHHHHHH
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSST--SPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~--dP~~RPt~~evl~~L~ 1078 (1109)
... .......+.+++.+|+.. ++..||++.+++++-+
T Consensus 230 ~~~-------~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 230 PPD-------VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred CCc-------cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 000 001123456777776654 3444889999998854
No 169
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.8e-34 Score=324.23 Aligned_cols=258 Identities=24% Similarity=0.417 Sum_probs=205.2
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCc
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 874 (1109)
++|.+.+.||+|+||.||+|... .+..||||+++... .....+.+.+|+++++++ +|+||+++++++...+.
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 57889999999999999999742 34579999886432 223456788999999999 79999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++||||+++|+|.++++..... .+++.++..++.|++.|++||| +.+++|+||||+||+++.++.++++|||.++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~-~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRES-FLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999999999999999764432 3799999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCch
Q 001274 955 LIDLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSE 1032 (1109)
Q Consensus 955 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1109)
........ ......++..|+|||++.+..++.++||||+||++|||++ |+.||............+.. .....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~- 264 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE----GYRMA- 264 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc----CCcCC-
Confidence 65422111 1122345778999999999999999999999999999998 99998754432222222211 11000
Q ss_pred hhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1033 LFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
. .......+.+++.+|++.+|++||++.|+++.|.+.
T Consensus 265 -~----------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 265 -Q----------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -C----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 001123688999999999999999999999999875
No 170
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.6e-34 Score=319.88 Aligned_cols=257 Identities=24% Similarity=0.354 Sum_probs=198.2
Q ss_pred CCCCceEecCCcceEEEEEecC-Cc--EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC------Cc
Q 001274 804 FSEGAVIGRGACGTVYKATLAN-GE--VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ------DS 874 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 874 (1109)
|.++++||+|+||.||+|++.+ ++ .||+|.++.........+.+.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999998754 33 689998875544445567889999999999999999999987532 24
Q ss_pred eEEEEEeccCCCHHHHhccCC---CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 875 NLLLYEYMENGSLGEQLHGNK---QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
.++||||+++|+|.+++.... ....+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 589999999999998874321 1234889999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCC
Q 001274 952 LAKLIDLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVP 1029 (1109)
Q Consensus 952 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 1029 (1109)
+++........ ......+++.|+|||+..+..++.++||||||+++|||++ |+.||..... .+...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~~~~~~~~~ 233 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN----SEIYDYLRQGNRL 233 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHHcCCCC
Confidence 99865422111 1122345778999999999999999999999999999999 8889875321 1111111111100
Q ss_pred CchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1030 TSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
. ........+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 234 -~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 234 -K------------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -C------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 0011223578999999999999999999999999875
No 171
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-34 Score=322.08 Aligned_cols=254 Identities=24% Similarity=0.364 Sum_probs=203.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.+|++.+.||+|+||.||+|+.. +++.||+|.+..... ...+.+.+|+.+++.++|+||+++++.+..++..++|||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 57888999999999999999864 689999999875432 234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++.... +++.++..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.+......
T Consensus 98 ~~~~~~L~~~~~~~~----~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~- 169 (296)
T cd06654 98 YLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE- 169 (296)
T ss_pred ccCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccc-
Confidence 999999999986532 788999999999999999999 779999999999999999999999999998765321
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
........+++.|+|||++.+..++.++|||||||++|+|++|+.||........ .........+...
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~-------- 237 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----LYLIATNGTPELQ-------- 237 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh----HHHHhcCCCCCCC--------
Confidence 1122334688899999999988899999999999999999999999975332111 1111111110000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
........+.+++.+||..+|++||++.+++++-+..
T Consensus 238 ---~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~ 274 (296)
T cd06654 238 ---NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274 (296)
T ss_pred ---CccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhh
Confidence 0111224577899999999999999999999875443
No 172
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.9e-37 Score=339.17 Aligned_cols=365 Identities=30% Similarity=0.415 Sum_probs=246.8
Q ss_pred ccchhhhccccccc-ccCchhhhccccccceecccccccCCCCCCccccccccceeeeeccceecCchhhhccCccceEE
Q 001274 216 EGLEVLGLAQNSLE-GFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPKELGKLSRLKKLY 294 (1109)
Q Consensus 216 ~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 294 (1109)
+-.+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.+++|++|.+++|++. .+-..++.|+.|+.+.
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 33445677777776 467888888888888888888887 78888888888888888888877 5566777888888888
Q ss_pred eeccccc-CccCcccCCCCcCcEEEccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCccc
Q 001274 295 VYTNELN-GTIPHELGNCTSAVEIDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLT 373 (1109)
Q Consensus 295 l~~n~l~-~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 373 (1109)
+..|++. ..+|..+..+..|+.||||+|+++ ..|..+..-+++-.|+|++|+|..+.-.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~------------------- 144 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNS------------------- 144 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCch-------------------
Confidence 8888875 456778888888888888888887 3444444444444444444444433333
Q ss_pred CCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCCccc-cCCCCCCC
Q 001274 374 GTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRL-SGNIPPGL 452 (1109)
Q Consensus 374 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l-~~~~~~~~ 452 (1109)
.|.+++.|-.|+|++|++. .+|+.+..+.+|++|+|++|.+...--..+..+++|+.|++++.+= ...+|.++
T Consensus 145 -----lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsl 218 (1255)
T KOG0444|consen 145 -----LFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSL 218 (1255)
T ss_pred -----HHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCch
Confidence 3444444444455555544 4444455555555555555554433333344455556666655432 23466677
Q ss_pred ccccccceeecccccccccCCccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccE
Q 001274 453 KTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVT 532 (1109)
Q Consensus 453 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 532 (1109)
..+.+|..++|+.|.+. +.|+.+.++.+|+.|+||+|+|+.+ .-..+...+|++|+||.|+++ ..|+.++.+++|+.
T Consensus 219 d~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k 295 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK 295 (1255)
T ss_pred hhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeee-eccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH
Confidence 77777777777777776 6677777777777777777777743 334555667777777777777 57777777777777
Q ss_pred EecccCccc-ccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcccceeeccCcc
Q 001274 533 FNISSNSLS-GTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNI 611 (1109)
Q Consensus 533 L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 611 (1109)
|++.+|+++ .-+|+.++.+.+|+.+..++|.+. ..|+.++.+..|+.|.|+.|++. .+|+.+.-|+.|+.||+..|+
T Consensus 296 Ly~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 296 LYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred HHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 777777775 236777777777777777777776 67777777777777777777776 567777777777777777775
Q ss_pred cc
Q 001274 612 FS 613 (1109)
Q Consensus 612 l~ 613 (1109)
-.
T Consensus 374 nL 375 (1255)
T KOG0444|consen 374 NL 375 (1255)
T ss_pred Cc
Confidence 43
No 173
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=9.2e-35 Score=329.59 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=197.0
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCceEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 879 (1109)
+|+..+.||+|+||+||+|+.. +++.||+|++..... .....+.+..|..++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999865 689999999974321 2233456778888988885 578888999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... +++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 99999999999876543 899999999999999999999 789999999999999999999999999998754321
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.+... ...............
T Consensus 155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~----~~~~~~i~~~~~~~p-------- 221 (323)
T cd05615 155 -GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE----DELFQSIMEHNVSYP-------- 221 (323)
T ss_pred -CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCCCC--------
Confidence 1222345689999999999999999999999999999999999999975432 222222221111110
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTM-----REVIAM 1076 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~-----~evl~~ 1076 (1109)
......+.+++.+|++.+|.+|++. +++.++
T Consensus 222 ------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 222 ------KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred ------ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 0112356789999999999999984 556555
No 174
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.7e-34 Score=317.22 Aligned_cols=261 Identities=23% Similarity=0.377 Sum_probs=208.0
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||.||+|+. .+++.||||.+..... ......++.+|+++++.++|+||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999985 4789999998864332 2234467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 880 EYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
||+++++|.+++.... ....+++..+..++.||++|+.||| +.+++|+||||+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999886422 1234899999999999999999999 78999999999999999999999999999876542
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
. ........++..|+|||++.+..++.++||||+|+++|||++|..||..... ...+..+.......+..
T Consensus 159 ~-~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~------- 228 (267)
T cd08229 159 K-TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKIEQCDYPPL------- 228 (267)
T ss_pred C-CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc--hHHHHhhhhhcCCCCCC-------
Confidence 2 1222345688999999999998999999999999999999999999864321 12222221111111000
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
........+.+++.+||+.+|++||||.+|++.+++.
T Consensus 229 -----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 229 -----PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred -----CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 0111234688999999999999999999999998765
No 175
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.6e-34 Score=319.05 Aligned_cols=257 Identities=25% Similarity=0.317 Sum_probs=202.8
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
|+..+.||+|+||+||+|.+. +++.||+|.+...... ......+.+|+.++++++|++++++++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999865 6899999998644222 22235577899999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 82 ~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 155 (285)
T cd05630 82 MNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-- 155 (285)
T ss_pred cCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC--
Confidence 999999998865432 23899999999999999999999 789999999999999999999999999998764321
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||......... +......... ...+
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~~~---~~~~------- 224 (285)
T cd05630 156 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEV---QEEY------- 224 (285)
T ss_pred ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhhhh---hhhc-------
Confidence 2223447899999999999999999999999999999999999999854321111 1111111100 0000
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHHHHh
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPT-----MREVIAMMIDA 1080 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~~~ 1080 (1109)
.......+.+++.+||+.||++||| +.|++++-+..
T Consensus 225 ---~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~ 265 (285)
T cd05630 225 ---SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK 265 (285)
T ss_pred ---CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence 1111234679999999999999999 89999876654
No 176
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.6e-35 Score=342.66 Aligned_cols=265 Identities=22% Similarity=0.281 Sum_probs=194.6
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC-------
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ------- 872 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 872 (1109)
.++|++.++||+|+||+||+|+.. +++.||||++... .....+|+.+++.++|+||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC------cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 357999999999999999999864 6899999988532 12345799999999999999999887432
Q ss_pred -CceEEEEEeccCCCHHHHhccC-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEee
Q 001274 873 -DSNLLLYEYMENGSLGEQLHGN-KQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-QAHVGD 949 (1109)
Q Consensus 873 -~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~D 949 (1109)
...++||||+++ ++.+++... .....+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeec
Confidence 135689999975 777766432 12234899999999999999999999 78999999999999998665 799999
Q ss_pred ccccccccCCCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC
Q 001274 950 FGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV 1028 (1109)
Q Consensus 950 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 1028 (1109)
||+|+.... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+......+...++.. . .
T Consensus 215 FGla~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~-~--~ 289 (440)
T PTZ00036 215 FGSAKNLLA--GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVL-G--T 289 (440)
T ss_pred cccchhccC--CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-C--C
Confidence 999986542 2223345789999999998764 68999999999999999999999997643222222222110 0 0
Q ss_pred CCchhhh-----------hhcc---hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1029 PTSELFD-----------KRLD---LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1029 ~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
+..+.+. +... ............+.+++.+||+.||++|||+.|++++-+..
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~ 355 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFD 355 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHH
Confidence 0000000 0000 00000111234678999999999999999999999886643
No 177
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.2e-35 Score=332.97 Aligned_cols=239 Identities=23% Similarity=0.296 Sum_probs=189.9
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHH-HhccCCCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEIS-TLGKIRHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|+.. +|+.||+|++..... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 689999999974421 1223345556655 46778999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|..++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~-~~~~~ 153 (325)
T cd05604 81 GELFFHLQRERS---FPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA-QSDTT 153 (325)
T ss_pred CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC-CCCCc
Confidence 999998876543 899999999999999999999 78999999999999999999999999999875321 12223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.............
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~----~~~~~~~~~~~~~~~~------------- 216 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD----VAEMYDNILHKPLVLR------------- 216 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC----HHHHHHHHHcCCccCC-------------
Confidence 45679999999999999999999999999999999999999997532 2222222222211110
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMR 1071 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~ 1071 (1109)
......+.+++.+|++.+|++||+++
T Consensus 217 -~~~~~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 217 -PGASLTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred -CCCCHHHHHHHHHHhccCHHhcCCCC
Confidence 01123567899999999999999875
No 178
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.2e-34 Score=320.31 Aligned_cols=261 Identities=22% Similarity=0.368 Sum_probs=206.7
Q ss_pred hcCCCCCceEecCCcceEEEEEecC-----CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe-CCc
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLAN-----GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH-QDS 874 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 874 (1109)
.++|++.+.||+|+||.||+|.+.+ +..||+|+++.. ......+.+.+|+.++++++|+||+++++++.. +..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 4678889999999999999998765 688999988632 233445778899999999999999999998776 467
Q ss_pred eEEEEEeccCCCHHHHhccCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQT-----CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGD 949 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 949 (1109)
.++++||+++++|.+++...... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECC
Confidence 88999999999999998764322 34899999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhcc
Q 001274 950 FGLAKLIDLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEM 1027 (1109)
Q Consensus 950 FG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 1027 (1109)
||+++.+...... ......++..|+|||++.+..++.++||||+|+++||+++ |+.||..... .....++.. .
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~----~ 235 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-FEMAAYLKD----G 235 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-HHHHHHHHc----C
Confidence 9999865322211 1122345778999999998889999999999999999999 9999975321 111122111 1
Q ss_pred CCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1028 VPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
..... .......+.+++.+||+.||++|||+.++++.|..+..
T Consensus 236 ~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 236 YRLAQ------------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCCC------------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11000 11122457899999999999999999999999988764
No 179
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3e-34 Score=318.92 Aligned_cols=253 Identities=25% Similarity=0.389 Sum_probs=201.4
Q ss_pred CCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..++||+|+||.||+|++ .+++.||+|++.... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 577889999999999999986 468899999986432 233456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|..+. .+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 9999997652 2678889999999999999999 789999999999999999999999999999865422
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCc---HHHHHHHhhhccCCCchhhhhhc
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGD---LVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||........ .............+. .
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 220 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV-------L 220 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC-------C
Confidence 22345789999999999999999999999999999999999999975432111 111111111111000 0
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
. .......+.+++.+|++.+|++||+++|++++.+...
T Consensus 221 ~-----~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 221 P-----VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred C-----CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence 0 0111235779999999999999999999998865543
No 180
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.6e-35 Score=322.77 Aligned_cols=255 Identities=32% Similarity=0.481 Sum_probs=201.8
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
|++++.||+|+||+||+|+.. +++.||+|++..............+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 566789999999999999976 5678999999865433333334456999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
++++|.+++.... .+++..+..++.|+++||+||| +.+++|+||||+||+++.++.++|+|||.+.... ....
T Consensus 81 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNE 153 (260)
T ss_dssp TTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTS
T ss_pred ccccccccccccc---cccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-cccc
Confidence 9999999998333 3899999999999999999999 6799999999999999999999999999997642 1233
Q ss_pred Cccccccccceecccccc-CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 963 SMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
......++..|+|||++. +..++.++||||+|+++|+|++|..||...... +.............+ . .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~-----~-----~ 222 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-DQLEIIEKILKRPLP-----S-----S 222 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-HHHHHHHHHHHTHHH-----H-----H
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccch-hhhhhhhhccccccc-----c-----c
Confidence 345567899999999998 888999999999999999999999999864111 111111111111100 0 0
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
..........+.+++.+||+.||++||++.+++++
T Consensus 223 ~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 223 SQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp TTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000112578899999999999999999999875
No 181
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.7e-35 Score=331.90 Aligned_cols=240 Identities=23% Similarity=0.269 Sum_probs=188.7
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHH-HhccCCCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEIS-TLGKIRHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|++. +++.||+|++...... ......+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999875 5788999999743211 112234444544 56788999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|.+++..... +++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~~~~---~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~-~~~~~ 153 (325)
T cd05602 81 GELFYHLQRERC---FLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-HNGTT 153 (325)
T ss_pred CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCccccc-CCCCc
Confidence 999999976543 788888999999999999999 78999999999999999999999999999975431 12223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+............
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~i~~~~~~~-------------- 215 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN----TAEMYDNILNKPLQL-------------- 215 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC----HHHHHHHHHhCCcCC--------------
Confidence 45679999999999999999999999999999999999999997533 222222221111110
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMRE 1072 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~e 1072 (1109)
.......+.+++.+|++.||.+||++.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 0111235678999999999999998774
No 182
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.2e-34 Score=320.72 Aligned_cols=259 Identities=26% Similarity=0.404 Sum_probs=202.9
Q ss_pred CCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
+|++.+.||+|+||.||+|+.. ....||+|.+.... .......+.+|+++++.++||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 4778899999999999999753 23568888876332 2234567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhccCC---------------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 001274 877 LLYEYMENGSLGEQLHGNK---------------------QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSN 935 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~ 935 (1109)
+||||+++|+|.+++.... ....+++..+..++.|++.|++||| +.+++||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhh
Confidence 9999999999999986421 1124788999999999999999999 789999999999
Q ss_pred ceeeCCCCceEEeeccccccccCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccC
Q 001274 936 NILLDEEFQAHVGDFGLAKLIDLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELG 1013 (1109)
Q Consensus 936 NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~ 1013 (1109)
||++++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||.+...
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~- 235 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP- 235 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 999999999999999999865322111 1122345678999999988889999999999999999999 9999875321
Q ss_pred CcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1014 GDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
......+.. ..... ........+.+++.+||+.+|++||+++++++.|+++..
T Consensus 236 ~~~~~~~~~----~~~~~------------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 ERLFNLLKT----GYRME------------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHHhC----CCCCC------------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 111222111 11000 011122457799999999999999999999999998764
No 183
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.3e-35 Score=332.46 Aligned_cols=244 Identities=25% Similarity=0.311 Sum_probs=191.4
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHH-HhccCCCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEIS-TLGKIRHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
++||+|+||+||+|++. +++.||+|++..... .......+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 688999999864321 1122344555554 57889999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|..++..... +++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~ 153 (321)
T cd05603 81 GELFFHLQRERC---FLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EETT 153 (321)
T ss_pred CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCcc
Confidence 999988875443 788899999999999999999 789999999999999999999999999998753221 2223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...............
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~i~~~~~~~-------------- 215 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD----VSQMYDNILHKPLQL-------------- 215 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC----HHHHHHHHhcCCCCC--------------
Confidence 44578999999999999999999999999999999999999997532 222222222221111
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHH----HHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMR----EVIAM 1076 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~----evl~~ 1076 (1109)
.......+.+++.+|++.||.+||++. +++++
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 111123577899999999999999764 55544
No 184
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3e-34 Score=320.38 Aligned_cols=267 Identities=22% Similarity=0.371 Sum_probs=203.0
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|+..+.||+|+||.||+|+++ +++.||+|++..........+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999976 68999999987544333344668899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|++++++..+...... +++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNPRG---VPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCCCC---CCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 9999888887755432 899999999999999999999 7799999999999999999999999999998764322
Q ss_pred CCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC-------ch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT-------SE 1032 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~ 1032 (1109)
.......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.+....+.... +........+. ..
T Consensus 155 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 155 -DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYL-IRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred -ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCChHHhhhccccc
Confidence 12234467889999999876 5588999999999999999999999975432211111 11111110000 00
Q ss_pred hh----hhhcchh---hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1033 LF----DKRLDLS---AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1033 ~~----~~~~~~~---~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.+ .+..... ..........+.+++.+||+.+|++||++.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00 0000000 00001123567899999999999999999999875
No 185
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.5e-34 Score=313.32 Aligned_cols=251 Identities=24% Similarity=0.448 Sum_probs=202.3
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
.+|++.+.||+|+||.||+|.+.+++.+|+|+++... .....+.+|++++++++||+++++++++......++||||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA---MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC---CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 4677889999999999999998778899999886332 2345789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... .+++..+..++.+++.|++||| +.+++||||||+||+++.++.++|+|||.++.......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 81 MEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 999999999976543 2789999999999999999999 77999999999999999999999999999976542222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++.+|+|||++.++.++.++||||+|+++|||++ |+.||.... .............. ..+..
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~----~~~~~~~~~~~~~~----~~~~~-- 225 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS----NSEVVETINAGFRL----YKPRL-- 225 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC----HHHHHHHHhCCCCC----CCCCC--
Confidence 22223345678999999998899999999999999999998 999987432 12222221111000 00000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
....+.+++.+||+.+|++||++.+++++|
T Consensus 226 -------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 -------ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -------CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 124688999999999999999999999886
No 186
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.4e-34 Score=329.06 Aligned_cols=262 Identities=26% Similarity=0.417 Sum_probs=202.6
Q ss_pred cCCCCCceEecCCcceEEEEEe------cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC-C
Q 001274 802 GNFSEGAVIGRGACGTVYKATL------ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ-D 873 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 873 (1109)
++|++.+.||+|+||+||+|++ .+++.||||+++... .......+.+|+.++.++ +|+||+++++++... .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 5799999999999999999973 247889999997432 223456788999999999 689999999988654 4
Q ss_pred ceEEEEEeccCCCHHHHhccCCC---------------------------------------------------------
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQ--------------------------------------------------------- 896 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 896 (1109)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 57899999999999999864321
Q ss_pred -------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC-CCccccc
Q 001274 897 -------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS-KSMSAIA 968 (1109)
Q Consensus 897 -------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~ 968 (1109)
...+++..+..++.||++|++||| +.+|+||||||+||+++.++.+||+|||+++....... .......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 113678888999999999999999 78999999999999999999999999999986532211 1112234
Q ss_pred cccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHH
Q 001274 969 GSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVE 1047 (1109)
Q Consensus 969 gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
++..|+|||++.+..++.++||||||+++|||++ |..||............+....... ... .
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~--------------~ 306 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--APD--------------Y 306 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC--CCC--------------C
Confidence 5678999999999999999999999999999997 9999875432222211111110000 000 0
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1048 EMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1048 ~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
....+.+++.+||+.+|++||++.|++++|+.+.+.
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 113578999999999999999999999999988753
No 187
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.4e-34 Score=315.03 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=203.7
Q ss_pred hcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.++|++.++||+|+||.||+|.+.++..||+|+++.. ....+.+.+|++++++++|+||+++++++.. ...+++||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 3678899999999999999999877888999988632 2245678899999999999999999999887 77899999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 81 FMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred eCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 9999999999976432 23788999999999999999999 7799999999999999999999999999997654322
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
........++..|+|||++.+..++.++|||||||++|++++ |+.||..... ......+.. .....
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-~~~~~~~~~----~~~~~-------- 223 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-PEVIRALER----GYRMP-------- 223 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHhC----CCCCC--------
Confidence 222223345678999999998889999999999999999999 8999875321 111121111 11100
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
........+.+++.+||+.+|++||++.++.+.|..
T Consensus 224 ----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 ----RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 011122457899999999999999999999998864
No 188
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.3e-34 Score=322.50 Aligned_cols=260 Identities=25% Similarity=0.415 Sum_probs=204.7
Q ss_pred hcCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCC
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQD 873 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 873 (1109)
.++|+..+.||+|+||.||+|... ....||+|.+.... .......+.+|+++++++ +|+||+++++++..++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 357888899999999999999864 23679999887432 223446688999999999 8999999999999999
Q ss_pred ceEEEEEeccCCCHHHHhccCC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC
Q 001274 874 SNLLLYEYMENGSLGEQLHGNK-------------QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD 940 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~ 940 (1109)
..++||||+++|+|.++++... ....+++..+..++.|++.|++||| +.+|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEc
Confidence 9999999999999999996431 1234889999999999999999999 78999999999999999
Q ss_pred CCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHH
Q 001274 941 EEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVT 1018 (1109)
Q Consensus 941 ~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~ 1018 (1109)
.++.+|++|||.++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~ 245 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-ELFK 245 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-HHHH
Confidence 999999999999986543221 11122345678999999998899999999999999999998 99998753311 1111
Q ss_pred HHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1019 WVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.+. .... .. ........+.+++.+||+.+|++||||.|+++.|+.+.
T Consensus 246 ~~~---~~~~-~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 246 LLK---EGYR-ME------------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHH---cCCc-CC------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111 1110 00 01112235779999999999999999999999998764
No 189
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.3e-34 Score=313.96 Aligned_cols=256 Identities=25% Similarity=0.436 Sum_probs=203.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CC---cEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NG---EVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
.+|+..+.||+|+||.||+|+.+ ++ ..||+|+++... .....+.+.+|++++++++|+|++++.+++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 46778899999999999999865 23 378999886432 23345678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||+++++|.+++..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999999976443 3899999999999999999999 7799999999999999999999999999998654
Q ss_pred CCCCCCc--cccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 958 LPYSKSM--SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 958 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
....... .....+..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..+...... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~----~~~~~~i~~~~-~~~~-- 231 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN----HEVMKAINDGF-RLPA-- 231 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH----HHHHHHHhcCC-CCCC--
Confidence 2221111 11223567999999998889999999999999999998 9999975331 22222211111 1000
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..+....+.+++.+||+.+|++||++.+|++.|.++
T Consensus 232 ----------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 232 ----------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111234578999999999999999999999999875
No 190
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.1e-34 Score=322.41 Aligned_cols=254 Identities=24% Similarity=0.340 Sum_probs=201.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+.|++.++||+|+||.||+|++. +++.||+|++... .....+.+.+|+++++.++|+||+++++++..+...++|||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 56888999999999999999975 5889999998643 23345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|..++..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||.+......
T Consensus 90 ~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~- 163 (292)
T cd06644 90 FCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT- 163 (292)
T ss_pred cCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc-
Confidence 9999999988765433 3899999999999999999999 789999999999999999999999999998754321
Q ss_pred CCCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
........++..|+|||++. ...++.++|||||||++|||++|+.||..... ............+ . ..
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~-~-~~- 236 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP----MRVLLKIAKSEPP-T-LS- 236 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH----HHHHHHHhcCCCc-c-CC-
Confidence 12223456788999999885 34578899999999999999999999875331 1111111111110 0 00
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
........+.+++.+||+.+|++||++.+++++-+
T Consensus 237 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 271 (292)
T cd06644 237 --------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF 271 (292)
T ss_pred --------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 01112235778999999999999999999998744
No 191
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4e-34 Score=318.04 Aligned_cols=259 Identities=23% Similarity=0.411 Sum_probs=203.5
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCc----EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGE----VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
.+|+..++||+|+||+||+|++. +++ .||+|+++... .....+.+.+|+.+++.++|+||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 57888999999999999999853 444 48999886432 23345678899999999999999999999875 4578
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+++||+++|+|.++++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 85 l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 99999999999999976543 3899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 957 DLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 957 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
...... ......++..|+|||+..+..++.++|||||||++|||++ |..||..... .....++..... .+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~--~~~---- 232 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-REIPDLLEKGER--LPQ---- 232 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHCCCc--CCC----
Confidence 422111 1122345678999999999999999999999999999998 8999875321 122222221110 000
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
.......+.+++.+||+.||++||++.++++.+..+....
T Consensus 233 ----------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 233 ----------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0112235778999999999999999999999998776544
No 192
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.1e-34 Score=324.89 Aligned_cols=249 Identities=22% Similarity=0.263 Sum_probs=196.5
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||+||+|+.. +++.||+|+++..... ....+.+.+|+.++.++ +||+|+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 6789999999754221 22345678899998888 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|..++..... +++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~~~~---l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~-~~~~~ 153 (327)
T cd05617 81 GDLMFHMQRQRK---LPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG-PGDTT 153 (327)
T ss_pred CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccC-CCCce
Confidence 999998876543 899999999999999999999 78999999999999999999999999999875321 12223
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccC--CcHHHHHHHhhhcc-CCCchhhhhhcchh
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELG--GDLVTWVRRSIHEM-VPTSELFDKRLDLS 1041 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 1041 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....+.+....... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 222 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI----------- 222 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC-----------
Confidence 4567999999999999999999999999999999999999999753321 11222222222111 100
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCC------HHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPT------MREVIAMM 1077 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt------~~evl~~L 1077 (1109)
+......+.+++.+|++.||++|++ +.+++++-
T Consensus 223 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 223 ---PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred ---CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 0111234678999999999999998 46777664
No 193
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.5e-34 Score=320.45 Aligned_cols=263 Identities=22% Similarity=0.368 Sum_probs=207.1
Q ss_pred hcCCCCCceEecCCcceEEEEEec--------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEe
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA--------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYH 871 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 871 (1109)
.++|.+.+.||+|+||.||+|+.. ++..||+|.+... ......+.+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 367888999999999999999741 2457999988633 2233456788999999999 89999999999999
Q ss_pred CCceEEEEEeccCCCHHHHhccCCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCcee
Q 001274 872 QDSNLLLYEYMENGSLGEQLHGNKQ-------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNIL 938 (1109)
Q Consensus 872 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl 938 (1109)
.+..++||||+++|+|.+++..... ...+++..+..++.||++|+.||| +.+++||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEE
Confidence 9999999999999999999976421 123788899999999999999999 789999999999999
Q ss_pred eCCCCceEEeeccccccccCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcH
Q 001274 939 LDEEFQAHVGDFGLAKLIDLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDL 1016 (1109)
Q Consensus 939 l~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~ 1016 (1109)
++.++.+||+|||.++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..||.... .
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~----~ 245 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP----V 245 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC----H
Confidence 999999999999999866422211 1223345678999999999899999999999999999998 788886432 2
Q ss_pred HHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1017 VTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
.++........ ... ........+.+++.+||+.+|++||++.|+++.|.++....
T Consensus 246 ~~~~~~~~~~~-~~~------------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 246 EELFKLLKEGH-RMD------------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred HHHHHHHHcCC-cCC------------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 22222211111 000 01122346788999999999999999999999999887553
No 194
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.3e-34 Score=332.00 Aligned_cols=268 Identities=23% Similarity=0.307 Sum_probs=202.0
Q ss_pred HHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC-----
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ----- 872 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 872 (1109)
+..++|++.+.||+|+||+||+|++. +++.||||++..........+.+.+|++++++++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 44578999999999999999999864 688999999875433333446678999999999999999999987643
Q ss_pred -CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 873 -DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 873 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
...++++|++ +++|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCc
Confidence 3468999988 78998887543 2899999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1109)
+++.... ......+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+.........+... .. .+.
T Consensus 164 ~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~--~~~ 236 (343)
T cd07878 164 LARQADD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV-VG--TPS 236 (343)
T ss_pred cceecCC----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-hC--CCC
Confidence 9986542 2344578999999999877 56899999999999999999999999753321111111110 00 011
Q ss_pred chhhhhh-----------cchhhcc-----cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1031 SELFDKR-----------LDLSAKR-----TVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1031 ~~~~~~~-----------~~~~~~~-----~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.+..... +...... .......+.+++.+|++.||++|||+.|++++-+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 1111000 0000000 0001234679999999999999999999999876654
No 195
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.1e-34 Score=327.75 Aligned_cols=271 Identities=20% Similarity=0.221 Sum_probs=199.5
Q ss_pred CCceEecC--CcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 806 EGAVIGRG--ACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 806 ~~~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
+.++||+| +|++||+++.+ +|+.||+|++..........+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35689999 68899999864 7899999999755444444567788999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC-
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS- 961 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 961 (1109)
++|+|.+++...... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFMD-GMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 999999999654322 3889999999999999999999 77999999999999999999999999986543321110
Q ss_pred C-----CccccccccceeccccccC--CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-----C
Q 001274 962 K-----SMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-----P 1029 (1109)
Q Consensus 962 ~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-----~ 1029 (1109)
. ......++..|+|||++.+ ..++.++||||+||++|||++|+.||..................... +
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 0 0122346778999999876 45899999999999999999999999754322211111111100000 0
Q ss_pred Cchh--------hhhhcch---------------hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1030 TSEL--------FDKRLDL---------------SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1030 ~~~~--------~~~~~~~---------------~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..+. .+..... ...........+.+++.+||+.||++|||++|++++-+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~ 311 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence 0000 0000000 0001112234688999999999999999999999886553
No 196
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1e-34 Score=330.82 Aligned_cols=258 Identities=22% Similarity=0.244 Sum_probs=197.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.++||+|+||+||+++.+ +++.||+|++.... ........+.+|+.++..++|++|+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999875 57889999986321 11223345788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... .+++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999976433 2899999999999999999999 789999999999999999999999999999765322
Q ss_pred CCCCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 960 YSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+............ . +
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~----~~~~~~~i~~~~~~~-~-~ 229 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES----LVETYGKIMNHKERF-Q-F 229 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC----HHHHHHHHhCCCccc-c-C
Confidence 222223457999999999986 3468899999999999999999999997532 222222221111000 0 0
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCC--CCCCHHHHHHHH
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPL--NRPTMREVIAMM 1077 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~--~RPt~~evl~~L 1077 (1109)
.. ........+.+++.+|+..+|. .|++++|++++-
T Consensus 230 p~-------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 230 PA-------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred CC-------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence 00 0111223566788887755444 478999999884
No 197
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.7e-34 Score=319.71 Aligned_cols=253 Identities=26% Similarity=0.411 Sum_probs=198.8
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC-----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ----- 872 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----- 872 (1109)
+.+.|+..+.||+|+||+||+|+.. +++.||+|++.... .....+.+|+.+++++ +|+||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 4577888899999999999999865 68899999987432 2346788999999998 799999999998753
Q ss_pred -CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 873 -DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 873 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
...++||||+++++|.+++..... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCC
Confidence 357899999999999999976432 24889999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
+++..... ........|+..|+|||++. +..++.++||||+||++|||++|+.||...... ..... ....
T Consensus 157 ~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~---~~~~~-~~~~ 231 (272)
T cd06637 157 VSAQLDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM---RALFL-IPRN 231 (272)
T ss_pred Cceecccc-cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH---HHHHH-HhcC
Confidence 99865422 22234457889999999986 345888999999999999999999999743311 11111 0000
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
+..... .......+.+++.+||..+|++|||+.+++++
T Consensus 232 --~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 --PAPRLK----------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred --CCCCCC----------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 000000 01122357899999999999999999999875
No 198
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.2e-34 Score=321.59 Aligned_cols=261 Identities=22% Similarity=0.343 Sum_probs=203.9
Q ss_pred HhcCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 873 (1109)
..++|++.++||+|+||.||+|..+ .+..||+|.+.... .......+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4578999999999999999999743 24579999886332 2233456889999999999999999999999999
Q ss_pred ceEEEEEeccCCCHHHHhccCCC-------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQ-------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAH 946 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 946 (1109)
..++||||+++|+|.+++..... ....++..+..++.|++.|++||| +++|+||||||+||+++.++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEE
Confidence 99999999999999999975321 123567788899999999999999 78999999999999999999999
Q ss_pred EeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhh
Q 001274 947 VGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSI 1024 (1109)
Q Consensus 947 l~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~ 1024 (1109)
++|||+++....... .......++..|+|||++.++.++.++|||||||++|||++ |..||.+... .+......
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~----~~~~~~~~ 235 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN----EQVLKFVM 235 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHH
Confidence 999999985532211 11122345678999999999999999999999999999999 7889875331 22222211
Q ss_pred hccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1025 HEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
....... .......+.+++.+|++.+|++|||+.++++.+....
T Consensus 236 ~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 DGGYLDQ-------------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred cCCCCCC-------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1111000 0111246889999999999999999999999988754
No 199
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=7.5e-35 Score=331.51 Aligned_cols=258 Identities=21% Similarity=0.248 Sum_probs=199.0
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||+||+|+.+ +++.||+|++.... ........+.+|..++..++|++|+++++++...+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999865 68899999986422 11223455788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999976433 3889999999999999999999 789999999999999999999999999999866533
Q ss_pred CCCCccccccccceeccccccC-----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
.........||+.|+|||++.+ +.++.++||||+||++|||++|+.||.... ..+............ . +
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~----~~~~~~~i~~~~~~~-~-~ 229 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES----LVETYGKIMNHEERF-Q-F 229 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC----HHHHHHHHHcCCCcc-c-C
Confidence 2222234579999999999875 467899999999999999999999997532 222222211111000 0 0
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHH
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLN--RPTMREVIAMM 1077 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPt~~evl~~L 1077 (1109)
... .......+.+++.+|+..++.+ |+++++++++-
T Consensus 230 p~~-------~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~ 267 (331)
T cd05624 230 PSH-------ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA 267 (331)
T ss_pred CCc-------cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence 000 0111235678888888865544 56899998774
No 200
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.7e-34 Score=320.12 Aligned_cols=263 Identities=23% Similarity=0.360 Sum_probs=200.4
Q ss_pred cCCCCCceEecCCcceEEEEEecC---------------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN---------------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLY 866 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 866 (1109)
++|++.++||+|+||.||+|+..+ ...||+|+++... .......+.+|++++++++|+|+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 578899999999999999997542 2358999986432 233456789999999999999999999
Q ss_pred EEEEeCCceEEEEEeccCCCHHHHhccCCC---------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCce
Q 001274 867 GFCYHQDSNLLLYEYMENGSLGEQLHGNKQ---------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNI 937 (1109)
Q Consensus 867 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NI 937 (1109)
+++...+..++||||+++++|.+++..... ...+++..+.+++.|++.|++||| +.+++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhE
Confidence 999999999999999999999999865321 113688899999999999999999 78999999999999
Q ss_pred eeCCCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh--CCCCCCCcccCC
Q 001274 938 LLDEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT--GKSPVQSLELGG 1014 (1109)
Q Consensus 938 ll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt--g~~pf~~~~~~~ 1014 (1109)
+++.++.+||+|||+++....... .......++..|+|||++.++.++.++|||||||++|||++ |..||......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~- 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE- 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH-
Confidence 999999999999999976532211 11123345778999999998899999999999999999998 56677643321
Q ss_pred cHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1015 DLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.....+.......... .+.. ........+.+++.+||+.+|++||++.+|++.|.
T Consensus 240 ~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 QVIENTGEFFRNQGRQ--IYLS-------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHhhhhcccc--ccCC-------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1111111111111000 0000 00111246889999999999999999999999885
No 201
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.5e-34 Score=313.77 Aligned_cols=253 Identities=26% Similarity=0.447 Sum_probs=201.8
Q ss_pred CCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCC----cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEG----ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
+|+..+.||+|+||+||+|...+++.||||.++..... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 57889999999999999999888999999998754322 12235688899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+++++|.+++..... +++..+..++.|++.|++||| +.+|+|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFGP---LPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 999999999999976543 789999999999999999999 77999999999999999999999999999875421
Q ss_pred C-----CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 959 P-----YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 959 ~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
. .........++..|+|||++.+..++.++||||+|+++|||++|+.||........... +.. .....+ +.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~-~~~-~~~~~~--~~ 230 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY-IGA-HRGLMP--RL 230 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH-hhh-ccCCCC--CC
Confidence 1 11112345688999999999998999999999999999999999999975432111111 110 000100 00
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.+|++||++.+++++
T Consensus 231 -----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 231 -----------PDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred -----------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11122457789999999999999999999864
No 202
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.6e-34 Score=320.51 Aligned_cols=263 Identities=23% Similarity=0.368 Sum_probs=202.8
Q ss_pred cCCCCCceEecCCcceEEEEEecC-----------------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceee
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN-----------------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVK 864 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 864 (1109)
++|++.+.||+|+||.||+|+..+ +..||+|++.... .....+.+.+|++++++++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 578999999999999999997542 2458999887432 2234567889999999999999999
Q ss_pred EEEEEEeCCceEEEEEeccCCCHHHHhccCCC--------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCc
Q 001274 865 LYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQ--------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNN 936 (1109)
Q Consensus 865 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 936 (1109)
+++++..++..++||||+++++|.+++..... ...+++..+..++.|++.|++||| +.+++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 99999999999999999999999999976541 124899999999999999999999 7799999999999
Q ss_pred eeeCCCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh--CCCCCCCcccC
Q 001274 937 ILLDEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT--GKSPVQSLELG 1013 (1109)
Q Consensus 937 Ill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt--g~~pf~~~~~~ 1013 (1109)
|+++.++.++|+|||.++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999976532221 11223456788999999998899999999999999999998 67787643311
Q ss_pred CcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1014 GDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
............... ..... ........+.+++.+||+.||++|||+.|+++.|.
T Consensus 241 -~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 -QVIENAGHFFRDDGR-QIYLP--------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -HHHHHHHhccccccc-cccCC--------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111111111111000 00000 01112246889999999999999999999999885
No 203
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.7e-34 Score=323.10 Aligned_cols=265 Identities=24% Similarity=0.394 Sum_probs=205.0
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCc--EEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGE--VIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 877 (1109)
++|++.+.||+|+||.||+|+++ ++. .+|+|.++.. ........+.+|++++.++ +|+||+++++++...+..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 47888899999999999999864 454 4577766522 2233456788999999999 89999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 001274 878 LYEYMENGSLGEQLHGNKQ-------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQ 944 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 944 (1109)
||||+++++|.++++.... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCc
Confidence 9999999999999975431 124789999999999999999999 789999999999999999999
Q ss_pred eEEeeccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHh
Q 001274 945 AHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRS 1023 (1109)
Q Consensus 945 ~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~ 1023 (1109)
+||+|||+++.... ........++..|+|||++.+..++.++|||||||++|||+| |..||..... .+.....
T Consensus 163 ~kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~~ 236 (303)
T cd05088 163 AKIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----AELYEKL 236 (303)
T ss_pred EEeCccccCcccch--hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh----HHHHHHH
Confidence 99999999864321 111112234678999999988889999999999999999998 9999975331 1111111
Q ss_pred hhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccCCCCC
Q 001274 1024 IHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVSDYPS 1089 (1109)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 1089 (1109)
....... ........+.+++.+||+.+|++||++.+++++++++......+..
T Consensus 237 -~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~~~ 289 (303)
T cd05088 237 -PQGYRLE------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVN 289 (303)
T ss_pred -hcCCcCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhhhh
Confidence 1110000 0011123577999999999999999999999999988776654443
No 204
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.3e-34 Score=320.95 Aligned_cols=262 Identities=25% Similarity=0.380 Sum_probs=205.9
Q ss_pred cCCCCCceEecCCcceEEEEEec--------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA--------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ 872 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 872 (1109)
++|.+.+.||+|+||.||+|++. +...||+|.++... .......+.+|+++++++ +|+||+++++++...
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 57899999999999999999753 23569999987432 233445788899999999 799999999999999
Q ss_pred CceEEEEEeccCCCHHHHhccCCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQ-------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL 939 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 939 (1109)
+..++||||+++|+|.+++..... ...+++.++.+++.|++.|++||| +.+++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEE
Confidence 999999999999999999976432 124889999999999999999999 7799999999999999
Q ss_pred CCCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHH
Q 001274 940 DEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLV 1017 (1109)
Q Consensus 940 ~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~ 1017 (1109)
+.++.+||+|||.++....... .......++..|+|||++.+..++.++||||+||++|||++ |+.||.... ..
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~----~~ 249 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VE 249 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC----HH
Confidence 9999999999999876542111 11122234568999999998889999999999999999998 888886432 22
Q ss_pred HHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1018 TWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
+..... ....... ........+.+++.+||+.+|++||++.++++.|.++....
T Consensus 250 ~~~~~~-~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 250 ELFKLL-KEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHHH-HcCCCCC------------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 222211 1111000 01112246778999999999999999999999999987664
No 205
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.7e-34 Score=313.99 Aligned_cols=256 Identities=24% Similarity=0.398 Sum_probs=203.7
Q ss_pred cCCCCCceEecCCcceEEEEEec----CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA----NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
++|++.+.||+|+||.||+|++. .+..||+|.++... .....+.+.+|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 57888999999999999999863 23479999886432 23345688999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||+++++|.+++..... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||.++...
T Consensus 83 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 83 VTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999976543 3899999999999999999999 7899999999999999999999999999998664
Q ss_pred CCCCCCc--cccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 958 LPYSKSM--SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 958 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
....... ....++..|+|||++.+..++.++||||||+++||+++ |+.||...... .....+.. . ....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-~~~~~~~~---~-~~~~--- 229 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-DVIKAIEE---G-YRLP--- 229 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-HHHHHHhC---C-CcCC---
Confidence 3222111 12233568999999999899999999999999999887 99998754321 11122211 1 1000
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
........+.+++.+||+.+|++||+|.++++.|..+
T Consensus 230 ---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 230 ---------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ---------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0111224577999999999999999999999998764
No 206
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1e-33 Score=310.45 Aligned_cols=253 Identities=25% Similarity=0.391 Sum_probs=207.9
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..+.||+|+||.||.++.. +++.|++|++..........+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5788899999999999999854 688999999876654555667889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++..+..++.|+++|++||| +.+++||||+|+||+++.++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 999999999976532 24899999999999999999999 77999999999999999999999999999986643221
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
......+++.|+|||+..+..++.++||||+|+++|||++|+.||.... ..+..........+..
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~----~~~~~~~~~~~~~~~~---------- 221 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN----PLNLVVKIVQGNYTPV---------- 221 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHcCCCCCC----------
Confidence 2334568999999999998889999999999999999999999987432 2233332222221110
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.......+.+++.+||+.+|++||++.++++++
T Consensus 222 ---~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 222 ---VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ---ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 011123577899999999999999999999864
No 207
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1e-33 Score=310.43 Aligned_cols=249 Identities=22% Similarity=0.315 Sum_probs=194.9
Q ss_pred eEecCCcceEEEEEec---CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 809 VIGRGACGTVYKATLA---NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
.||+|+||.||+|.+. ++..||+|++.... .....+.+.+|+.++++++|+||+++++++. .+..++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 3899999999999753 35579999886432 2333467899999999999999999999875 45789999999999
Q ss_pred CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC--
Q 001274 886 SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS-- 963 (1109)
Q Consensus 886 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-- 963 (1109)
+|.+++..... .+++..+.+++.|++.|++||| +.+++||||||+||+++.++.+||+|||.++.........
T Consensus 80 ~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 80 PLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 99999975443 3899999999999999999999 7799999999999999999999999999998654222111
Q ss_pred ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhh
Q 001274 964 MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSA 1042 (1109)
Q Consensus 964 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1109)
.....++..|+|||++.+..++.++|||||||++||+++ |+.||..... .++.........+.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~~~~~~~~------------ 218 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG----PEVMSFIEQGKRLD------------ 218 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH----HHHHHHHHCCCCCC------------
Confidence 122234578999999988889999999999999999997 9999975431 12221111111000
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1043 KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1043 ~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.+......+.+++.+||..+|++||++.+|.+.|+...
T Consensus 219 -~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 219 -CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred -CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 01112346778999999999999999999999998653
No 208
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1e-33 Score=310.71 Aligned_cols=252 Identities=24% Similarity=0.367 Sum_probs=203.4
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC-CceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ-DSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e 880 (1109)
+|++.+.||+|++|.||+|+.+ +++.||+|++..........+.+.+|++++++++|+|++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999865 578999999976544444566788999999999999999999987644 45789999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... ..+++.++..++.+++.|++||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~- 155 (257)
T cd08223 81 FCEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ- 155 (257)
T ss_pred ccCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEeccc-
Confidence 9999999999976432 23899999999999999999999 789999999999999999999999999999866422
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
........+++.|+|||+..+..++.++||||+|+++|+|++|+.||.... .............+.
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~----~~~~~~~~~~~~~~~---------- 221 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD----MNSLVYRIIEGKLPP---------- 221 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHhcCCCC----------
Confidence 222334568899999999999999999999999999999999999987432 222222222221110
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
........+.+++.+||+.+|++||++.+++++
T Consensus 222 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 222 ---MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011222467899999999999999999999875
No 209
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-33 Score=323.12 Aligned_cols=262 Identities=25% Similarity=0.381 Sum_probs=205.8
Q ss_pred cCCCCCceEecCCcceEEEEEec--------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA--------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ 872 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 872 (1109)
.+|++.+.||+|+||.||+|+.. .+..||+|.++.. ......+.+.+|+++++++ +|+||+++++++...
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 57889999999999999999742 1236899988633 2233456789999999999 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHhccCCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQ-------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL 939 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 939 (1109)
+..++||||+++|+|.+++..... ...+++..+..++.|++.|++||| +.+++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEE
Confidence 999999999999999999975321 224788999999999999999999 7899999999999999
Q ss_pred CCCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHH
Q 001274 940 DEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLV 1017 (1109)
Q Consensus 940 ~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~ 1017 (1109)
+.++.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..||.+.. ..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~----~~ 243 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP----VE 243 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC----HH
Confidence 9999999999999986542211 11122334568999999999999999999999999999999 888887532 22
Q ss_pred HHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1018 TWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
++......... .. ........+.+++.+||+.+|++||++.|+++.|+.+....
T Consensus 244 ~~~~~~~~~~~-~~------------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 244 ELFKLLKEGHR-MD------------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHcCCC-CC------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 22222111111 00 01112245789999999999999999999999999887543
No 210
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.5e-34 Score=311.35 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=202.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.++||+|+||.||+++.. +++.||+|.++.... ....+.+.+|+.+++.++|+||+++++++..++..++||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 4778899999999999999865 688999999864322 23456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
++++++.+++..... ..+++..+..++.|++.|+.||| +.+++|+||||+||++++++.++++|||.+...... .
T Consensus 80 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~-~ 154 (255)
T cd08219 80 CDGGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP-G 154 (255)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-c
Confidence 999999998865432 23788999999999999999999 789999999999999999999999999999765422 1
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......++..|+|||++.+..++.++||||+|+++|+|++|+.||.... ............... .
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~---~------- 220 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS----WKNLILKVCQGSYKP---L------- 220 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC----HHHHHHHHhcCCCCC---C-------
Confidence 22234568889999999999899999999999999999999999997432 222222211111110 0
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.||++||++.+++..
T Consensus 221 ---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 ---PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 01112347789999999999999999999864
No 211
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.3e-34 Score=333.81 Aligned_cols=256 Identities=23% Similarity=0.295 Sum_probs=197.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|+..+.||+|+||+||+|+.+ +++.||+|++..... .......+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888899999999999999865 689999999974321 2233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++|+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKDT---LSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 99999999999976543 899999999999999999999 789999999999999999999999999998754211
Q ss_pred CC----------------------------------CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCC
Q 001274 960 YS----------------------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKS 1005 (1109)
Q Consensus 960 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~ 1005 (1109)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00 00123479999999999999999999999999999999999999
Q ss_pred CCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHHHH
Q 001274 1006 PVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPT---MREVIAMMI 1078 (1109)
Q Consensus 1006 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt---~~evl~~L~ 1078 (1109)
||..... ............ ...+.+.. .....+.+++.+++ .+|++|++ +.|+++|-+
T Consensus 235 Pf~~~~~----~~~~~~i~~~~~--~~~~p~~~--------~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~ 295 (360)
T cd05627 235 PFCSETP----QETYRKVMNWKE--TLVFPPEV--------PISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPF 295 (360)
T ss_pred CCCCCCH----HHHHHHHHcCCC--ceecCCCC--------CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCC
Confidence 9975432 111111111000 00000000 01124556777765 49999984 788887743
No 212
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.9e-34 Score=331.56 Aligned_cols=266 Identities=22% Similarity=0.235 Sum_probs=201.9
Q ss_pred hcCCCCCceEecCCcceEEEEEec---CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA---NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
..+|.+.+.||+|+||.||+|... .++.||+|.+.. .....+|++++++++||||+++++++......++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~-------~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG-------GKTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc-------cccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 468999999999999999999753 367899998752 1345689999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
|||++. ++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.++|+|||+++...
T Consensus 164 v~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRSG---PLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred EehhcC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 999995 68888885433 3899999999999999999999 7799999999999999999999999999997654
Q ss_pred CCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 958 LPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 958 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....... ..++............+..
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSS-SQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcH-HHHHHHHHHhccCccccCC
Confidence 3222 2223567999999999999999999999999999999999999999765432211 1111111100000000000
Q ss_pred ---------------hcch--hhcc---cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1037 ---------------RLDL--SAKR---TVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1037 ---------------~~~~--~~~~---~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.... .... .......+..++.+|++.||++||++.|++.+-+...
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 0000 0000 0011235678999999999999999999999976654
No 213
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.1e-34 Score=318.70 Aligned_cols=256 Identities=22% Similarity=0.331 Sum_probs=201.1
Q ss_pred CCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
+|++.++||+|+||+||+|++. +++.||+|+++.... ....+.+.+|+.+++.++||||+++++++...+..+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 4667789999999999999853 257899999974432 223466889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhccCC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC
Q 001274 877 LLYEYMENGSLGEQLHGNK-------------QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF 943 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~ 943 (1109)
+++||+++++|.+++.... ....+++..+.+++.|++.|++|+| +++|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCC
Confidence 9999999999999985321 1123788889999999999999999 78999999999999999999
Q ss_pred ceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHH
Q 001274 944 QAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVR 1021 (1109)
Q Consensus 944 ~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~ 1021 (1109)
.+||+|||+++....... .......+++.|+|||++.+..++.++||||+||++|||++ |..||.+.. ..++..
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~----~~~~~~ 237 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS----NQDVIE 237 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC----HHHHHH
Confidence 999999999886542221 11223446788999999998899999999999999999998 888887532 222222
Q ss_pred HhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1022 RSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
......... + .......+.+++.+||+.+|++||++++|++.|+.
T Consensus 238 ~i~~~~~~~---~----------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQVLP---C----------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCcCC---C----------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 222211110 0 11123457799999999999999999999998863
No 214
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7.7e-34 Score=316.62 Aligned_cols=265 Identities=28% Similarity=0.375 Sum_probs=199.5
Q ss_pred cCCCCCceEecCCcceEEEEEe-----cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--Cc
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-----ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DS 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 874 (1109)
.+|++.+.||+|+||+||+|+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 4788899999999999999974 257899999986432 23456788999999999999999999987543 45
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++||||+++|+|.+++..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccc
Confidence 7899999999999999976543 3899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCCC--ccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC---C
Q 001274 955 LIDLPYSKS--MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV---P 1029 (1109)
Q Consensus 955 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~ 1029 (1109)
......... .....++..|+|||+..+..++.++||||+||++|||++|..|+..... .+.+....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 231 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-----EFMRMMGNDKQGQMI 231 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch-----hhhhhcccccccccc
Confidence 664222111 1122344569999999988999999999999999999998877543210 11110000000 0
Q ss_pred Cc---hhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1030 TS---ELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1030 ~~---~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.. +....... ..........+.+++.+||+.+|++||||.|+++.|+.+
T Consensus 232 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 232 VYHLIELLKNNGR--LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hHHHHHHHhcCCc--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00 00000000 000112234688999999999999999999999999865
No 215
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=8.8e-34 Score=319.69 Aligned_cols=271 Identities=25% Similarity=0.371 Sum_probs=205.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|+||.||+|++. ++..||+|.+.... .......+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 36888999999999999999865 67889999886432 22334568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... +++..+..++.|+++||.|||+. .+++||||||+||+++.++.++|+|||++......
T Consensus 80 y~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 80 HMDGGSLDQVLKKAGR---IPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred ccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 9999999999976543 88999999999999999999932 48999999999999999999999999998754321
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC----------
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT---------- 1030 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---------- 1030 (1109)
......++..|+|||++.+..++.++||||||+++|||++|+.||..... .....+...........
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-hhHHHhhcCccccccccCCcccccCCC
Confidence 22345788999999999888899999999999999999999999864321 11111111100000000
Q ss_pred ---------chhhhhhcchh-hcc-cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1031 ---------SELFDKRLDLS-AKR-TVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1031 ---------~~~~~~~~~~~-~~~-~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
.+..+...... ... .......+.+++.+||+.+|++||++.+++++.+....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000000000 000 00123357899999999999999999999999876543
No 216
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6e-34 Score=339.27 Aligned_cols=267 Identities=19% Similarity=0.238 Sum_probs=195.2
Q ss_pred HHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC------CCceeeEEEEEEe
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR------HRNIVKLYGFCYH 871 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~ 871 (1109)
...++|++.++||+|+||+||+|++. .++.||||+++... .....+..|+++++.++ |.+++++++++..
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 34578999999999999999999865 58899999986321 12334556666666654 4568999998876
Q ss_pred C-CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCC-CCeEecCCCCCceeeCCCC------
Q 001274 872 Q-DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCR-PHIIHRDIKSNNILLDEEF------ 943 (1109)
Q Consensus 872 ~-~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIll~~~~------ 943 (1109)
. .+.++|||++ +++|.+++.+... +++..+..++.||+.||+||| . .+||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHGP---FSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccc
Confidence 5 4678999988 7789998876543 899999999999999999999 5 4999999999999998765
Q ss_pred ----------ceEEeeccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccC
Q 001274 944 ----------QAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELG 1013 (1109)
Q Consensus 944 ----------~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~ 1013 (1109)
.+||+|||.+.... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+....
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred cccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 49999999886432 2234568999999999999999999999999999999999999999754321
Q ss_pred CcHHHHHHHhhhccCCC-----------chhhhh------hcch---------hhcccHHHHHHHHHHHHhccCCCCCCC
Q 001274 1014 GDLVTWVRRSIHEMVPT-----------SELFDK------RLDL---------SAKRTVEEMTLFLKIALFCSSTSPLNR 1067 (1109)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~-----------~~~~~~------~~~~---------~~~~~~~~~~~~~~li~~cl~~dP~~R 1067 (1109)
+ ....+.... +..+. .+.+.. .... ...........+.+|+.+|+++||++|
T Consensus 352 ~-~~~~i~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 429 (467)
T PTZ00284 352 E-HLHLMEKTL-GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR 429 (467)
T ss_pred H-HHHHHHHHc-CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence 1 111111110 00000 000000 0000 000001123457899999999999999
Q ss_pred CCHHHHHHHHHHhh
Q 001274 1068 PTMREVIAMMIDAR 1081 (1109)
Q Consensus 1068 Pt~~evl~~L~~~~ 1081 (1109)
||++|+++|-+...
T Consensus 430 ~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 430 LNARQMTTHPYVLK 443 (467)
T ss_pred CCHHHHhcCccccc
Confidence 99999999876543
No 217
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.6e-34 Score=332.67 Aligned_cols=263 Identities=21% Similarity=0.233 Sum_probs=197.5
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.+|.+.+.||+|+||.||+|++. .++.||||... ...+.+|++++++++|+|||++++++...+..++|||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 47999999999999999999875 57889999643 2346789999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
++. ++|.+++..... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 241 ~~~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 241 KYR-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred ccC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 995 789888865433 3899999999999999999999 7899999999999999999999999999998654222
Q ss_pred CC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccC---C----cHHHHHHHhhhc--cCCC
Q 001274 961 SK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELG---G----DLVTWVRRSIHE--MVPT 1030 (1109)
Q Consensus 961 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~---~----~~~~~~~~~~~~--~~~~ 1030 (1109)
.. ......||+.|+|||++.+..++.++|||||||++|||++|..|+...... . .+...++..... ..+.
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 11 123457999999999999999999999999999999999988765432211 1 111222211100 0000
Q ss_pred ---chhhhhhc-------c--hh---hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1031 ---SELFDKRL-------D--LS---AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1031 ---~~~~~~~~-------~--~~---~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
........ . .. ..........+.+++.+||+.||.+|||+.|++++-+
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 00000000 0 00 0000011124778999999999999999999998754
No 218
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.5e-34 Score=318.19 Aligned_cols=254 Identities=24% Similarity=0.370 Sum_probs=204.5
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.+|++.+.||.|+||+||+|.. .+++.||+|.+..... ...+.+.+|+.+++.++|+||+++++++...+..++|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 4688899999999999999985 4789999999874432 235678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++... .+++.++..++.+++.|++||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 97 YLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred ecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 99999999998653 2899999999999999999999 7899999999999999999999999999987654221
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... +..........+...
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~----~~~~~~~~~~~~~~~-------- 236 (296)
T cd06655 170 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIATNGTPELQ-------- 236 (296)
T ss_pred -ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCcccC--------
Confidence 1223346888999999999988999999999999999999999999754321 111111111110000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
........+.+++.+||..||++||++.+++++=+..
T Consensus 237 ---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~ 273 (296)
T cd06655 237 ---NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (296)
T ss_pred ---CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 0111123577899999999999999999999886654
No 219
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.1e-33 Score=317.21 Aligned_cols=263 Identities=22% Similarity=0.371 Sum_probs=200.8
Q ss_pred cCCCCCceEecCCcceEEEEEec-----------------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceee
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-----------------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVK 864 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 864 (1109)
++|++.++||+|+||+||+++.. ++..||+|++.... .......+.+|+++++.++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcce
Confidence 46889999999999999998643 23468999886432 2234567899999999999999999
Q ss_pred EEEEEEeCCceEEEEEeccCCCHHHHhccCCCC--------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCc
Q 001274 865 LYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQT--------CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNN 936 (1109)
Q Consensus 865 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 936 (1109)
+++++...+..++||||+++|+|.+++...... ..+++..+..++.|++.|++||| +.+++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhe
Confidence 999999999999999999999999998764321 23778889999999999999999 7799999999999
Q ss_pred eeeCCCCceEEeeccccccccCCCCCC-ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh--CCCCCCCcccC
Q 001274 937 ILLDEEFQAHVGDFGLAKLIDLPYSKS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT--GKSPVQSLELG 1013 (1109)
Q Consensus 937 Ill~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt--g~~pf~~~~~~ 1013 (1109)
|+++.++.++++|||+++......... .....++..|+|||+..++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 999999999999999998653221111 122344678999999888899999999999999999998 77888654321
Q ss_pred CcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1014 GDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
... ............ . ... .........+.+++.+||+.||++||++.+|++.|.
T Consensus 241 ~~~-~~~~~~~~~~~~-~-~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 QVI-ENTGEFFRDQGR-Q-VYL-------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHH-HHHHHHHhhccc-c-ccC-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 111 111111111000 0 000 001112246889999999999999999999999885
No 220
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=8.8e-34 Score=311.17 Aligned_cols=249 Identities=26% Similarity=0.402 Sum_probs=196.8
Q ss_pred ceEecCCcceEEEEEec-C---CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEecc
Q 001274 808 AVIGRGACGTVYKATLA-N---GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
++||+|+||.||+|++. . +..||+|.+...... ...+.+.+|+++++.++|+||+++++++. .+..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 46999999999999753 2 268999998744332 35567899999999999999999999876 456799999999
Q ss_pred CCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC
Q 001274 884 NGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS 963 (1109)
Q Consensus 884 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 963 (1109)
+|+|.+++.... .+++..+..++.|++.|++||| ..+++||||||+||+++.++.+||+|||.++.........
T Consensus 79 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 79 LGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 999999998765 3899999999999999999999 7799999999999999999999999999998664322211
Q ss_pred c--cccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 964 M--SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 964 ~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
. ....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... .+..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-~~~~~~~~~~----~~~~--------- 218 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-AEVIAMLESG----ERLP--------- 218 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-HHHHHHHHcC----CcCC---------
Confidence 1 12223568999999999999999999999999999998 9999975431 1222222211 1000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
........+.+++.+||..+|++||++.++++.|++..
T Consensus 219 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 219 ---RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 01112246789999999999999999999999998753
No 221
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=9.8e-34 Score=311.78 Aligned_cols=254 Identities=30% Similarity=0.418 Sum_probs=203.8
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|+||.||+|+.. +++.+|+|++...... ..+.+.+|++++++++||||+++++++...+..+++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 57888999999999999999865 5788999999754322 45778999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~- 154 (262)
T cd06613 81 YCGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT- 154 (262)
T ss_pred CCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhh-
Confidence 9999999999876532 2899999999999999999999 779999999999999999999999999999765422
Q ss_pred CCCccccccccceeccccccCC---CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTM---KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
........++..|+|||++.+. .++.++||||+|+++|||++|+.||......... .............
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~---- 226 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL----FLISKSNFPPPKL---- 226 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhccCCCccc----
Confidence 1122345678899999998877 8899999999999999999999999754311111 1111111100000
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.........+.+++.+||..+|++|||+.+++.+
T Consensus 227 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 227 -----KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred -----cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0112233468899999999999999999999864
No 222
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.3e-33 Score=320.21 Aligned_cols=196 Identities=28% Similarity=0.468 Sum_probs=160.5
Q ss_pred CceEecCCcceEEEEEec---CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe--CCceEEEEEe
Q 001274 807 GAVIGRGACGTVYKATLA---NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH--QDSNLLLYEY 881 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 881 (1109)
+++||+|+||+||+|+.+ +++.||+|++.... ....+.+|++++++++||||+++++++.. +...++||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999864 46789999986332 23457789999999999999999998864 3457899999
Q ss_pred ccCCCHHHHhccCC------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee----CCCCceEEeecc
Q 001274 882 MENGSLGEQLHGNK------QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL----DEEFQAHVGDFG 951 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG 951 (1109)
+. ++|.+++.... ....+++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 95 58888775321 1124889999999999999999999 7799999999999999 466799999999
Q ss_pred ccccccCCCC--CCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCc
Q 001274 952 LAKLIDLPYS--KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSL 1010 (1109)
Q Consensus 952 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~ 1010 (1109)
+++....... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9987643221 122456789999999998874 5899999999999999999999999754
No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-33 Score=312.44 Aligned_cols=251 Identities=29% Similarity=0.427 Sum_probs=200.9
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcc-------hhHHHHHHHHHhccCCCCceeeEEEEEEeCCc
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGAT-------ADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 874 (1109)
+|.+.+.||+|+||.||+|... +++.||+|.+........ ..+.+.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778899999999999999864 688999998865432211 12568899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++||||+++++|.+++..... +++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGA---FEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccC---ccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 9999999999999999976543 888999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC-----CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCC
Q 001274 955 LIDLPYS-----KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVP 1029 (1109)
Q Consensus 955 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 1029 (1109)
....... .......++..|+|||++.+..++.++||||+|+++|+|++|+.||...... ..+........+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~ 230 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QAIFKIGENASP 230 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HHHHHHhccCCC
Confidence 6642111 1112345788999999999989999999999999999999999999753211 111111111000
Q ss_pred CchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1030 TSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
. ........+.+++.+||+.||.+||++.|++++
T Consensus 231 --~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 231 --E-----------IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred --c-----------CCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0 011123457799999999999999999999875
No 224
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-33 Score=313.03 Aligned_cols=258 Identities=26% Similarity=0.392 Sum_probs=203.2
Q ss_pred cCCCCCceEecCCcceEEEEEecC----CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN----GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
.+|.+.++||+|+||.||+|.+.+ ...||||...... .....+.+.+|++++++++|+||+++++++.+ +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 468888999999999999998643 3468999886432 23345678999999999999999999998875 55789
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||+++|+|.+++..... .+++..+..++.+++.|++||| +.+++||||||+||+++.++.++++|||.++...
T Consensus 84 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 84 VMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999999976543 3899999999999999999999 7799999999999999999999999999998654
Q ss_pred CCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
...........++..|+|||++....++.++||||||+++||+++ |..||...... .....+... ...+.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~--~~~~~------ 229 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-DVIGRIENG--ERLPM------ 229 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHcC--CcCCC------
Confidence 322111223334568999999988889999999999999999996 99999754321 111111110 00000
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
.......+.+++.+|+..+|++|||+.++++.|..+...
T Consensus 230 --------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 230 --------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111223678899999999999999999999999987654
No 225
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.8e-34 Score=317.88 Aligned_cols=256 Identities=24% Similarity=0.381 Sum_probs=202.9
Q ss_pred cCCCCCceEecCCcceEEEEEecC------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
++|++.+.||+|+||.||+|.+++ +..||+|.+.... .......+.+|+.+++.++|+||+++++++......
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 578889999999999999998642 3689999986332 223446788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCC-------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEe
Q 001274 876 LLLYEYMENGSLGEQLHGNKQ-------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVG 948 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 948 (1109)
++||||+++|+|.+++..... ...+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence 999999999999999965432 123688899999999999999999 7899999999999999999999999
Q ss_pred eccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhc
Q 001274 949 DFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 949 DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
|||.++....... .......++..|+|||++.+..++.++|||||||++||+++ |..||.+... ......+. ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~---~~ 237 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-EEVLKFVI---DG 237 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH-HHHHHHHh---cC
Confidence 9999986542221 12233456789999999988889999999999999999998 9999875321 11122121 11
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
..+ .. .......+.+++.+||+.+|++|||+.++++.|+
T Consensus 238 ~~~--~~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 238 GHL--DL-----------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCC--CC-----------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 100 00 0111346789999999999999999999999875
No 226
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.1e-33 Score=310.22 Aligned_cols=252 Identities=22% Similarity=0.352 Sum_probs=205.6
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..+.||+|+||+||+++.. +++.||+|++..........+++.+|+.++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5788899999999999999864 689999999975544444556889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~- 155 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV- 155 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-
Confidence 999999999876432 13788999999999999999999 7799999999999999999999999999998654221
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......+++.|+|||+..+..++.++|||||||++|+|++|+.||... ...+.+.....+..+..
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~----~~~~~~~~~~~~~~~~~---------- 221 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG----NMKNLVLKIIRGSYPPV---------- 221 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC----CHHHHHHHHhcCCCCCC----------
Confidence 1122345788999999999999999999999999999999999998742 23333333222222110
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.+|++||++.+|+++
T Consensus 222 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 222 ---SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ---cccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11123357899999999999999999999986
No 227
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.5e-33 Score=309.07 Aligned_cols=248 Identities=27% Similarity=0.418 Sum_probs=199.2
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe-CCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH-QDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 880 (1109)
.+|++.+.||+|+||.||+|..+ ++.||+|.++.. ...+.+.+|+.++++++|+|++++++++.. .+..++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 47888999999999999999875 788999988632 234678899999999999999999997654 456899999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||.++.....
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~- 155 (256)
T cd05082 81 YMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 155 (256)
T ss_pred CCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceecccc-
Confidence 9999999999976543 23789999999999999999999 779999999999999999999999999998754321
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.....++..|+|||++.+..++.++||||+||++|||++ |+.||.... ..+.......+.. . ..
T Consensus 156 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~----~~~~~~~~~~~~~-~-~~------ 220 (256)
T cd05082 156 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP----LKDVVPRVEKGYK-M-DA------ 220 (256)
T ss_pred ---CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHhcCCC-C-CC------
Confidence 122345678999999998889999999999999999998 999987432 2222222111110 0 00
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......+.+++.+||+.+|++|||+.+++++|..
T Consensus 221 -----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 221 -----PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred -----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 11123467799999999999999999999998865
No 228
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.8e-34 Score=315.99 Aligned_cols=253 Identities=27% Similarity=0.392 Sum_probs=199.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.++||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 46777889999999999999864 68899999987442 2234567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++...+. +++.++..++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~- 159 (267)
T cd06645 87 FCGGGSLQDIYHVTGP---LSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT- 159 (267)
T ss_pred ccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-
Confidence 9999999999876543 899999999999999999999 779999999999999999999999999998765422
Q ss_pred CCCccccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
........|+..|+|||++. ...++.++||||+||++|||++|+.||............. ......... ..
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~-~~- 233 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT----KSNFQPPKL-KD- 233 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh----ccCCCCCcc-cc-
Confidence 22223457899999999874 4568899999999999999999999986533211111111 111100000 00
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+|++.+|++||++++++++
T Consensus 234 -------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 234 -------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred -------cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 00112357789999999999999999999875
No 229
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-34 Score=328.02 Aligned_cols=193 Identities=26% Similarity=0.353 Sum_probs=165.4
Q ss_pred HHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
....+|++.+.||+|+||.||+|+.. +++.||+|+... .....|+.++++++|+||+++++++...+..++
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~--------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK--------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc--------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 34468999999999999999999875 577899987531 123569999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||+. ++|.+++..... .+++..+..++.||+.||.||| +++|+||||||+||+++.++.+||+|||.++...
T Consensus 135 v~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 135 VLPHYS-SDLYTYLTKRSR--PLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEEccC-CcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 999995 688888865443 3899999999999999999999 7799999999999999999999999999997533
Q ss_pred CCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPV 1007 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf 1007 (1109)
. ........||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 209 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 209 V--APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred c--CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1 12223457899999999999999999999999999999999965554
No 230
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.1e-33 Score=313.94 Aligned_cols=257 Identities=25% Similarity=0.341 Sum_probs=200.9
Q ss_pred hcCCCCCceEecCCcceEEEEEecC------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLAN------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 874 (1109)
.++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... .......+.+|+.++++++|+||+++++++.+.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 4678899999999999999998653 5678888876332 22334678999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCC----CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC---ceEE
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQ----TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF---QAHV 947 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 947 (1109)
.++||||+++++|.+++..... ...+++..+.+++.||+.|++||| +.+++||||||+||+++.++ .+|+
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976532 124899999999999999999999 77999999999999998654 6999
Q ss_pred eeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhh
Q 001274 948 GDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIH 1025 (1109)
Q Consensus 948 ~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 1025 (1109)
+|||+++....... ........+..|+|||++.+..++.++|||||||++|||++ |..||..... .+.......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~----~~~~~~~~~ 236 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN----QEVMEFVTG 236 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHHc
Confidence 99999986532211 11112234568999999999999999999999999999997 9999975331 122221111
Q ss_pred ccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1026 EMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
... .. ........+.+++.+|++.+|++||++.+|+++|.
T Consensus 237 ~~~-~~------------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 237 GGR-LD------------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCc-CC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 110 00 01112246789999999999999999999999885
No 231
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2e-33 Score=308.20 Aligned_cols=249 Identities=29% Similarity=0.459 Sum_probs=203.5
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++|++.+.||.|+||.||+|... ++.||+|+++.... ..+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 57888999999999999999875 78999999974422 456789999999999999999999999998999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||.++.....
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~-- 155 (256)
T cd05039 82 MAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG-- 155 (256)
T ss_pred cCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccc--
Confidence 999999999976543 23899999999999999999999 789999999999999999999999999999865321
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
......+..|+|||++.++.++.++||||+|+++|||++ |+.||.... ..+... ......... .
T Consensus 156 --~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~----~~~~~~-~~~~~~~~~-~------- 220 (256)
T cd05039 156 --QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP----LKDVVP-HVEKGYRME-A------- 220 (256)
T ss_pred --cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC----HHHHHH-HHhcCCCCC-C-------
Confidence 112345678999999998899999999999999999998 999987532 111111 111111000 0
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......+.+++.+||..+|++||++.|++++|..
T Consensus 221 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 221 ----PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ----ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 01112467899999999999999999999999864
No 232
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.6e-34 Score=318.43 Aligned_cols=254 Identities=25% Similarity=0.360 Sum_probs=204.1
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|+||.||+|+. .+++.||+|.+..... ...+.+.+|+.+++.++|+||+++++++..++..++|||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 6899999999999999999986 4789999999974432 234668899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++.... +++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||.+.......
T Consensus 97 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 97 YLAGGSLTDVVTETC----MDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred ccCCCCHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999999986532 788999999999999999999 7799999999999999999999999999987654221
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......+++.|+|||+..+..++.++||||+||++|+|++|+.||......... ........+..
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~----~~~~~~~~~~~--------- 235 (297)
T cd06656 170 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----YLIATNGTPEL--------- 235 (297)
T ss_pred -cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe----eeeccCCCCCC---------
Confidence 1223446888999999999988999999999999999999999999753321110 00000000000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.........+.+++.+||+.+|++||++++++++-+..
T Consensus 236 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (297)
T cd06656 236 --QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273 (297)
T ss_pred --CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhc
Confidence 00111223467899999999999999999999975443
No 233
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=5.1e-34 Score=318.79 Aligned_cols=268 Identities=25% Similarity=0.357 Sum_probs=204.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.++||+|+||.||+|+++ +++.||+|+++.........+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999876 58899999987554444455788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|++++.+..+...... +++..+..++.||+.|++||| +.+++||||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEASPGG---LPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 9998777666544332 899999999999999999999 7799999999999999999999999999998765333
Q ss_pred CCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC-c------h
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT-S------E 1032 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~------~ 1032 (1109)
........++..|+|||++.+. .++.++||||+|+++|+|++|+.||......+.... .........+. . .
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL-IQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHhCCCCHHHhhhcccCc
Confidence 2233445678899999999888 789999999999999999999999975432111111 11111000000 0 0
Q ss_pred hhhh-hc-------chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1033 LFDK-RL-------DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1033 ~~~~-~~-------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.+.. .. .............+.+++.+||+.+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0000 00 00000111124668899999999999999999999865
No 234
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.2e-33 Score=315.70 Aligned_cols=258 Identities=27% Similarity=0.403 Sum_probs=203.2
Q ss_pred hcCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 874 (1109)
.++|++.+.||+|+||.||+|+.. ++..||+|++.... .....+.+.+|+.++++++||||+++++++..++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 357889999999999999999863 46789999886432 22345678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCC-------------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQ-------------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSN 935 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~-------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~ 935 (1109)
.++||||+++|+|.+++..... ...+++..+..++.|++.|++||| +.+++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHh
Confidence 9999999999999999974321 123788889999999999999999 779999999999
Q ss_pred ceeeCCCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccC
Q 001274 936 NILLDEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELG 1013 (1109)
Q Consensus 936 NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~ 1013 (1109)
||+++.++.++|+|||.++....... ........++.|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~-- 237 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA-- 237 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--
Confidence 99999999999999999875432211 11122345678999999998999999999999999999998 888986432
Q ss_pred CcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1014 GDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
..+............ ........+.+++.+||+.+|++|||+.|+++.|++
T Consensus 238 --~~~~~~~~~~~~~~~-------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 --HEEVIYYVRDGNVLS-------------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HHHHHHHHhcCCCCC-------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 122222211111100 001122457889999999999999999999998863
No 235
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.4e-33 Score=311.42 Aligned_cols=259 Identities=28% Similarity=0.388 Sum_probs=206.5
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||.|+||+||+|... ++..||+|++....... ..+.+.+|+++++.++|+||+++++.+..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 46889999999999999999854 68899999986443322 56778999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
++++++|.++++.......+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999999999976543234899999999999999999999 7899999999999999999999999999997665322
Q ss_pred CC---CccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 961 SK---SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 961 ~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
.. ......++..|+|||++... .++.++|||||||++|||++|+.||.............. ...+ .+..
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~----~~~~---~~~~ 229 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ----NDPP---SLET 229 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc----CCCC---CcCC
Confidence 22 12344688999999998877 789999999999999999999999975443222222221 1110 0000
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.. ........+.+++.+||+.||++||++.+++++
T Consensus 230 ~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 230 GA-----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cc-----ccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 011223467899999999999999999999876
No 236
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.5e-33 Score=311.72 Aligned_cols=256 Identities=25% Similarity=0.427 Sum_probs=202.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CC---cEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NG---EVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
++|++.+.||+|+||.||+|++. ++ ..||||+++.. ......++|..|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 45788899999999999999865 23 36999998643 223345689999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||+++++|.+++..... .+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++++|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 83 ITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999999976543 3899999999999999999999 7899999999999999999999999999987654
Q ss_pred CCCCCC-cc-cc--ccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCch
Q 001274 958 LPYSKS-MS-AI--AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSE 1032 (1109)
Q Consensus 958 ~~~~~~-~~-~~--~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1109)
...... .. .. ..+..|+|||++.+..++.++||||+||++|||++ |..||...... ....++. ...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-~~~~~i~----~~~~~~~ 232 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVINAIE----QDYRLPP 232 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-HHHHHHH----cCCcCCC
Confidence 221111 11 11 12457999999999999999999999999999987 99999754311 1222221 1111000
Q ss_pred hhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1033 LFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..+....+.+++.+||+.+|.+||++++++.+|+.+
T Consensus 233 ------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 233 ------------PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111224577899999999999999999999998765
No 237
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-33 Score=314.98 Aligned_cols=261 Identities=25% Similarity=0.361 Sum_probs=204.8
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.+.||+|+||+||+|++. +++.||+|.++... .......+.+|++++++++|+||+++++++...+..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 6788899999999999999976 78999999887432 223346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|..++........+++..+..++.+++.|+.|||+ +.+|+||||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 9999999998764322348999999999999999999994 248999999999999999999999999999765321
Q ss_pred CCccccccccceeccccccCCC------CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMK------VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
......++..|+|||++.+.. ++.++||||+||++|||++|+.||..... ......+........+ .
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~--~--- 229 (286)
T cd06622 157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY-ANIFAQLSAIVDGDPP--T--- 229 (286)
T ss_pred -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch-hhHHHHHHHHhhcCCC--C---
Confidence 223346788999999986543 58899999999999999999999975321 1111111111111110 0
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
........+.+++.+||+.+|++||++.+++++-+.....
T Consensus 230 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 230 --------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred --------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 0112334577899999999999999999999986654433
No 238
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-33 Score=318.75 Aligned_cols=263 Identities=25% Similarity=0.416 Sum_probs=205.0
Q ss_pred cCCCCCceEecCCcceEEEEEec--------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA--------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ 872 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 872 (1109)
++|.+.++||+|+||.||+|+.. ....||+|.++... .......+.+|+++++++ +||||+++++++...
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 57888999999999999999742 24568999886432 233456788999999999 699999999999999
Q ss_pred CceEEEEEeccCCCHHHHhccCCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQ-------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL 939 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 939 (1109)
+..++||||+++|+|.+++..... ...+++..+.+++.|++.|+.||| +.+++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEE
Confidence 999999999999999999965421 124889999999999999999999 7899999999999999
Q ss_pred CCCCceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHH
Q 001274 940 DEEFQAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLV 1017 (1109)
Q Consensus 940 ~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~ 1017 (1109)
+.++.+||+|||.++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||..... ....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~~~~ 246 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-EELF 246 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-HHHH
Confidence 9999999999999986542111 11122234567999999998899999999999999999999 8899865321 1111
Q ss_pred HHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhccC
Q 001274 1018 TWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSVS 1085 (1109)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 1085 (1109)
..+. .... .. ........+.+++.+||+.+|++||++.++++.|.++.....
T Consensus 247 ~~~~---~~~~-~~------------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 298 (314)
T cd05099 247 KLLR---EGHR-MD------------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVS 298 (314)
T ss_pred HHHH---cCCC-CC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhc
Confidence 1111 1110 00 011112356789999999999999999999999998876543
No 239
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.9e-33 Score=309.78 Aligned_cols=254 Identities=31% Similarity=0.455 Sum_probs=203.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..+.||+|+||.||+|... +++.||+|.++.........+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999864 689999999986544434567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... +++..+..++.+++.|+.||| +.+++|+||+|+||+++.++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHGRI---LDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhcCC---CChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 999999999976532 788999999999999999999 78999999999999999999999999999987653322
Q ss_pred CCc---cccccccceeccccccCCC---CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 962 KSM---SAIAGSYGYIAPEYAYTMK---VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 962 ~~~---~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
... ....+++.|+|||++.+.. ++.++||||||+++||+++|+.||....... ...........+ .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~---~~~ 228 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF---QIMFHVGAGHKP---PIP 228 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH---HHHHHHhcCCCC---CCC
Confidence 211 2356788999999998766 8899999999999999999999997543111 111111111100 000
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
. .......+.+++.+||+.+|++||++.|++.+
T Consensus 229 ~--------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 229 D--------SLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred c--------ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0 01112346789999999999999999999864
No 240
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.3e-34 Score=317.08 Aligned_cols=255 Identities=27% Similarity=0.403 Sum_probs=200.8
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
.+|+..++||+|+||.||+|+.. ++..||+|.+... .......+.+|++++++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL 82 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence 46788899999999999999632 3567899987633 233456799999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCC------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC
Q 001274 876 LLLYEYMENGSLGEQLHGNKQT------------CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF 943 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~ 943 (1109)
++||||+++++|.+++...... ..+++..+..++.|++.|++||| +.+++||||||+||++++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCC
Confidence 9999999999999999764321 23789999999999999999999 78999999999999999999
Q ss_pred ceEEeeccccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHH
Q 001274 944 QAHVGDFGLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVR 1021 (1109)
Q Consensus 944 ~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~ 1021 (1109)
.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .+...
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~ 235 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN----TEAIE 235 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH----HHHHH
Confidence 999999999975532211 11122345678999999999999999999999999999998 8999865331 11121
Q ss_pred HhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1022 RSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
......... ........+.+++.+||+.||++||+++||.+.|+
T Consensus 236 ~~~~~~~~~-------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 CITQGRELE-------------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHcCccCC-------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111000 00111235779999999999999999999999875
No 241
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.7e-34 Score=317.48 Aligned_cols=261 Identities=26% Similarity=0.362 Sum_probs=200.3
Q ss_pred HHHHHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEE---
Q 001274 796 NLLEATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCY--- 870 (1109)
Q Consensus 796 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~--- 870 (1109)
.+....++|++.+.||+|+||+||+|+.. +++.||+|++... ......+.+|+.+++++ +|+||+++++++.
T Consensus 12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI---HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc---cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 34456689999999999999999999865 6889999987632 22345678899999999 6999999999884
Q ss_pred --eCCceEEEEEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 001274 871 --HQDSNLLLYEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHV 947 (1109)
Q Consensus 871 --~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 947 (1109)
.++..++||||+++++|.+++.... ....+++..+..++.|+++|+.||| +.+++||||||+||+++.++.+++
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEE
Confidence 3456799999999999999876422 2234888999999999999999999 779999999999999999999999
Q ss_pred eeccccccccCCCCCCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHH
Q 001274 948 GDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRR 1022 (1109)
Q Consensus 948 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~ 1022 (1109)
+|||.++..... ........|++.|+|||++. +..++.++||||+||++|||++|+.||......... ..
T Consensus 166 ~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~----~~ 240 (286)
T cd06638 166 VDFGVSAQLTST-RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL----FK 240 (286)
T ss_pred ccCCceeecccC-CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH----hh
Confidence 999999865422 12223446899999999875 345789999999999999999999998754321111 11
Q ss_pred hhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1023 SIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
...... ..... .......+.+++.+||+.||++||++.|++++.+
T Consensus 241 ~~~~~~--~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 241 IPRNPP--PTLHQ---------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred ccccCC--CcccC---------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 001000 00000 0011235779999999999999999999998753
No 242
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=8.5e-34 Score=311.11 Aligned_cols=250 Identities=27% Similarity=0.412 Sum_probs=202.7
Q ss_pred cCCCCCceEecCCcceEEEEEecC-CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN-GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|+..+.||+|+||.||+|+..+ ++.||+|.+.... ..+.+.+|++++++++|+||+++++++...+..++++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 578888999999999999999764 8899999986432 25789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 79 YCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred cCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 9999999999975443 3899999999999999999999 7799999999999999999999999999998664322
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||++.+..++.++||||||+++|+|++|+.||......... ....... .. ...
T Consensus 154 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~----~~~~~~~--~~-----~~~- 220 (256)
T cd06612 154 -AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI----FMIPNKP--PP-----TLS- 220 (256)
T ss_pred -cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh----hhhccCC--CC-----CCC-
Confidence 1223345788999999999999999999999999999999999999753321111 0000000 00 000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
........+.+++.+||+.+|++|||+.|++++
T Consensus 221 ---~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 221 ---DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred ---chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 011122457899999999999999999999875
No 243
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.3e-33 Score=310.52 Aligned_cols=239 Identities=23% Similarity=0.380 Sum_probs=186.6
Q ss_pred ceEecCCcceEEEEEecC-------------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc
Q 001274 808 AVIGRGACGTVYKATLAN-------------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 874 (1109)
+.||+|+||.||+|+... ...||+|++.... ......+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 368999999999997532 2258888875332 2344578889999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc-------eEE
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQ-------AHV 947 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~-------~kl 947 (1109)
.++||||+++|+|..++..... .+++..+.+++.||++|++||| +++|+||||||+||+++.++. +++
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 9999999999999999876443 3899999999999999999999 789999999999999987664 899
Q ss_pred eeccccccccCCCCCCccccccccceecccccc-CCCCCccchhHHHHHHHHHHH-hCCCCCCCcccCCcHHHHHHHhhh
Q 001274 948 GDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSFGVVLLELI-TGKSPVQSLELGGDLVTWVRRSIH 1025 (1109)
Q Consensus 948 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvll~ell-tg~~pf~~~~~~~~~~~~~~~~~~ 1025 (1109)
+|||.+..... .....++..|+|||++. +..++.++|||||||++|||+ +|+.||.... ..+... ...
T Consensus 154 ~d~g~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~----~~~~~~-~~~ 223 (262)
T cd05077 154 SDPGIPITVLS-----RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT----LAEKER-FYE 223 (262)
T ss_pred CCCCCCccccC-----cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc----hhHHHH-HHh
Confidence 99999875431 12345788899999887 566899999999999999998 5888876432 111111 011
Q ss_pred ccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1026 EMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
..... .......+.+++.+||+.||++||++.+|++++
T Consensus 224 ~~~~~--------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 GQCML--------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred cCccC--------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11000 001123577999999999999999999999876
No 244
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.5e-34 Score=319.01 Aligned_cols=267 Identities=22% Similarity=0.318 Sum_probs=202.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|.+.++||+|+||.||+|+++ +++.||+|.++..... .....+.+|++++++++|+||+++++++...+..++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 57899999999999999999865 6889999998744322 234567789999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|++ ++|.+++..... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 85 YLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred ccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 997 599998876543 3889999999999999999999 7899999999999999999999999999997654221
Q ss_pred CCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CCchhhhhhc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PTSELFDKRL 1038 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1038 (1109)
.......+++.|+|||++.+. .++.++||||+||++|||++|+.||..... .+.+........ +....+....
T Consensus 159 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 159 -KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV----EEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred -CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHcCCCChhhchhhh
Confidence 122334578899999988754 478899999999999999999999975432 111111111000 0011110000
Q ss_pred --------chh-------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1039 --------DLS-------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1039 --------~~~-------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
... ..........+.+++.+|++.||.+|||++|++++-+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~ 290 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 000 000011123567899999999999999999999876553
No 245
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.7e-34 Score=293.22 Aligned_cols=282 Identities=23% Similarity=0.302 Sum_probs=212.8
Q ss_pred HHhcCCCCCceEecCCcceEEEEEec---C--CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe-C
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATLA---N--GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH-Q 872 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~~---~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 872 (1109)
+....|+....||+|.||.||+|..+ + ...+|+|+++.............+|+..++.++|||++.+..++.. +
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 44568999999999999999999532 2 3379999998775555566778899999999999999999999877 7
Q ss_pred CceEEEEEeccCCCHHHHhccCC--CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC----CceE
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNK--QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE----FQAH 946 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~k 946 (1109)
...++++||++. +|.+.++-+. ..+.++...+..|+.||+.|+.||| +.-|+||||||.||||..+ |.||
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeE
Confidence 788999999986 8888885433 2346899999999999999999999 5679999999999999887 8999
Q ss_pred EeeccccccccCCCCC--CccccccccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccC-----CcHHH
Q 001274 947 VGDFGLAKLIDLPYSK--SMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLELG-----GDLVT 1018 (1109)
Q Consensus 947 l~DFG~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~~-----~~~~~ 1018 (1109)
|+|||+++.+..+... ....++-|+.|+|||.+.+.+ |+.+.|||+.||++.||+|-++-|.+.+.. .-..+
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 9999999988755432 235677899999999998765 899999999999999999999888765421 11223
Q ss_pred HHHHhhhccCCCchhhhhhcchhhc-------------cc---HH-------HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001274 1019 WVRRSIHEMVPTSELFDKRLDLSAK-------------RT---VE-------EMTLFLKIALFCSSTSPLNRPTMREVIA 1075 (1109)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~---~~-------~~~~~~~li~~cl~~dP~~RPt~~evl~ 1075 (1109)
.+.+.++-...+.+...+.+..-++ .. .. ......+++.+++..||.+|.|+.+.++
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 3333333222111111111100000 00 00 0122678999999999999999999999
Q ss_pred HHHHhhhcc
Q 001274 1076 MMIDARQSV 1084 (1109)
Q Consensus 1076 ~L~~~~~~~ 1084 (1109)
+........
T Consensus 337 h~yF~~d~l 345 (438)
T KOG0666|consen 337 HPYFTEDPL 345 (438)
T ss_pred ccccccCCC
Confidence 876655443
No 246
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1e-33 Score=315.29 Aligned_cols=254 Identities=24% Similarity=0.318 Sum_probs=199.8
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
|++.+.||+|+||.||+|+.. ++..+|+|.+.... ....+.+.+|+++++.++|||++++++++..++..++||||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 566788999999999999876 57788888885332 234567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
++++|..++..... .+++..+..++.|+++||.||| +.+++||||||+||+++.++.+|++|||++...... ..
T Consensus 85 ~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~ 158 (282)
T cd06643 85 AGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQ 158 (282)
T ss_pred CCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccc-cc
Confidence 99999998865333 3899999999999999999999 779999999999999999999999999998765321 12
Q ss_pred Cccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 963 SMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
......++..|+|||++. +..++.++||||+||++|||++|+.||...... +.+........+.. ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~-~~--- 230 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPPTL-AQ--- 230 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH----HHHHHHhhcCCCCC-CC---
Confidence 223456889999999874 455788999999999999999999998754321 11111111111100 00
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.......+.+++.+||+.+|++||++.+++++-+..
T Consensus 231 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 266 (282)
T cd06643 231 -------PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVT 266 (282)
T ss_pred -------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEe
Confidence 011123577999999999999999999999876543
No 247
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.1e-33 Score=312.73 Aligned_cols=250 Identities=25% Similarity=0.406 Sum_probs=194.3
Q ss_pred eEecCCcceEEEEEecC-Cc--EEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 809 VIGRGACGTVYKATLAN-GE--VIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
.||+|+||.||+|++++ +. .+|+|.++.. ......+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 58999999999998753 43 4688877632 2223456788999999999 899999999999999999999999999
Q ss_pred CCHHHHhccCCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 885 GSLGEQLHGNKQ-------------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 885 gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
|+|.+++..... ...+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 999999975431 123789999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCC
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1109)
++..... .........+..|+|||++.+..++.++|||||||++|||++ |..||.... ..+....... ....
T Consensus 158 l~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~----~~~~~~~~~~-~~~~ 230 (270)
T cd05047 158 LSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT----CAELYEKLPQ-GYRL 230 (270)
T ss_pred Cccccch--hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC----HHHHHHHHhC-CCCC
Confidence 9864321 111112234567999999988899999999999999999997 999996532 1122221111 1000
Q ss_pred chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1031 SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
. ........+.+++.+||+.+|.+|||+.++++.|.++.
T Consensus 231 ~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 231 E------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred C------------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 01112235779999999999999999999999998764
No 248
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.2e-33 Score=315.60 Aligned_cols=268 Identities=25% Similarity=0.322 Sum_probs=205.1
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.+.||+|+||.||+|++. +++.||+|++..........+.+.+|+.++++++|+||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999865 689999999986554344457899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+ +++|.+++..... .+++.++..++.||++|++||| +.+++|+||||+||+++.++.++++|||.+........
T Consensus 81 ~-~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 9999999876543 3899999999999999999999 77999999999999999999999999999987653322
Q ss_pred CCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCC--------C--
Q 001274 962 KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVP--------T-- 1030 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--------~-- 1030 (1109)
.......++..|+|||++.+. .++.++||||+|+++|||++|+.||.+....... ..+........+ .
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQL-AIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHH-HHHHHHcCCCChHHHhhccCcch
Confidence 223445688999999998754 4689999999999999999998887643321111 111111110000 0
Q ss_pred -chhh-hhhcchh-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1031 -SELF-DKRLDLS-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1031 -~~~~-~~~~~~~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.... ....... .....+....+.+++.+|++.+|++||++++++++-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0000 0000000 000112236788999999999999999999999874
No 249
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.6e-34 Score=314.29 Aligned_cols=257 Identities=23% Similarity=0.376 Sum_probs=203.4
Q ss_pred cCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
.+|+..+.||+|+||+||+|+.+ +.+.||+|.+.... .....+.+.+|++++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 47888999999999999999864 24678998875322 222356799999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCCC------CCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTC------LLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGD 949 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~------~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 949 (1109)
++||||+++|+|.+++....... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcc
Confidence 99999999999999997655221 4899999999999999999999 77999999999999999999999999
Q ss_pred ccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccC
Q 001274 950 FGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMV 1028 (1109)
Q Consensus 950 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 1028 (1109)
||++...............++..|+|||.+.+..++.++||||+|+++|+|++ |..||..... ...+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~----~~~~~~~~~~~~ 236 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD----EEVLNRLQAGKL 236 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch----HHHHHHHHcCCc
Confidence 99987543222223344466788999999988889999999999999999999 8889864321 111221111111
Q ss_pred CCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1029 PTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
... . .......+.+++.+||+.+|++||++.|+++++.
T Consensus 237 ~~~--~----------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 237 ELP--V----------PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCC--C----------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 000 0 0112236789999999999999999999999875
No 250
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.7e-33 Score=311.07 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=190.4
Q ss_pred ceEecCCcceEEEEEecC---CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLAN---GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||.||+|.+.+ +..+|+|+++.... ......+.+|+.++++++||||+++++++.+....++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 368999999999998643 45789998864432 23345788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCC--CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC-
Q 001274 885 GSLGEQLHGNKQ--TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS- 961 (1109)
Q Consensus 885 gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 961 (1109)
|+|.++++.... ....++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||.++.......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 999999975432 223577788899999999999999 77999999999999999999999999999975432211
Q ss_pred CCccccccccceeccccccCC-------CCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTM-------KVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
.......++..|+|||++.+. .++.++||||||+++|||++ |+.||......... ........ ...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~----~~~~~~~~--~~~ 230 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL----TYTVREQQ--LKL 230 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH----HHHhhccc--CCC
Confidence 112234577889999988642 35789999999999999997 99999754322111 11111110 000
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
..+.. .......+.+++.+|| .+|++|||++||+..|.
T Consensus 231 ~~~~~------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRL------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCcc------CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 01110 0111234678999999 58999999999998763
No 251
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.7e-33 Score=309.97 Aligned_cols=251 Identities=27% Similarity=0.397 Sum_probs=192.9
Q ss_pred ceEecCCcceEEEEEec----CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEE-eCCceEEEEEec
Q 001274 808 AVIGRGACGTVYKATLA----NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCY-HQDSNLLLYEYM 882 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 882 (1109)
+.||+|+||+||+|.+. ++..||+|++... ......+.+.+|+.+++.++||||+++++++. .++..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 46899999999999853 2457999987532 22234567889999999999999999999876 455678999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC-
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS- 961 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 961 (1109)
++|+|.+++...... .++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 80 KHGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 999999999765432 677888999999999999999 77999999999999999999999999999975532111
Q ss_pred --CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhC-CCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 962 --KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITG-KSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 962 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.......++..|+|||++.+..++.++|||||||++|||++| ..||.... ..+..........+..
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~----~~~~~~~~~~~~~~~~------- 223 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD----SFDITVYLLQGRRLLQ------- 223 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHHhcCCCCCC-------
Confidence 111233457789999999988999999999999999999995 55565322 2222222221111100
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.......+.+++.+||+.+|++||++.|+++.++.+.
T Consensus 224 ------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 224 ------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred ------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0011235779999999999999999999999998875
No 252
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=9.4e-34 Score=315.85 Aligned_cols=260 Identities=28% Similarity=0.401 Sum_probs=201.5
Q ss_pred cCCCCCceEecCCcceEEEEEe-----cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--Cc
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-----ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DS 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 874 (1109)
.-|++.+.||+|+||.||+|+. .++..||+|.++... .....+.+.+|++++++++|||++++.+++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3568889999999999999974 357889999986442 233456789999999999999999999998875 56
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++||||+++++|.+++..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||+++
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccc
Confidence 7899999999999999976543 3899999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCC--CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCccc----------CC-cHHHHHH
Q 001274 955 LIDLPYSK--SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLEL----------GG-DLVTWVR 1021 (1109)
Q Consensus 955 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~----------~~-~~~~~~~ 1021 (1109)
........ ......++..|+|||+..+..++.++|||||||++|||++++.|+..... +. ....++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 66422211 11234567789999999988899999999999999999998776432110 00 1111111
Q ss_pred HhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1022 RSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
. ...... . .........+.+++.+||+.+|++||++.++++.++.+
T Consensus 238 ~-~~~~~~--------~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 V-LEEGKR--------L----PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred H-HHcCcc--------C----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1 111000 0 00111234688999999999999999999999999875
No 253
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1e-33 Score=310.61 Aligned_cols=249 Identities=25% Similarity=0.397 Sum_probs=198.1
Q ss_pred ceEecCCcceEEEEEecC--C--cEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEecc
Q 001274 808 AVIGRGACGTVYKATLAN--G--EVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
++||+|++|.||+|++.+ + ..||+|.+...... ...+.+.+|++++++++|+||+++++++.. ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 368999999999998643 3 36899998754332 456789999999999999999999999988 88899999999
Q ss_pred CCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC-
Q 001274 884 NGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK- 962 (1109)
Q Consensus 884 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~- 962 (1109)
+++|.+++..... ..+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||+++........
T Consensus 79 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 79 LGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 9999999987552 24899999999999999999999 789999999999999999999999999999876432211
Q ss_pred -CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 963 -SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 963 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
......++..|+|||++.+..++.++||||+||++|||++ |+.||..... .+..+..........
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~~~~~~~~~~~--------- 221 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG----SQILKKIDKEGERLE--------- 221 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHhcCCcCC---------
Confidence 1123456788999999999999999999999999999999 9999975322 122221111110000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
........+.+++.+||+.+|++||+++++++.|.
T Consensus 222 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 ---RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 01112346789999999999999999999998875
No 254
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8.2e-34 Score=316.43 Aligned_cols=264 Identities=23% Similarity=0.373 Sum_probs=199.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..+.||+|+||.||+|++. +|+.||+|+++...........+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999875 689999999975543333446678899999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
++ ++|.+++..... .+++..+..++.||++|+.||| +.+++||||||+||+++.++.+||+|||.++......
T Consensus 81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 153 (284)
T cd07839 81 CD-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV- 153 (284)
T ss_pred CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-
Confidence 96 588888765433 3899999999999999999999 7799999999999999999999999999998654221
Q ss_pred CCccccccccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCc-hh------
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTS-EL------ 1033 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~------ 1033 (1109)
.......++..|+|||++.+.. ++.++||||+||++|||+||+.||..... ..+..+.......... ..
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND---VDDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC---HHHHHHHHHHHhCCCChHHhHHhhh
Confidence 2223446788999999987654 78999999999999999999998653221 1111111111000000 00
Q ss_pred ---------hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1034 ---------FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1034 ---------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
+...... ..........+.+++.+||+.||++|||+++++++-
T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 231 LPDYKPYPMYPATTSL-VNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred cccccccCCCCCcchh-hhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 0000000 000111234577999999999999999999998763
No 255
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.8e-33 Score=310.46 Aligned_cols=253 Identities=25% Similarity=0.410 Sum_probs=196.4
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC---cchhHHHHHHHHHhccCCCCceeeEEEEEEeC--Cce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG---ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 875 (1109)
.+|+..+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999864 6899999988644322 12345688899999999999999999988753 567
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++++||+++++|.+++..... +++.....++.|++.||+||| +.+|+||||+|+||+++.++.++|+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGA---LTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 899999999999999976543 788999999999999999999 77999999999999999999999999999976
Q ss_pred ccCCC--CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 956 IDLPY--SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 956 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
..... ........++..|+|||++.+..++.++||||+||++|||++|+.||..... ...+........ ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~~~~~~~--~~~ 229 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPT--NPQ 229 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHHHhcCCC--CCC
Confidence 53211 1112334578899999999998999999999999999999999999975421 111111111110 000
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
+ .......+..++ .||..+|++||+++||+++-
T Consensus 230 ~----------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp 262 (266)
T cd06651 230 L----------PSHISEHARDFL-GCIFVEARHRPSAEELLRHP 262 (266)
T ss_pred C----------chhcCHHHHHHH-HHhcCChhhCcCHHHHhcCc
Confidence 0 111123345566 68889999999999998763
No 256
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.4e-33 Score=309.74 Aligned_cols=256 Identities=25% Similarity=0.338 Sum_probs=198.0
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
+++.+.....||+|+||.||+|++. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++..++..++|
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 4455666678999999999999855 67889999886432 23456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-CCceEEeecccccccc
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE-EFQAHVGDFGLAKLID 957 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~ 957 (1109)
+||+++++|.+++.........++..+..++.||+.|++||| +.+|+||||||+||+++. ++.++|+|||.+....
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 999999999999976432211278888899999999999999 779999999999999976 6799999999987653
Q ss_pred CCCCCCccccccccceeccccccCCC--CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMK--VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
.. ........++..|+|||++.+.. ++.++||||+|+++|+|++|+.||........ ..+ ........+ .
T Consensus 161 ~~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~~---~-- 232 (268)
T cd06624 161 GI-NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-AMF-KVGMFKIHP---E-- 232 (268)
T ss_pred cC-CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-hHh-hhhhhccCC---C--
Confidence 21 22223446889999999987644 78999999999999999999999875321111 111 110000000 0
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
........+.+++.+||+.+|++|||+.|++++
T Consensus 233 --------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 233 --------IPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred --------CCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 011122457789999999999999999999876
No 257
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=322.93 Aligned_cols=252 Identities=25% Similarity=0.376 Sum_probs=204.3
Q ss_pred CCCCCceEecCCcceEEEEEecC-CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLAN-GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
.|.++..||.|+||.||+|..++ +-..|.|++... ..+..++|+-|++|+..++||+||++++.|...+..+++.||
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 46677789999999999998664 444567777543 244678899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
|.||-.+..+-.-+. .+++.++..+++|+++||.||| +.+|||||||+.|||++-+|.++++|||++..... ..
T Consensus 111 C~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~ 184 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TR 184 (1187)
T ss_pred cCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchh-HH
Confidence 999999998876654 3999999999999999999999 77999999999999999999999999999875431 23
Q ss_pred CCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 962 KSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
.....+.||+.|||||+.. ..+|++++||||||+++.||..+.+|-.... ....+-+......|. +.
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln----pMRVllKiaKSePPT--Ll-- 256 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN----PMRVLLKIAKSEPPT--LL-- 256 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc----hHHHHHHHhhcCCCc--cc--
Confidence 3446789999999999865 5689999999999999999999999965432 222222222222211 11
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.+......|.+|+.+|+..+|..||+++++++|-
T Consensus 257 -------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 257 -------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHP 290 (1187)
T ss_pred -------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence 2334456799999999999999999999998653
No 258
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-33 Score=314.55 Aligned_cols=259 Identities=25% Similarity=0.390 Sum_probs=206.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.++||+|+||+||+|+.. +++.||+|++.... .....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 46788899999999999999865 68899999886432 23345678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++...+. +++..+..++.+++.|+.|||+ ..+++||||+|+||+++.++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 84 FMDCGSLDRIYKKGGP---IPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred cCCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 9999999999876543 8999999999999999999993 248999999999999999999999999998754311
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC-------cHHHHHHHhhhccCCCchh
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGG-------DLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 1033 (1109)
......++..|+|||++.+..++.++|||||||++|+|++|+.||....... ...++......+..+.
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 232 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPR--- 232 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCC---
Confidence 1223568999999999988899999999999999999999999998543211 1122222222211100
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.. ..+....+.+++.+||+.||++||++.|++++.....
T Consensus 233 ----~~-----~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 233 ----LP-----SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred ----CC-----chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 00 0112345789999999999999999999999865544
No 259
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.9e-34 Score=318.64 Aligned_cols=267 Identities=24% Similarity=0.381 Sum_probs=202.0
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|+..++||+|+||.||+|+++ +++.||+|++..........+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888899999999999999976 58999999986544333345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|++++++.++...... +++..+..++.||+.|++||| +.+++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYPNG---LDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 9999999887765432 899999999999999999999 7799999999999999999999999999998654322
Q ss_pred CCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCC-------Cch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVP-------TSE 1032 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~~ 1032 (1109)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||............. .......+ ...
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHII-KCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH-HHhCCCchhhHHHhccch
Confidence 22334567899999999875 447889999999999999999999987432111111111 00000000 000
Q ss_pred hhhhhcchh-------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1033 LFDKRLDLS-------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1033 ~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
......... ..........+.+++.+||+.+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000 00011223568899999999999999999999875
No 260
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.4e-33 Score=315.74 Aligned_cols=263 Identities=28% Similarity=0.388 Sum_probs=202.8
Q ss_pred CCHHHHHHHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEE
Q 001274 792 FKYHNLLEATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFC 869 (1109)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 869 (1109)
+.+.++..+.++|.+.+.||+|+||.||+|..+ +++.||+|++... ......+.+|+.+++++ +|||++++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI---SDVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc---ccHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 344455566789999999999999999999864 6889999988632 22345678899999998 899999999998
Q ss_pred EeCC-----ceEEEEEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC
Q 001274 870 YHQD-----SNLLLYEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF 943 (1109)
Q Consensus 870 ~~~~-----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~ 943 (1109)
...+ ..++||||+++++|.++++... ....+++..+..++.|++.|+.||| +.+++||||||+||+++.++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCC
Confidence 7543 5789999999999999886422 1224899999999999999999999 77999999999999999999
Q ss_pred ceEEeeccccccccCCCCCCccccccccceeccccccCC-----CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHH
Q 001274 944 QAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTM-----KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVT 1018 (1109)
Q Consensus 944 ~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~ 1018 (1109)
.+||+|||.++...... .......++..|+|||++... .++.++||||+||++|||++|+.||...........
T Consensus 166 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 166 GVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred CEEEeecccchhccccc-ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 99999999988654221 112334678899999987643 368899999999999999999999975432111111
Q ss_pred HHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1019 WVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
...... ....+ ..+....+.+++.+||+.+|++||++.|++++
T Consensus 245 ----~~~~~~--~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 245 ----IPRNPP--PTLLH---------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ----HhcCCC--CCCCc---------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111111 11100 11122357899999999999999999999976
No 261
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2e-33 Score=316.07 Aligned_cols=259 Identities=24% Similarity=0.414 Sum_probs=201.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCc----EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGE----VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
.+|+..+.||+|+||.||+|.+. +++ .||+|.+.... ......++.+|+.+++.++||||+++++++... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 56788899999999999999864 444 47888876332 223345688999999999999999999998754 467
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+++||+++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.++..
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccc
Confidence 99999999999999976543 3889999999999999999999 779999999999999999999999999999865
Q ss_pred cCCCCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 957 DLPYSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 957 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
...... ......++..|+|||++.+..++.++|||||||++|||++ |+.||.+.. ......++.... ..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~--~~~~~--- 233 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP-TREIPDLLEKGE--RLPQP--- 233 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHCCC--CCCCC---
Confidence 422211 1223345778999999999999999999999999999998 999987532 111222222110 01000
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
......+..++.+||..+|++||+++++++.+..+....
T Consensus 234 -----------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 234 -----------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred -----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 011235678999999999999999999999999875544
No 262
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=9.6e-34 Score=315.17 Aligned_cols=255 Identities=26% Similarity=0.377 Sum_probs=202.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|+||+||+|++. +++.||+|.+... .....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 46888889999999999999865 6889999998643 22345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... .+++..+..++.|++.|+.||| +.+|+|+||||+||+++.++.++|+|||.+......
T Consensus 83 ~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~- 156 (280)
T cd06611 83 FCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST- 156 (280)
T ss_pred ccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccc-
Confidence 9999999999876543 3899999999999999999999 779999999999999999999999999998755321
Q ss_pred CCCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
........+++.|+|||++. +..++.++||||+|+++|||++|+.||...... +.+........+. +.
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~---~~ 229 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVLLKILKSEPPT---LD 229 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHHHHHhcCCCCC---cC
Confidence 22223456889999999874 345788999999999999999999999754321 1111111111100 00
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
........+.+++.+||+.+|++||++.+++++-+-
T Consensus 230 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 265 (280)
T cd06611 230 --------QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFV 265 (280)
T ss_pred --------CcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhh
Confidence 011112357789999999999999999999988554
No 263
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.9e-33 Score=311.78 Aligned_cols=254 Identities=29% Similarity=0.377 Sum_probs=205.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|+..+.||.|+||.||+|++. +++.||+|++.... .......+.+|+++++.++|+||+++++++..+...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 36788899999999999999865 68999999987443 23345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++... .+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++++|||.++......
T Consensus 80 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 80 YCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 99999999999764 3899999999999999999999 7899999999999999999999999999998765322
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||++.+..++.++||||||+++|||+||+.||...... ...........+ ....
T Consensus 153 -~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~----~~~~~~~~~~~~--~~~~----- 220 (274)
T cd06609 153 -SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM----RVLFLIPKNNPP--SLEG----- 220 (274)
T ss_pred -cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH----HHHHHhhhcCCC--CCcc-----
Confidence 2233456888999999999988999999999999999999999999754311 111111111110 0000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
......+.+++.+||..+|++||++++++++-+-.
T Consensus 221 -----~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~ 255 (274)
T cd06609 221 -----NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIK 255 (274)
T ss_pred -----cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhc
Confidence 00223577899999999999999999999875544
No 264
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.1e-33 Score=309.50 Aligned_cols=253 Identities=26% Similarity=0.343 Sum_probs=204.4
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
..|+..+.||+|+||.||+|.+. +++.||+|+++... .......+.+|++++++++|+||+++++++.+....++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 35777789999999999999865 58899999987432 23345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++... .+++..+..++.|++.|++|+| +.+++|+||+|+||+++.++.++++|||++......
T Consensus 83 ~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~- 154 (277)
T cd06640 83 YLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT- 154 (277)
T ss_pred cCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCC-
Confidence 99999999998753 2788899999999999999999 789999999999999999999999999999765422
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
........++..|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~------------ 218 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM----RVLFLIPKNNP------------ 218 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH----hHhhhhhcCCC------------
Confidence 11223346788999999999889999999999999999999999998753311 11111000000
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..........+.+++.+||+.+|++||++.+++++-+..
T Consensus 219 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06640 219 -PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIV 257 (277)
T ss_pred -CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhh
Confidence 011223345678999999999999999999999886543
No 265
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.3e-33 Score=307.99 Aligned_cols=250 Identities=29% Similarity=0.394 Sum_probs=201.4
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC---cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG---ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
+|+..+.||+|+||+||+|... +++.||+|.+...... .+..+.+.+|+++++.++|+||+++++++..++..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999876 7899999998754321 23456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+++++|.+++..... +++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYGS---FPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 999999999999976543 789999999999999999999 77999999999999999999999999999886542
Q ss_pred CCCCCccccccccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
.. ......++..|+|||.+.... ++.++|+||+|+++|+|++|+.||..... ........... .... +
T Consensus 155 ~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~-~~~~-~--- 223 (258)
T cd06632 155 FS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVFKIGRSK-ELPP-I--- 223 (258)
T ss_pred cc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHHHHHhcc-cCCC-c---
Confidence 22 234456888999999988776 89999999999999999999999975431 11111111100 0000 0
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.+|.+||++.+++.+
T Consensus 224 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 224 -------PDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred -------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 11112356789999999999999999999865
No 266
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.1e-33 Score=308.04 Aligned_cols=251 Identities=25% Similarity=0.402 Sum_probs=203.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..+.||+|+||.||+|... +++.||+|.+..........+.+.+|++++++++|||++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778899999999999999864 688999999976544445567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-CceEEeeccccccccCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE-FQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~~~~~~ 960 (1109)
+++++|.+++..... ..+++..+..++.++++|++||| +.+++|+||+|+||+++.+ +.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~- 155 (256)
T cd08220 81 APGGTLAEYIQKRCN-SLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK- 155 (256)
T ss_pred CCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC-
Confidence 999999999976432 23789999999999999999999 7799999999999999855 46899999999866422
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||++.+..++.++||||+|+++|+|++|+.||.... .............. ..
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~--~~------- 221 (256)
T cd08220 156 -SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN----LPALVLKIMSGTFA--PI------- 221 (256)
T ss_pred -ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc----hHHHHHHHHhcCCC--CC-------
Confidence 22234568889999999998889999999999999999999999997533 22222222111110 00
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.+|++|||+.|++++
T Consensus 222 ----~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 222 ----SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ----CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 00122357799999999999999999999875
No 267
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.1e-33 Score=305.71 Aligned_cols=248 Identities=26% Similarity=0.380 Sum_probs=197.9
Q ss_pred ceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 808 AVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
++||+|+||.||+|.+.+++.||+|++...... ...+.+.+|++++++++|+||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 468999999999999877999999988754332 3456789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc-cc
Q 001274 888 GEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM-SA 966 (1109)
Q Consensus 888 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-~~ 966 (1109)
.+++..... .+++..+..++.+++.|++||| +.+++||||||+||+++.++.++|+|||.++.......... ..
T Consensus 80 ~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 80 LTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 999976543 3789999999999999999999 77999999999999999999999999999976542111111 12
Q ss_pred cccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhccc
Q 001274 967 IAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRT 1045 (1109)
Q Consensus 967 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
...+..|+|||++.++.++.++||||+||++|||+| |..||..... ......+.. ..... ..
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-~~~~~~~~~----~~~~~------------~~ 217 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-QQTRERIES----GYRMP------------AP 217 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-HHHHHHHhc----CCCCC------------CC
Confidence 234567999999998899999999999999999999 8888865431 111111111 10000 01
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1046 VEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1046 ~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
......+.+++.+||..+|.+||++.|+++.|.
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 112246889999999999999999999999874
No 268
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.7e-33 Score=311.28 Aligned_cols=252 Identities=26% Similarity=0.394 Sum_probs=187.8
Q ss_pred eEecCCcceEEEEEecC---CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 809 VIGRGACGTVYKATLAN---GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
+||+|+||+||+|...+ ...+|+|.+... ........+.+|+++++.++|+||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999997543 346788876532 22334467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC-CC
Q 001274 886 SLGEQLHGNKQT--CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY-SK 962 (1109)
Q Consensus 886 sL~~~l~~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 962 (1109)
+|.+++...... ...++.....++.||+.|++||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999765431 23567788899999999999999 7899999999999999999999999999987543211 11
Q ss_pred CccccccccceeccccccC-------CCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 963 SMSAIAGSYGYIAPEYAYT-------MKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
......+++.|+|||++.. ..++.++||||+||++|||++ |..||....... ........... ...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~~~~~~~~~~~--~~~ 231 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ----VLKQVVREQDI--KLP 231 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH----HHHHHhhccCc--cCC
Confidence 1233456778999998643 456889999999999999999 788887543211 11211111110 000
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.+.. .......+..++..|| .||++|||+++|++.+
T Consensus 232 ~~~~------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 232 KPQL------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCcc------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 0000 1112234667888898 5999999999999886
No 269
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-34 Score=310.92 Aligned_cols=257 Identities=21% Similarity=0.308 Sum_probs=203.9
Q ss_pred HhcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 878 (1109)
....|++.++||.||.+.||++...+.+.||+|++.....+......|.+|+..+.++ .|.+||++++|-..++..|+|
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 3467889999999999999999988889999999987766667778899999999999 599999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||- ..+|.++|.+.... ++.-.++.+.+|++.|+.++| ..||||.||||.|+++-. |.+||+|||.|..+..
T Consensus 439 mE~G-d~DL~kiL~k~~~~--~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSI--DPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred eecc-cccHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 9987 46999999876653 332277889999999999999 789999999999999875 5899999999987764
Q ss_pred CCCC-CccccccccceeccccccCCC-----------CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 959 PYSK-SMSAIAGSYGYIAPEYAYTMK-----------VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 959 ~~~~-~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
+... .....+||+.||+||.+.... .++++||||+||++|+|+.|+.||... ...+.+...-
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~------~n~~aKl~aI 585 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI------INQIAKLHAI 585 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH------HHHHHHHHhh
Confidence 3322 225678999999999886432 567899999999999999999999742 2222222111
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
..|-.++-.+... ...++.++|..|+.+||.+||+..+++++-
T Consensus 586 ~~P~~~Iefp~~~--------~~~~li~~mK~CL~rdPkkR~si~eLLqhp 628 (677)
T KOG0596|consen 586 TDPNHEIEFPDIP--------ENDELIDVMKCCLARDPKKRWSIPELLQHP 628 (677)
T ss_pred cCCCccccccCCC--------CchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence 1121111111111 112378999999999999999999999764
No 270
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.6e-33 Score=314.16 Aligned_cols=265 Identities=25% Similarity=0.357 Sum_probs=200.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..+.||+|+||.||+|+.+ +++.||||+++...........+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999865 689999999875544444456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+. ++|.+++..... ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.+|++|||.++......
T Consensus 81 ~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~- 154 (284)
T cd07860 81 LH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 154 (284)
T ss_pred cc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-
Confidence 96 689888865432 24899999999999999999999 7799999999999999999999999999987654221
Q ss_pred CCccccccccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh-----
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD----- 1035 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1035 (1109)
.......++..|+|||++.+.. ++.++||||||+++|||+||+.||.............+.. ..+....+.
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 231 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL---GTPDEVVWPGVTSL 231 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh---CCCChhhhhhhhHH
Confidence 1223335678899999887654 6889999999999999999999997543222222211110 000000000
Q ss_pred --------hhcchh-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1036 --------KRLDLS-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1036 --------~~~~~~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
+..... ..........+.+++.+||+.||++|||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000 00001112346789999999999999999999875
No 271
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.4e-34 Score=325.52 Aligned_cols=245 Identities=23% Similarity=0.241 Sum_probs=190.0
Q ss_pred EecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccC---CCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 810 IGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKI---RHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
||+|+||+||+|+.. +++.||||++..... .......+..|..++... +||+|+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 689999999864321 112233455677776655 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|.+++..... +++..+..++.||++||+||| +.+|+||||||+||+++.++.++|+|||+++.... .....
T Consensus 81 g~L~~~l~~~~~---~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~-~~~~~ 153 (330)
T cd05586 81 GELFWHLQKEGR---FSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLT-DNKTT 153 (330)
T ss_pred ChHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCC-CCCCc
Confidence 999999876543 899999999999999999999 77999999999999999999999999999875431 12223
Q ss_pred cccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhc
Q 001274 965 SAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAK 1043 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1109)
....||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+............. .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~----~~~~~~~i~~~~~~~~---~-------- 218 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED----TQQMYRNIAFGKVRFP---K-------- 218 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC----HHHHHHHHHcCCCCCC---C--------
Confidence 456799999999998765 48999999999999999999999997532 2222222221111110 0
Q ss_pred ccHHHHHHHHHHHHhccCCCCCCCC----CHHHHHHHHH
Q 001274 1044 RTVEEMTLFLKIALFCSSTSPLNRP----TMREVIAMMI 1078 (1109)
Q Consensus 1044 ~~~~~~~~~~~li~~cl~~dP~~RP----t~~evl~~L~ 1078 (1109)
......+.+++.+||+.||.+|| ++.+++++-+
T Consensus 219 --~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~ 255 (330)
T cd05586 219 --NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPF 255 (330)
T ss_pred --ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcc
Confidence 00123466899999999999998 6778877643
No 272
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.6e-33 Score=310.38 Aligned_cols=259 Identities=24% Similarity=0.385 Sum_probs=204.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCc----EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGE----VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
++|++.+.||+|+||+||+|.++ +++ .||+|...... .......+.+|+.++++++|+||+++++++.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 57888899999999999999864 333 58898876432 23345678899999999999999999999887 7889
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+||||+++|+|.+++...... +++..+..++.||+.|++||| +.+++||||||+||+++.++.+||+|||.++..
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEEecCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 999999999999999875443 899999999999999999999 779999999999999999999999999999876
Q ss_pred cCCCCCC-ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 957 DLPYSKS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 957 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
....... .....++..|+|||.+....++.++||||||+++||+++ |+.||.... ..++............
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~----~~~~~~~~~~~~~~~~--- 232 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP----AVEIPDLLEKGERLPQ--- 232 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC----HHHHHHHHhCCCCCCC---
Confidence 5222111 122234678999999988899999999999999999999 999997543 1222221111110000
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
.......+.+++.+||..+|.+||++.++++.+.++....
T Consensus 233 ----------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 233 ----------PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred ----------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 0011134678999999999999999999999999886543
No 273
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.5e-33 Score=305.60 Aligned_cols=249 Identities=28% Similarity=0.443 Sum_probs=201.5
Q ss_pred ceEecCCcceEEEEEecC----CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEecc
Q 001274 808 AVIGRGACGTVYKATLAN----GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
+.||+|+||.||+|.... +..||+|.++...... ..+.+.+|+++++.++|+||+++++++......++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 468999999999998653 7889999997543332 46788999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCC------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 884 NGSLGEQLHGNKQ------TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 884 ~gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
+++|.+++..... ...+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||.++...
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 9999999987521 134899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 958 LPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 958 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
.... .......++..|+|||.+....++.++||||+|+++|||++ |..||.... ..+.......... .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~----~~~~~~~~~~~~~-~----- 226 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS----NEEVLEYLRKGYR-L----- 226 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC----HHHHHHHHHcCCC-C-----
Confidence 3221 22234567889999999998899999999999999999999 699997642 1222222111110 0
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.........+.+++.+||+.+|++||++.|++++|
T Consensus 227 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 227 -------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred -------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 00111134688999999999999999999999887
No 274
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6.4e-33 Score=314.56 Aligned_cols=196 Identities=28% Similarity=0.467 Sum_probs=159.7
Q ss_pred CceEecCCcceEEEEEec---CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe--CCceEEEEEe
Q 001274 807 GAVIGRGACGTVYKATLA---NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH--QDSNLLLYEY 881 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 881 (1109)
+.+||+|+||+||+|+.+ ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 368999999999999864 35789999886332 23467899999999999999999998854 4567899999
Q ss_pred ccCCCHHHHhccCC------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee----CCCCceEEeecc
Q 001274 882 MENGSLGEQLHGNK------QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL----DEEFQAHVGDFG 951 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG 951 (1109)
++ ++|.+++.... ....+++..+..++.||+.||.||| +.+|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 96 47877764321 1224888999999999999999999 7799999999999999 566799999999
Q ss_pred ccccccCCCC--CCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCc
Q 001274 952 LAKLIDLPYS--KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSL 1010 (1109)
Q Consensus 952 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~ 1010 (1109)
+++....... .......+|+.|+|||++.+. .++.++||||+||++|||+||+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9987643221 122345789999999998764 5899999999999999999999999753
No 275
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=6.7e-33 Score=310.23 Aligned_cols=266 Identities=21% Similarity=0.325 Sum_probs=198.6
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
++++|++.+.||+|+||.||+|+.. +++.||+|++..... ......+.+|+++++.++|+||+++++++..++..++|
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3578999999999999999999864 688999999864432 22334678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+. +++.+++..... .+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred Eeccc-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 99995 678777755433 2788889999999999999999 77999999999999999999999999999975432
Q ss_pred CCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CCchhh--
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PTSELF-- 1034 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 1034 (1109)
.. .......++..|+|||++.+. .++.++||||+||++|||++|+.||++.... .+.+........ +....+
T Consensus 156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 156 PS-QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV---FEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred CC-CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH---HHHHHHHHHHcCCCChhhhhh
Confidence 21 112334578899999998764 5788999999999999999999999754321 111111111000 000000
Q ss_pred --------hhhcchh-------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1035 --------DKRLDLS-------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1035 --------~~~~~~~-------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
....... ..........+.+++.+|+..||++|||+.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000 00001113467799999999999999999999865
No 276
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.1e-33 Score=307.39 Aligned_cols=253 Identities=27% Similarity=0.394 Sum_probs=197.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC---cchhHHHHHHHHHhccCCCCceeeEEEEEEeC--Cce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG---ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 875 (1109)
.+|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999865 5899999988643222 12345788899999999999999999988764 456
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++||||+++++|.+++..... +++....+++.|++.||+||| +.+++|+||||+||+++.++.++|+|||.++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGA---LTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 799999999999999876543 788889999999999999999 77999999999999999999999999999986
Q ss_pred ccCCC--CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 956 IDLPY--SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 956 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
..... ........++..|+|||++.+..++.++|||||||++|||++|+.||..... ... +....... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~-~~~~~~~~--~~~~ 229 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA---MAA-IFKIATQP--TNPV 229 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch---HHH-HHHHhcCC--CCCC
Confidence 53211 1122334688899999999988899999999999999999999999975321 111 11111111 0000
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
........+..++.+|+. +|++||+++|++++-
T Consensus 230 ----------~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 230 ----------LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred ----------CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 112223457788899984 899999999998753
No 277
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.5e-33 Score=307.74 Aligned_cols=256 Identities=24% Similarity=0.389 Sum_probs=204.5
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe--CCceEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH--QDSNLLLY 879 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 879 (1109)
+|++.+.||.|+||.||+|... +++.||+|++..........+.+..|++++++++|+||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778899999999999999854 68899999987655445556778899999999999999999998764 34568999
Q ss_pred EeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcC--CCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 880 EYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDC--RPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
||+++++|.+++.... ....+++..+..++.|+++|++|||..+ +.+++|+||+|+||+++.++.+|++|||.+...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999999999986532 1234899999999999999999999543 568999999999999999999999999999876
Q ss_pred cCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 957 DLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
..... ......++..|+|||++.+..++.++||||||+++|+|++|+.||.... .....+.......+ .
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~--~---- 229 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN----QLQLASKIKEGKFR--R---- 229 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC----HHHHHHHHhcCCCC--C----
Confidence 53221 1234568899999999999889999999999999999999999997543 22222221111110 0
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
........+.+++.+|++.+|++||++.+|+++
T Consensus 230 -------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 230 -------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 011223467899999999999999999999976
No 278
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=342.40 Aligned_cols=261 Identities=26% Similarity=0.407 Sum_probs=212.0
Q ss_pred cCCCCCceEecCCcceEEEEEec----C----CcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA----N----GEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ 872 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 872 (1109)
.+..+.+.+|+|+||.||+|... . ...||||..+..... .+.+.+..|+++|+.+ +|+||+.++|+|...
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 44556679999999999999732 1 457999999855444 6678899999999999 699999999999999
Q ss_pred CceEEEEEeccCCCHHHHhccCC-----CC--------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNK-----QT--------CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL 939 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~-----~~--------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 939 (1109)
+..++|+||++.|+|.++++..+ .. ..++..+...++.|||.||+||+ +.++|||||.++|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEe
Confidence 99999999999999999998776 00 13888999999999999999999 7899999999999999
Q ss_pred CCCCceEEeeccccccccCCCCCCccccc--cccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcH
Q 001274 940 DEEFQAHVGDFGLAKLIDLPYSKSMSAIA--GSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDL 1016 (1109)
Q Consensus 940 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~ 1016 (1109)
..+..+||+|||+|+.............. -+..|||||.+....|+.|+|||||||++|||+| |..||.+.....++
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l 531 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL 531 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH
Confidence 99999999999999965433332222222 4567999999999999999999999999999999 99999874433344
Q ss_pred HHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1017 VTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
.++++...+... +..+..++..+|..||+.+|++||++.++++.+.....
T Consensus 532 ~~~l~~G~r~~~----------------P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 532 LEFLKEGNRMEQ----------------PEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHhcCCCCCC----------------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 444443322221 12223467899999999999999999999999998543
No 279
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.2e-33 Score=311.63 Aligned_cols=261 Identities=28% Similarity=0.388 Sum_probs=204.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-----CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe--CCc
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-----NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH--QDS 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 874 (1109)
++|+..+.||+|+||.||+|++. +++.||||+++..... ...+.+.+|+++++.++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 46778899999999999999853 3688999999744332 346789999999999999999999999887 557
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++||||+++++|.+++..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||.+.
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 8999999999999999987654 3899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCC--CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC----------cHHHHHHH
Q 001274 955 LIDLPYSK--SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGG----------DLVTWVRR 1022 (1109)
Q Consensus 955 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~----------~~~~~~~~ 1022 (1109)
........ ......++..|+|||+..+..++.++||||||+++|||++|+.|+....... .....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 76522111 1112345567999999998899999999999999999999999986532111 00111111
Q ss_pred hhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1023 SIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
....... ..........+.+++.+||+.+|++||+|.||+++|..+
T Consensus 238 ~~~~~~~------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 LLKEGER------------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHcCCc------------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111100 000112235688999999999999999999999999865
No 280
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2e-33 Score=312.89 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=199.7
Q ss_pred HHHHHHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEe-
Q 001274 795 HNLLEATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYH- 871 (1109)
Q Consensus 795 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 871 (1109)
.++....+.|++.+.||+|+||.||+|++. +++.||+|++... ......+..|+.+++++ +|+||+++++++..
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 9 SALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 344455678999999999999999999864 6889999988643 22345688899999998 79999999999853
Q ss_pred -----CCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceE
Q 001274 872 -----QDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAH 946 (1109)
Q Consensus 872 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 946 (1109)
.+..+++|||+++|+|.+++...... .+++..+..++.||+.|++||| +.+++||||+|+||+++.++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEE
Confidence 45679999999999999998764422 3788888999999999999999 77999999999999999999999
Q ss_pred EeeccccccccCCCCCCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHH
Q 001274 947 VGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVR 1021 (1109)
Q Consensus 947 l~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~ 1021 (1109)
|+|||++....... .......++..|+|||++. +..++.++||||+||++|||++|+.||..........
T Consensus 162 l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~---- 236 (282)
T cd06636 162 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF---- 236 (282)
T ss_pred EeeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh----
Confidence 99999987654221 1223456889999999876 3468889999999999999999999997533111111
Q ss_pred HhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1022 RSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.. .... ..... .......+.+++.+||+.||++||++.|++++
T Consensus 237 ~~-~~~~-~~~~~----------~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 237 LI-PRNP-PPKLK----------SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred hH-hhCC-CCCCc----------ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 00 0000 00000 11122468899999999999999999999865
No 281
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3e-33 Score=309.82 Aligned_cols=256 Identities=30% Similarity=0.465 Sum_probs=199.5
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCc--------chhHHHHHHHHHhccCCCCceeeEEEEEEeCC
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGA--------TADNSFLAEISTLGKIRHRNIVKLYGFCYHQD 873 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 873 (1109)
+|...+.||+|+||.||+|... +++.||+|.++...... ...+.+.+|++++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4778889999999999999854 68999999886432111 11346788999999999999999999999999
Q ss_pred ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLA 953 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 953 (1109)
..++||||+++++|.++++... .+++..+..++.||+.|+.||| +.+++||||+|+||+++.++.++++|||.+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999998764 3889999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCCC-ccccccccceeccccccCCC--CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC
Q 001274 954 KLIDLPYSKS-MSAIAGSYGYIAPEYAYTMK--VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 954 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1109)
+......... .....++..|+|||++.... ++.++||||+|+++||+++|+.||..... . ...........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~-~~~~~~~~~~~-- 229 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA---I-AAMFKLGNKRS-- 229 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch---H-HHHHHhhcccc--
Confidence 8654222111 23346788999999987654 88999999999999999999999864321 1 11111111000
Q ss_pred chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1031 SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
...+... ........+.+++.+||..+|++||++++++++
T Consensus 230 ~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 230 APPIPPD------VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CCcCCcc------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0000000 111223467889999999999999999999976
No 282
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.5e-33 Score=308.75 Aligned_cols=256 Identities=25% Similarity=0.421 Sum_probs=200.9
Q ss_pred CCCCCceEecCCcceEEEEEecC--CcEEEEEEeeccCC--------CcchhHHHHHHHHHhcc-CCCCceeeEEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLAN--GEVIAVKKIKLRGE--------GATADNSFLAEISTLGK-IRHRNIVKLYGFCYH 871 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 871 (1109)
+|++.+.||+|+||.||+|+++. ++.+|+|.+..... ......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999764 78899998864321 12233557788888865 799999999999999
Q ss_pred CCceEEEEEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 001274 872 QDSNLLLYEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDF 950 (1109)
Q Consensus 872 ~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 950 (1109)
++..++||||+++++|.+++.... ....+++..+..++.|++.|+.|||+ ..+++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 999999999999999999875421 12248899999999999999999993 257999999999999999999999999
Q ss_pred cccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC
Q 001274 951 GLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 951 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1109)
|.+....... ......++..|+|||++.+..++.++||||||+++|||++|+.||.... ...............
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~ 232 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN----MLSLATKIVEAVYEP 232 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC----HHHHHHHHhhccCCc
Confidence 9998654322 3345568899999999999889999999999999999999999986432 222222211111110
Q ss_pred chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1031 SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.. .......+.+++.+||+.||++||++.|+.++++
T Consensus 233 --~~----------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 233 --LP----------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --CC----------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00 0011235778999999999999999999999875
No 283
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5e-33 Score=312.46 Aligned_cols=268 Identities=25% Similarity=0.338 Sum_probs=202.4
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC---cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG---ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
+|+..+.||+|+||.||+|... +++.||||++...... ......+..|++++++++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999865 6899999999754332 22345677899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+ +|+|.+++..... .+++..+..++.||++||+||| +.+++|+||+|+||+++.++.++|+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~~--~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSI--VLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 8999999976542 3899999999999999999999 78999999999999999999999999999987653
Q ss_pred CCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh-
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK- 1036 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1036 (1109)
.. .......+++.|+|||++.+ ..++.++||||+||++|||++|..||.+........... ..... +....+..
T Consensus 155 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ 230 (298)
T cd07841 155 PN-RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIF-EALGT--PTEENWPGV 230 (298)
T ss_pred CC-ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHH-HHcCC--Cchhhhhhc
Confidence 21 22233456788999998865 457899999999999999999987776533211111111 11000 00000000
Q ss_pred ---------hc--chh-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1037 ---------RL--DLS-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1037 ---------~~--~~~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.. ... ..........+.+++.+||+.+|++|||++|++++-+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~ 286 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286 (298)
T ss_pred ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence 00 000 000112245688999999999999999999999874433
No 284
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.3e-33 Score=313.58 Aligned_cols=251 Identities=27% Similarity=0.368 Sum_probs=200.6
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
.|+..+.||+|+||.||+|.+. +++.||+|.+..... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 3555678999999999999865 578899998864322 23456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++... .+++..+..++.|+++|+.||| +.+++|+||+|+||+++.++.++++|||++...... .
T Consensus 84 ~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~-~ 155 (277)
T cd06642 84 LGGGSALDLLKPG----PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT-Q 155 (277)
T ss_pred cCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCc-c
Confidence 9999999998653 2789999999999999999999 789999999999999999999999999999765421 1
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......++..|+|||++.+..++.++|||||||++|||++|+.||....... .... .....+. .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~~~-~~~~~~~------~---- 220 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR----VLFL-IPKNSPP------T---- 220 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh----HHhh-hhcCCCC------C----
Confidence 12233467889999999999899999999999999999999999987433111 1111 1111000 0
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
........+.+++.+||+.+|++||++.+++++-+-
T Consensus 221 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 256 (277)
T cd06642 221 --LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 256 (277)
T ss_pred --CCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHH
Confidence 011223457799999999999999999999987653
No 285
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5e-33 Score=305.58 Aligned_cols=237 Identities=24% Similarity=0.418 Sum_probs=188.5
Q ss_pred ceEecCCcceEEEEEecCCc-----------EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceE
Q 001274 808 AVIGRGACGTVYKATLANGE-----------VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 876 (1109)
+.||+|+||.||+|.+.+.. .|++|.+.... .....+.+|+.++++++||||+++++++.. +..+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 36899999999999876432 47777765332 125788999999999999999999999988 7789
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-------ceEEee
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-------QAHVGD 949 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-------~~kl~D 949 (1109)
+||||+++|+|.+++..... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+|++|
T Consensus 77 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCC
Confidence 99999999999999987553 3899999999999999999999 78999999999999999888 799999
Q ss_pred ccccccccCCCCCCccccccccceeccccccCC--CCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhc
Q 001274 950 FGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTM--KVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 950 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
||++..... .....++..|+|||++.+. .++.++||||+|+++|||++ |..||..... .....+.. ...
T Consensus 152 fg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-~~~~~~~~--~~~ 223 (259)
T cd05037 152 PGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-SEKERFYQ--DQH 223 (259)
T ss_pred CCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-hhHHHHHh--cCC
Confidence 999986542 2233567789999998876 78999999999999999999 5777765431 11111111 000
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
..+. .....+.+++.+||..+|++||++.++++.|
T Consensus 224 ~~~~----------------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 224 RLPM----------------PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCCC----------------CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0000 0014678999999999999999999999876
No 286
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.8e-33 Score=310.20 Aligned_cols=263 Identities=24% Similarity=0.362 Sum_probs=198.8
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|+||+||+|+.+ +++.||+|.+...... .....+.+|++++++++|+||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 57889999999999999999875 6899999998754322 233457789999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++ +|.+++..... .+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||.++....+.
T Consensus 84 ~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 84 YLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred cCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 9974 99998876543 3889999999999999999999 7899999999999999999999999999987543211
Q ss_pred CCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CCchhhh---
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PTSELFD--- 1035 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--- 1035 (1109)
.......++..|+|||++.+ ..++.++||||+|+++|||++|+.||...... .+.+........ +..+.+.
T Consensus 158 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 158 -KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV---EDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred -ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH---HHHHHHHHHhcCCCChhhhhhhh
Confidence 11122346788999999876 45899999999999999999999999754311 111111111100 0000000
Q ss_pred ---------------hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1036 ---------------KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1036 ---------------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
....... ........+.+++.+|++.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hccccccccccccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000000 001112456799999999999999999999865
No 287
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.5e-33 Score=316.46 Aligned_cols=258 Identities=22% Similarity=0.271 Sum_probs=204.0
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCc-chhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGA-TADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|+..+.||+|+||+||+|+.. +++.||+|.+....... ...+.+.+|++++++++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999875 58999999997543321 24567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++++|.+++..... ..+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQPG-KCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCCC-CccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 99999999999875432 24899999999999999999999 789999999999999999999999999998754321
Q ss_pred CCC----------------------------CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcc
Q 001274 960 YSK----------------------------SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLE 1011 (1109)
Q Consensus 960 ~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~ 1011 (1109)
... ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 100 0112467889999999999899999999999999999999999997543
Q ss_pred cCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCC----HHHHHHHHHH
Q 001274 1012 LGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPT----MREVIAMMID 1079 (1109)
Q Consensus 1012 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt----~~evl~~L~~ 1079 (1109)
..... ............ .......+.+++.+||..+|++||+ ++|++++-+.
T Consensus 237 ~~~~~----~~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~ 292 (316)
T cd05574 237 RDETF----SNILKKEVTFPG------------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292 (316)
T ss_pred hHHHH----HHHhcCCccCCC------------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence 22111 111111111000 1112346889999999999999999 7777776443
No 288
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=347.26 Aligned_cols=257 Identities=31% Similarity=0.422 Sum_probs=209.7
Q ss_pred hcCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
+-+|+...+||.|.||.||.|. ..+|+..|||.++.........+...+|+.++..++|||+|+++|+-.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 4488889999999999999998 557999999999877665666778889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
|||++|+|.+.+...+. .++.....+..|++.|++||| +.|||||||||.||+++.+|.+|.+|||.|+.....
T Consensus 1314 EyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 99999999999976543 566677788999999999999 889999999999999999999999999999987644
Q ss_pred CC---CCccccccccceeccccccCCC---CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 960 YS---KSMSAIAGSYGYIAPEYAYTMK---VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 960 ~~---~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
.. ...+...||+.|||||++.+.. ...++||||+|||+.||+||+.||...+.+=.+...+.. +..|..
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~---gh~Pq~-- 1462 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA---GHKPQI-- 1462 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc---cCCCCC--
Confidence 21 2225678999999999998654 567899999999999999999999865432222222222 222111
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
+.....+..+|+..|+..||++|.++.|++++=..
T Consensus 1463 -----------P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1463 -----------PERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred -----------chhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence 11123456789999999999999999988877543
No 289
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.3e-33 Score=307.67 Aligned_cols=252 Identities=24% Similarity=0.389 Sum_probs=186.2
Q ss_pred eEecCCcceEEEEEecCCc---EEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 809 VIGRGACGTVYKATLANGE---VIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
+||+|+||+||+|+..++. .+++|.++... .....+.+.+|+.+++.++||||+++++++......++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 5899999999999754333 45566654322 2234578999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC-CCCC
Q 001274 886 SLGEQLHGNKQ-TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP-YSKS 963 (1109)
Q Consensus 886 sL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~ 963 (1109)
+|.+++..... ....++..+..++.||+.||+||| +.+++||||||+||+++.++.++|+|||++...... ....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999976432 223667778899999999999999 779999999999999999999999999998643211 1111
Q ss_pred ccccccccceeccccccC-------CCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 964 MSAIAGSYGYIAPEYAYT-------MKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 964 ~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
.....++..|+|||+... ..++.++|||||||++|||++ |..||..... .+.......+.. ....+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~----~~~~~~~~~~~~--~~~~~ 231 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD----REVLNHVIKDQQ--VKLFK 231 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHhhcc--cccCC
Confidence 234567889999998753 245789999999999999997 5668764332 222222111111 11111
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
+... ......+.+++.+|| .+|++||++++|++.|
T Consensus 232 ~~~~------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 232 PQLE------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CccC------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 1111 011235677899999 6799999999999876
No 290
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=315.26 Aligned_cols=255 Identities=24% Similarity=0.342 Sum_probs=214.6
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
.+.|.+.+.||+|.|++|..|++. ++..||||.+....-+......+.+|+++|+.++|||||+++.+.......|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 467889999999999999999865 6999999999877666666666899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+.+|.+.+|+.+++. +.+..+..++.|+..|++|+| ++.|||||||++||+++.+..+||+|||++..+.
T Consensus 135 eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~-- 206 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFD-- 206 (596)
T ss_pred EeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeec--
Confidence 99999999999998876 566888999999999999999 8899999999999999999999999999999886
Q ss_pred CCCCccccccccceeccccccCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKV-TEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.....++.+|++.|.|||++.+.+| ++++|+||+|+++|-|+.|..||++.. +.+.-...+.+..
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~----lk~Lr~rvl~gk~---------- 272 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN----LKELRPRVLRGKY---------- 272 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc----cccccchheeeee----------
Confidence 4555678899999999999999887 579999999999999999999998532 2221111111111
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
....... ..+.+++.+++-.+|.+|++.+++.++-|.-.
T Consensus 273 rIp~~ms----~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 273 RIPFYMS----CDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred cccceee----chhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 1111111 23558999999999999999999998876543
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=6.5e-33 Score=309.04 Aligned_cols=259 Identities=24% Similarity=0.365 Sum_probs=197.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHH-hccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEIST-LGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||.||+|++. +|+.||+|+++..... .....+..|+.+ ++..+||||+++++++..++..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 36888899999999999999875 6999999998754322 233456666665 56678999999999999999999999
Q ss_pred EeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 880 EYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRP-HIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||++ |+|.+++.... ....+++..+..++.||+.|++||| +. +++||||||+||+++.++.+||+|||.++...
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 9996 68888875422 2234899999999999999999999 55 89999999999999999999999999998654
Q ss_pred CCCCCCccccccccceeccccccC----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYT----MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
.. .......++..|+|||++.+ ..++.++||||+||++|||++|+.||..... .. +.+........+. .
T Consensus 156 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~-~~~~~~~~~~~~~--~ 228 (283)
T cd06617 156 DS--VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PF-QQLKQVVEEPSPQ--L 228 (283)
T ss_pred cc--cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CH-HHHHHHHhcCCCC--C
Confidence 21 11223467889999998865 4578899999999999999999999974321 11 1111111111110 0
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
. .......+.+++.+||..+|++||++.+++++-+....
T Consensus 229 ~----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 229 P----------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred C----------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 0 00112457899999999999999999999987655543
No 292
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.3e-33 Score=308.42 Aligned_cols=238 Identities=20% Similarity=0.324 Sum_probs=185.3
Q ss_pred eEecCCcceEEEEEecC-------------------------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCcee
Q 001274 809 VIGRGACGTVYKATLAN-------------------------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIV 863 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 863 (1109)
+||+|+||.||+|.... ...||+|++.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 68999999999997421 1358888885332 22345788999999999999999
Q ss_pred eEEEEEEeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC
Q 001274 864 KLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF 943 (1109)
Q Consensus 864 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~ 943 (1109)
++++++......++||||+++|+|..++..... .+++..+..++.||++||+||| +++|+||||||+||+++..+
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLG 154 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccC
Confidence 999999999999999999999999999876443 3889999999999999999999 78999999999999997643
Q ss_pred -------ceEEeeccccccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHH-hCCCCCCCcccCC
Q 001274 944 -------QAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELI-TGKSPVQSLELGG 1014 (1109)
Q Consensus 944 -------~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~ell-tg~~pf~~~~~~~ 1014 (1109)
.++++|||.+..... .....++..|+|||++.+ ..++.++|||||||++|||+ +|+.||.......
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~-----~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALS-----REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cccCccceeeecCCcccccccc-----ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 489999998864321 122356788999998875 56899999999999999995 6999987543211
Q ss_pred cHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1015 DLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
....... .....+ .....+.+++.+||+.+|++||+|.++++.|
T Consensus 230 -~~~~~~~----~~~~~~--------------~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 -KERFYEK----KHRLPE--------------PSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred -HHHHHHh----ccCCCC--------------CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1111111 110000 0112477899999999999999999999876
No 293
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.5e-33 Score=319.55 Aligned_cols=266 Identities=23% Similarity=0.299 Sum_probs=202.4
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD----- 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 873 (1109)
..++|+..+.||+|+||.||+|+.. +++.||+|++..........+.+.+|+.++++++|+||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3478999999999999999999865 7899999998644333444567788999999999999999999886543
Q ss_pred -ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 874 -SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 874 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
..++||||+. ++|.+++... +++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||.
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 4689999996 5888877542 788899999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhcc-CCCc
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEM-VPTS 1031 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 1031 (1109)
++..... .......++..|+|||++.+..++.++||||+||++|+|++|+.||........ ........ .+..
T Consensus 165 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~ 238 (353)
T cd07850 165 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ----WNKIIEQLGTPSD 238 (353)
T ss_pred ceeCCCC--CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHHhcCCCCH
Confidence 9865422 223345678899999999999999999999999999999999999975431111 11111000 0000
Q ss_pred h--------------------------hhhhhcchh--hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1032 E--------------------------LFDKRLDLS--AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1032 ~--------------------------~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
+ .+....... ..........+.+++.+|++.||++|||+.|++++-+-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 0 000000000 000112345678999999999999999999999886544
No 294
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.9e-33 Score=307.59 Aligned_cols=256 Identities=28% Similarity=0.422 Sum_probs=206.9
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..+.||+|+||.||+|.++ +++.||+|.+..... ....+.+.+|++++++++||||+++++++...+..++|+||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 5777889999999999999876 689999999875432 24556789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCC-CCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCR-PHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
+++++|.+++..... .+++..+.+++.|++.|++|+| + .+++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 81 MDGGSLDKILKEVQG--RIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred cCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 999999999976532 3889999999999999999999 6 799999999999999999999999999987654221
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcc-cCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLE-LGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
. ....++..|+|||++.+..++.++||||+|+++|+|++|+.||.... ......+.++.......+.. .
T Consensus 156 ~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~----- 225 (265)
T cd06605 156 A---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRL--P----- 225 (265)
T ss_pred h---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCC--C-----
Confidence 1 12568889999999999999999999999999999999999997542 11223333333222211110 0
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......+.+++.+||..+|++|||+.+++.+-+.
T Consensus 226 -----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 226 -----SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred -----hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 00023457899999999999999999999987554
No 295
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=8e-33 Score=305.63 Aligned_cols=255 Identities=23% Similarity=0.400 Sum_probs=201.8
Q ss_pred CCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCC----cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 803 NFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEG----ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
+|+..+.||+|+||.||+|+. .+++.||+|++...... ....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999985 47899999998743321 1234678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeeccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-QAHVGDFGLAKLI 956 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~ 956 (1109)
||||+++++|.+++..... +++..+..++.|++.|+.||| +.+++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 9999999999999976543 889999999999999999999 78999999999999998776 5999999999766
Q ss_pred cCCCCC---CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 957 DLPYSK---SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 957 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
...... ......++..|+|||++.+..++.++||||+|+++|+|++|..||........ ...+........ ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~-~~-- 230 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIFKIASATT-AP-- 230 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHHHHhccCC-CC--
Confidence 432111 11234678899999999888899999999999999999999999974332211 122211111110 00
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.........+.+++.+|++.+|++||++.+++++
T Consensus 231 ---------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 231 ---------SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred ---------CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 0111223457789999999999999999999865
No 296
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=7.3e-33 Score=303.31 Aligned_cols=247 Identities=27% Similarity=0.448 Sum_probs=197.9
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
++|++.+.||+|+||.||+|.. +++.||+|+++.. ...+.+.+|+.++++++|||++++++++... ..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 4688899999999999999975 5788999998632 2346788999999999999999999998654 57999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||.+......
T Consensus 80 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 80 MSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-- 153 (254)
T ss_pred CCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence 999999999976543 23789999999999999999999 789999999999999999999999999998754321
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
......+..|+|||++.+..++.++||||+|+++|||++ |+.||.... ..+........ .... .
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~----~~~~~~~~~~~-~~~~-~------- 218 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS----LKEVKECVEKG-YRME-P------- 218 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC----HHHHHHHHhCC-CCCC-C-------
Confidence 122344678999999998899999999999999999998 999987543 22222211111 1000 0
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......+.+++.+||+.+|++||+++++++.+++
T Consensus 219 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 ----PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11122457799999999999999999999998753
No 297
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.4e-33 Score=313.47 Aligned_cols=253 Identities=24% Similarity=0.400 Sum_probs=199.8
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
|.....||+|+||.||++... ++..||||++.... ....+.+.+|+.+++.++|+||+++++.+..++..++||||+
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 333467999999999999864 68899999986432 234567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
++++|.+++... .+++..+..++.||+.|++||| +.+|+||||||+||+++.++.++|+|||++...... ..
T Consensus 102 ~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-~~ 173 (292)
T cd06658 102 EGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE-VP 173 (292)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc-cc
Confidence 999999988543 2789999999999999999999 779999999999999999999999999998765422 12
Q ss_pred CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhh
Q 001274 963 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSA 1042 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1109)
......++..|+|||++.+..++.++||||+|+++|||++|+.||..... ...+....... +. . ..
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~~~~~~~~~~~-~~--~----~~--- 239 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP----LQAMRRIRDNL-PP--R----VK--- 239 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhcC-CC--c----cc---
Confidence 22345688999999999988999999999999999999999999874321 11111111111 00 0 00
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1043 KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1043 ~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
........+..++.+||..||++|||+++++++-+...
T Consensus 240 -~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 240 -DSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred -cccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 01112235778999999999999999999998755443
No 298
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5.6e-33 Score=308.02 Aligned_cols=255 Identities=27% Similarity=0.405 Sum_probs=200.2
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCC----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQD---- 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~---- 873 (1109)
.+++|++.+.||+|+||+||+|+.+ +++.||+|++.... ...+.+.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 4578999999999999999999975 67899999987432 2456788999999999 7999999999997654
Q ss_pred --ceEEEEEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 001274 874 --SNLLLYEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDF 950 (1109)
Q Consensus 874 --~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 950 (1109)
..++||||+++++|.+++.... ....+++..+..++.|+++|+.||| +.+++|+||+|+||+++.++.++++||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCC
Confidence 3799999999999999986533 1234899999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCCCCCccccccccceeccccccC-----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhh
Q 001274 951 GLAKLIDLPYSKSMSAIAGSYGYIAPEYAYT-----MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIH 1025 (1109)
Q Consensus 951 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~ 1025 (1109)
|.+...... ........++..|+|||++.. ..++.++||||+||++|+|++|+.||........... ...
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~ 232 (275)
T cd06608 158 GVSAQLDST-LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFK----IPR 232 (275)
T ss_pred ccceecccc-hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHH----hhc
Confidence 998765422 222234568899999998753 3477899999999999999999999975322111111 111
Q ss_pred ccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1026 EMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
... ... .........+.+++.+||..||++|||+.|++++
T Consensus 233 ~~~--~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 233 NPP--PTL---------KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred cCC--CCC---------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 110 000 0111233467899999999999999999999875
No 299
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.1e-32 Score=305.43 Aligned_cols=257 Identities=25% Similarity=0.371 Sum_probs=199.2
Q ss_pred CCCCceEecCCcceEEEEEec----CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC------
Q 001274 804 FSEGAVIGRGACGTVYKATLA----NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD------ 873 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 873 (1109)
|.+.+.||+|+||+||+|.+. +++.||||+++.........+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999753 3688999999765444455677899999999999999999999886543
Q ss_pred ceEEEEEeccCCCHHHHhccCC---CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeec
Q 001274 874 SNLLLYEYMENGSLGEQLHGNK---QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDF 950 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 950 (1109)
..++++||+++|+|.+++.... ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 2368899999999998875321 1224788999999999999999999 779999999999999999999999999
Q ss_pred cccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccC
Q 001274 951 GLAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMV 1028 (1109)
Q Consensus 951 G~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 1028 (1109)
|.++....... .......++..|++||......++.++||||+|+++|||++ |+.||.+... .+..........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~----~~~~~~~~~~~~ 233 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN----SEIYNYLIKGNR 233 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH----HHHHHHHHcCCc
Confidence 99986542211 11123345678999999998889999999999999999999 8888875321 111111111110
Q ss_pred CCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1029 PTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.. ........+.+++.+||+.+|++||++.++++.|+.+
T Consensus 234 -~~------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 -LK------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -CC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0011224688999999999999999999999999865
No 300
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=7.2e-33 Score=312.72 Aligned_cols=271 Identities=28% Similarity=0.365 Sum_probs=202.6
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--CceEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSNLL 877 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 877 (1109)
.++|++.+.||+|+||.||+|++. +|+.||+|+++...........+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357899999999999999999865 689999999975543333344567899999999999999999998765 45799
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||||++ ++|.+++..... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.+....
T Consensus 86 v~e~~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCE-QDLASLLDNMPT--PFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCC-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999996 488888876433 3899999999999999999999 7799999999999999999999999999998765
Q ss_pred CCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh-
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD- 1035 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1035 (1109)
... .......++..|+|||++.+ ..++.++||||+||++|||++|+.||.+......... +...... +....+.
T Consensus 160 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~-~~~~~~~--~~~~~~~~ 235 (309)
T cd07845 160 LPA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDL-IIQLLGT--PNESIWPG 235 (309)
T ss_pred Ccc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhcCC--CChhhchh
Confidence 321 22233345788999998875 4578999999999999999999999975432111111 1111000 0000000
Q ss_pred --------------hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1036 --------------KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1036 --------------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
................+.+++.+|++.||++|||+.|++++-+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0000000000112345778999999999999999999999877653
No 301
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.6e-32 Score=302.41 Aligned_cols=254 Identities=28% Similarity=0.467 Sum_probs=208.2
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.+.||+|++|.||+|+.. +++.||||++...... ...+.+.+|++++++++|+|++++++++...+..++||||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 6788899999999999999876 5899999998754332 4467899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCC-CCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCR-PHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
+++++|.+++.... .+++..+..++.|+++|++||| + .+++||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKVG---KIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 99999999997653 3899999999999999999999 7 899999999999999999999999999998664222
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ....+..........+. .
T Consensus 155 -~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~---~------ 223 (264)
T cd06623 155 -DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-PSFFELMQAICDGPPPS---L------ 223 (264)
T ss_pred -CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-cCHHHHHHHHhcCCCCC---C------
Confidence 122245678899999999999999999999999999999999999976532 12233333222221110 0
Q ss_pred hhcccHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1041 SAKRTVE-EMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1041 ~~~~~~~-~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
... ....+.+++.+||+.+|++||++.+++++-+
T Consensus 224 ----~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~ 258 (264)
T cd06623 224 ----PAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPF 258 (264)
T ss_pred ----CcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHH
Confidence 111 2346789999999999999999999998743
No 302
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4e-33 Score=312.49 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=200.0
Q ss_pred CCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 806 EGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 806 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
....||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 3457999999999999865 689999999864432 2346688999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
++|..++... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++....... ...
T Consensus 103 ~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~ 174 (297)
T cd06659 103 GALTDIVSQT----RLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKR 174 (297)
T ss_pred CCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccc
Confidence 9999987542 2889999999999999999999 7899999999999999999999999999987554221 222
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....++..|+|||++.+..++.++||||+||++|||++|+.||..... .+.+........+....
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~----------- 239 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP----VQAMKRLRDSPPPKLKN----------- 239 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhccCCCCccc-----------
Confidence 345688999999999998999999999999999999999999974321 11111111111000000
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.......+.+++.+||+.+|++||++.+++++-+...
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~ 276 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQ 276 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhcc
Confidence 0111235778999999999999999999999865543
No 303
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=9.5e-33 Score=308.71 Aligned_cols=249 Identities=22% Similarity=0.274 Sum_probs=203.5
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999865 689999999864322 1233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++++|.+++..... +++..+..++.|+++||.||| +.+++||||+|+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSGR---FPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 99999999999977643 899999999999999999999 789999999999999999999999999999865422
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.....+++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... .............+...
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~------- 219 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN----PIQIYEKILEGKVRFPS------- 219 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCccCCc-------
Confidence 234468899999999988889999999999999999999999997533 11112221121111111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHH
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMI 1078 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~ 1078 (1109)
.....+.+++.+||..+|.+|+ +++|++++-+
T Consensus 220 -------~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~ 256 (290)
T cd05580 220 -------FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256 (290)
T ss_pred -------cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcc
Confidence 1123567899999999999999 8888887754
No 304
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=6.9e-33 Score=310.02 Aligned_cols=254 Identities=25% Similarity=0.370 Sum_probs=203.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|.+.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++|+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 68889999999999999999854 68899999986432 2234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++.... +++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~~~~----l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 97 YLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred cCCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 999999999987542 788999999999999999999 7899999999999999999999999999987654221
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......+++.|+|||++.+..++.++||||||+++|++++|+.||......... ........+. +.
T Consensus 170 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~----~~~~~~~~~~---~~----- 236 (293)
T cd06647 170 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----YLIATNGTPE---LQ----- 236 (293)
T ss_pred -cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe----eehhcCCCCC---CC-----
Confidence 2223346888999999998888999999999999999999999999753321111 1000000000 00
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
........+.+++.+||+.+|++||++.+++.+-+..
T Consensus 237 ---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~ 273 (293)
T cd06647 237 ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (293)
T ss_pred ---CccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence 0111223577899999999999999999999986553
No 305
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.2e-32 Score=310.64 Aligned_cols=253 Identities=29% Similarity=0.438 Sum_probs=200.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
.+|+..+.||+|+||+||+|+.. +++.||+|++...... ....+.+.+|+++++.++||||+++.+++...+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 46888899999999999999865 6899999998644322 233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||++ |++.+++..... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~- 167 (307)
T cd06607 95 EYCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP- 167 (307)
T ss_pred HhhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCC-
Confidence 9996 577777754333 3899999999999999999999 77999999999999999999999999999875431
Q ss_pred CCCCccccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh
Q 001274 960 YSKSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
.....++..|+|||++. ...++.++||||||+++|||++|+.||.... .............+. .
T Consensus 168 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~----~~~~~~~~~~~~~~~--~--- 234 (307)
T cd06607 168 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----AMSALYHIAQNDSPT--L--- 234 (307)
T ss_pred ----CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc----HHHHHHHHhcCCCCC--C---
Confidence 12346788999999874 4568899999999999999999999987532 111111111111100 0
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
........+.+++.+||+.+|++||++.+++.+.+...
T Consensus 235 -------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 235 -------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred -------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 01123346889999999999999999999998866543
No 306
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.8e-33 Score=310.48 Aligned_cols=265 Identities=25% Similarity=0.323 Sum_probs=200.8
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--CceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 878 (1109)
++|++.+.||+|+||.||+|.++ +++.||+|.++...........+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 47888899999999999999976 588999999975544333345677899999999999999999998877 789999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||++ ++|.+++..... .+++..+..++.||+.||+||| +.+++|+||||+||+++.++.++|+|||.++....
T Consensus 85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 599998876543 3899999999999999999999 77999999999999999999999999999987653
Q ss_pred CCCCCccccccccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh--
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD-- 1035 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1035 (1109)
.. .......+++.|+|||++.+.. ++.++||||+|+++|||++|+.||............. ..... +....+.
T Consensus 159 ~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ 234 (293)
T cd07843 159 PL-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIF-KLLGT--PTEKIWPGF 234 (293)
T ss_pred Cc-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-HHhCC--CchHHHHHh
Confidence 22 2223345788999999887654 6899999999999999999999997543211111111 10000 0000000
Q ss_pred -------------hhcch-hhcccHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1036 -------------KRLDL-SAKRTVE-EMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1036 -------------~~~~~-~~~~~~~-~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
..... ....... ....+.+++.+||+.+|++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 235 SELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000 0000000 24457799999999999999999999875
No 307
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1e-32 Score=310.71 Aligned_cols=254 Identities=21% Similarity=0.252 Sum_probs=198.2
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+|++.+.||+|+||.||+++.. .++.||+|.+...... ......+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6888899999999999999865 5789999998744221 2234578899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++..... +++..+..++.|++.|+.||| +.+++||||||+||+++.++.++++|||.++......
T Consensus 82 ~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 82 YVEGGDCATLLKNIGA---LPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred cCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999976543 899999999999999999999 7799999999999999999999999999986421110
Q ss_pred CC--------------CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 961 SK--------------SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 961 ~~--------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
.. ......++..|+|||++.+..++.++||||||+++|||++|+.||.+.. ..++.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~----~~~~~~~~~~~ 231 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT----PEELFGQVISD 231 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhc
Confidence 00 0112457889999999998899999999999999999999999997432 22333322222
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
..+.... .......+.+++.+||+.+|++||++.++.+.+
T Consensus 232 ~~~~~~~-----------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 232 DIEWPEG-----------DEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred ccCCCCc-----------cccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 1111000 001223567999999999999999954444443
No 308
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.2e-32 Score=307.03 Aligned_cols=265 Identities=24% Similarity=0.396 Sum_probs=201.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.++||+|++|+||+|+.. +++.||||+++.... ......+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 4788899999999999999975 689999999975432 23345677899999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++ +|.+++........+++..+..++.|++.|++||| +.+++||||||+||++++++.++++|||.++......
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~- 154 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV- 154 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-
Confidence 985 89888876554345899999999999999999999 7799999999999999999999999999997654221
Q ss_pred CCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh------
Q 001274 962 KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF------ 1034 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 1034 (1109)
.......++..|+|||++.+. .++.++||||+||++|||++|+.||.+....+......... . .+....+
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~ 231 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM-G--TPTESTWPGISQL 231 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh-C--CCChhhHHHHhcC
Confidence 122334578899999988664 47899999999999999999999997543222111111110 0 0000000
Q ss_pred ---hhhcch----h-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1035 ---DKRLDL----S-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1035 ---~~~~~~----~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
...... . ..........+.+++.+|++.||++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 0 00011223567899999999999999999999865
No 309
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2e-32 Score=300.44 Aligned_cols=252 Identities=31% Similarity=0.463 Sum_probs=200.0
Q ss_pred CCCCceEecCCcceEEEEEecC-----CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 804 FSEGAVIGRGACGTVYKATLAN-----GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
+++.+.||.|+||.||+|++.+ +..||+|+++... .....+.+..|+++++.++|+||+++++++...+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 3567899999999999998653 3889999986432 222567889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+++++|.+++...... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||.+.....
T Consensus 80 ~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 9999999999999764432 2799999999999999999999 78999999999999999999999999999986653
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
..........++..|+|||.+.+..++.++||||+|+++|||++ |+.||.... ................
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~----~~~~~~~~~~~~~~~~------ 225 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS----NEEVLEYLKKGYRLPK------ 225 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHhcCCCCCC------
Confidence 32211112336789999999988889999999999999999999 788886522 2222222111111000
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.......+.+++.+|++.+|++|||+.|+++.|
T Consensus 226 -------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 -------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011234678899999999999999999998764
No 310
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3e-33 Score=307.12 Aligned_cols=239 Identities=21% Similarity=0.368 Sum_probs=186.4
Q ss_pred ceEecCCcceEEEEEecC--------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 808 AVIGRGACGTVYKATLAN--------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
+.||+|+||.||+|.... ...||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 368999999999997542 2348888775322 233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc--------eEEeecc
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQ--------AHVGDFG 951 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~DFG 951 (1109)
||+++|+|.++++..+. .+++..+..++.||+.|++||| +++|+||||||+||+++.++. ++++|||
T Consensus 79 e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 79 EYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred ecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 99999999999986554 3899999999999999999999 789999999999999987765 6999999
Q ss_pred ccccccCCCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCC-CCCCCcccCCcHHHHHHHhhhccCC
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGK-SPVQSLELGGDLVTWVRRSIHEMVP 1029 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~ 1029 (1109)
.+..... .....++..|+|||++.+. .++.++||||+||++|||++|. .||..... ...... ......
T Consensus 154 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~----~~~~~~-~~~~~~ 223 (258)
T cd05078 154 ISITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS----QKKLQF-YEDRHQ 223 (258)
T ss_pred cccccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH----HHHHHH-HHcccc
Confidence 8875431 2234678889999999864 5799999999999999999985 55543221 111110 011000
Q ss_pred CchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1030 TSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
. .......+.+++.+||+.+|++|||++++++.|
T Consensus 224 ~--------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 224 L--------------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred C--------------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 001113578999999999999999999999886
No 311
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.6e-33 Score=304.80 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=203.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|+..+.||+|+||.||+|..+ ++..||+|.+..........+.+.+|++++++++|+||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999865 588999999876543334556788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeeccccccccCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-QAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~~~ 960 (1109)
+++++|.+++..... ..+++..+..++.|+++|++||| +.+++|+||||+||++++++ .++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999999976443 23789999999999999999999 77999999999999999886 46999999998664221
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......|++.|+|||+..+..++.++||||+|+++|||++|+.||.... ..+++........+. .
T Consensus 157 -~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~--~------- 222 (257)
T cd08225 157 -ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN----LHQLVLKICQGYFAP--I------- 222 (257)
T ss_pred -ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHhcccCCC--C-------
Confidence 12233458889999999988889999999999999999999999987432 233333222221110 0
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.+|++|||+.|++++
T Consensus 223 ----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 223 ----SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ----CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11112357799999999999999999999875
No 312
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-32 Score=306.91 Aligned_cols=264 Identities=26% Similarity=0.334 Sum_probs=202.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC--ceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD--SNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 878 (1109)
++|+..+.||.|++|.||+|.+. +++.||+|.+..... ......+.+|++++++++||||+++++++.... ..++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 36778899999999999999975 688999998874322 234567899999999999999999999986543 57899
Q ss_pred EEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 879 YEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
|||+++++|.+++.... ....+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999998875422 1223788999999999999999999 7799999999999999999999999999987553
Q ss_pred CCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccC-CcHHHHHHHhhhccCCCchhhhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELG-GDLVTWVRRSIHEMVPTSELFDK 1036 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1109)
.. ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ....+.......... ... ..
T Consensus 157 ~~---~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~ 230 (287)
T cd06621 157 NS---LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN--PEL-KD 230 (287)
T ss_pred cc---ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc--hhh-cc
Confidence 21 112345788899999999999999999999999999999999999864221 111222221111010 000 00
Q ss_pred hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1037 RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
. ..........+.+++.+||+.+|++|||+.|++++-+-
T Consensus 231 ~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 231 E----PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred C----CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 0 00011123467899999999999999999999987654
No 313
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.5e-32 Score=304.93 Aligned_cols=251 Identities=26% Similarity=0.367 Sum_probs=201.1
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
-|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 3667889999999999999864 688999998864322 23456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++... .+++..+..++.+++.|+.||| +.+++|+||+|+||+++.++.++++|||++...... .
T Consensus 84 ~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~-~ 155 (277)
T cd06641 84 LGGGSALDLLEPG----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-Q 155 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccc-h
Confidence 9999999998653 2789999999999999999999 789999999999999999999999999998765421 1
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......++..|+|||++.+..++.++||||+||++|+|++|..||..... ............+ .+
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~---~~------- 221 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP----MKVLFLIPKNNPP---TL------- 221 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch----HHHHHHHhcCCCC---CC-------
Confidence 122334678899999999988899999999999999999999999875321 1111111111100 00
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.......+.+++.+||+.+|++||++.+++++-+-
T Consensus 222 ---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 256 (277)
T cd06641 222 ---EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 256 (277)
T ss_pred ---CcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence 11122457789999999999999999999997433
No 314
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=317.56 Aligned_cols=274 Identities=25% Similarity=0.304 Sum_probs=212.4
Q ss_pred CCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC------ce
Q 001274 803 NFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD------SN 875 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 875 (1109)
-|...+.||+|+||.||+|+. +.|+.||||.+.... .....+...+|++++++++|+|||+++++-.... ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 455667899999999999994 579999999997654 3445677889999999999999999998755433 56
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC--CCC--ceEEeecc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD--EEF--QAHVGDFG 951 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~kl~DFG 951 (1109)
.+|||||.+|||+..+..-...+.+++.+.+.+..+++.||.||| +.+|+||||||.||++- .+| .-||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 899999999999999988777778999999999999999999999 77999999999999993 334 47999999
Q ss_pred ccccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhcc-CC
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEM-VP 1029 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~ 1029 (1109)
.|+..+. .......+||..|.+||++.. +.|+..+|.|||||++||.+||..||..........+.+....... .+
T Consensus 170 ~Arel~d--~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 170 AARELDD--NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ccccCCC--CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 9998763 345678899999999999984 8899999999999999999999999987664433222222211111 11
Q ss_pred Cchhhh----------hhcchhhcccHHHHHHHHHHHHhccCCCCCCCC--CHHHHHHHHHHhhh
Q 001274 1030 TSELFD----------KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRP--TMREVIAMMIDARQ 1082 (1109)
Q Consensus 1030 ~~~~~~----------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP--t~~evl~~L~~~~~ 1082 (1109)
...... ..+.............+.+.+..++.++|++|- .+.+....+.+++.
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 111111 112222334455566788888889999999998 66666666666544
No 315
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8e-34 Score=316.39 Aligned_cols=251 Identities=26% Similarity=0.416 Sum_probs=199.4
Q ss_pred CCceEecCCcceEEEEEec-CCcEEEEEEeecc--CCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc--eEEEEE
Q 001274 806 EGAVIGRGACGTVYKATLA-NGEVIAVKKIKLR--GEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS--NLLLYE 880 (1109)
Q Consensus 806 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e 880 (1109)
...+||+|+|-+||+|.+. +|-.||=-.++.+ .......+.|..|+.+++.|+||||++++.++.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3468999999999999875 5777763222222 2334445889999999999999999999999988765 568999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-CCceEEeeccccccccCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE-EFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~~ 959 (1109)
.|..|+|..|+++.+. ++.+.+..|+.||++||.|||++ .++|||||||-+||+|++ .|.|||+|+|+|......
T Consensus 124 L~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred cccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 9999999999998876 88999999999999999999988 889999999999999965 589999999999976532
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
......|||.|||||++. ..|++.+||||||++++||+|+..||..-. ...+.-++...+..| . .+.+.-
T Consensus 200 ---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~---n~AQIYKKV~SGiKP-~-sl~kV~- 269 (632)
T KOG0584|consen 200 ---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT---NPAQIYKKVTSGIKP-A-ALSKVK- 269 (632)
T ss_pred ---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC---CHHHHHHHHHcCCCH-H-HhhccC-
Confidence 223478999999999877 789999999999999999999999997432 223333333333322 1 111111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..++.+||.+|+.. .+.|||+.|++.+-...
T Consensus 270 ---------dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~ 300 (632)
T KOG0584|consen 270 ---------DPEVREFIEKCLAT-KSERLSAKELLKDPFFD 300 (632)
T ss_pred ---------CHHHHHHHHHHhcC-chhccCHHHHhhChhhc
Confidence 13577999999999 99999999999775443
No 316
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.4e-32 Score=303.99 Aligned_cols=250 Identities=28% Similarity=0.445 Sum_probs=194.9
Q ss_pred ceEecCCcceEEEEEecC-------CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 808 AVIGRGACGTVYKATLAN-------GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+.||+|+||.||+|+..+ ++.||||.+... ........+.+|+++++.++||||+++++++...+..++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 368999999999998642 257899988633 222345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCC----CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-----ceEEeecc
Q 001274 881 YMENGSLGEQLHGNK----QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-----QAHVGDFG 951 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~DFG 951 (1109)
|+++++|.+++.... ....+++..+..++.|++.|++||| +.+++|+||||+||+++.++ .++++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999999999997532 1223788999999999999999999 77999999999999999887 89999999
Q ss_pred ccccccCCCC-CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCC
Q 001274 952 LAKLIDLPYS-KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVP 1029 (1109)
Q Consensus 952 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 1029 (1109)
+++....... .......++..|+|||++.++.++.++|||||||++|||++ |+.||..... .+..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~----~~~~~~~~~~~~- 231 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN----QEVLQHVTAGGR- 231 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH----HHHHHHHhcCCc-
Confidence 9975532211 11122345678999999999999999999999999999998 9999874321 111111111100
Q ss_pred CchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1030 TSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
. . ........+.+++.+||..+|++||++.++++.|.
T Consensus 232 ~--------~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 232 L--------Q----KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred c--------C----CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 0 01112346789999999999999999999999885
No 317
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1e-32 Score=309.37 Aligned_cols=267 Identities=21% Similarity=0.298 Sum_probs=198.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCc-----
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDS----- 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 874 (1109)
++|+..+.||+|+||.||+|++. +++.||+|+++...........+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999865 6899999998755433334467889999999995 6999999999987665
Q ss_pred eEEEEEeccCCCHHHHhccCCC--CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-CCceEEeecc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQ--TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE-EFQAHVGDFG 951 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG 951 (1109)
.++||||+++ ++.+++..... ...+++..+..++.||+.||.||| +++|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 89888865432 234899999999999999999999 789999999999999998 8999999999
Q ss_pred ccccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1109)
.++...... .......+++.|+|||++.+ ..++.++||||+|+++|||++|..||.+.............. ..+.
T Consensus 157 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~---~~~~ 232 (295)
T cd07837 157 LGRAFSIPV-KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL---GTPT 232 (295)
T ss_pred cceecCCCc-cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh---CCCC
Confidence 998654221 11223356788999998865 457999999999999999999999997533211111111110 0011
Q ss_pred chhhhhhc-----------c-hh-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1031 SELFDKRL-----------D-LS-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1031 ~~~~~~~~-----------~-~~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
...+.... . .. ..........+.+++.+||+.+|++||++.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 11100000 0 00 00011233557899999999999999999999876
No 318
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-33 Score=330.96 Aligned_cols=275 Identities=20% Similarity=0.191 Sum_probs=192.4
Q ss_pred HhcCCCCCceEecCCcceEEEEEecC--CcEEEEEEee---------------ccCCCcchhHHHHHHHHHhccCCCCce
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLAN--GEVIAVKKIK---------------LRGEGATADNSFLAEISTLGKIRHRNI 862 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~---------------~~~~~~~~~~~~~~E~~~l~~l~h~ni 862 (1109)
..++|++.++||+|+||+||+|..+. +..+++|.+. ...........+.+|++++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34789999999999999999987542 2222222110 001112234568899999999999999
Q ss_pred eeEEEEEEeCCceEEEEEeccCCCHHHHhccCCC--CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC
Q 001274 863 VKLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQ--TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD 940 (1109)
Q Consensus 863 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~ 940 (1109)
+++++++...+..|+|+|++. +++.+++..... ........+..++.||+.||+||| +++||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 999999999999999999995 577777754321 112345667789999999999999 78999999999999999
Q ss_pred CCCceEEeeccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHH
Q 001274 941 EEFQAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWV 1020 (1109)
Q Consensus 941 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~ 1020 (1109)
.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|..++............
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~- 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL- 380 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH-
Confidence 9999999999999876533333334567999999999999999999999999999999999987654322211111111
Q ss_pred HHhhhc------cCCC--chhhhhhcch----hhcc------cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1021 RRSIHE------MVPT--SELFDKRLDL----SAKR------TVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1021 ~~~~~~------~~~~--~~~~~~~~~~----~~~~------~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
...... ..+. ...++..... .... .......+.+++.+|++.||.+|||+.|++++-+.
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 111110 0000 0000000000 0000 00112346678999999999999999999987554
No 319
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8.5e-33 Score=308.11 Aligned_cols=264 Identities=24% Similarity=0.361 Sum_probs=200.3
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
|++.++||.|++|+||+|++. +|+.||+|++..........+.+.+|++++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999865 7999999999755433334467889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
+ ++|.+++..... ..+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++|+|||.++...... .
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-R 154 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-c
Confidence 5 699999876552 23899999999999999999999 7799999999999999999999999999997654221 1
Q ss_pred CccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh-----
Q 001274 963 SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK----- 1036 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1036 (1109)
......++..|+|||++.+. .++.++||||+|+++|||++|+.||.............+.. ..+....+..
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTL---GTPDEDVWPGVTSLP 231 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh---CCCChHHhhhhhhch
Confidence 12233568899999988764 57899999999999999999999997543222222221110 0000000000
Q ss_pred ----hc-ch----hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1037 ----RL-DL----SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1037 ----~~-~~----~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.. .. ...........+.+++.+|++.+|++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 00 000011122457799999999999999999999865
No 320
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.5e-32 Score=309.32 Aligned_cols=268 Identities=29% Similarity=0.370 Sum_probs=201.8
Q ss_pred HHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC----
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD---- 873 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 873 (1109)
...++|++.+.||+|+||.||+|..+ +++.||+|+++...........+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578999999999999999999975 5899999999765443344567788999999999999999999987654
Q ss_pred ------ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 001274 874 ------SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHV 947 (1109)
Q Consensus 874 ------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 947 (1109)
..++|+||+++ ++..++..... .+++..+..++.||+.||+||| +.+|+||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLV--HFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEe
Confidence 68999999976 77777765432 3899999999999999999999 779999999999999999999999
Q ss_pred eeccccccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 948 GDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 948 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
+|||.+...............++..|+|||++.+ ..++.++||||+||++|||++|+.||........... +......
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~-~~~~~~~ 236 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL-ISRLCGS 236 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCC
Confidence 9999998765333222233456788999998765 3578999999999999999999999975332211111 1111111
Q ss_pred cCCC--chhh--------h------hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1027 MVPT--SELF--------D------KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1027 ~~~~--~~~~--------~------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
..+. .++. + ...... .......+.+++.+||+.+|++||++.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREE---FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CChhhcccccccccccccccccccccchhhh---cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1000 0000 0 000000 00113468899999999999999999999875
No 321
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-32 Score=310.81 Aligned_cols=270 Identities=24% Similarity=0.343 Sum_probs=197.4
Q ss_pred CCCCCceEecCCcceEEEEEec---CCcEEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--CceE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA---NGEVIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSNL 876 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 876 (1109)
+|++.++||+|+||.||+|... +++.||+|.+.... ......+.+.+|+.++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778889999999999999865 47899999997532 1122345678899999999999999999999988 7889
Q ss_pred EEEEeccCCCHHHHhccCCC--CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC----CCceEEeec
Q 001274 877 LLYEYMENGSLGEQLHGNKQ--TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE----EFQAHVGDF 950 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl~DF 950 (1109)
+||||+++ ++.+++..... ...+++..+..++.||+.|++||| +.+|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 67776643221 124889999999999999999999 789999999999999999 999999999
Q ss_pred cccccccCCCC--CCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCc-----HHHHHHH
Q 001274 951 GLAKLIDLPYS--KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGD-----LVTWVRR 1022 (1109)
Q Consensus 951 G~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~-----~~~~~~~ 1022 (1109)
|+++....... .......++..|+|||++.+. .++.++||||+||++|||++|+.||........ ....+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986643222 122345678899999988764 578999999999999999999999986542210 0001111
Q ss_pred hhhccCCCchh----------hhh----h--cchh-------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1023 SIHEMVPTSEL----------FDK----R--LDLS-------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1023 ~~~~~~~~~~~----------~~~----~--~~~~-------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
........... +.. . .... ..........+.+++.+|+++||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11100000000 000 0 0000 00000223468899999999999999999999875
No 322
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2e-32 Score=305.77 Aligned_cols=264 Identities=27% Similarity=0.339 Sum_probs=200.7
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--CceEEEEE
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSNLLLYE 880 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 880 (1109)
|++.+.||+|+||.||+|+.. +++.||+|++............+.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999876 588999999986543334456788999999999999999999999988 78999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++ +|.+++..... .+++..+..++.||++|++||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~-~l~~~~~~~~~--~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSPEV--KFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9975 89888866532 3899999999999999999999 7799999999999999999999999999998765433
Q ss_pred CCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC----CC-----
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV----PT----- 1030 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~----~~----- 1030 (1109)
........++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ..+........ +.
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL-EKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCCCchhhccccccch
Confidence 222334456788999998765 45789999999999999999999999754321111 11111111000 00
Q ss_pred -------chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1031 -------SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1031 -------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......... .........+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 234 WFENLKPKKPYKRRLRE--FFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhccccccchhHHHH--HhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000000000 0000124568899999999999999999999875
No 323
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.7e-33 Score=303.91 Aligned_cols=250 Identities=24% Similarity=0.292 Sum_probs=202.9
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+|++.+.||+|+||.||+|+++ +++.||+|++...... ....+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999976 6899999999754322 2346789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+++++|.+++.... .+++..+..++.|+++|+.||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQKV---KFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 999999999997653 3889999999999999999999 7799999999999999999999999999988654221
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||...... .............+ ..
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~---~~------ 221 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQETADV---LY------ 221 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhccccc---cC------
Confidence 223456788999999999888999999999999999999999999854321 12222222111100 00
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCH--HHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTM--REVIA 1075 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~--~evl~ 1075 (1109)
.......+.+++.+||+.||.+||++ +|+++
T Consensus 222 ----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 222 ----PATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred ----cccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 11122567899999999999999999 66654
No 324
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.3e-32 Score=304.61 Aligned_cols=259 Identities=20% Similarity=0.244 Sum_probs=186.3
Q ss_pred cCCCCCceEecCCcceEEEEEecC----CcEEEEEEeeccCCCcchh---------HHHHHHHHHhccCCCCceeeEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN----GEVIAVKKIKLRGEGATAD---------NSFLAEISTLGKIRHRNIVKLYGF 868 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~---------~~~~~E~~~l~~l~h~niv~l~~~ 868 (1109)
++|++.++||+|+||+||+|++.+ +..+|+|+........... .....+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 589999999999999999998654 3456666543322211111 112234455667799999999997
Q ss_pred EEeCC----ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 001274 869 CYHQD----SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQ 944 (1109)
Q Consensus 869 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 944 (1109)
+.... ..++++|++. .++.+.+..... .++..+..++.|+++|++||| +.+|+||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIKC---KNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhhcc---CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCc
Confidence 76544 3467888774 466666654332 577888999999999999999 789999999999999999999
Q ss_pred eEEeeccccccccCCCC------CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHH
Q 001274 945 AHVGDFGLAKLIDLPYS------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVT 1018 (1109)
Q Consensus 945 ~kl~DFG~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~ 1018 (1109)
++|+|||+|+....... .......||+.|+|||+..+..++.++||||+||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999986632111 111234699999999999999999999999999999999999999987643332222
Q ss_pred HHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1019 WVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.....+......... . .......+.+++..||+.+|++||+++++++.+
T Consensus 245 ~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAKCDFIKRLHEGKI-----K-----IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhHHHHHHHhhhhhh-----c-----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111111111100000 0 111235688999999999999999999999865
No 325
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.8e-32 Score=302.81 Aligned_cols=250 Identities=24% Similarity=0.279 Sum_probs=197.7
Q ss_pred EecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 810 IGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
||+|+||+||+|... +++.||+|++...... ......+..|++++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999854 6899999998643221 22345677899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcccc
Q 001274 888 GEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAI 967 (1109)
Q Consensus 888 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 967 (1109)
.+++..... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+..... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGR 154 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCccccc
Confidence 999976553 24899999999999999999999 77999999999999999999999999999876542 2223345
Q ss_pred ccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHH
Q 001274 968 AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVE 1047 (1109)
Q Consensus 968 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
.++..|+|||++.+..++.++||||+||++|+|++|+.||...................... ....
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~ 220 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVE--------------YPDK 220 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccccccc--------------CCcc
Confidence 67889999999988889999999999999999999999997644322222221111111100 0111
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHHH
Q 001274 1048 EMTLFLKIALFCSSTSPLNRP-----TMREVIAMMID 1079 (1109)
Q Consensus 1048 ~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~~ 1079 (1109)
....+.+++.+||+.+|++|| ++.+++++-+-
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~ 257 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLF 257 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhh
Confidence 134577999999999999999 77778876544
No 326
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.6e-32 Score=307.96 Aligned_cols=254 Identities=30% Similarity=0.445 Sum_probs=200.3
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
|...+.||+|+||.||+|+.. +++.||+|++...... ......+.+|++++++++|+|++++++++..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667788999999999999864 6889999998644222 23345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
++ |++.+++..... .+++..+..++.+++.|+.||| +.+|+||||+|+||+++.++.++|+|||++.....
T Consensus 107 ~~-g~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 107 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred CC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 97 578777755433 3899999999999999999999 77999999999999999999999999999875431
Q ss_pred CCccccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 962 KSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.....+++.|+|||++. .+.++.++|||||||++|||++|+.||...... ...........+..
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~------- 244 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPTL------- 244 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHhccCCCC-------
Confidence 22346788999999874 456899999999999999999999998753211 11111111111100
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
........+.+++.+||+.+|++||++.+++++.+......
T Consensus 245 -----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 245 -----QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred -----CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 01112245789999999999999999999999887765443
No 327
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.2e-32 Score=303.39 Aligned_cols=250 Identities=24% Similarity=0.386 Sum_probs=200.3
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
.|...+.||+|++|.||+|... +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++...+..++|+||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 3555679999999999999864 68899999886432 23455688999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||.+.......
T Consensus 98 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~- 169 (285)
T cd06648 98 LEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV- 169 (285)
T ss_pred cCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-
Confidence 9999999998762 2889999999999999999999 7899999999999999999999999999887553221
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.......|++.|+|||+..+..++.++||||+||++|||++|+.||.... .............+. ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~----~~~~~~~~~~~~~~~--~~------- 236 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP----PLQAMKRIRDNLPPK--LK------- 236 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC----HHHHHHHHHhcCCCC--Cc-------
Confidence 12233568899999999998889999999999999999999999986422 222222221111100 00
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
........+.+++.+||+.+|++||++.+++++-
T Consensus 237 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 270 (285)
T cd06648 237 --NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHP 270 (285)
T ss_pred --ccccCCHHHHHHHHHHcccChhhCcCHHHHccCc
Confidence 0111224688999999999999999999999764
No 328
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.1e-32 Score=303.92 Aligned_cols=252 Identities=26% Similarity=0.387 Sum_probs=200.6
Q ss_pred CCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC---CCceeeEEEEEEeCCceEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR---HRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 878 (1109)
.|+..+.||+|+||.||+|.+ .+++.||+|.+.... .....+.+.+|++++++++ |||++++++++..+...++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 467788999999999999986 478999999986432 2334567889999998886 99999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+++++|.++++.. .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 81 MEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred EecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 9999999999998653 3899999999999999999999 77999999999999999999999999999987653
Q ss_pred CCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
.. .......|+..|+|||++.++ .++.++|||||||++|+|++|+.||..... ....... ....+ ..
T Consensus 154 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~----~~~~~~~-~~~~~-~~----- 221 (277)
T cd06917 154 NS-SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA----FRAMMLI-PKSKP-PR----- 221 (277)
T ss_pred Cc-cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh----hhhhhcc-ccCCC-CC-----
Confidence 22 223345688999999988754 478999999999999999999999975431 1111110 01100 00
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
+.. ......+.+++.+||+.||++||++.+++++-+.
T Consensus 222 ~~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~ 258 (277)
T cd06917 222 LED-----NGYSKLLREFVAACLDEEPKERLSAEELLKSKWI 258 (277)
T ss_pred CCc-----ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHh
Confidence 000 0123457899999999999999999999987655
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.9e-32 Score=307.08 Aligned_cols=268 Identities=24% Similarity=0.351 Sum_probs=199.8
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|++.+.||+|++|+||+|+++ +++.||+|++..........+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 47888999999999999999875 68999999986544333345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-CCceEEeeccccccccCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE-EFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~~ 959 (1109)
|++ +++.+++..... ..+++..+..++.||+.||+||| +++++||||+|+||+++. ++.+||+|||.+......
T Consensus 82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 588888765433 23678888899999999999999 779999999999999985 567999999999765422
Q ss_pred CCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhh--
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDK-- 1036 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1036 (1109)
........+++.|+|||++.+. .++.++||||+||++|+|+||+.||......+........ .. .+....+..
T Consensus 157 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~ 232 (294)
T PLN00009 157 -VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI-LG--TPNEETWPGVT 232 (294)
T ss_pred -ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hC--CCChhhccccc
Confidence 1222334578899999988764 5789999999999999999999999754322111111110 00 001111000
Q ss_pred ----------hcc-hh-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1037 ----------RLD-LS-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1037 ----------~~~-~~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
... .. ..........+.+++.+|++.+|++||++.+++++-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~ 286 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEY 286 (294)
T ss_pred cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 000 00 0001112345789999999999999999999998743
No 330
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=279.50 Aligned_cols=253 Identities=25% Similarity=0.408 Sum_probs=199.6
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+.+....||.|.-|+||+++.. .|..+|||.+... .+.++.++++..+.++... +.|+||+.+|||..+...++.||
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt-~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT-GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc-CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 3445567999999999999965 5899999999744 3455667788888887666 48999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
.|. ...+.+++.-+.. +++..+-++...++.||.||.+ +++|+|||+||+|||+|+.|.+|++|||.+-++- +
T Consensus 172 lMs-~C~ekLlkrik~p--iPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv--d 244 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGP--IPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV--D 244 (391)
T ss_pred HHH-HHHHHHHHHhcCC--chHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceee--c
Confidence 984 4666676655443 8888888999999999999986 4599999999999999999999999999997665 2
Q ss_pred CCCccccccccceeccccccC---CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT---MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
+...+...|.+.|||||.+.- ..|+.++||||||+.++|+.||+.||.+-..+ .+.+.....+..| ..+..
T Consensus 245 SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td---Fe~ltkvln~ePP---~L~~~ 318 (391)
T KOG0983|consen 245 SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD---FEVLTKVLNEEPP---LLPGH 318 (391)
T ss_pred ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc---HHHHHHHHhcCCC---CCCcc
Confidence 344556678999999998864 35899999999999999999999999864322 2333333332221 11111
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.. -...|.+++..|++.|+.+||...+++++-
T Consensus 319 ~g--------FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 319 MG--------FSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred cC--------cCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 11 123688999999999999999999998764
No 331
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.9e-32 Score=304.24 Aligned_cols=258 Identities=28% Similarity=0.402 Sum_probs=207.1
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
..+.|+..+.||+|+||.||+|.++ +++.||+|++..... ..+.+.+|+++++.++|+|++++++++...+..++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 3456888889999999999999976 688999999974432 456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
+||+++++|.+++..... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 94 ~e~~~~~~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 94 MEYMDGGSLTDIITQNFV--RMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EeccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 999999999999987652 3899999999999999999999 78999999999999999999999999999876542
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.. .......++..|+|||++.+..++.++|||||||++|+|++|+.||...... ...........+. ...
T Consensus 169 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~--~~~--- 238 (286)
T cd06614 169 EK-SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL----RALFLITTKGIPP--LKN--- 238 (286)
T ss_pred ch-hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCCC--Ccc---
Confidence 21 1223345788999999999888999999999999999999999998743211 1111111111110 000
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.......+.+++.+||+.+|.+||++.+++++-+...
T Consensus 239 ------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 239 ------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred ------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 1112245779999999999999999999998765543
No 332
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.7e-32 Score=303.22 Aligned_cols=255 Identities=25% Similarity=0.276 Sum_probs=201.3
Q ss_pred CCCCCceEecCCcceEEEEEe----cCCcEEEEEEeeccCC--CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCce
Q 001274 803 NFSEGAVIGRGACGTVYKATL----ANGEVIAVKKIKLRGE--GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 875 (1109)
+|++.+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+.+|+++++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999986 3689999999874321 122346678899999999 589999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++||||+++++|.+++..... +++..+..++.|+++||.||| +.+++||||+|+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRER---FKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 999999999999999976543 788999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCCCccccccccceeccccccCC--CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 956 IDLPYSKSMSAIAGSYGYIAPEYAYTM--KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
.............++..|+|||++.+. .++.++||||+|+++|+|++|+.||.....................+..
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 232 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP-- 232 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCC--
Confidence 543222223345688999999998753 4678999999999999999999999743333333333333222221111
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMM 1077 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L 1077 (1109)
......+.+++.+||+.+|++|| ++.+++.+-
T Consensus 233 ------------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~ 269 (290)
T cd05613 233 ------------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHP 269 (290)
T ss_pred ------------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCc
Confidence 11223577999999999999997 778887763
No 333
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.6e-32 Score=304.07 Aligned_cols=259 Identities=23% Similarity=0.257 Sum_probs=194.1
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeC--CceEEEE
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQ--DSNLLLY 879 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~ 879 (1109)
|++.++||+|+||.||+|+.. +++.||+|+++...... ......+|+.+++++. |+|++++++++.+. +..++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 567789999999999999865 68999999987543222 2234557888898885 99999999999987 8889999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||++ +++.+++..... .+++..+..++.|++.||+||| +.+++||||+|+||+++. +.+||+|||.++.....
T Consensus 80 e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 80 ELMD-MNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred ecCC-ccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 9997 588888875433 3899999999999999999999 779999999999999999 99999999999866422
Q ss_pred CCCCccccccccceecccccc-CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.......++..|+|||++. ++.++.++||||+||++|||++|+.||.+.... +........... ..+.+.+..
T Consensus 153 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~ 226 (282)
T cd07831 153 --PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-DQIAKIHDVLGT---PDAEVLKKF 226 (282)
T ss_pred --CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-HHHHHHHHHcCC---CCHHHHHhh
Confidence 2223346788999999765 455789999999999999999999999754321 111111111110 000000000
Q ss_pred chh---------------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1039 DLS---------------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1039 ~~~---------------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
... ..........+.+++.+||+.+|++||++.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000 00011234678899999999999999999999876
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.4e-32 Score=312.27 Aligned_cols=268 Identities=27% Similarity=0.343 Sum_probs=200.7
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCC--ce
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQD--SN 875 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--~~ 875 (1109)
..++|++.+.||+|+||.||+|.+. +++.||+|++............+.+|+.+++++ +|+||+++++++...+ ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888999999999999999875 688999999864433334455677899999999 9999999999986543 57
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++||||++ ++|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||.++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 5999988764 3789999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCC----CCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCC
Q 001274 956 IDLPYS----KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 956 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1109)
...... .......++..|+|||++.+ ..++.++||||||+++|+|++|+.||.+............. . + .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~-~-~-~~~ 233 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEV-I-G-PPS 233 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-h-C-CCC
Confidence 542221 12234568899999998765 45789999999999999999999999754321111111110 0 0 000
Q ss_pred ch------------hhhhhc----chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1031 SE------------LFDKRL----DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1031 ~~------------~~~~~~----~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.+ .++... .............+.+++.+||+.+|++|||+.+++++-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~ 297 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPY 297 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChh
Confidence 00 000000 0000001112356789999999999999999999998843
No 335
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-33 Score=297.44 Aligned_cols=257 Identities=25% Similarity=0.279 Sum_probs=205.5
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
.+.|+.-++||+|+||.||-++.. +|+.||.|++..+.. ....+...+.|-.++.++..+.||.+--+|...+..|+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 357888899999999999999854 699999998853321 122345577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
+..|.||+|.-++...+. ..+++..++..+.+|+-||++|| +.+||+||+||+|||+|+.|+++|+|.|+|..+.
T Consensus 264 LtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~- 338 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP- 338 (591)
T ss_pred EEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecC-
Confidence 999999999999987764 34999999999999999999999 7799999999999999999999999999999775
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
........+||.+|||||++....|+...|.||+||++|||+.|+.||........-.+.-+....+..
T Consensus 339 -~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~---------- 407 (591)
T KOG0986|consen 339 -EGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPE---------- 407 (591)
T ss_pred -CCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchh----------
Confidence 344556669999999999999999999999999999999999999999864422221122222111111
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMM 1077 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L 1077 (1109)
+++..-.++...+....++.||++|. .+++|.+|-
T Consensus 408 ----ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hp 447 (591)
T KOG0986|consen 408 ----EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHP 447 (591)
T ss_pred ----hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCc
Confidence 11111223455777888899999985 466777663
No 336
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.5e-32 Score=309.59 Aligned_cols=267 Identities=22% Similarity=0.281 Sum_probs=198.2
Q ss_pred eEecC--CcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 809 VIGRG--ACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 809 ~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
.||+| +||+||+|++. +++.||+|++..........+.+.+|+.+++.++||||+++++++..++..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 45666 99999999874 7999999998765444445578889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC--
Q 001274 886 SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS-- 963 (1109)
Q Consensus 886 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-- 963 (1109)
++.+++...... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||+.+..........
T Consensus 85 ~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYFPE-GMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 999998765432 3889999999999999999999 7799999999999999999999999998654332111110
Q ss_pred ----ccccccccceeccccccCC--CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCc------
Q 001274 964 ----MSAIAGSYGYIAPEYAYTM--KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTS------ 1031 (1109)
Q Consensus 964 ----~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~------ 1031 (1109)
.....++..|+|||++.+. .++.++||||+||++|||++|+.||................ ...+..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 238 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGP--PYSPLDITTFPC 238 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCC--CCCCccccccch
Confidence 0112345679999998764 47899999999999999999999997543221111111100 000000
Q ss_pred ---------------------------hhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1032 ---------------------------ELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1032 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
....... ...........+.+++.+||+.||++|||+.|++++-+.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERL--RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccc--cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 0000000 0111223456789999999999999999999999886654433
No 337
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.3e-32 Score=304.13 Aligned_cols=258 Identities=24% Similarity=0.241 Sum_probs=201.5
Q ss_pred CCCCCceEecCCcceEEEEEe----cCCcEEEEEEeeccCC--CcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCce
Q 001274 803 NFSEGAVIGRGACGTVYKATL----ANGEVIAVKKIKLRGE--GATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 875 (1109)
+|++.+.||+|+||.||+|+. .+++.||||+++.... .....+.+.+|+++++++ +|++|+++++++..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999974 2578899999874321 122345688999999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++||||+++|+|.+++.... .+++..+..++.|+++||.||| ..+++||||+|+||+++.++.++++|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999987643 2889999999999999999999 78999999999999999999999999999886
Q ss_pred ccCCCCCCccccccccceeccccccCCC--CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 956 IDLPYSKSMSAIAGSYGYIAPEYAYTMK--VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
.............++..|+|||++.+.. .+.++||||+|+++|||++|..||..........+..+.......+...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPK- 233 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCc-
Confidence 5433222223456889999999987765 7889999999999999999999996432222223333322222211111
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.....+.+++.+||+.+|++|||+.++.+.+...
T Consensus 234 -------------~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 234 -------------TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred -------------ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1123467899999999999999988777665443
No 338
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=7.3e-32 Score=294.73 Aligned_cols=250 Identities=30% Similarity=0.433 Sum_probs=203.2
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|++++++++++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 4777889999999999999975 688999999974432 3557889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++..... .+++..+..++.|++.|+.||| ..+++||||+|+||+++.++.++|+|||.+........
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 79 CSGGSLKDLLKSTNQ--TLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred CCCCcHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 999999999877542 3899999999999999999999 78999999999999999999999999999987653221
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
.....++..|+|||++.+..++.++||||+|+++|+|++|+.||..... ............ .....
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~--~~~~~------ 219 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP----MKALFKIATNGP--PGLRN------ 219 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch----HHHHHHHHhcCC--CCcCc------
Confidence 3345688899999999988899999999999999999999999875321 111111111110 00000
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||+.||++|||+.|++++
T Consensus 220 ---~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 220 ---PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ---ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11113457899999999999999999999875
No 339
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6e-32 Score=301.87 Aligned_cols=266 Identities=25% Similarity=0.318 Sum_probs=199.2
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC---CCCceeeEEEEEEeCCc-----
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI---RHRNIVKLYGFCYHQDS----- 874 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 874 (1109)
|++.+.||+|+||.||+|+++ +++.||+|+++...........+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999976 489999999975544333345566788776655 69999999999988776
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.+++|||+. ++|.+++...... .+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.+||+|||.+.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKP-GLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence 899999997 4898888764432 4899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc---cCCCc
Q 001274 955 LIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE---MVPTS 1031 (1109)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~ 1031 (1109)
..... .......++..|+|||++.+..++.++|||||||++|||++|+.||......+....+....... ..+..
T Consensus 156 ~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 156 IYSFE--MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eccCC--cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 76422 12233457889999999999999999999999999999999999987543222222222111000 00000
Q ss_pred h-----hhhhhcchh-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1032 E-----LFDKRLDLS-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1032 ~-----~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
. .+....... .....+....+.+++.+||+.||++||++.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 000000000 01112234567899999999999999999999865
No 340
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.7e-32 Score=307.29 Aligned_cols=267 Identities=22% Similarity=0.340 Sum_probs=197.6
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc-----
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS----- 874 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 874 (1109)
.++|++.++||+|+||.||+|+.. +++.||||++............+.+|++++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 467999999999999999999865 68999999987544333334556789999999999999999999876543
Q ss_pred ---eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 875 ---NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 875 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
.++||||+. +++.+++..... .+++.++..++.||+.|++||| +.+++|+||||+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCC
Confidence 489999996 588888865432 3899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCC---CccccccccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhcc
Q 001274 952 LAKLIDLPYSK---SMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEM 1027 (1109)
Q Consensus 952 ~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 1027 (1109)
.+......... ......++..|+|||++.+.. ++.++||||+|+++|||++|+.||...... .....+.... +.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-~~~~~~~~~~-~~ 242 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-HQLTLISQLC-GS 242 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh-CC
Confidence 99866432211 123345788999999887654 788999999999999999999998754321 1111111111 11
Q ss_pred CCCchhhhhh--------cchhhc---------ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1028 VPTSELFDKR--------LDLSAK---------RTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1028 ~~~~~~~~~~--------~~~~~~---------~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.+. +.+... ...... ........+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 243 ITP-EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CCh-hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 000000 000000 000012346789999999999999999999876
No 341
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2e-32 Score=305.90 Aligned_cols=259 Identities=25% Similarity=0.376 Sum_probs=196.6
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+|...++||+|+||.||++++. +++.||+|++...... .....+.+|+.++.++. |+||+++++++..++..+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 4556678999999999999865 6899999998744322 34567889999999996 9999999999999999999999
Q ss_pred eccCCCHHHHh---ccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 881 YMENGSLGEQL---HGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 881 ~~~~gsL~~~l---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
|+.. ++.++. .... ...+++..+..++.+++.|++|||+ ..+++||||||+||+++.++.++|+|||+++...
T Consensus 84 ~~~~-~l~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVL-KSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred cccC-CHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9864 555433 2221 1248999999999999999999993 2489999999999999999999999999997654
Q ss_pred CCCCCCccccccccceeccccccCC---CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTM---KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
.. .......++..|+|||++.+. .++.++||||+||++|||++|+.||.... ...+.+........+. .
T Consensus 160 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~~~~~~~~~~~~---~ 231 (288)
T cd06616 160 DS--IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN---SVFDQLTQVVKGDPPI---L 231 (288)
T ss_pred cC--CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc---hHHHHHhhhcCCCCCc---C
Confidence 22 122334678899999998876 68999999999999999999999997532 1222222222211110 0
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
. ..........+.+++.+||+.+|++|||+.+|+++-+..
T Consensus 232 ~------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 271 (288)
T cd06616 232 S------NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271 (288)
T ss_pred C------CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence 0 000112234678999999999999999999999885543
No 342
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.9e-32 Score=313.00 Aligned_cols=268 Identities=23% Similarity=0.310 Sum_probs=201.1
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----c
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-----S 874 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 874 (1109)
.++|.+.+.||+|+||+||+|+.. +++.||||++............+.+|+.+++.++|+||+++++++.... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 357899999999999999999864 6899999998754333344566788999999999999999999886543 4
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++||||+. ++|.+++..... +++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||+++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQT---LSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999995 689888876543 899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 955 LIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
...... .......++..|+|||++.. ..++.++|||||||++|+|++|+.||.+...... ...+....... ..+.
T Consensus 157 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~--~~~~ 232 (337)
T cd07858 157 TTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ-LKLITELLGSP--SEED 232 (337)
T ss_pred ccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH-HHHHHHHhCCC--ChHH
Confidence 664221 22234567889999998765 4689999999999999999999999975421111 11111100000 0000
Q ss_pred hh-----------hhcchh-----hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1034 FD-----------KRLDLS-----AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1034 ~~-----------~~~~~~-----~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.. +..... ..........+.+++.+||+.+|++|||+++++++-+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~ 294 (337)
T cd07858 233 LGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294 (337)
T ss_pred hhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcch
Confidence 00 000000 00011233557899999999999999999999999443
No 343
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.7e-33 Score=329.97 Aligned_cols=253 Identities=28% Similarity=0.448 Sum_probs=192.5
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe---------
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH--------- 871 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 871 (1109)
.+|++.+.||+||||.||+++.+ ||+.||||++.... .......+.+|+..+.+++|||||+++..+.+
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 46777889999999999999976 89999999998776 45566778899999999999999999631100
Q ss_pred ---------------------------------------------------------------------C----------
Q 001274 872 ---------------------------------------------------------------------Q---------- 872 (1109)
Q Consensus 872 ---------------------------------------------------------------------~---------- 872 (1109)
+
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0
Q ss_pred -------------------------------CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhh
Q 001274 873 -------------------------------DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHY 921 (1109)
Q Consensus 873 -------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~ 921 (1109)
...||-||||+..++.++++.+... -.....++++.+|++|+.|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYIH- 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYIH- 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHHH-
Confidence 0137889999998888888776532 146788999999999999999
Q ss_pred cCCCCeEecCCCCCceeeCCCCceEEeecccccccc-----------------CCCCCCccccccccceeccccccCCC-
Q 001274 922 DCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID-----------------LPYSKSMSAIAGSYGYIAPEYAYTMK- 983 (1109)
Q Consensus 922 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~- 983 (1109)
+.|||||||||.||+++++..|||+|||+|.... .......+..+||.-|+|||++.+..
T Consensus 715 --~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 715 --DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred --hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 8899999999999999999999999999998721 01112335678999999999987654
Q ss_pred --CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccC
Q 001274 984 --VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSS 1061 (1109)
Q Consensus 984 --~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 1061 (1109)
|+.|+||||+|||++||+. ||....+......-++ .+..|.+. ....+....=.++|+++++
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR---~g~iP~~~----------~f~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR---KGSIPEPA----------DFFDPEHPEEASLIRWLLS 856 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc---cCCCCCCc----------ccccccchHHHHHHHHHhc
Confidence 9999999999999999974 5664322222222122 22222221 1122223334589999999
Q ss_pred CCCCCCCCHHHHHHH
Q 001274 1062 TSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1062 ~dP~~RPt~~evl~~ 1076 (1109)
.||.+||||.|++..
T Consensus 857 hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 857 HDPSKRPTATELLNS 871 (1351)
T ss_pred CCCccCCCHHHHhhc
Confidence 999999999999853
No 344
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.3e-32 Score=303.36 Aligned_cols=263 Identities=27% Similarity=0.368 Sum_probs=202.2
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
|++.+.||+|++|.||+|... +++.+|+|++............+.+|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999865 6899999998755444344567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
++ ++.+++..... .+++..+..++.|+++|+.||| +.+|+|+||||+||+++.++.++|+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQR--GLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-R 153 (283)
T ss_pred CC-CHHHHHHhhcc--cCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-c
Confidence 75 88888876432 3899999999999999999999 7799999999999999999999999999998765332 1
Q ss_pred CccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc--
Q 001274 963 SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD-- 1039 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1039 (1109)
......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+.... +....... ....+.....
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~ 230 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK-IFRTLGTP--DPEVWPKFTSLA 230 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHcCCC--chHhcccchhhh
Confidence 22334678889999998876 789999999999999999999999975432111111 11111100 0000000000
Q ss_pred -------------hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1040 -------------LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1040 -------------~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
............+.+++.+||+.||.+||++.+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000112234568899999999999999999999875
No 345
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.3e-31 Score=293.32 Aligned_cols=250 Identities=30% Similarity=0.453 Sum_probs=204.1
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.+.||+|++|.||+|+.. +++.||+|.+..........+.+.+|++++++++|+|++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 678999999986654434567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+++++|.+++.... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 99999999997653 3899999999999999999999 78999999999999999999999999999987653222
Q ss_pred CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchh
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLS 1041 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1109)
......++..|+|||+..+..++.++||||+|+++|+|++|+.||.... ..............+.
T Consensus 155 -~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~----------- 219 (254)
T cd06627 155 -DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN---PMAALFRIVQDDHPPL----------- 219 (254)
T ss_pred -cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHhccCCCCC-----------
Confidence 1234567889999999988889999999999999999999999987543 1111111111111111
Q ss_pred hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1042 AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1042 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+|++.+|++||++.+++.+
T Consensus 220 ---~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 220 ---PEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred ---CCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 01112457799999999999999999999854
No 346
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.4e-31 Score=295.19 Aligned_cols=247 Identities=26% Similarity=0.304 Sum_probs=191.9
Q ss_pred HHHHhcCCCCCceE--ecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC
Q 001274 797 LLEATGNFSEGAVI--GRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ 872 (1109)
Q Consensus 797 ~~~~~~~~~~~~~l--G~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 872 (1109)
.....++|.+.+.+ |+|+||.||+++.+ +++.+|+|.+....... .|+.....+ +|+||+++++++...
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecC
Confidence 33445677777776 99999999999864 68889999986432111 122222222 799999999999999
Q ss_pred CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeecc
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-QAHVGDFG 951 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG 951 (1109)
+..++||||+++++|.+++.... .+++..+..++.|+++|+.||| +.+++||||||+||+++.++ .++|+|||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 99999999999999999997654 3899999999999999999999 78999999999999999998 99999999
Q ss_pred ccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC-cHHHHHHHhhhccCCC
Q 001274 952 LAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGG-DLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 952 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 1030 (1109)
.++..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||....... ....+.... ....+.
T Consensus 156 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 229 (267)
T PHA03390 156 LCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPF 229 (267)
T ss_pred cceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCc
Confidence 98765421 23467889999999999999999999999999999999999998543222 112222221 111110
Q ss_pred chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 001274 1031 SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPT-MREVIAM 1076 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt-~~evl~~ 1076 (1109)
.......+.+++.+|++.+|++||+ +++++++
T Consensus 230 --------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 230 --------------IKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred --------------ccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 1122345789999999999999996 6998865
No 347
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7.5e-32 Score=299.36 Aligned_cols=248 Identities=24% Similarity=0.250 Sum_probs=190.3
Q ss_pred eEecCCcceEEEEEec-CCcEEEEEEeeccCCCcc-hhHHHHHHHHHh---ccCCCCceeeEEEEEEeCCceEEEEEecc
Q 001274 809 VIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGAT-ADNSFLAEISTL---GKIRHRNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
.||+|+||.||+|+.. +++.||+|.+........ ....+.+|..++ ...+|++|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 3899999999999865 689999999865432212 223344554433 34479999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC
Q 001274 884 NGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS 963 (1109)
Q Consensus 884 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 963 (1109)
+|+|.+++...+. +++..+..++.|++.|++||| +.+|+||||||+||+++.++.++++|||++...... .
T Consensus 81 ~~~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---~ 151 (279)
T cd05633 81 GGDLHYHLSQHGV---FSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---K 151 (279)
T ss_pred CCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc---C
Confidence 9999999876543 899999999999999999999 779999999999999999999999999999755321 1
Q ss_pred ccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhh
Q 001274 964 MSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSA 1042 (1109)
Q Consensus 964 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1109)
.....|+..|+|||++.+ ..++.++||||+||++|||++|..||...... ...............
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~------------- 217 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-DKHEIDRMTLTVNVE------------- 217 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc-CHHHHHHHhhcCCcC-------------
Confidence 223468999999998864 56899999999999999999999999754321 111111111110000
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHHHh
Q 001274 1043 KRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMIDA 1080 (1109)
Q Consensus 1043 ~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~~~ 1080 (1109)
........+.+++.+|++.||++|| ++++++++.+..
T Consensus 218 -~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~ 259 (279)
T cd05633 218 -LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFK 259 (279)
T ss_pred -CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcccc
Confidence 0111224577899999999999999 699999986544
No 348
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.3e-32 Score=311.95 Aligned_cols=273 Identities=22% Similarity=0.326 Sum_probs=205.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe----CCceE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH----QDSNL 876 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 876 (1109)
++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 68899999999999999999865 69999999997554333445677889999999999999999998764 34578
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+||||+. ++|.+++..... +++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 85 lv~e~~~-~~l~~~~~~~~~---~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQP---LTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEehhh-hhHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 9999995 689998876543 899999999999999999999 779999999999999999999999999999765
Q ss_pred cCCCCCC---ccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCch
Q 001274 957 DLPYSKS---MSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSE 1032 (1109)
Q Consensus 957 ~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1109)
....... .....++..|+|||++.+ ..++.++||||+||++|||++|+.||.+....... ..+..... .+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~-~~~~~~~g--~~~~~ 234 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQL-KLILSVLG--SPSEE 234 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHH-HHHHHHhC--CChhH
Confidence 4322111 134578889999998765 45899999999999999999999999754321111 11111000 00111
Q ss_pred hhhh-----------hcchhhc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1033 LFDK-----------RLDLSAK-----RTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1033 ~~~~-----------~~~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
.++. ....... ........+.+++.+||+.+|++||++++++.+-+......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 1000 0000000 01122456889999999999999999999999877664433
No 349
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.2e-32 Score=308.67 Aligned_cols=268 Identities=24% Similarity=0.316 Sum_probs=198.5
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----c
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-----S 874 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 874 (1109)
.++|++.++||+|+||.||+|++. +++.||+|++.... .......+.+|+.++++++|+||+++++++.... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 468999999999999999999864 68999999986332 2234456888999999999999999999876543 4
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++|+||++ +++.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 83 VYIVQELME-TDLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEEehhcc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECccccee
Confidence 689999996 4888877543 2899999999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCCC--CccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCc
Q 001274 955 LIDLPYSK--SMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTS 1031 (1109)
Q Consensus 955 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1109)
........ ......++..|+|||++.+ ..++.++||||+||++|+|++|+.||.+...... ...+...... +..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~-~~~~~~~~~~--~~~ 231 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ-LNLILGVLGT--PSQ 231 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCC--CCH
Confidence 65422111 1234568899999998754 5689999999999999999999999975321111 1111110100 000
Q ss_pred hhhhhh-----------cchhhc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1032 ELFDKR-----------LDLSAK-----RTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1032 ~~~~~~-----------~~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
+.+... ...... ........+.+++.+||+.+|++|||+.|++++-+-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~ 296 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLE 296 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence 100000 000000 0011234588999999999999999999999984433
No 350
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-34 Score=332.42 Aligned_cols=269 Identities=22% Similarity=0.202 Sum_probs=212.7
Q ss_pred HHHHHHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeC
Q 001274 795 HNLLEATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ 872 (1109)
Q Consensus 795 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 872 (1109)
.++....++|.+.++||+|+||.|..++++ +++.||+|++..-.-- .....-|..|-.+|..-+.+.|+.+.-.|++.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 344455678999999999999999999976 6889999998642111 12345688899999999999999999999999
Q ss_pred CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
.+.|+|||||+||+|..++.+... ++++.++.++..|+.||+.+| +.|+|||||||+|||+|..|++|++|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~~---~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFDR---LPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcCC---ChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchh
Confidence 999999999999999999988773 999999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceecccccc----C-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhcc
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAY----T-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEM 1027 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 1027 (1109)
+..++.+........+|||.|.+||++. + +.|+..+|.||+||++|||+.|..||......+.+-..+...-.-.
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~ 301 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS 301 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC
Confidence 9888766566667789999999999986 3 5699999999999999999999999985432222222111110111
Q ss_pred CCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHHHHHhhhcc
Q 001274 1028 VPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPT---MREVIAMMIDARQSV 1084 (1109)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt---~~evl~~L~~~~~~~ 1084 (1109)
+| + ..+..+...++|.+.+. +|+.|.. +.++..|.+..-...
T Consensus 302 FP--~------------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 302 FP--D------------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred CC--c------------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence 11 0 11223445567766544 6888888 999998876554333
No 351
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.8e-32 Score=297.46 Aligned_cols=252 Identities=27% Similarity=0.389 Sum_probs=197.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccC---CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--Cce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRG---EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 875 (1109)
.+|++.+.||+|+||.||+|++. +++.||+|++.... ........+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999864 68999999885432 1223446788999999999999999999998764 357
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++|+||+++++|.+++..... +++..+.+++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||.++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGA---LTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 899999999999999876543 788999999999999999999 77999999999999999999999999999986
Q ss_pred ccCCC--CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh
Q 001274 956 IDLPY--SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 956 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
..... ........++..|+|||++.+..++.++|||||||++|||++|+.||...... ..+....... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~--~~~~ 229 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AAIFKIATQP--TKPM 229 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HHHHHHHcCC--CCCC
Confidence 53211 11123456889999999999888999999999999999999999999753211 1111111111 1111
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
+ .......+.+++.+||+ +|.+||++.+++.+
T Consensus 230 ~----------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 230 L----------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred C----------CcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 1 11222457899999999 47999999998865
No 352
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.98 E-value=6.6e-32 Score=296.23 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=206.9
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.+.||.|+||.||+|.+. +++.||+|++..........+.+.+|+++++.++|+|++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999965 689999999986655445667889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 882 MENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
+++++|.+++.... ....+++..+..++.+++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 1234899999999999999999999 7799999999999999999999999999998665322
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......+++.|+|||...+..++.++||||+|+++|+|++|+.||.... ..+..........+. .
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~--~------- 223 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN----LLELALKILKGQYPP--I------- 223 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc----HHHHHHHHhcCCCCC--C-------
Confidence 12234568889999999998899999999999999999999999987533 222222222211110 0
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.......+.+++.+||..+|++||++.+++++
T Consensus 224 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 224 ----PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ----CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00112457799999999999999999999875
No 353
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=1.3e-31 Score=294.96 Aligned_cols=248 Identities=23% Similarity=0.254 Sum_probs=200.3
Q ss_pred EecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 810 IGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
||.|+||.||+|+.. +++.||+|++..... .....+.+.+|+++++.++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999975 589999999975432 223456799999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcccc
Q 001274 888 GEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAI 967 (1109)
Q Consensus 888 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 967 (1109)
.+++.+... +++..+..++.|++.|++|+| +.+++|+||+|+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~ 152 (262)
T cd05572 81 WTILRDRGL---FDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTF 152 (262)
T ss_pred HHHHhhcCC---CCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccc
Confidence 999976543 889999999999999999999 7899999999999999999999999999998664221 22334
Q ss_pred ccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHH
Q 001274 968 AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVE 1047 (1109)
Q Consensus 968 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
.++..|+|||++.+..++.++|+||+|+++|+|++|+.||..... +..+............ .....
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~------------~~~~~ 218 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE--DPMEIYNDILKGNGKL------------EFPNY 218 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC--CHHHHHHHHhccCCCC------------CCCcc
Confidence 678899999999888899999999999999999999999975432 2233333322111000 00111
Q ss_pred HHHHHHHHHHhccCCCCCCCCC-----HHHHHHHHHH
Q 001274 1048 EMTLFLKIALFCSSTSPLNRPT-----MREVIAMMID 1079 (1109)
Q Consensus 1048 ~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~~ 1079 (1109)
....+.+++.+||+.+|++||+ ++|++++-+.
T Consensus 219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~ 255 (262)
T cd05572 219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWF 255 (262)
T ss_pred cCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhh
Confidence 1346789999999999999999 8888886654
No 354
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.98 E-value=6e-32 Score=306.10 Aligned_cols=269 Identities=21% Similarity=0.216 Sum_probs=196.0
Q ss_pred CceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCC
Q 001274 807 GAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGS 886 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 886 (1109)
++.+|.|+++.||++.. +++.||||++..........+.+.+|++++++++|+||+++++++...+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33444444544444444 68999999997654444556789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC-----
Q 001274 887 LGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS----- 961 (1109)
Q Consensus 887 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----- 961 (1109)
+.+++...... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||.+........
T Consensus 86 l~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 86 CEDLLKTHFPE-GLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 99999764322 3788999999999999999999 77999999999999999999999999998875532111
Q ss_pred -CCccccccccceeccccccCC--CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-----C----
Q 001274 962 -KSMSAIAGSYGYIAPEYAYTM--KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-----P---- 1029 (1109)
Q Consensus 962 -~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-----~---- 1029 (1109)
.......++..|+|||++.+. .++.++||||+||++|||++|+.||..........+.......... +
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 111334577889999998763 5889999999999999999999999864322222221111100000 0
Q ss_pred -Cch----hhhh--hcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1030 -TSE----LFDK--RLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1030 -~~~----~~~~--~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
... ..+. ...............+.+++.+||+.+|++|||+.+++++-+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~ 299 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK 299 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence 000 0000 00000111222234678999999999999999999999987654
No 355
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.98 E-value=8.2e-32 Score=295.30 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=204.7
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|++.++||+|+||.||+++.. +++.+|+|++............+.+|++++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999855 688999999976544444566788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 882 MENGSLGEQLHGNKQ-TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
+++++|.+++..... ...+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999866321 234889999999999999999999 789999999999999999999999999999876532
Q ss_pred CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 961 SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
......++..|+|||.+.+..++.++|+||+|+++|||++|+.||.... ..+..........+.
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~---------- 220 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS----MQDLRYKVQRGKYPP---------- 220 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCCCC----------
Confidence 2223457889999999999999999999999999999999999997543 122222111111110
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
........+.+++.+|++.+|++||++.+++++
T Consensus 221 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 221 ---IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ---CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 011233457899999999999999999999875
No 356
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.98 E-value=1.8e-31 Score=292.93 Aligned_cols=253 Identities=29% Similarity=0.425 Sum_probs=206.4
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--CceEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ--DSNLLLY 879 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 879 (1109)
+|+..+.||+|++|.||+|... +++.|++|++..........+.+.+|++++++++|+||+++++.+... +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999976 689999999975544345567899999999999999999999999988 8899999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||+++++|.+++.... .+++..+..++.|+++|++||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999998765 3899999999999999999999 789999999999999999999999999999876533
Q ss_pred CCC-CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 960 YSK-SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 960 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
... ......++..|+|||...+..++.++||||+|+++|+|++|+.||.... .............. ...
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~-~~~------ 224 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG---NPMAALYKIGSSGE-PPE------ 224 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---chHHHHHhccccCC-CcC------
Confidence 221 1234568889999999998889999999999999999999999997543 11121111111000 000
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
........+.+++.+|++.+|++||++.|++.+
T Consensus 225 -----~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 225 -----IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred -----CCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 011113568899999999999999999999875
No 357
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.98 E-value=1.7e-31 Score=305.62 Aligned_cols=264 Identities=23% Similarity=0.322 Sum_probs=196.8
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC------
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD------ 873 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 873 (1109)
.++|...+.||+|+||.||+|++. +++.||||+++...........+.+|++++++++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368989999999999999999864 6899999998754333333456889999999999999999999987543
Q ss_pred ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLA 953 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 953 (1109)
..++|+||+.. ++..+... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMGH-----PLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 35899999964 77766521 2889999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhcc-CCCc
Q 001274 954 KLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEM-VPTS 1031 (1109)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 1031 (1109)
+.... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.+... ...+....... .+..
T Consensus 165 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 165 RHADA----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY----LDQLTQILKVTGVPGP 236 (342)
T ss_pred cCCCC----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcCCCCH
Confidence 75431 2234567889999999876 4688999999999999999999999985321 11111111111 0000
Q ss_pred hhhhhhc-----------chhhc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--HHHhh
Q 001274 1032 ELFDKRL-----------DLSAK-----RTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM--MIDAR 1081 (1109)
Q Consensus 1032 ~~~~~~~-----------~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~--L~~~~ 1081 (1109)
...+... ..... ........+.+++.+||+.||++||++++++.+ ++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000000 00000 001122457799999999999999999999977 54443
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.98 E-value=1.1e-31 Score=306.30 Aligned_cols=268 Identities=26% Similarity=0.308 Sum_probs=206.0
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----ceE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-----SNL 876 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 876 (1109)
+|++.+.||+|+||.||+|+.. +++.||||++..........+.+.+|+.+++.++|+||+++++++...+ ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999975 5899999999755433445678999999999999999999999988775 789
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+||||++ ++|.+++.... .+++..+..++.+++.||+||| +.+|+||||||+||+++.++.++|+|||.+...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 58988887654 3899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCC--CCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CCch
Q 001274 957 DLPYS--KSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PTSE 1032 (1109)
Q Consensus 957 ~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~ 1032 (1109)
..... .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||...... +.......... +..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~ 229 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI----DQLNLIVEVLGTPSEE 229 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH----HHHHHHHHhcCCCChh
Confidence 53321 123445678899999999888 7899999999999999999999999754321 11111111110 0000
Q ss_pred hhh-----------hhcchhh-----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1033 LFD-----------KRLDLSA-----KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1033 ~~~-----------~~~~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
... ....... .........+.+++.+||+.+|++||++.+++++-+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 000 0000000 001112356789999999999999999999999855443
No 359
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-32 Score=256.35 Aligned_cols=264 Identities=23% Similarity=0.351 Sum_probs=204.8
Q ss_pred CCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 803 NFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+|...++||+|.||+||+|+ +++++.||+|.+..............+|+-+++.++|+|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45667789999999999998 45689999999988777666677889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
|. .+|..|.....+. ++.+.++.++.|+++|+.++| ++++.|||+||.|.+++.+|.+|++|||+++.++.+.
T Consensus 83 cd-qdlkkyfdslng~--~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipv- 155 (292)
T KOG0662|consen 83 CD-QDLKKYFDSLNGD--LDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV- 155 (292)
T ss_pred hh-HHHHHHHHhcCCc--CCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCce-
Confidence 95 5898888765554 899999999999999999999 7899999999999999999999999999999877443
Q ss_pred CCccccccccceeccccccCCC-CCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 962 KSMSAIAGSYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
......+.|..|++|+++.+.+ |+...|+||.||++.|+.. |++.|.+. +..+.+++.+.-.....+--.+.+.
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~----dvddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC----cHHHHHHHHHHHhCCCccccCCccc
Confidence 2345567799999999999876 7899999999999999998 55556643 3333444333322211111111110
Q ss_pred h----------hh-----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1040 L----------SA-----KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1040 ~----------~~-----~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
. .. ...+.-...-.+++++.+.-+|.+|.++++.+++-
T Consensus 232 ~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp 284 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP 284 (292)
T ss_pred cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence 0 00 00111112345677777888999999999988764
No 360
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.98 E-value=1.1e-31 Score=300.06 Aligned_cols=250 Identities=24% Similarity=0.397 Sum_probs=198.2
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGS 886 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 886 (1109)
.+||+|+||.||+|..+ +++.||||++.... ......+.+|+.+++.++|+|++++++++...+..++||||+++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 57999999999999864 78999999885432 2345678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCccc
Q 001274 887 LGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSA 966 (1109)
Q Consensus 887 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 966 (1109)
|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++....... .....
T Consensus 104 L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~ 175 (292)
T cd06657 104 LTDIVTHT----RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKS 175 (292)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccc
Confidence 99987543 2789999999999999999999 7799999999999999999999999999987654221 22234
Q ss_pred cccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccH
Q 001274 967 IAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTV 1046 (1109)
Q Consensus 967 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
..++..|+|||++.+..++.++||||+|+++|||++|+.||..... .+..... ....+.. .. ...
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~----~~~~~~~-~~~~~~~------~~----~~~ 240 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP----LKAMKMI-RDNLPPK------LK----NLH 240 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHH-HhhCCcc------cC----Ccc
Confidence 5688999999999888899999999999999999999999874321 1111111 1111100 00 011
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1047 EEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1047 ~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
.....+.+++.+||+.+|.+||++.+++++=+....
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~ 276 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 276 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhcc
Confidence 112346789999999999999999999987554443
No 361
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=9e-32 Score=308.11 Aligned_cols=271 Identities=25% Similarity=0.327 Sum_probs=202.9
Q ss_pred HHHHHHhcCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC-
Q 001274 795 HNLLEATGNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ- 872 (1109)
Q Consensus 795 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~- 872 (1109)
.++...+++|.+.+.||+|+||.||+|.. .+++.||+|+++.........+.+.+|++++++++|+||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 34556778999999999999999999985 4789999999874433333456788999999999999999999988643
Q ss_pred -----CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 001274 873 -----DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHV 947 (1109)
Q Consensus 873 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 947 (1109)
...+++++++ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEE
Confidence 2357788877 78998887643 2899999999999999999999 789999999999999999999999
Q ss_pred eeccccccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 948 GDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 948 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
+|||+++... .......++..|+|||++.+ ..++.++||||+||++|||++|+.||.............+..
T Consensus 162 ~dfg~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--- 234 (345)
T cd07877 162 LDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--- 234 (345)
T ss_pred eccccccccc----ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh---
Confidence 9999998643 22234567889999998866 568899999999999999999999997533211111111110
Q ss_pred cCCCchhhhhh-----------cchhhc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1027 MVPTSELFDKR-----------LDLSAK-----RTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1027 ~~~~~~~~~~~-----------~~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..+........ +..... ........+.+++.+|++.||++||++.+++++-+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~ 304 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 304 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence 00011111000 000000 0001234577999999999999999999999987644
No 362
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.3e-33 Score=284.05 Aligned_cols=253 Identities=24% Similarity=0.286 Sum_probs=204.1
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
.++|...++||+|.||+|-+++-+ .++.||+|+++....- .++...-..|-++++..+||.+..+--.|+..+..|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 467888899999999999999855 7999999999755322 23344566889999999999999998889999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+.||.|.-++.+.+ .+++...+.....|+.||.||| +.+||+||+|.+|.|+|.||++||+|||+++.--
T Consensus 247 MeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I- 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI- 319 (516)
T ss_pred EEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc-
Confidence 99999999998887654 3899999999999999999999 7799999999999999999999999999998543
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
.+......++||+.|.|||++....|+.++|.|.+||++|||+.|+.||...+. +.+.+.+.. +. +
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh-~kLFeLIl~---ed-----~----- 385 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH-EKLFELILM---ED-----L----- 385 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch-hHHHHHHHh---hh-----c-----
Confidence 345566889999999999999999999999999999999999999999985431 122222211 11 1
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMI 1078 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~ 1078 (1109)
. .+.....+...++...+..||.+|. .+.||.++-.
T Consensus 386 k----FPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~F 426 (516)
T KOG0690|consen 386 K----FPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRF 426 (516)
T ss_pred c----CCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhh
Confidence 1 1111112345678888999999994 4777776643
No 363
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=1.5e-31 Score=299.90 Aligned_cols=257 Identities=26% Similarity=0.409 Sum_probs=197.2
Q ss_pred cCCCCCceEecCCcceEEEEEecC-CcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLAN-GEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|++.+.||+|+||+||+|.+++ ++.||||.++.... ......+..|+.++.+. +|+||+++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 568889999999999999999764 89999999974422 22345667788777666 5999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
||++ +++.+++..... .+++..+..++.|++.|++|||+. .+|+||||+|+||+++.++.+||+|||.+......
T Consensus 94 e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9985 577777655333 389999999999999999999931 48999999999999999999999999999765422
Q ss_pred CCCCccccccccceeccccccCCC----CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMK----VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
.......++..|+|||++.+.. ++.++||||||+++|||++|+.||...... .+..........+..+.
T Consensus 169 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~-- 241 (296)
T cd06618 169 --KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---FEVLTKILQEEPPSLPP-- 241 (296)
T ss_pred --CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---HHHHHHHhcCCCCCCCC--
Confidence 1223345788999999987654 789999999999999999999999753211 12222222221111000
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.......+.+++.+||+.||++||++.+++++.+..
T Consensus 242 ---------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~ 277 (296)
T cd06618 242 ---------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277 (296)
T ss_pred ---------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 001224578999999999999999999999887644
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=2e-31 Score=304.91 Aligned_cols=265 Identities=24% Similarity=0.305 Sum_probs=199.9
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD----- 873 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 873 (1109)
..++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++|+||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4578999999999999999999854 7899999998643333333456889999999999999999999987654
Q ss_pred -ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 874 -SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 874 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
..++||||+ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++++|||+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 348999999 77998887642 2899999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCc
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTS 1031 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1109)
+..... ......+++.|+|||++.+ ..++.++||||+|+++|++++|+.||...... ..............
T Consensus 165 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~ 236 (343)
T cd07880 165 ARQTDS----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL----DQLMEIMKVTGTPS 236 (343)
T ss_pred cccccc----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCC
Confidence 986542 2233467889999998876 45889999999999999999999999753321 11111111111000
Q ss_pred hhhhhhcchh-----------------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1032 ELFDKRLDLS-----------------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1032 ~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
..+...+... ..........+.+++.+|++.||++|||+.+++++-+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~ 302 (343)
T cd07880 237 KEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFE 302 (343)
T ss_pred HHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHh
Confidence 0010000000 000011233578999999999999999999999775443
No 365
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.4e-31 Score=302.74 Aligned_cols=269 Identities=27% Similarity=0.323 Sum_probs=196.3
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC------
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD------ 873 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 873 (1109)
.++|++.++||+|+||.||+|++. +++.||+|++............+.+|++++++++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999865 6899999998754333333456788999999999999999999875543
Q ss_pred --ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecc
Q 001274 874 --SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFG 951 (1109)
Q Consensus 874 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 951 (1109)
..++||||+.+ ++...+..... .+++..+..++.|+++||+||| +.+++||||||+||++++++.++|+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~--~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSV--KLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCc
Confidence 35899999964 77777765433 3899999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCC----------CccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHH
Q 001274 952 LAKLIDLPYSK----------SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWV 1020 (1109)
Q Consensus 952 ~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~ 1020 (1109)
+++........ ......+++.|+|||++.+. .++.++||||+||++|||++|+.||.+...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99765422111 11233567889999987654 58899999999999999999999997543221111111
Q ss_pred HHhhhccCC----------Cch--hhhhhcchh-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1021 RRSIHEMVP----------TSE--LFDKRLDLS-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1021 ~~~~~~~~~----------~~~--~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
. ......+ ... ......... ..........+.+++.+|++.+|++|||+.|++.+
T Consensus 241 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 241 K-LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred H-HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1 1110000 000 000000000 00001112457899999999999999999999865
No 366
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.6e-31 Score=303.67 Aligned_cols=268 Identities=24% Similarity=0.327 Sum_probs=201.9
Q ss_pred HHHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe-CCce
Q 001274 798 LEATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH-QDSN 875 (1109)
Q Consensus 798 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 875 (1109)
...+++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.+|++++++++||||+++.+++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 346788999999999999999999865 78999999886443333445678899999999999999999999876 4578
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++|+||+ +++|.+++.... +++.....++.|+++|++||| +.+++||||+|+||+++.++.++|+|||.+..
T Consensus 86 ~lv~e~~-~~~L~~~~~~~~----~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSRP----LEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEeehh-ccCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 8999998 568988886432 788888899999999999999 78999999999999999999999999999875
Q ss_pred ccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 956 IDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
.. .......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||........... +...... +..++.
T Consensus 158 ~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~-~~~~~~~--~~~~~~ 230 (328)
T cd07856 158 QD----PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSI-ITDLLGT--PPDDVI 230 (328)
T ss_pred cC----CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHhCC--CCHHHH
Confidence 43 12234467889999998766 5689999999999999999999999975432111111 1110000 001110
Q ss_pred hh-----------hcchhhccc-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1035 DK-----------RLDLSAKRT-----VEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1035 ~~-----------~~~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.. ......... ......+.+++.+|++.+|++||++.+++.+-+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~ 292 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA 292 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccc
Confidence 00 000000000 11235688999999999999999999999885443
No 367
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.2e-31 Score=302.34 Aligned_cols=252 Identities=29% Similarity=0.434 Sum_probs=198.1
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.|...+.||+|+||.||+|+.. +++.||+|.+..... ......++.+|+++++.++|+|++++++++...+..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 4666788999999999999965 678899999864322 22334568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+. |++.+++..... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++.....
T Consensus 96 ~~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-- 167 (308)
T cd06634 96 YCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 167 (308)
T ss_pred ccC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecC--
Confidence 996 688777754433 3889999999999999999999 77999999999999999999999999999876542
Q ss_pred CCCccccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
.....++..|+|||++. ...++.++||||+||++|||++|+.||...... ...........+..
T Consensus 168 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~------ 234 (308)
T cd06634 168 ---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPAL------ 234 (308)
T ss_pred ---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH----HHHHHHhhcCCCCc------
Confidence 12346788999999875 356788999999999999999999998753211 11111111111100
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
........+.+++.+||+.+|++||++.+++++.+...
T Consensus 235 ------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 235 ------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred ------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 01122345779999999999999999999999876655
No 368
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=4.6e-31 Score=292.96 Aligned_cols=248 Identities=23% Similarity=0.234 Sum_probs=190.0
Q ss_pred eEecCCcceEEEEEec-CCcEEEEEEeeccCCCc-chhHHHHHHHH---HhccCCCCceeeEEEEEEeCCceEEEEEecc
Q 001274 809 VIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGA-TADNSFLAEIS---TLGKIRHRNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
.||+|+||.||+|+.. +++.||+|.+....... .....+..|.. .++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3799999999999864 58899999987543221 12223344433 4455689999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCC
Q 001274 884 NGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKS 963 (1109)
Q Consensus 884 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 963 (1109)
+|+|.+++.... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++...... .
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---~ 151 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---K 151 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---C
Confidence 999999887544 3899999999999999999999 779999999999999999999999999998755321 2
Q ss_pred ccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhh
Q 001274 964 MSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSA 1042 (1109)
Q Consensus 964 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1109)
.....|+..|+|||++.++ .++.++||||+||++|||++|+.||....... ...............
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~------------ 218 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVEL------------ 218 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc-hHHHHHHhhccCCCC------------
Confidence 2345789999999998754 68999999999999999999999997643211 111111111111000
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHHHh
Q 001274 1043 KRTVEEMTLFLKIALFCSSTSPLNRP-----TMREVIAMMIDA 1080 (1109)
Q Consensus 1043 ~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~~~ 1080 (1109)
.......+.+++.+|+..+|++|| ++.+++++-+..
T Consensus 219 --~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~ 259 (278)
T cd05606 219 --PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFR 259 (278)
T ss_pred --CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence 011124678999999999999999 999999875443
No 369
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-32 Score=289.48 Aligned_cols=266 Identities=25% Similarity=0.317 Sum_probs=207.9
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-C-C----ceeeEEEEEEeCC
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-H-R----NIVKLYGFCYHQD 873 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~~~ 873 (1109)
+++|.+...+|+|.||.|-++.+. .+..||||+++... .-.++.+-|+++++++. + | -+|.+.+||...+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 579999999999999999999865 57899999997332 23455677999999993 2 2 4788999999999
Q ss_pred ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC------------
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE------------ 941 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~------------ 941 (1109)
+.|+|+|.+ |-|+.+++..+... .++...++.|+.|++++++||| +.+++|.||||+||++.+
T Consensus 165 hiCivfell-G~S~~dFlk~N~y~-~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKENNYI-PFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred ceEEEEecc-ChhHHHHhccCCcc-ccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCc
Confidence 999999999 67999999886643 5999999999999999999999 889999999999999931
Q ss_pred --------CCceEEeeccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccC
Q 001274 942 --------EFQAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELG 1013 (1109)
Q Consensus 942 --------~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~ 1013 (1109)
+..++++|||.|+... ......+.|..|+|||++.+-.|+.++||||+|||++|+.||...|+..+.-
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~----e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDH----EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred cceeccCCCcceEEEecCCcceec----cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 3458999999998643 3346778999999999999999999999999999999999999999876522
Q ss_pred CcHHHHHHHhhhccCCCchhhhhh-------------------------------cchhhcccHHHHHHHHHHHHhccCC
Q 001274 1014 GDLVTWVRRSIHEMVPTSELFDKR-------------------------------LDLSAKRTVEEMTLFLKIALFCSST 1062 (1109)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~li~~cl~~ 1062 (1109)
+.+ ..+.... +..|. .++.+. +.........+...+++++.+|+..
T Consensus 316 EHL-aMMerIl-Gp~P~-~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 316 EHL-AMMERIL-GPIPS-RMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred HHH-HHHHHhh-CCCcH-HHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 211 2222221 12211 111111 0001112345566799999999999
Q ss_pred CCCCCCCHHHHHHHHHHhh
Q 001274 1063 SPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1063 dP~~RPt~~evl~~L~~~~ 1081 (1109)
||.+|+|++|++.+-....
T Consensus 393 DP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 393 DPARRITLREALSHPFFAR 411 (415)
T ss_pred CccccccHHHHhcCHHhhc
Confidence 9999999999998876543
No 370
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=277.15 Aligned_cols=257 Identities=23% Similarity=0.282 Sum_probs=201.8
Q ss_pred hcCCCCC-ceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEe----CC
Q 001274 801 TGNFSEG-AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYH----QD 873 (1109)
Q Consensus 801 ~~~~~~~-~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~ 873 (1109)
+++|++. ++||-|-.|.|-.+..+ +++.+|+|++. ......+|++..-.. .|||||.++++|.. ..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-------Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-------DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-------cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 3455543 57999999999999765 68999999986 234456888876555 79999999999864 33
Q ss_pred ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---CCceEEeec
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE---EFQAHVGDF 950 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DF 950 (1109)
...+|||.|+||.|...+..++.. .+++.++..|++||+.|+.||| +.+|.||||||+|+|... +-.+|++||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~-afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQ-AFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccc-cchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccc
Confidence 456899999999999999887654 4999999999999999999999 889999999999999964 457999999
Q ss_pred cccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc-c--
Q 001274 951 GLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE-M-- 1027 (1109)
Q Consensus 951 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~-~-- 1027 (1109)
|+|+.... .....+.+-|+.|.|||++-..+|+..+|+||+||++|-|+.|..||...... .+.--++..+.. .
T Consensus 209 GFAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~-aispgMk~rI~~gqy~ 285 (400)
T KOG0604|consen 209 GFAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-AISPGMKRRIRTGQYE 285 (400)
T ss_pred ccccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-cCChhHHhHhhccCcc
Confidence 99997653 34556778899999999999999999999999999999999999999875532 211112222211 1
Q ss_pred CCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1028 VPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
+|..++ ....+...++|+.++..+|++|.|..+++++-|-....
T Consensus 286 FP~pEW------------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 286 FPEPEW------------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred CCChhH------------hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 111111 12234567899999999999999999999988765443
No 371
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=4e-31 Score=298.69 Aligned_cols=248 Identities=30% Similarity=0.447 Sum_probs=195.2
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
|...++||+|+||+||+|+.. +++.||+|++...... ......+.+|+++++.++|+|++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999864 6889999998654322 22345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+. |++.+++..... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+....
T Consensus 103 ~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~---- 172 (313)
T cd06633 103 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS---- 172 (313)
T ss_pred CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccC----
Confidence 96 578777765433 3899999999999999999999 7799999999999999999999999999986432
Q ss_pred CCccccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 962 KSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
......++..|+|||++. ...++.++||||+||++|||++|..||..... ............+. ..
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~----~~~~~~~~~~~~~~--~~---- 241 (313)
T cd06633 173 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNDSPT--LQ---- 241 (313)
T ss_pred -CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcCCCC--CC----
Confidence 123456888999999974 45688999999999999999999999875321 12222211111111 00
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.......+.+++.+||+.+|++||++.+++.+-+
T Consensus 242 ------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~ 275 (313)
T cd06633 242 ------SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDF 275 (313)
T ss_pred ------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 0111234678999999999999999999997743
No 372
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=5.8e-32 Score=300.81 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=202.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 878 (1109)
++|...+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999865 689999999865322 2233567889999999998 99999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+++++|.+++.... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999998764 3899999999999999999999 77999999999999999999999999999986543
Q ss_pred CCC-------------------CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHH
Q 001274 959 PYS-------------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTW 1019 (1109)
Q Consensus 959 ~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~ 1019 (1109)
... .......++..|+|||+..+..++.++||||+|+++|++++|+.||...... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~ 230 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----LT 230 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH----HH
Confidence 221 1123345788999999998888999999999999999999999999854311 11
Q ss_pred HHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCH----HHHHHH
Q 001274 1020 VRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTM----REVIAM 1076 (1109)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~----~evl~~ 1076 (1109)
........... .......+.+++.+||+.+|++||++ .+++++
T Consensus 231 ~~~~~~~~~~~--------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 231 FQKILKLEYSF--------------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHhcCCCC--------------CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 11111111111 11113457899999999999999999 887765
No 373
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=3.3e-31 Score=291.29 Aligned_cols=245 Identities=23% Similarity=0.247 Sum_probs=188.2
Q ss_pred ceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHh-ccCCCCceeeEEEEEEeCCceEEEEEeccC
Q 001274 808 AVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTL-GKIRHRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+.||+|+||.||+|+.. +++.||+|++...... ......+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999864 6899999998643221 11223445555544 455899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
++|.+++..... +++..+..++.|++.||.||| +.+++||||+|+||+++.++.++|+|||+++.... .
T Consensus 82 ~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~ 150 (260)
T cd05611 82 GDCASLIKTLGG---LPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----N 150 (260)
T ss_pred CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----c
Confidence 999999976543 889999999999999999999 77999999999999999999999999999875432 2
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
....++..|+|||++.+..++.++||||+|+++|||++|..||..... ................. .
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~----------~ 216 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP----DAVFDNILSRRINWPEE----------V 216 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcccCCCCc----------c
Confidence 234578899999999888899999999999999999999999975321 12222111111100000 0
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHH---HHHHHH
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMR---EVIAMM 1077 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~---evl~~L 1077 (1109)
.......+.+++.+||+.+|++||++. |++.+-
T Consensus 217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~ 252 (260)
T cd05611 217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHP 252 (260)
T ss_pred cccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcCh
Confidence 111234578999999999999999664 555543
No 374
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=2.4e-31 Score=303.86 Aligned_cols=269 Identities=23% Similarity=0.288 Sum_probs=199.2
Q ss_pred cCCC-CCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcc------------hhHHHHHHHHHhccCCCCceeeEEE
Q 001274 802 GNFS-EGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGAT------------ADNSFLAEISTLGKIRHRNIVKLYG 867 (1109)
Q Consensus 802 ~~~~-~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~l~~ 867 (1109)
++|. +.+.||+|+||+||+|++. +++.||||+++....... ....+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4565 4577999999999999865 689999999864422210 1125778999999999999999999
Q ss_pred EEEeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 001274 868 FCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHV 947 (1109)
Q Consensus 868 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 947 (1109)
++...+..++||||++ |+|.+++..... +++.....++.|++.|++||| +.+++||||+|+||+++.++.+++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIR---LTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEE
Confidence 9999999999999996 699999865433 899999999999999999999 789999999999999999999999
Q ss_pred eeccccccccCCC-------------CCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccC
Q 001274 948 GDFGLAKLIDLPY-------------SKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELG 1013 (1109)
Q Consensus 948 ~DFG~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~ 1013 (1109)
+|||.++....+. ........++..|+|||++.+. .++.++||||+||++|||++|+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999997654111 1111233467889999998764 4689999999999999999999999754322
Q ss_pred CcHHHHHHHhhhccCCCchhhhhhc------------chh-hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1014 GDLVTWVRRSIHEMVPTSELFDKRL------------DLS-AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
+....... ..... ....+.... ... ..........+.+++.+|++.+|++||+++|++.+-+..
T Consensus 241 ~~~~~i~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~ 317 (335)
T PTZ00024 241 DQLGRIFE-LLGTP--NEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317 (335)
T ss_pred HHHHHHHH-HhCCC--chhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence 11111111 11100 000000000 000 000111234577999999999999999999999887654
No 375
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=2.5e-31 Score=296.29 Aligned_cols=264 Identities=23% Similarity=0.306 Sum_probs=197.1
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCceEEEEEe
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
|++.+.||+|+||+||+|+.. +++.||||++...... .......+|+..+++++ |+|++++++++..++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 567789999999999999975 5789999998644322 23334567999999998 99999999999999999999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+ +|++.+++..... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~-~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~-- 152 (283)
T cd07830 80 M-EGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR-- 152 (283)
T ss_pred C-CCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCC--
Confidence 9 8899998876542 23899999999999999999999 779999999999999999999999999999865421
Q ss_pred CCccccccccceecccccc-CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCC--------Cch
Q 001274 962 KSMSAIAGSYGYIAPEYAY-TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVP--------TSE 1032 (1109)
Q Consensus 962 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--------~~~ 1032 (1109)
.......++..|+|||++. ...++.++||||||+++|||++|+.||......+....... ....... ...
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 153 PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICS-VLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHH-hcCCCChhhhhhHhhhhc
Confidence 2223456788999999875 44578999999999999999999999865432111111100 0000000 000
Q ss_pred hhhhhcchh-----hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1033 LFDKRLDLS-----AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1033 ~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.++...... ..........+.+++.+||+.+|++|||+.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000 00001113568899999999999999999999875
No 376
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=280.62 Aligned_cols=265 Identities=24% Similarity=0.352 Sum_probs=201.2
Q ss_pred CHHHHHHHhcCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEE
Q 001274 793 KYHNLLEATGNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCY 870 (1109)
Q Consensus 793 ~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 870 (1109)
++++.+.-++ +.||+|+|+.|--+. ..+|..||||++... .......+.+|++++.+. .|+||+.++++|.
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 4555554444 479999999999886 678999999999744 334567788999999999 6999999999999
Q ss_pred eCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC---ceEE
Q 001274 871 HQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF---QAHV 947 (1109)
Q Consensus 871 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 947 (1109)
+++..|+|||.|.||.|..++++.+. +++.++.++.++|+.||+||| .+||.|||+||+|||-.... -+||
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~~~---F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKRKH---FNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHhhh---ccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceee
Confidence 99999999999999999999988765 999999999999999999999 88999999999999996654 4899
Q ss_pred eeccccccccCC--C----CCCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccC---
Q 001274 948 GDFGLAKLIDLP--Y----SKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITGKSPVQSLELG--- 1013 (1109)
Q Consensus 948 ~DFG~a~~~~~~--~----~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~--- 1013 (1109)
+||.++...... - .....+.+|+-.|||||+.. ...|+.++|.||+|||+|-|+.|..||.+.-..
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 999988654311 1 11224457888999999764 235899999999999999999999999875421
Q ss_pred ---CcHH----HHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1014 ---GDLV----TWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1014 ---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
+... ..+-+.+++.. -++-++.. .....+..+++...+..|+.+|.++.+++.+-+-
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGk--YeFPdkdW-------ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~ 364 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGK--YEFPDKDW-------AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV 364 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccC--CcCChhhh-------HHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence 1111 11111122111 01111111 1122345577888888999999999999986543
No 377
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-32 Score=287.97 Aligned_cols=257 Identities=26% Similarity=0.354 Sum_probs=199.2
Q ss_pred cCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcch-----hHHHHHHHHHhccCCCCceeeEEEEEEe-CCc
Q 001274 802 GNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATA-----DNSFLAEISTLGKIRHRNIVKLYGFCYH-QDS 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 874 (1109)
++|-...+||+|||+.||+|. ....+.||||+-.......++ .+...+|..|.+.++||.||++++++.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 477788899999999999997 456889999987644322222 2346689999999999999999999975 567
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC---CCCceEEeecc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD---EEFQAHVGDFG 951 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DFG 951 (1109)
.|-|.|||+|.+|+-|++.++- +++++++.|+.||+.||.||.+. +.+|||-||||.|||+- .-|.+||+|||
T Consensus 543 FCTVLEYceGNDLDFYLKQhkl---mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKL---MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhh---hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 7899999999999999987764 89999999999999999999976 88999999999999994 45789999999
Q ss_pred ccccccCCCCCCc------cccccccceeccccccCC----CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHH
Q 001274 952 LAKLIDLPYSKSM------SAIAGSYGYIAPEYAYTM----KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVR 1021 (1109)
Q Consensus 952 ~a~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~ 1021 (1109)
+++.++.+..... ....||..|++||.+.-+ +.+.|+||||.||++|+.+.|+.||.......++.+...
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 9998875443321 345799999999987633 468899999999999999999999986443333222111
Q ss_pred --HhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1022 --RSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1022 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
....-.+|..+.+ ..+...||.+|+.+.-++|....++..+
T Consensus 699 IlkAtEVqFP~KPvV--------------sseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 699 ILKATEVQFPPKPVV--------------SSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred hhcceeccCCCCCcc--------------CHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 0011111221111 1245689999999999999888777644
No 378
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=1.3e-31 Score=295.14 Aligned_cols=246 Identities=27% Similarity=0.353 Sum_probs=194.8
Q ss_pred EecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 810 IGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
||+|+||.||+|++. +++.||+|++..... .....+.+.+|++++++++|+||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999976 489999999864322 123456788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCC------
Q 001274 888 GEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYS------ 961 (1109)
Q Consensus 888 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~------ 961 (1109)
.+++.... .+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99997654 3899999999999999999999 77999999999999999999999999999875432211
Q ss_pred -CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcch
Q 001274 962 -KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDL 1040 (1109)
Q Consensus 962 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1109)
.......++..|+|||+..+..++.++||||+|+++||+++|+.||.... ..+..........+...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~-------- 222 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET----PEEIFQNILNGKIEWPE-------- 222 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCcCCCc--------
Confidence 12234567889999999998889999999999999999999999997433 22222221111111110
Q ss_pred hhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1041 SAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1041 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.......+.+++.+||+.+|++|||+.++.+.+
T Consensus 223 ----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 223 ----DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred ----cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 000134678999999999999999994444444
No 379
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.3e-30 Score=297.30 Aligned_cols=266 Identities=23% Similarity=0.291 Sum_probs=195.9
Q ss_pred CCCCCceEecCCcceEEEEEec-C--CcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeC----Cc
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-N--GEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQ----DS 874 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 874 (1109)
+|++.+.||+|+||.||+|+.. + +..||+|++..........+.+.+|+++++++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999865 4 77899999874433333456788999999999 599999999875432 34
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.++++||+. ++|.+++..... +++..+..++.||+.||+||| +.+++||||||+||+++.++.+||+|||.++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQP---LTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678889885 689998865443 899999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCC---CCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-C
Q 001274 955 LIDLPYS---KSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-P 1029 (1109)
Q Consensus 955 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~ 1029 (1109)
....... .......|+..|+|||+..+ ..++.++||||+||++|+|++|+.||...... ........... +
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~ 229 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV----DQLNQILQVLGTP 229 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH----HHHHHHHHHhCCC
Confidence 6542211 11234578999999998765 46899999999999999999999999754311 11111111000 0
Q ss_pred Cchhhhh-----------hcchhh-----cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1030 TSELFDK-----------RLDLSA-----KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1030 ~~~~~~~-----------~~~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
..+.+.. ...... .........+.+++.+|++.+|++|||+.|++.+-+-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~ 295 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 0000000 000000 0001113468899999999999999999999988653
No 380
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-32 Score=282.14 Aligned_cols=267 Identities=18% Similarity=0.264 Sum_probs=210.6
Q ss_pred HHHHHHhcCCCCCceEecCCcceEEEEEec------CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEE
Q 001274 795 HNLLEATGNFSEGAVIGRGACGTVYKATLA------NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGF 868 (1109)
Q Consensus 795 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 868 (1109)
.++.....+++....+-+|.||.||.|.|. +.+.|.||.++.. ...-....+..|.-.+..+.|||+..+.++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-ASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc-ccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 345555667888889999999999999653 3456788888633 233445678899999999999999999999
Q ss_pred EEeC-CceEEEEEeccCCCHHHHhc-----cCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC
Q 001274 869 CYHQ-DSNLLLYEYMENGSLGEQLH-----GNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE 942 (1109)
Q Consensus 869 ~~~~-~~~~lv~e~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~ 942 (1109)
+.++ +..+++|.++.-|+|..++. +......++..+...++.|++.|++||| ++++||.||.++|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhh
Confidence 8764 56789999999999999998 3333345778888999999999999999 8899999999999999999
Q ss_pred CceEEeeccccccccCCCCCC-ccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHH
Q 001274 943 FQAHVGDFGLAKLIDLPYSKS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWV 1020 (1109)
Q Consensus 943 ~~~kl~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~ 1020 (1109)
.++||+|=.++|..-..+... ....-.+..||+||.+....|+.++|||||||++|||+| |+.|+...++.+ +
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-----m 507 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-----M 507 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-----H
Confidence 999999999998664333332 344557889999999999999999999999999999999 999987543211 1
Q ss_pred HHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 001274 1021 RRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQ 1082 (1109)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 1082 (1109)
..++.+.... ..+..++.+++.+|.-||..+|++||+++|++.-|.+...
T Consensus 508 ~~ylkdGyRl------------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 508 EHYLKDGYRL------------AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred HHHHhcccee------------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 2222222111 1233455678899999999999999999999998877543
No 381
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=3.7e-31 Score=294.69 Aligned_cols=265 Identities=27% Similarity=0.356 Sum_probs=200.8
Q ss_pred CCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
|+..+.||+|+||.||+|+.. +++.||+|++..........+.+..|++++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556778999999999999865 5899999999865433444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
+ ++|.+++..... .+++..+..++.+++.|++||| +.+|+||||+|+||+++.++.++|+|||.++...... .
T Consensus 81 ~-~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~-~ 153 (282)
T cd07829 81 D-MDLKKYLDKRPG--PLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL-R 153 (282)
T ss_pred C-cCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-c
Confidence 7 599999987532 3899999999999999999999 7799999999999999999999999999998664322 1
Q ss_pred CccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC--------C---C
Q 001274 963 SMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV--------P---T 1030 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--------~---~ 1030 (1109)
......++..|+|||++.+. .++.++||||+||++|||++|+.||............. ....... . .
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIF-QILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-HHhCCCcHHHHHhhcccccc
Confidence 22334567789999998776 78999999999999999999999997533211111111 1000000 0 0
Q ss_pred chhhhhhcchhh-cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1031 SELFDKRLDLSA-KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1031 ~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
...+........ .........+.+++.+||+.+|++||++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 000000000000 0011113568899999999999999999999875
No 382
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.5e-31 Score=306.12 Aligned_cols=265 Identities=26% Similarity=0.334 Sum_probs=201.4
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS---- 874 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 874 (1109)
..++|++.+.||+|+||.||+|+.. +++.||||++..........+.+.+|+.++++++|+|++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3468999999999999999999975 68899999986443333344667889999999999999999998876655
Q ss_pred --eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 875 --NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 875 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
.++|+||+ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++|+|||.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccc
Confidence 79999999 67999988753 2899999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC-CC
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV-PT 1030 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~ 1030 (1109)
+...... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||.+... ............ +.
T Consensus 165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~----~~~~~~i~~~~~~~~ 236 (343)
T cd07851 165 ARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH----IDQLKRIMNLVGTPD 236 (343)
T ss_pred ccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHhcCCCC
Confidence 9865422 334567889999998765 3678999999999999999999999975332 111111111110 11
Q ss_pred chhhhhhcch-----------h-----hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1031 SELFDKRLDL-----------S-----AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1031 ~~~~~~~~~~-----------~-----~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.....+.... . ..........+.+++.+|++.+|++|||+.+++++-+-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~ 302 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcc
Confidence 1111100000 0 000011245688999999999999999999999875444
No 383
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=294.66 Aligned_cols=249 Identities=22% Similarity=0.309 Sum_probs=200.2
Q ss_pred CceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCC
Q 001274 807 GAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENG 885 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 885 (1109)
.+.||+|.||+||-|++ ++|+.||||++.+-.-....+....+|+.|++.++||.||.+...|+..+..++|||.+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 36899999999999985 47999999999766566666788999999999999999999999999999999999999665
Q ss_pred CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC---CceEEeeccccccccCCCCC
Q 001274 886 SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE---FQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 886 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~ 962 (1109)
-|+-.+...+.+ +++.....+..||+.||.||| -++|+|+||||+|||+.+. ..+||+|||+|+.+....
T Consensus 649 MLEMILSsEkgR--L~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-- 721 (888)
T KOG4236|consen 649 MLEMILSSEKGR--LPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-- 721 (888)
T ss_pred HHHHHHHhhccc--chHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhh--
Confidence 555555544443 899999999999999999999 7899999999999999543 479999999999887332
Q ss_pred CccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhh
Q 001274 963 SMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSA 1042 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1109)
-....+||+.|.|||++..+.|...-||||.||++|--++|..||.. ++++.+.++.... +.|..++
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE---dEdIndQIQNAaF-MyPp~PW--------- 788 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE---DEDINDQIQNAAF-MYPPNPW--------- 788 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC---ccchhHHhhcccc-ccCCCch---------
Confidence 23567899999999999999999999999999999999999999975 4455555553211 1121111
Q ss_pred cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1043 KRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1043 ~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
.+......++|...++..=++|-+..+.+.+.|
T Consensus 789 ---~eis~~AidlIn~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 789 ---SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred ---hhcCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence 111234567888888888888888877765543
No 384
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=1.3e-30 Score=320.91 Aligned_cols=147 Identities=32% Similarity=0.399 Sum_probs=131.2
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCC-CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGE-GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
++|.+.++||+|+||+||+|++. +++.||||+++.... .......+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999976 689999999974322 2223467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
||+++++|.+++..... +++..++.++.||+.||+||| ..+||||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~~---l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYGY---FDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999976543 788999999999999999999 7799999999999999999999999999885
No 385
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=5.5e-31 Score=301.40 Aligned_cols=268 Identities=23% Similarity=0.315 Sum_probs=195.2
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeC--------
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQ-------- 872 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 872 (1109)
++|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 68999999999999999999864 689999999875433 3456788999999999999999999776543
Q ss_pred ------CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC-CCCce
Q 001274 873 ------DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD-EEFQA 945 (1109)
Q Consensus 873 ------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~ 945 (1109)
...++||||++ ++|.+++... .+++..+..++.||++|+.||| +.+|+||||||+||+++ .++.+
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceE
Confidence 34689999997 5898888643 2889999999999999999999 77999999999999997 45678
Q ss_pred EEeeccccccccCCCCCC--ccccccccceeccccccC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHH
Q 001274 946 HVGDFGLAKLIDLPYSKS--MSAIAGSYGYIAPEYAYT-MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRR 1022 (1109)
Q Consensus 946 kl~DFG~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~ 1022 (1109)
+++|||.++......... .....++..|+|||++.+ ..++.++||||+||++|||++|+.||.+.............
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999998654221111 123357889999998654 56889999999999999999999999754321111111110
Q ss_pred hhhccC--------CCchhhhhhcchh----hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1023 SIHEMV--------PTSELFDKRLDLS----AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1023 ~~~~~~--------~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
...... ............. ..........+.+++.+|++.||++|||+.|++++-+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~ 303 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcc
Confidence 000000 0000000000000 00001122457799999999999999999999987554
No 386
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=7.2e-31 Score=288.64 Aligned_cols=252 Identities=23% Similarity=0.307 Sum_probs=196.1
Q ss_pred CCCCCceEecCCcceEEEEEecC-CcEEEEEEeeccC---CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLAN-GEVIAVKKIKLRG---EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
+|.+.++||+|+||+||+|++.. +..+++|+++... ........+..|+.++++++||||+++++++...+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57888999999999999998653 4556666654321 1222344677899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccCC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 879 YEYMENGSLGEQLHGNK-QTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
|||+++++|.+++.... ....+++..+..++.|++.|+.||| +.+++|+||+|+||+++. +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999886422 1234899999999999999999999 789999999999999975 569999999997654
Q ss_pred CCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
.. ........++..|+|||...+..++.++||||+|+++|+|++|..||... ..............+.
T Consensus 157 ~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~------- 224 (260)
T cd08222 157 GS-CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ----NFLSVVLRIVEGPTPS------- 224 (260)
T ss_pred CC-cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHHHHHcCCCCC-------
Confidence 22 12223456788999999998888999999999999999999999998642 2222222222221111
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
........+.+++.+||+.+|++||++.|++++
T Consensus 225 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 225 ------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 011223467889999999999999999999876
No 387
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-33 Score=275.58 Aligned_cols=260 Identities=27% Similarity=0.355 Sum_probs=199.9
Q ss_pred CCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEec
Q 001274 805 SEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 805 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
+....||.|+||+|++-.++ .|+..|||++..... ..+.+++..|.+...+- +.||||+++|++..++..++.||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 34457999999999999865 799999999986544 34567788888875554 7899999999999999999999999
Q ss_pred cCCCHHHHhccC--CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 883 ENGSLGEQLHGN--KQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 883 ~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
. .|++.+.... ..+..+++...-.|..-.++||+||.+ +.+|||||+||+|||++..|.+|++|||.+-.+..
T Consensus 146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~-- 220 (361)
T KOG1006|consen 146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD-- 220 (361)
T ss_pred h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHH--
Confidence 5 5776554221 012238888888898899999999986 45899999999999999999999999999876542
Q ss_pred CCCccccccccceeccccccC--CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 961 SKSMSAIAGSYGYIAPEYAYT--MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
+...+.-.|...|||||.+.. ..|+.++||||+|+++||+.||+.||..+. ...+.+.....+..|... .+
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~---svfeql~~Vv~gdpp~l~-~~--- 293 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD---SVFEQLCQVVIGDPPILL-FD--- 293 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH---HHHHHHHHHHcCCCCeec-Cc---
Confidence 223344468888999998863 358999999999999999999999998653 355556655555543211 11
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
....+....+..++..|+..|-..||.+.++.++-.-.+
T Consensus 294 ----~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 294 ----KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred ----ccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 112223346789999999999999999999987644333
No 388
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=281.16 Aligned_cols=242 Identities=24% Similarity=0.277 Sum_probs=191.6
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 878 (1109)
.+|....+||+|+||+|.+|..+ +.+.||||+++..... .+..+--+.|-+++... +-|.++++..+|+..+..|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 57888999999999999999865 4678999999865322 22233445677777665 568999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|||+.||+|-..+++.+. +.+..+...|..||-||-+|| +++||+||||.+|||+|.+|++||+|||+++.--
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni- 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI- 501 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccc-
Confidence 999999999999988765 888899999999999999999 8899999999999999999999999999998532
Q ss_pred CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhc
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRL 1038 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1109)
-......+.+||+.|+|||++...+|+.++|.|||||++|||+.|+.||++.. -.+..+........
T Consensus 502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD----E~elF~aI~ehnvs--------- 568 (683)
T KOG0696|consen 502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED----EDELFQAIMEHNVS--------- 568 (683)
T ss_pred cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHHccCc---------
Confidence 12344567899999999999999999999999999999999999999998633 22222222222211
Q ss_pred chhhcccHHHHHHHHHHHHhccCCCCCCCC
Q 001274 1039 DLSAKRTVEEMTLFLKIALFCSSTSPLNRP 1068 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RP 1068 (1109)
++..-..+...+....+...|.+|.
T Consensus 569 -----yPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 569 -----YPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -----CcccccHHHHHHHHHHhhcCCcccc
Confidence 1111123344566667778888884
No 389
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=280.84 Aligned_cols=269 Identities=22% Similarity=0.297 Sum_probs=204.3
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-----C---CceeeEEEEEEe
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-----H---RNIVKLYGFCYH 871 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~ 871 (1109)
.++|.+.++||-|.|++||+|++. +.+.||+|+.+.. ..-.+..+.|++++++++ | .+||++++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 379999999999999999999864 6789999999832 223456778999999883 3 479999999976
Q ss_pred C----CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-----
Q 001274 872 Q----DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE----- 942 (1109)
Q Consensus 872 ~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~----- 942 (1109)
. .+.|+|+|+. |.+|..++.....+ .++...+.+|++||+.||.|||.+| +|||.||||+|||+..+
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~Yr-Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~ 229 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYR-GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPA 229 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchh
Confidence 4 4779999999 77999998765533 4999999999999999999999887 99999999999999200
Q ss_pred --------------------------------------------------------------------------------
Q 001274 943 -------------------------------------------------------------------------------- 942 (1109)
Q Consensus 943 -------------------------------------------------------------------------------- 942 (1109)
T Consensus 230 ~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~ 309 (590)
T KOG1290|consen 230 KDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRI 309 (590)
T ss_pred hhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 001274 943 -------------------------------------------------------------------------------- 942 (1109)
Q Consensus 943 -------------------------------------------------------------------------------- 942 (1109)
T Consensus 310 n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~ 389 (590)
T KOG1290|consen 310 NGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPEC 389 (590)
T ss_pred CccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcc
Confidence
Q ss_pred -CceEEeeccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccC-----CcH
Q 001274 943 -FQAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELG-----GDL 1016 (1109)
Q Consensus 943 -~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~-----~~~ 1016 (1109)
-+|||+|||-|+.... ..+.-..|..|+|||++.+..|+..+||||++|++|||+||...|+..... ++-
T Consensus 390 di~vKIaDlGNACW~~k----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH 465 (590)
T KOG1290|consen 390 DIRVKIADLGNACWVHK----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH 465 (590)
T ss_pred ceeEEEeeccchhhhhh----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence 0156666666665432 222334678899999999999999999999999999999999999865421 222
Q ss_pred HHHHHHhhhcc--------CCCchhhhhh-----------------cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHH
Q 001274 1017 VTWVRRSIHEM--------VPTSELFDKR-----------------LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMR 1071 (1109)
Q Consensus 1017 ~~~~~~~~~~~--------~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~ 1071 (1109)
...+-+....+ ....++++++ +...+....++..+|.+|+.-|++.+|++||||+
T Consensus 466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~ 545 (590)
T KOG1290|consen 466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAA 545 (590)
T ss_pred HHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHH
Confidence 22222111111 1122233221 1222556778889999999999999999999999
Q ss_pred HHHHHHHHh
Q 001274 1072 EVIAMMIDA 1080 (1109)
Q Consensus 1072 evl~~L~~~ 1080 (1109)
+.+++-|-.
T Consensus 546 ~cl~hPwLn 554 (590)
T KOG1290|consen 546 QCLKHPWLN 554 (590)
T ss_pred HHhcCcccc
Confidence 999987654
No 390
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2.9e-30 Score=281.95 Aligned_cols=242 Identities=26% Similarity=0.319 Sum_probs=195.0
Q ss_pred EecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCH
Q 001274 810 IGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSL 887 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 887 (1109)
||+|+||.||++... +++.||+|.+...... ......+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999875 5899999998754322 22456788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcccc
Q 001274 888 GEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAI 967 (1109)
Q Consensus 888 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 967 (1109)
.+++..... +++..+..++.|+++|+.|+| +.+++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~ 153 (250)
T cd05123 81 FSHLSKEGR---FSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTF 153 (250)
T ss_pred HHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCC
Confidence 999976543 899999999999999999999 7799999999999999999999999999998654221 223445
Q ss_pred ccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHH
Q 001274 968 AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVE 1047 (1109)
Q Consensus 968 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
.++..|+|||...+..++.++|+||+|+++|++++|+.||..... ............+....
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~-------------- 215 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR----KEIYEKILKDPLRFPEF-------------- 215 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHhcCCCCCCCC--------------
Confidence 678899999999988899999999999999999999999964322 22222222211111111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCH---HHHHHH
Q 001274 1048 EMTLFLKIALFCSSTSPLNRPTM---REVIAM 1076 (1109)
Q Consensus 1048 ~~~~~~~li~~cl~~dP~~RPt~---~evl~~ 1076 (1109)
....+.+++.+||..||++||++ .++.++
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 12356789999999999999999 555543
No 391
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=299.45 Aligned_cols=253 Identities=25% Similarity=0.380 Sum_probs=207.7
Q ss_pred HhcCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEe-----C
Q 001274 800 ATGNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYH-----Q 872 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~ 872 (1109)
-++.|++...||.|.+|.||+++ .++++.+|||+.. ...+..+++..|.++++.. .|||++.++|++.. +
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~---~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMD---PTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeec---CCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 34678888999999999999998 4578999999886 3344667788999999888 69999999999875 4
Q ss_pred CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
+..++|||||.+||..++++... ...+.|..+..|+..++.|+.||| ...++|||||-.|||++.++.||++|||+
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeee
Confidence 67899999999999999998876 345999999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCCCCCccccccccceeccccccCC-----CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhh-c
Q 001274 953 AKLIDLPYSKSMSAIAGSYGYIAPEYAYTM-----KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIH-E 1026 (1109)
Q Consensus 953 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~-~ 1026 (1109)
+...+.. .....+.+||+.|||||++... .|+..+|+||+|++..||-.|.+|+.++.+- +..+. .
T Consensus 170 SaQldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm-------raLF~Ip 241 (953)
T KOG0587|consen 170 SAQLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM-------RALFLIP 241 (953)
T ss_pred eeeeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-------hhhccCC
Confidence 9877632 3334567899999999998744 3778999999999999999999998765421 11111 1
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
..|... ........++|.++|..|+..|.++||++.+++++
T Consensus 242 RNPPPk---------Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 242 RNPPPK---------LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred CCCCcc---------ccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 111111 12345566789999999999999999999998765
No 392
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.4e-32 Score=269.73 Aligned_cols=273 Identities=23% Similarity=0.357 Sum_probs=201.7
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe--------C
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH--------Q 872 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 872 (1109)
+.|....+||+|.||+||+|+.+ +|+.||+|++-.......-.....+|++++..++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45666678999999999999865 57889998875443333344567899999999999999999988753 2
Q ss_pred CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccc
Q 001274 873 DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGL 952 (1109)
Q Consensus 873 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 952 (1109)
...|+||.+|+. +|.-.+.....+ ++..++.++++++..||.|+| +..|+|||+||.|+|++.+|.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr--~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVR--FSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcccc--ccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 346899999976 888888765443 899999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCC---CCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHH----hh
Q 001274 953 AKLIDLPY---SKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRR----SI 1024 (1109)
Q Consensus 953 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~----~~ 1024 (1109)
++.+..+. ....+..+.|..|++||.+.+. .|+.+.|||..||++.||+||.+-+++......+ ..+.. ..
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql-~~Is~LcGs~t 249 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQL-HLISQLCGSIT 249 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHH-HHHHHHhccCC
Confidence 98664322 2223456679999999998865 5899999999999999999999998865432221 11211 11
Q ss_pred hccCCCc---hhhhhh----cch-hhcccHHHH------HHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1025 HEMVPTS---ELFDKR----LDL-SAKRTVEEM------TLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1025 ~~~~~~~---~~~~~~----~~~-~~~~~~~~~------~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.+.+|.- +++... +.. ..+...+.. ....+++.+++..||.+|+++.+++.+-+.-.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 1111111 111111 000 000111111 24678999999999999999999998766543
No 393
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-30 Score=290.20 Aligned_cols=243 Identities=23% Similarity=0.260 Sum_probs=197.3
Q ss_pred hcCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 878 (1109)
++.|.....+|.|+|+.|-.+.+ .+++..+||++.... .+-.+|+.++... +||||+++.+.+.++.+.|+|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 66888888999999999998875 468899999997542 2233567666555 799999999999999999999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee-CCCCceEEeecccccccc
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL-DEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~DFG~a~~~~ 957 (1109)
||++.|+-+.+.+...+. +. .++..|+.+|+.|+.||| ++|+||||+||+|||+ +..++++|+|||.++...
T Consensus 395 ~e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred ehhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 999999988888876654 33 677889999999999999 7899999999999999 699999999999998765
Q ss_pred CCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 958 LPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 958 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
.. ..+-+-|..|.|||+.....|++++|+||+|+++|+|++|+.||.....+ .+.......+..
T Consensus 468 ~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~--------- 531 (612)
T KOG0603|consen 468 RS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKF--------- 531 (612)
T ss_pred hh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCcc---------
Confidence 33 33446688999999999999999999999999999999999999865433 111111111110
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.........+++.+|++.||.+||+|.++..+-+.
T Consensus 532 -------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 532 -------SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred -------ccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 11122356789999999999999999999999887
No 394
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=4.2e-30 Score=278.03 Aligned_cols=219 Identities=24% Similarity=0.253 Sum_probs=174.8
Q ss_pred CCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCHHHHh
Q 001274 813 GACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSLGEQL 891 (1109)
Q Consensus 813 G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 891 (1109)
|.||.||++++. +++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 899999999865 68999999987432 2334555555667999999999999999999999999999999998
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCcccccccc
Q 001274 892 HGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAIAGSY 971 (1109)
Q Consensus 892 ~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~ 971 (1109)
..... +++..+..++.|+++|++|+| +.+++||||||+||+++.++.++++|||.+...... .....++.
T Consensus 77 ~~~~~---l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~ 146 (237)
T cd05576 77 SKFLN---IPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVEN 146 (237)
T ss_pred HHhcC---CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCc
Confidence 76543 899999999999999999999 789999999999999999999999999988655421 22334567
Q ss_pred ceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHH
Q 001274 972 GYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTL 1051 (1109)
Q Consensus 972 ~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
.|+|||+..+..++.++||||+|+++|||++|+.|+...... ..... .... .......
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~--------~~~~----~~~~~~~ 204 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHT--------TLNI----PEWVSEE 204 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------ccccc--------ccCC----cccCCHH
Confidence 899999998888999999999999999999999887532100 00000 0000 0111235
Q ss_pred HHHHHHhccCCCCCCCCCH
Q 001274 1052 FLKIALFCSSTSPLNRPTM 1070 (1109)
Q Consensus 1052 ~~~li~~cl~~dP~~RPt~ 1070 (1109)
+.+++.+|++.||++||++
T Consensus 205 ~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHHccCCHHHhcCC
Confidence 7789999999999999997
No 395
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.2e-31 Score=283.71 Aligned_cols=259 Identities=21% Similarity=0.248 Sum_probs=212.0
Q ss_pred cCCCCCceEecCCcceEEEEEecCCc-EEEEEEeeccC-CCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGE-VIAVKKIKLRG-EGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~-~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
.+++.+..||-|+||.|=+++.+... .+|+|+++... ......+.+..|-++|...+.|.||++|-.|.+..+.|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45667788999999999999876433 48888886542 23345567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
|-|-||.+...++..+. ++....+.++.-+++|++||| +++||+|||||+|.+++.+|-+|+.|||+|+.+.
T Consensus 500 EaClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~-- 571 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG-- 571 (732)
T ss_pred HhhcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhc--
Confidence 99999999999988765 889999999999999999999 8899999999999999999999999999999876
Q ss_pred CCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 960 YSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 960 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
.....-+++||+.|.|||++..+..+.++|.||+|+++||+++|.+||.+..+-..+...++..-.-.+
T Consensus 572 ~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~----------- 640 (732)
T KOG0614|consen 572 SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEF----------- 640 (732)
T ss_pred cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhc-----------
Confidence 455567889999999999999999999999999999999999999999976533332222222111111
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHHHHhhhcc
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPT-----MREVIAMMIDARQSV 1084 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~~~~~~~ 1084 (1109)
+....+...+++.+....+|.+|.- ..||.+|-|..-...
T Consensus 641 -----Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 641 -----PRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred -----ccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 1122234568888888999999976 889999988764443
No 396
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=5e-29 Score=298.77 Aligned_cols=267 Identities=19% Similarity=0.195 Sum_probs=172.8
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-C----CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEE------
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-N----GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGF------ 868 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------ 868 (1109)
..++|+..++||+|+||+||+|++. + +..||||++..... .+....| .++...+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 3468999999999999999999975 4 68999998763221 1111111 1111122222221111
Q ss_pred EEeCCceEEEEEeccCCCHHHHhccCCCC-----------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 001274 869 CYHQDSNLLLYEYMENGSLGEQLHGNKQT-----------------CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRD 931 (1109)
Q Consensus 869 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 931 (1109)
+......++||||+++++|.+++...... .......+..++.||+.||+||| +.+|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCc
Confidence 24556789999999999999998754311 00123345679999999999999 77999999
Q ss_pred CCCCceeeCC-CCceEEeeccccccccCCCCCCccccccccceeccccccCC----------------------CCCccc
Q 001274 932 IKSNNILLDE-EFQAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTM----------------------KVTEKC 988 (1109)
Q Consensus 932 lkp~NIll~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~ 988 (1109)
|||+|||++. ++.+||+|||+|+..............+++.|+|||.+... .++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999986 57999999999986643333334556789999999965322 234567
Q ss_pred hhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchh---hhh----hcchhhcccHHHHHHHHHHHHhccC
Q 001274 989 DIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSEL---FDK----RLDLSAKRTVEEMTLFLKIALFCSS 1061 (1109)
Q Consensus 989 DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~li~~cl~ 1061 (1109)
||||+||++|||+++..|+.. ....+.+...........+ ... ......+..........+++.+|++
T Consensus 361 DVwSlGviL~el~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDS-----NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCch-----HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 999999999999998776542 1111111110000000000 000 0000000001112235689999999
Q ss_pred CCCCCCCCHHHHHHHHHHh
Q 001274 1062 TSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1062 ~dP~~RPt~~evl~~L~~~ 1080 (1109)
.||++|||++|+++|-+..
T Consensus 436 ~dP~kR~ta~e~L~Hpff~ 454 (566)
T PLN03225 436 FKGRQRISAKAALAHPYFD 454 (566)
T ss_pred CCcccCCCHHHHhCCcCcC
Confidence 9999999999999986543
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4e-31 Score=263.52 Aligned_cols=264 Identities=24% Similarity=0.292 Sum_probs=199.3
Q ss_pred CCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC-----ceEEE
Q 001274 805 SEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD-----SNLLL 878 (1109)
Q Consensus 805 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 878 (1109)
+-.+.||.|+||.||.+.+. +|+.||.|++......-...+.+.+|++++..++|.|+...++.-+... +.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34468999999999999875 7999999999765555556688999999999999999999988766543 45788
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
+|.|. .+|.+.+-.-.. ++.+.+..+..||++|+.||| +.+|.||||||.|.+++.+..+||+|||+|+..+.
T Consensus 136 TELmQ-SDLHKIIVSPQ~---Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIVSPQA---LTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHH-hhhhheeccCCC---CCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 99884 577777754333 888999999999999999999 88999999999999999999999999999998876
Q ss_pred CCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
+....++..+-|..|+|||.+++. .|+.+.||||.||++.|++.++..|+...+.+.+. .+.... + .|..+.+...
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~-lItdLL-G-TPs~EaMr~A 285 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQ-MIIDLL-G-TPSQEAMKYA 285 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHH-HHHHHh-C-CCcHHHHHHH
Confidence 666677777889999999999875 58999999999999999999999988654221111 111000 0 0111111100
Q ss_pred c------------chh-------hcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1038 L------------DLS-------AKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1038 ~------------~~~-------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
. ... .......-.+...+..+++..||.+|.+.++.+.++.
T Consensus 286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 0 000 0001111223456777899999999999999987764
No 398
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.5e-28 Score=266.61 Aligned_cols=240 Identities=31% Similarity=0.410 Sum_probs=193.6
Q ss_pred CcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCHHHHhc
Q 001274 814 ACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSLGEQLH 892 (1109)
Q Consensus 814 ~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 892 (1109)
+||.||+|... +++.||+|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999976 489999999975433211 5789999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCccccccccc
Q 001274 893 GNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAIAGSYG 972 (1109)
Q Consensus 893 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~ 972 (1109)
.... +++..+..++.++++++.||| +.+++|+||+|+||+++.++.++++|||.+....... ......++..
T Consensus 80 ~~~~---~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~ 151 (244)
T smart00220 80 KRGR---LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPE 151 (244)
T ss_pred hccC---CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcC
Confidence 6543 789999999999999999999 7799999999999999999999999999998765321 3344567889
Q ss_pred eeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHH
Q 001274 973 YIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLF 1052 (1109)
Q Consensus 973 y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
|+|||...+..++.++||||+|+++|++++|..||..........+... ......... .......+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~-----------~~~~~~~~ 217 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG---KPKPPFPPP-----------EWKISPEA 217 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh---ccCCCCccc-----------cccCCHHH
Confidence 9999999988899999999999999999999999875322222222221 111110000 00022467
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1053 LKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1053 ~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
.+++.+|+..+|++||++.+++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhhC
Confidence 899999999999999999999874
No 399
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.5e-28 Score=286.33 Aligned_cols=263 Identities=20% Similarity=0.277 Sum_probs=182.4
Q ss_pred hcCCCCCceEecCCcceEEEEEe-----------------cCCcEEEEEEeeccCCCc------------chhHHHHHHH
Q 001274 801 TGNFSEGAVIGRGACGTVYKATL-----------------ANGEVIAVKKIKLRGEGA------------TADNSFLAEI 851 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~~~~~------------~~~~~~~~E~ 851 (1109)
.++|++.++||+|+||+||+|.+ .+++.||||++....... ...+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 57899999999999999999963 235689999986432211 0112344577
Q ss_pred HHhccCCCCce-----eeEEEEEEe--------CCceEEEEEeccCCCHHHHhccCCC---------------------C
Q 001274 852 STLGKIRHRNI-----VKLYGFCYH--------QDSNLLLYEYMENGSLGEQLHGNKQ---------------------T 897 (1109)
Q Consensus 852 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~ 897 (1109)
.++.+++|.++ ++++++|.. .+..++||||+++++|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 677777753 3567999999999999999875321 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCccccccccceeccc
Q 001274 898 CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPE 977 (1109)
Q Consensus 898 ~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE 977 (1109)
..+++..+..++.|++.|+.|+| +.+|+||||||+||+++.++.+||+|||+++..............+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 12467788899999999999999 779999999999999999999999999999765422222222234578999999
Q ss_pred cccCCC--------------------C--CccchhHHHHHHHHHHHhCCC-CCCCccc--------CCcHHHHHHHhhhc
Q 001274 978 YAYTMK--------------------V--TEKCDIYSFGVVLLELITGKS-PVQSLEL--------GGDLVTWVRRSIHE 1026 (1109)
Q Consensus 978 ~~~~~~--------------------~--~~~~DvwSlGvll~elltg~~-pf~~~~~--------~~~~~~~~~~~~~~ 1026 (1109)
.+.... | ..+.||||+||++|||++|.. ||..... ..+...|.. ....
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~-~~~~ 459 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM-YKGQ 459 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh-hccc
Confidence 875432 1 134799999999999999875 6653210 011111111 0000
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCC---CCCCCHHHHHHHHHH
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSP---LNRPTMREVIAMMID 1079 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP---~~RPt~~evl~~L~~ 1079 (1109)
.. .. ...........+++.+++..+| .+|+|++|+++|-+.
T Consensus 460 ~~----------~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f 503 (507)
T PLN03224 460 KY----------DF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF 503 (507)
T ss_pred CC----------Cc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence 00 00 0111223456788999998765 789999999988654
No 400
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=6.6e-29 Score=239.00 Aligned_cols=218 Identities=25% Similarity=0.388 Sum_probs=174.0
Q ss_pred cCCCCCceEecCCcceEEEEEe-cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATL-ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
+.......||+|+||.|-+.++ .+|+..|+|.+..+-. ....+..+.|+.+..+. ..|.+|.++|....+...++.|
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 4555667899999999998885 4799999999976543 34566788888886554 7999999999999999999999
Q ss_pred EeccCCCHHHHhccC-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccC
Q 001274 880 EYMENGSLGEQLHGN-KQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDL 958 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 958 (1109)
|.|. .||+.+-++. +....+++.-.-+|+..+.+||.|||++ ..+||||+||+|||++.+|++|+||||.+-.+.+
T Consensus 125 E~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 125 ELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred HHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 9995 5887775432 2223488999999999999999999974 5899999999999999999999999999977652
Q ss_pred CCCCCccccccccceeccccccC----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccC
Q 001274 959 PYSKSMSAIAGSYGYIAPEYAYT----MKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMV 1028 (1109)
Q Consensus 959 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 1028 (1109)
+ -..+.-.|...|||||.+.. ..|+.|+||||+|+.+.||.+++.||+.. ....+.++..+.+..
T Consensus 202 S--iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w---~tpF~qLkqvVeep~ 270 (282)
T KOG0984|consen 202 S--IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW---GTPFQQLKQVVEEPS 270 (282)
T ss_pred h--hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc---CCHHHHHHHHhcCCC
Confidence 2 22222357778999998753 36899999999999999999999999864 344455555555544
No 401
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3e-29 Score=256.59 Aligned_cols=257 Identities=21% Similarity=0.278 Sum_probs=198.5
Q ss_pred HhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcch-hHHHHHHHHHhccC-CCCceeeEEEEEEeCCceE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATA-DNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNL 876 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 876 (1109)
..++|...++||.|+|++|-.++++ +.+.||+|+++..-.+.++ ..=...|-.+..+. +||.+|.+..+|+.+...+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 3468999999999999999999965 6788999999865333222 23345566666555 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+|.||++||+|--++++... ++++.++.....|.-|+.||| ++|||+||+|.+||++|..|++|++|+|+++.-
T Consensus 328 fvieyv~ggdlmfhmqrqrk---lpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEecCcceeeehhhhhc---CcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcC
Confidence 99999999999877766554 999999999999999999999 889999999999999999999999999999864
Q ss_pred cCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcc---cCCcHHHHHHHhhhccCCCchh
Q 001274 957 DLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLE---LGGDLVTWVRRSIHEMVPTSEL 1033 (1109)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~ 1033 (1109)
-. ......+++||+.|.|||++.+..|+..+|.|++||+++||+.|+.||+-.. .+....+.+-..+.+
T Consensus 402 l~-~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile------- 473 (593)
T KOG0695|consen 402 LG-PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE------- 473 (593)
T ss_pred CC-CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh-------
Confidence 42 2344567899999999999999999999999999999999999999998544 222222222221111
Q ss_pred hhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCC------CHHHHHHH
Q 001274 1034 FDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRP------TMREVIAM 1076 (1109)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP------t~~evl~~ 1076 (1109)
+.+..+.... -+...++..-+..||.+|. -++++..+
T Consensus 474 --kqiriprsls----vkas~vlkgflnkdp~erlgc~~~~g~~dik~h 516 (593)
T KOG0695|consen 474 --KQIRIPRSLS----VKASHVLKGFLNKDPKERLGCRPQTGFSDIKSH 516 (593)
T ss_pred --hcccccceee----hhhHHHHHHhhcCCcHHhcCCCcccchhhhhcc
Confidence 1111111111 1244677778899999884 35566544
No 402
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-29 Score=288.73 Aligned_cols=244 Identities=24% Similarity=0.308 Sum_probs=186.8
Q ss_pred CCceEecCCcce-EEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEEEecc
Q 001274 806 EGAVIGRGACGT-VYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 806 ~~~~lG~G~fg~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
-.+.+|+|+-|+ ||+|..+ |+.||||.+-. +...-..+|+..++.- +|||||++++.-.++...||+.|.|.
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYE-GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred cHHHcccCCCCcEEEEEeeC-CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 346789999986 6999986 88999998852 2344567899999888 69999999999899999999999995
Q ss_pred CCCHHHHhccCCCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC---C--CceEEeecccccccc
Q 001274 884 NGSLGEQLHGNKQT-CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE---E--FQAHVGDFGLAKLID 957 (1109)
Q Consensus 884 ~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~~kl~DFG~a~~~~ 957 (1109)
.+|.+++...... ........+.+..|++.|++||| +.+||||||||.||||+. + .+++|+|||+++...
T Consensus 587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 6999999874211 11121455788999999999999 779999999999999965 2 579999999999876
Q ss_pred CCCC--CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 958 LPYS--KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 958 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
.... ....+..||-+|+|||++....-+.++||||+||++|+.++ |.+||.+.-. + -.....+......+.
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~-----R-~~NIl~~~~~L~~L~ 736 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE-----R-QANILTGNYTLVHLE 736 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH-----h-hhhhhcCccceeeec
Confidence 3322 22356789999999999999888899999999999999999 5999975321 1 011111111111110
Q ss_pred hhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1035 DKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
...++ +..++|.+|++.+|..||+|.+|+.|
T Consensus 737 ---------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 737 ---------PLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ---------cCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 01111 56799999999999999999999854
No 403
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.4e-28 Score=270.72 Aligned_cols=209 Identities=25% Similarity=0.340 Sum_probs=175.4
Q ss_pred HhcCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 877 (1109)
...-|..++.||-|+||+|.+++ .++...||+|.+...+.- ......+.+|-.|+...+.+.||+++-.|++.+..|+
T Consensus 627 dKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYF 706 (1034)
T KOG0608|consen 627 DKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF 706 (1034)
T ss_pred cccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEE
Confidence 34568888999999999999997 445678999988644321 2234557789999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
||+|++||++-.+|.+.+- |.+..++..+..+.-|+++.| +.|+|||||||+|||||.||++||+|||++.-+.
T Consensus 707 VMdYIPGGDmMSLLIrmgI---FeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRMGI---FEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred EEeccCCccHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccce
Confidence 9999999999999987664 889999999999999999999 8999999999999999999999999999985331
Q ss_pred ---------CCCCCC--------------------------------ccccccccceeccccccCCCCCccchhHHHHHH
Q 001274 958 ---------LPYSKS--------------------------------MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVV 996 (1109)
Q Consensus 958 ---------~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvl 996 (1109)
...... ....+||+.|+|||++....|+..+|.||.|||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 000000 012359999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCcccCC
Q 001274 997 LLELITGKSPVQSLELGG 1014 (1109)
Q Consensus 997 l~elltg~~pf~~~~~~~ 1014 (1109)
+|||+.|+.||.+....+
T Consensus 861 l~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHHHhhCCCCccCCCCCc
Confidence 999999999998765443
No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=253.02 Aligned_cols=262 Identities=23% Similarity=0.288 Sum_probs=203.1
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCC------c
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQD------S 874 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 874 (1109)
.+|...+.+|.|+- .|-.|.+. .+++||+|++..........+...+|...+..+.|+||++++.++.-.. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 47777888999988 66666644 6899999999776666667788899999999999999999999997654 4
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAK 954 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 954 (1109)
.|+|||+| .++|...+... ++-+.+..|..|++.|+.||| +.+|+||||||+||++..+..+||.|||+|+
T Consensus 96 ~y~v~e~m-~~nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILME-----LDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhh-hhHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhc
Confidence 68999999 46898888732 667788999999999999999 8899999999999999999999999999999
Q ss_pred cccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhh
Q 001274 955 LIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELF 1034 (1109)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1109)
..+. ...++.++.|..|+|||++.+..|.+.+||||.||++.||++|+.-|.+. +.+.+|.+..-.-..|....+
T Consensus 167 ~e~~--~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~---d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 167 TEDT--DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK---DHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred ccCc--ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc---hHHHHHHHHHHHhcCCCHHHH
Confidence 7652 24667889999999999999999999999999999999999999988742 222223221111111111111
Q ss_pred hhhcc---------------------------hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 001274 1035 DKRLD---------------------------LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMI 1078 (1109)
Q Consensus 1035 ~~~~~---------------------------~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~ 1078 (1109)
++-.. ...+...-......+++.+|+-.+|++|-+++++++|--
T Consensus 242 ~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY 312 (369)
T KOG0665|consen 242 KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPY 312 (369)
T ss_pred HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCe
Confidence 10000 001111122334778999999999999999999998853
No 405
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=1.8e-28 Score=239.11 Aligned_cols=264 Identities=22% Similarity=0.265 Sum_probs=197.2
Q ss_pred hcCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCc--eE
Q 001274 801 TGNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDS--NL 876 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~--~~ 876 (1109)
.++|++.+++|.|.|++||.|. ..+.+.++||+++ +...+.+.+|+.+++.++ ||||++++++..++.. ..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK-----PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK-----PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeec-----hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 4688999999999999999998 5578999999998 345678999999999996 9999999999987654 57
Q ss_pred EEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-CceEEeecccccc
Q 001274 877 LLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE-FQAHVGDFGLAKL 955 (1109)
Q Consensus 877 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~ 955 (1109)
+|+||+.+.+....... ++..+++..+.+++.||+|+| ++||+|||+||.|+|+|.. ..++++|+|+|.+
T Consensus 112 LiFE~v~n~Dfk~ly~t------l~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYPT------LTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hHhhhhccccHHHHhhh------hchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhh
Confidence 99999999887666543 677788899999999999999 8899999999999999854 5799999999987
Q ss_pred ccCCCCCCccccccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCC-cHHHHHHHh--------h-
Q 001274 956 IDLPYSKSMSAIAGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGG-DLVTWVRRS--------I- 1024 (1109)
Q Consensus 956 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~-~~~~~~~~~--------~- 1024 (1109)
+... ......+.+..|--||.+-.- .|+..-|+|||||++..|+..+.||-...... .++..++-. +
T Consensus 183 YHp~--~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 183 YHPG--KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred cCCC--ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 6522 222334567778999987654 58999999999999999999999986543222 222221100 0
Q ss_pred hccCCCchhhhhhcchhhc----------ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 001274 1025 HEMVPTSELFDKRLDLSAK----------RTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDA 1080 (1109)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~ 1080 (1109)
.-....++-++..+....+ ...-...+..+++.+.+..|-.+||||+|.+.|-...
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~ 326 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFA 326 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence 0001111112211111100 0001124578999999999999999999999886543
No 406
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=6.7e-29 Score=268.19 Aligned_cols=268 Identities=22% Similarity=0.255 Sum_probs=211.2
Q ss_pred HHHhcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC------CCceeeEEEEEE
Q 001274 798 LEATGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR------HRNIVKLYGFCY 870 (1109)
Q Consensus 798 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~ 870 (1109)
+.-..+|.+....|+|-||+|..|++. .|+.||||++.. +..-.+.=++|+++++++. --|+++++-.|.
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn---NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN---NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeec---chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 344579999999999999999999865 588999999972 2333455678999999994 347899999999
Q ss_pred eCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-CceEEee
Q 001274 871 HQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE-FQAHVGD 949 (1109)
Q Consensus 871 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~D 949 (1109)
...+.|+|+|... -+|.+.+++.+....+....+..+++|+.-||.+|. ..+|+|.||||+||||++. ..+||||
T Consensus 505 hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCD 580 (752)
T KOG0670|consen 505 HKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCD 580 (752)
T ss_pred hcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeecc
Confidence 9999999999884 599999999888777999999999999999999999 6799999999999999865 4689999
Q ss_pred ccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCC
Q 001274 950 FGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVP 1029 (1109)
Q Consensus 950 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 1029 (1109)
||.|.... ....+.+..+..|+|||++.|.+|+...|+||.||++||+.||+..|.+....+++.-++.- .+.+|
T Consensus 581 fGSA~~~~---eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~--KGk~p 655 (752)
T KOG0670|consen 581 FGSASFAS---ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMEL--KGKFP 655 (752)
T ss_pred Cccccccc---cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHh--cCCCc
Confidence 99998765 23345566677899999999999999999999999999999999999876654444333221 11111
Q ss_pred C---------chhhhhhcch-----------------------------------hhcccHHHHHHHHHHHHhccCCCCC
Q 001274 1030 T---------SELFDKRLDL-----------------------------------SAKRTVEEMTLFLKIALFCSSTSPL 1065 (1109)
Q Consensus 1030 ~---------~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~li~~cl~~dP~ 1065 (1109)
- ..-||+.+.. ..+.......+|..++.+|+..||+
T Consensus 656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~ 735 (752)
T KOG0670|consen 656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE 735 (752)
T ss_pred HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence 0 0111111100 0122334456789999999999999
Q ss_pred CCCCHHHHHHHH
Q 001274 1066 NRPTMREVIAMM 1077 (1109)
Q Consensus 1066 ~RPt~~evl~~L 1077 (1109)
+|.|..+++.|-
T Consensus 736 KRit~nqAL~Hp 747 (752)
T KOG0670|consen 736 KRITVNQALKHP 747 (752)
T ss_pred hcCCHHHHhcCC
Confidence 999999998774
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.3e-27 Score=239.22 Aligned_cols=250 Identities=19% Similarity=0.321 Sum_probs=190.2
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEE-EEeCCceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGF-CYHQDSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv 878 (1109)
+.|.+.+.+|+|.||.+-+++++ ..+.+++|.+.. .....++|.+|...--.+ .|.||+.-+++ |+..+..+++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~---p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR---PQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc---chhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 57888999999999999999976 578899998873 334578899999887677 58899877764 5667778899
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceee--CCCCceEEeeccccccc
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILL--DEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DFG~a~~~ 956 (1109)
+||++.|+|.+-+...+ +-+....+++.|++.|+.||| ++++||||||.+|||| .+..++|++|||..+..
T Consensus 101 qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999999999887644 778888999999999999999 8899999999999999 34458999999999865
Q ss_pred cCCCCCCccccccccceeccccccCC-----CCCccchhHHHHHHHHHHHhCCCCCCCcc-cCCcHHHHHHHhhhccCCC
Q 001274 957 DLPYSKSMSAIAGSYGYIAPEYAYTM-----KVTEKCDIYSFGVVLLELITGKSPVQSLE-LGGDLVTWVRRSIHEMVPT 1030 (1109)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGvll~elltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~ 1030 (1109)
+.. .....-+..|.+||..... ...+.+|||.||+++|.++||+.||+... .+..+.+|.+-..+.....
T Consensus 174 g~t----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~ 249 (378)
T KOG1345|consen 174 GTT----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPAL 249 (378)
T ss_pred Cce----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccC
Confidence 411 1222345569999976543 24678999999999999999999999654 4455666666544433333
Q ss_pred chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1031 SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
...+.+ -.+...++..+-+..+|++|--..++.++
T Consensus 250 P~~F~~-----------fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 250 PKKFNP-----------FSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred chhhcc-----------cCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 222221 11245677888899999999444444433
No 408
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=9.6e-28 Score=262.79 Aligned_cols=200 Identities=26% Similarity=0.323 Sum_probs=171.8
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC------cchhHHHHHHHHHhccCC---CCceeeEEEEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG------ATADNSFLAEISTLGKIR---HRNIVKLYGFCY 870 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 870 (1109)
..+|...+.+|+|+||.||.|.++ +...|+||.+.+...- ......+-.|++||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 457889999999999999999976 4567888888644211 111223557999999996 999999999999
Q ss_pred eCCceEEEEEec-cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEee
Q 001274 871 HQDSNLLLYEYM-ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGD 949 (1109)
Q Consensus 871 ~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 949 (1109)
+++..|++||.- ++-+|.+++..+.. +++.++..|++||+.|+++|| +.+|||||||-+||.++.+|-+|++|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCc---cchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEee
Confidence 999999999964 45689999987665 899999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCCCCCccccccccceeccccccCCCC-CccchhHHHHHHHHHHHhCCCCCCC
Q 001274 950 FGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKV-TEKCDIYSFGVVLLELITGKSPVQS 1009 (1109)
Q Consensus 950 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvll~elltg~~pf~~ 1009 (1109)
||.|.... ......++||.+|.|||++.+.+| +..-|||++|+++|-++....||..
T Consensus 714 fgsaa~~k---sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 714 FGSAAYTK---SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ccchhhhc---CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99998754 455677899999999999999887 5678999999999999999999863
No 409
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.3e-25 Score=237.69 Aligned_cols=211 Identities=39% Similarity=0.579 Sum_probs=182.6
Q ss_pred EecCCcceEEEEEecC-CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCHH
Q 001274 810 IGRGACGTVYKATLAN-GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSLG 888 (1109)
Q Consensus 810 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 888 (1109)
||+|++|.||+++..+ ++.+++|++....... ..+.+.+|++.++.++|++++++++++......++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999999764 8999999997443221 3467999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-CCceEEeeccccccccCCCCCCcccc
Q 001274 889 EQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE-EFQAHVGDFGLAKLIDLPYSKSMSAI 967 (1109)
Q Consensus 889 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~~~~~~~~~~ 967 (1109)
+++..... .+++..+..++.++++++.+|| +.+++|+||+|.||+++. ++.++|+|||.+........ .....
T Consensus 80 ~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~ 153 (215)
T cd00180 80 DLLKENEG--KLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTI 153 (215)
T ss_pred HHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcc
Confidence 99976532 3889999999999999999999 779999999999999999 89999999999986653211 23335
Q ss_pred ccccceeccccccCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccH
Q 001274 968 AGSYGYIAPEYAYTM-KVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTV 1046 (1109)
Q Consensus 968 ~gt~~y~aPE~~~~~-~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
.+...|++||..... .++.++|+|++|+++++|
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 577889999998887 788999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1047 EEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1047 ~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
..+.+++.+|++.+|++||++++++++
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 356789999999999999999999875
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=3.6e-27 Score=262.74 Aligned_cols=253 Identities=28% Similarity=0.372 Sum_probs=202.9
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
++|.....+|.|.||.||+|++. .++..|||+++..... ......+|+-+++..+|+|||.++|.+...+..+++||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 57888889999999999999965 6899999999865433 45567789999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
||.+|+|.+.-+..+. +++.+...+++..++|++||| +++=+|||||-.||++++.|.+|++|||.+..+...
T Consensus 93 ycgggslQdiy~~Tgp---lselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat- 165 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT- 165 (829)
T ss_pred ecCCCcccceeeeccc---chhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhh-
Confidence 9999999998887665 899999999999999999999 778899999999999999999999999998766522
Q ss_pred CCCccccccccceecccccc---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhh
Q 001274 961 SKSMSAIAGSYGYIAPEYAY---TMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKR 1037 (1109)
Q Consensus 961 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1109)
-.+...+.||+.|||||+.. .+.|..++|||+.|+...|+-.-+.|-.+... .+...-...........-
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp----mr~l~LmTkS~~qpp~lk--- 238 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP----MRALFLMTKSGFQPPTLK--- 238 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch----HHHHHHhhccCCCCCccc---
Confidence 23345678999999999753 56699999999999999999887777433221 111111111111111111
Q ss_pred cchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1038 LDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
......+.|-+|++.|+..+|.+||++..++.+
T Consensus 239 ------Dk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 239 ------DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ------CCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 133444578899999999999999999887643
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=3.9e-25 Score=236.95 Aligned_cols=200 Identities=36% Similarity=0.526 Sum_probs=172.6
Q ss_pred CCCCceEecCCcceEEEEEecC-CcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 804 FSEGAVIGRGACGTVYKATLAN-GEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
|...+.||+|++|+||+|...+ ++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 5667899999999999999764 899999999744322 24678889999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
++++|.+++...... +++..+..++.+++.++.+|| +.+++|+|++|+||+++.++.++|+|||.+.........
T Consensus 80 ~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 80 EGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 999999999765432 788999999999999999999 779999999999999999999999999999876533211
Q ss_pred Cccccccccceeccccc-cCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 001274 963 SMSAIAGSYGYIAPEYA-YTMKVTEKCDIYSFGVVLLELITGKSPVQS 1009 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvll~elltg~~pf~~ 1009 (1109)
......++..|++||+. ....++.++|||++|++++||++|+.||..
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 23445678889999998 677788899999999999999999999964
No 412
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=7.5e-24 Score=275.72 Aligned_cols=306 Identities=22% Similarity=0.262 Sum_probs=167.4
Q ss_pred cceEEeecccccCccCcccCCCCcCcEEEccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEccc
Q 001274 290 LKKLYVYTNELNGTIPHELGNCTSAVEIDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSI 369 (1109)
Q Consensus 290 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 369 (1109)
|+.|++.++.+. .+|..+ ...+|++|+|++|++. .++..+..+++|+.|+|+++.....+|. ++.+++|++|+|++
T Consensus 591 Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSD 666 (1153)
T ss_pred cEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecC
Confidence 444444444443 333333 2344444444444444 2333344444444444444433333332 44445555555554
Q ss_pred CcccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCCccccCCCC
Q 001274 370 NNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNIP 449 (1109)
Q Consensus 370 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 449 (1109)
|.....+|..+.++++|+.|++++|..-+.+|..+ .+++|++|++++|.....+|.. ..+|++|+|++|.+. .+|
T Consensus 667 c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP 741 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFP 741 (1153)
T ss_pred CCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-ccc
Confidence 44333445555555555555555543333444433 3455555555555433333321 234555555555554 233
Q ss_pred CCCccccccceeecccccc-------cccCCccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCCh
Q 001274 450 PGLKTCRSLMQLMLGQNQL-------TGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPS 522 (1109)
Q Consensus 450 ~~~~~l~~L~~L~L~~N~l-------~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 522 (1109)
..+ .+++|.+|.+.++.. ....+..+...++|+.|+|++|...+.+|..++++++|+.|++++|...+.+|.
T Consensus 742 ~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~ 820 (1153)
T PLN03210 742 SNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPT 820 (1153)
T ss_pred ccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCC
Confidence 322 345555555544221 112222233446777777777776666777777777788888877654445665
Q ss_pred hhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecccc-cccccccCcccCCCcc
Q 001274 523 EVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSD-NKLTGAIPSSLGGLAR 601 (1109)
Q Consensus 523 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~ 601 (1109)
.+ ++++|+.|+|++|.....+|.. .++|+.|+|++|.++ .+|..+..+++|+.|+|++ |++. .+|..+..+++
T Consensus 821 ~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~ 894 (1153)
T PLN03210 821 GI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKH 894 (1153)
T ss_pred CC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccC
Confidence 55 6777888888776554455543 356777888888877 5777778888888888877 4454 46666777778
Q ss_pred cceeeccCcc
Q 001274 602 LTELQMGGNI 611 (1109)
Q Consensus 602 L~~L~l~~N~ 611 (1109)
|+.++++++.
T Consensus 895 L~~L~l~~C~ 904 (1153)
T PLN03210 895 LETVDFSDCG 904 (1153)
T ss_pred CCeeecCCCc
Confidence 8888887774
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-26 Score=241.66 Aligned_cols=399 Identities=22% Similarity=0.221 Sum_probs=229.3
Q ss_pred eEEEcccccccccccccccCcCCCceEEeecCCCCCCCCcccccccccceecccc-ccccCCCCccccccccchhhhccc
Q 001274 147 RKLYLCENYIFGEIPEEIGNLTSLEELVIYSNNLTGAIPASISKLRQLRVIRAGH-NSLSGPIPPEISECEGLEVLGLAQ 225 (1109)
Q Consensus 147 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~l~~l~~L~~L~L~~ 225 (1109)
..++|..|+|+...|.+|+.+.+|+.|||++|+|+..-|++|..|..|..|.+.+ |+|+......|++|..|+.|.+.-
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 3444444555444445556666666666666666655566666666555555444 566644445566666777777777
Q ss_pred ccccccCchhhhccccccceecccccccCCCCC-Cccccccccceeeeeccce------------ecCchhhhccCccce
Q 001274 226 NSLEGFLPSELEKLRNLTDLILWQNHLSGEIPP-TIGNIQSLELLALHENSFS------------GGLPKELGKLSRLKK 292 (1109)
Q Consensus 226 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~------------~~~p~~l~~l~~L~~ 292 (1109)
|++.-.....|..|++|..|.|.+|.+. .++. +|..+.+++.+.+..|.+- ...|..++...-..-
T Consensus 150 n~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p 228 (498)
T KOG4237|consen 150 NHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSP 228 (498)
T ss_pred hhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecch
Confidence 7766666666777777777777777776 4443 6677777777777766621 223334444444444
Q ss_pred EEeecccccCccCcccCC-CCcCcEEEccCCcccCCCc-ccccCCCCcceEecccccccCcccccccCCCCccEEEcccC
Q 001274 293 LYVYTNELNGTIPHELGN-CTSAVEIDLSENQLTGFIP-RELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSIN 370 (1109)
Q Consensus 293 L~l~~n~l~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 370 (1109)
..+.++++..+-+..|.. +.++..=-.+.+...+..| ..|..+++|+.|+|++|+++++.+.+|..+..+++|.|..|
T Consensus 229 ~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N 308 (498)
T KOG4237|consen 229 YRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRN 308 (498)
T ss_pred HHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcc
Confidence 455555554333332221 1122221222332333333 35667777777777777777777777777777777777777
Q ss_pred cccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCcc-chhhhcccccceeecCCccccCCCC
Q 001274 371 NLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSI-PPHLCMYQKLIFLSLGSNRLSGNIP 449 (1109)
Q Consensus 371 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~ 449 (1109)
+|...-...|.++..|+.|+|++|+|+-..|..|..+..|..|+|-.|.+.--- -.|+.. .|..+.-.|..|
T Consensus 309 ~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~-------Wlr~~~~~~~~~ 381 (498)
T KOG4237|consen 309 KLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE-------WLRKKSVVGNPR 381 (498)
T ss_pred hHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH-------HHhhCCCCCCCC
Confidence 776555566777777777777777777777777777777777777666553110 001110 111222111111
Q ss_pred CCCccccccceeecccccccc---cCCcccc---------CCcccceec-cccccccCCCCccccccccccEEEccCCcc
Q 001274 450 PGLKTCRSLMQLMLGQNQLTG---SLPIEFY---------NLQNLSALE-LYQNRFSGLIPPEIGKLRNLERLHLSENYF 516 (1109)
Q Consensus 450 ~~~~~l~~L~~L~L~~N~l~~---~~p~~~~---------~l~~L~~L~-L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 516 (1109)
-..-..++.+.++.+.+.. ..|++.. .++-+.+.. -|++.++ .+|..+. ..-++|++.+|.+
T Consensus 382 --Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~ 456 (498)
T KOG4237|consen 382 --CQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAI 456 (498)
T ss_pred --CCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchh
Confidence 1111234444454443321 1222211 123333333 3333343 4555443 2467889999999
Q ss_pred CCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCC
Q 001274 517 VGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRN 562 (1109)
Q Consensus 517 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 562 (1109)
+ .+|.. .+.+| .+|+|+|+|+..--..|.++++|.+|-||+|
T Consensus 457 ~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 457 T-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred c-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 8 56766 67778 8899999998766778899999999999887
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-26 Score=244.44 Aligned_cols=426 Identities=22% Similarity=0.255 Sum_probs=234.0
Q ss_pred ccccccccCchhhhccccccceecccccccCCCCCCccccccccceeeeeccceecCchhhhccCccceEEeec-ccccC
Q 001274 224 AQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPKELGKLSRLKKLYVYT-NELNG 302 (1109)
Q Consensus 224 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~-n~l~~ 302 (1109)
++-.++ .+|..+. ..-+.++|..|+|+...|.+|+.+.+|+.|||++|+|+.+-|++|.+|.+|..|.+.+ |+|+.
T Consensus 54 r~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~ 130 (498)
T KOG4237|consen 54 RGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD 130 (498)
T ss_pred cCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh
Confidence 333344 4554443 3566788888888866677888888888888888888888888888888888877766 88886
Q ss_pred ccCcccCCCCcCcEEEccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCccc---------
Q 001274 303 TIPHELGNCTSAVEIDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLT--------- 373 (1109)
Q Consensus 303 ~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~--------- 373 (1109)
.....|.++.+|+-|.+.-|++.-...+.|..+++|..|.+.+|.+..+-...|..+..++.+.+..|.+-
T Consensus 131 l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla 210 (498)
T KOG4237|consen 131 LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLA 210 (498)
T ss_pred hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhh
Confidence 55567888888888888888888777778888888888888888887555557777888888888777732
Q ss_pred ---CCCCcchhcccccceEEcccccccccCCCccccc-CcCcEEEeccccccCccc-hhhhcccccceeecCCccccCCC
Q 001274 374 ---GTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVN-SHLSVLDVSMNNLDGSIP-PHLCMYQKLIFLSLGSNRLSGNI 448 (1109)
Q Consensus 374 ---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~ 448 (1109)
...|..++...-..-..+.++++....+..|... ..+..=-.+.+...++.| ..|.++++|+.|+|++|+|+++.
T Consensus 211 ~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~ 290 (498)
T KOG4237|consen 211 DDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIE 290 (498)
T ss_pred hHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhh
Confidence 1223334444434444444444443333333221 111111111222222222 23555555555555555555555
Q ss_pred CCCCccccccceeecccccccccCCccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCC-CChhhccc
Q 001274 449 PPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGY-IPSEVGNL 527 (1109)
Q Consensus 449 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l 527 (1109)
+.+|.++..+++|+|..|+|..+....|.++..|++|+|++|+|+...|..|..+..|.+|.|-.|.+.-- --.+++.
T Consensus 291 ~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~- 369 (498)
T KOG4237|consen 291 DGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE- 369 (498)
T ss_pred hhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH-
Confidence 55555555555555555555555455555555555555555555555555555555555555555544310 0011111
Q ss_pred ccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCcc---CCCcccccccccceecccccccccccCcccCCCcccce
Q 001274 528 EHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTG---SAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTE 604 (1109)
Q Consensus 528 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 604 (1109)
.|..+.-.| .|.. .+-..++.++++.+.+.. ..|++.+..+ .+..-..++-+.+
T Consensus 370 ------Wlr~~~~~~-~~~C-q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~---------------s~~cP~~c~c~~t 426 (498)
T KOG4237|consen 370 ------WLRKKSVVG-NPRC-QSPGFVRQIPISDVAFGDFRCGGPEELGCLT---------------SSPCPPPCTCLDT 426 (498)
T ss_pred ------HHhhCCCCC-CCCC-CCCchhccccchhccccccccCCccccCCCC---------------CCCCCCCcchhhh
Confidence 111222111 1211 111234455555554331 1222211110 0000111222322
Q ss_pred eeccCccccccccccccccchhhhhhccCCccccccccccccCccccceeecCCCccccCCchhhhccccceEEEccCc
Q 001274 605 LQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGVIPYELGNLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLSNN 683 (1109)
Q Consensus 605 L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls~N 683 (1109)
..=-.|+....+|..+..-.. .|++.+|.++ .+|.+ .+++| .+|||+|+++-.--..|.++..|.+|-||+|
T Consensus 427 VvRcSnk~lk~lp~~iP~d~t---elyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 427 VVRCSNKLLKLLPRGIPVDVT---ELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hHhhcccchhhcCCCCCchhH---HHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 221222222244444432222 3567777776 44554 56667 7777777777555566777777777777776
No 415
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=3.9e-25 Score=236.55 Aligned_cols=266 Identities=26% Similarity=0.350 Sum_probs=196.2
Q ss_pred HHhcCCCCCceEecCCcceEEEEEec----CCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCC
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATLA----NGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQD 873 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 873 (1109)
.....|..+++||+|.|++||+|.+. .++.||+|.+... .....+.+|++++..+ .+.||+++.+++..++
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc----cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 44567889999999999999999743 4678999999643 2456688999999999 5899999999999999
Q ss_pred ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC-CCCceEEeeccc
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD-EEFQAHVGDFGL 952 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG~ 952 (1109)
...+|+||++.....++... ++..++...+..++.||.++| ..|||||||||.|++.+ ..++-.|.|||+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechh
Confidence 99999999999999888865 667888999999999999999 88999999999999997 456889999999
Q ss_pred cccccCCC------C-------C------------------------------CccccccccceeccccccCC-CCCccc
Q 001274 953 AKLIDLPY------S-------K------------------------------SMSAIAGSYGYIAPEYAYTM-KVTEKC 988 (1109)
Q Consensus 953 a~~~~~~~------~-------~------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~ 988 (1109)
|...+... . . ......||++|+|||++..- .-+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97321000 0 0 00123599999999998754 468899
Q ss_pred hhHHHHHHHHHHHhCCCCCCCcccC-CcHHHHHH--------H--hhhcc--------CCC-chhhh--hhcc-----h-
Q 001274 989 DIYSFGVVLLELITGKSPVQSLELG-GDLVTWVR--------R--SIHEM--------VPT-SELFD--KRLD-----L- 1040 (1109)
Q Consensus 989 DvwSlGvll~elltg~~pf~~~~~~-~~~~~~~~--------~--~~~~~--------~~~-~~~~~--~~~~-----~- 1040 (1109)
||||.||++.-+++++.||.....+ +.+.+.+. + ...+. .+. .+... ..+. .
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 9999999999999999998654422 22222211 1 01111 000 00000 0000 0
Q ss_pred -----hhcc-cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1041 -----SAKR-TVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1041 -----~~~~-~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
.... .......+.+++.+|+..+|.+|-|+++.++|-
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence 0000 001123688999999999999999999999774
No 416
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=7.8e-25 Score=218.74 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=196.9
Q ss_pred CCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 803 NFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
+.....+|.+...|+.|+|+++ |..+++|++..+.......++|..|.-.++-+.||||.+++|.|.......++..||
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 3445568899999999999997 566777888877777777789999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSK 962 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 962 (1109)
+.|+|+..+++...- .++-.++.+++.+||+|++|||+- +.-|.---+....|++|++.+++|+= +-+++. .
T Consensus 270 p~gslynvlhe~t~v-vvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~kfs-----f 341 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSV-VVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTKFS-----F 341 (448)
T ss_pred cchHHHHHHhcCccE-EEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccceee-----e
Confidence 999999999986542 467789999999999999999976 44455567899999999999888742 111111 1
Q ss_pred CccccccccceeccccccCCCCC---ccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcc
Q 001274 963 SMSAIAGSYGYIAPEYAYTMKVT---EKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLD 1039 (1109)
Q Consensus 963 ~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1109)
...+..-.+.|++||.+..++-+ +++|+|||++++||+.|...||.+...-+--.....+..+..+
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~i----------- 410 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHI----------- 410 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccC-----------
Confidence 11122346789999999887754 5899999999999999999999876532221222222222222
Q ss_pred hhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1040 LSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
++...+.+.+++.-|+..||.+||.+..|+-.|++..
T Consensus 411 -----ppgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 411 -----PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -----CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 2223346778999999999999999999999988753
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=3.9e-23 Score=269.01 Aligned_cols=339 Identities=23% Similarity=0.258 Sum_probs=246.8
Q ss_pred chhhhccCccceEEeecccc------cCccCcccCCCC-cCcEEEccCCcccCCCcccccCCCCcceEecccccccCccc
Q 001274 281 PKELGKLSRLKKLYVYTNEL------NGTIPHELGNCT-SAVEIDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIP 353 (1109)
Q Consensus 281 p~~l~~l~~L~~L~l~~n~l------~~~~~~~l~~l~-~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 353 (1109)
+.+|.++++|+.|.+..+.. ...+|..+..++ +|+.|++.+|.++ .+|..+ .+.+|+.|++.+|.+. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 45677788888888866532 234566666654 6888888888887 456555 4688888999888877 466
Q ss_pred ccccCCCCccEEEcccCcccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhcccc
Q 001274 354 RELGQLTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQK 433 (1109)
Q Consensus 354 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~ 433 (1109)
..+..+++|++|+|++++..+.+| .+..+++|+.|+|++|.....+|..++.+++|+.|++++|.....+|..+ ++++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 777888889999998876544666 47788888999998887666788888888889999998875555666554 6888
Q ss_pred cceeecCCccccCCCCCCCccccccceeecccccccccCCccccCCcccceeccccccc-------cCCCCccccccccc
Q 001274 434 LIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRF-------SGLIPPEIGKLRNL 506 (1109)
Q Consensus 434 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l-------~~~~p~~~~~l~~L 506 (1109)
|+.|++++|...+.+|.. .++|++|++++|.+. .+|..+ .+++|+.|++.++.. ....+..+...++|
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL 780 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL 780 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccc
Confidence 888888888665555543 357888888888887 455544 577888888876432 21222223345688
Q ss_pred cEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceeccccc
Q 001274 507 ERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDN 586 (1109)
Q Consensus 507 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 586 (1109)
+.|+|++|...+.+|..++++++|+.|+|++|...+.+|..+ ++++|+.|+|++|..-..+|.. ..+|+.|+|++|
T Consensus 781 ~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n 856 (1153)
T PLN03210 781 TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRT 856 (1153)
T ss_pred hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCC
Confidence 889998887777788888888899999998875444777665 6888899999887654455543 357888889888
Q ss_pred ccccccCcccCCCcccceeeccCccccccccccccccchhhhhhccCCc
Q 001274 587 KLTGAIPSSLGGLARLTELQMGGNIFSGSIPVALGQLTALQIALNISHN 635 (1109)
Q Consensus 587 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N 635 (1109)
.++ .+|.++..+++|+.|+|++|+-...+|..+.+++.|. .++++++
T Consensus 857 ~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~-~L~l~~C 903 (1153)
T PLN03210 857 GIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLE-TVDFSDC 903 (1153)
T ss_pred CCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCC-eeecCCC
Confidence 887 5788888888899999888544446777777777765 2555443
No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=2.3e-23 Score=214.16 Aligned_cols=172 Identities=23% Similarity=0.233 Sum_probs=128.4
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|+|.++++..+. .+++..+..++.||+.||+||| +.+ ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~----- 62 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE----- 62 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc-----
Confidence 689999976443 3999999999999999999999 445 999999999999999 9999865421
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcc
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKR 1044 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
...||+.|+|||++.+..++.++|||||||++|||+||+.||............+........+.. +.. ..
T Consensus 63 -~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~ 133 (176)
T smart00750 63 -QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD-----RSN---LE 133 (176)
T ss_pred -cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc-----ccc---HH
Confidence 125789999999999999999999999999999999999999754322222211111111111000 000 00
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhc
Q 001274 1045 TVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQS 1083 (1109)
Q Consensus 1045 ~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 1083 (1109)
.......+.+++.+||+.+|++||++.|++++++.....
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 111113588999999999999999999999999887543
No 419
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=5e-24 Score=269.69 Aligned_cols=199 Identities=17% Similarity=0.191 Sum_probs=140.9
Q ss_pred cCCC-CceeeEEEEEE-------eCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCe
Q 001274 856 KIRH-RNIVKLYGFCY-------HQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHI 927 (1109)
Q Consensus 856 ~l~h-~niv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 927 (1109)
.++| +||++++++|. ..+..+.++||+ +++|.+++.... ..+++.++..++.||++||+||| +++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAH---SQGI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 4455 57888888772 234567788988 669999997543 23899999999999999999999 7899
Q ss_pred EecCCCCCceeeCC-------------------CCceEEeeccccccccCCCC---------------CCccccccccce
Q 001274 928 IHRDIKSNNILLDE-------------------EFQAHVGDFGLAKLIDLPYS---------------KSMSAIAGSYGY 973 (1109)
Q Consensus 928 vH~Dlkp~NIll~~-------------------~~~~kl~DFG~a~~~~~~~~---------------~~~~~~~gt~~y 973 (1109)
+||||||+|||++. ++.+|++|||+++....... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999955 44566666666653211000 001123578899
Q ss_pred eccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHH
Q 001274 974 IAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFL 1053 (1109)
Q Consensus 974 ~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1109)
+|||++.+..|+.++|||||||++|||++|..|+.... ..+........+.. .........
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~------~~~~~~~~~~~~~~-------------~~~~~~~~~ 242 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS------RTMSSLRHRVLPPQ-------------ILLNWPKEA 242 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH------HHHHHHHHhhcChh-------------hhhcCHHHH
Confidence 99999999999999999999999999999988865311 11111111111100 001112345
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1054 KIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1054 ~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.++.+||+.+|.+||+|.|++++-+.
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h~~~ 268 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQSEFI 268 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhchhh
Confidence 78889999999999999999987654
No 420
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3.5e-22 Score=225.37 Aligned_cols=262 Identities=22% Similarity=0.259 Sum_probs=198.6
Q ss_pred CCCCCceEecCCcceEEEEEecCC--cEEEEEEeeccCCCcchhHHHHHHHHHhccCCC----CceeeEEEEE-EeCCce
Q 001274 803 NFSEGAVIGRGACGTVYKATLANG--EVIAVKKIKLRGEGATADNSFLAEISTLGKIRH----RNIVKLYGFC-YHQDSN 875 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~ 875 (1109)
+|.+.++||+|+||.||.|..... ..+|+|......... ...+..|..++..+.. +++..+++.. ......
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~--~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK--PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC--CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 799999999999999999997643 578888876432221 1157778888888862 5889999988 477788
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-----CceEEeec
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE-----FQAHVGDF 950 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~DF 950 (1109)
++||+.+ |.+|.++..... ...++..++.+|+.|++.+|+++| +.|++||||||.|+++... ..+++.||
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 9999998 889999886665 335999999999999999999999 8899999999999999765 46999999
Q ss_pred cccc--cccCCCC------CC-ccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHH
Q 001274 951 GLAK--LIDLPYS------KS-MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVR 1021 (1109)
Q Consensus 951 G~a~--~~~~~~~------~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~ 1021 (1109)
|+|+ .+..... .. .....||..|+++++..+...+++.|+||++.++.|+..|..||..............
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~ 251 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEK 251 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHH
Confidence 9998 3321111 11 2345699999999999999999999999999999999999999986653333222222
Q ss_pred HhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1022 RSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
......... ........+.++...+-..+...+|....+...+.+.....
T Consensus 252 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 252 DPRKLLTDR-------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred Hhhhhcccc-------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 211111110 01111234555666566689999999999999998887665
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=7.5e-23 Score=246.22 Aligned_cols=261 Identities=30% Similarity=0.353 Sum_probs=126.3
Q ss_pred ccEEEcccCcccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCC
Q 001274 362 LHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGS 441 (1109)
Q Consensus 362 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 441 (1109)
-..|++++|+|+ .+|..+. ++|+.|++.+|+++. +|. .+++|++|++++|+|+.. |.. .++|+.|++++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcc-cCc---ccccceeeccC
Confidence 455666666666 4454443 356666666666652 333 135566666666666532 321 23455555555
Q ss_pred ccccCCCCCCCccccccceeecccccccccCCccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCC
Q 001274 442 NRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIP 521 (1109)
Q Consensus 442 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 521 (1109)
|.++. +|.. ..+|+.|++++|+++. +|. .+++|+.|+|++|+|+++ |... .+|+.|++++|+|++ +|
T Consensus 272 N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~L-p~lp---~~L~~L~Ls~N~L~~-LP 338 (788)
T PRK15387 272 NPLTH-LPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASL-PALP---SELCKLWAYNNQLTS-LP 338 (788)
T ss_pred Cchhh-hhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCccccC-CCCc---ccccccccccCcccc-cc
Confidence 55542 2221 1334455555555552 222 124455555555555532 2211 234445555555543 23
Q ss_pred hhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcc
Q 001274 522 SEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLAR 601 (1109)
Q Consensus 522 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 601 (1109)
.. ..+|+.|+|++|+|+ .+|... .+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|++ +|... ++
T Consensus 339 ~l---p~~Lq~LdLS~N~Ls-~LP~lp---~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l~---s~ 403 (788)
T PRK15387 339 TL---PSGLQELSVSDNQLA-SLPTLP---SELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVLP---SE 403 (788)
T ss_pred cc---ccccceEecCCCccC-CCCCCC---cccceehhhccccc-cCccc---ccccceEEecCCcccC-CCCcc---cC
Confidence 21 124455555555555 233221 23444555555554 23322 1234444444444442 22211 23
Q ss_pred cceeeccCccccccccccccccchhhhhhccCCccccccccccccCccccceeecCCCccccCCchhhhccccceEEEcc
Q 001274 602 LTELQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGVIPYELGNLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLS 681 (1109)
Q Consensus 602 L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls 681 (1109)
|+. |++++|+|++ +|.. ..+|+.|+|++|+|+ .+|..+.++..|..++|+
T Consensus 404 L~~-------------------------LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 404 LKE-------------------------LMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred CCE-------------------------EEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 444 4555555553 3432 234566666666665 566666666666677777
Q ss_pred CcccccccCC
Q 001274 682 NNNLVGTVPN 691 (1109)
Q Consensus 682 ~N~l~g~~p~ 691 (1109)
+|+|+|.+|+
T Consensus 454 ~N~Ls~~~~~ 463 (788)
T PRK15387 454 GNPLSERTLQ 463 (788)
T ss_pred CCCCCchHHH
Confidence 7777666654
No 422
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=3.6e-22 Score=240.32 Aligned_cols=267 Identities=30% Similarity=0.366 Sum_probs=152.5
Q ss_pred ccceEEeecccccCccCcccCCCCcCcEEEccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcc
Q 001274 289 RLKKLYVYTNELNGTIPHELGNCTSAVEIDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLS 368 (1109)
Q Consensus 289 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 368 (1109)
.-..|++++|.++ .+|..+. .+|+.|++++|+++. +|. .++ +|++|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~------------------------~Lk~LdLs 250 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPP------------------------ELRTLEVS 250 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCC------------------------CCcEEEec
Confidence 3456677777776 4565554 356677777776663 232 123 45555555
Q ss_pred cCcccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCCccccCCC
Q 001274 369 INNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNI 448 (1109)
Q Consensus 369 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 448 (1109)
+|+|+ .+|.. .++|+.|++++|.++ .+|.. ...|+.|++++|+++.. |. .+++|+.|+|++|+|+++
T Consensus 251 ~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~L- 317 (788)
T PRK15387 251 GNQLT-SLPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLASL- 317 (788)
T ss_pred CCccC-cccCc---ccccceeeccCCchh-hhhhc---hhhcCEEECcCCccccc-cc---cccccceeECCCCccccC-
Confidence 55554 22321 234455555555554 22221 13455555555555532 22 124556666666666542
Q ss_pred CCCCccccccceeecccccccccCCccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccc
Q 001274 449 PPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLE 528 (1109)
Q Consensus 449 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 528 (1109)
|.. ..+|+.|++++|++++ +|.. ..+|++|+|++|+|+++ |.. .++|+.|++++|+|++ +|.. ..
T Consensus 318 p~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~L-P~l---p~~L~~L~Ls~N~L~~-LP~l---~~ 382 (788)
T PRK15387 318 PAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTS-LPAL---PS 382 (788)
T ss_pred CCC---cccccccccccCcccc-cccc---ccccceEecCCCccCCC-CCC---Ccccceehhhcccccc-Cccc---cc
Confidence 221 1245566666666664 3321 14677777777777743 332 2456677777777774 4432 24
Q ss_pred cccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcccceeecc
Q 001274 529 HLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMG 608 (1109)
Q Consensus 529 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 608 (1109)
+|+.|+|++|+|+ .+|... ++|+.|++++|+|++ +|..+ .+|+.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVLP---SELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCccc-CCCCcc---cCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 5777777777777 355432 467777888888773 56432 35677777777777 567777777777777777
Q ss_pred Ccccccccccccccc
Q 001274 609 GNIFSGSIPVALGQL 623 (1109)
Q Consensus 609 ~N~l~~~~p~~~~~l 623 (1109)
+|+|++.+|..+..+
T Consensus 454 ~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 454 GNPLSERTLQALREI 468 (788)
T ss_pred CCCCCchHHHHHHHH
Confidence 777777666655433
No 423
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.5e-21 Score=201.35 Aligned_cols=262 Identities=21% Similarity=0.304 Sum_probs=198.3
Q ss_pred cCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCceEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
-.|+++++||+|.||.++.|+ +-++++||||.-..+. +..++..|.+..+.+ ..++|..++-+..++.+..+|+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 479999999999999999998 4579999999775433 345677888888887 4689999998888888999999
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-----ceEEeeccccc
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-----QAHVGDFGLAK 954 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~DFG~a~ 954 (1109)
|.. |-||+++..-.+.+ |+.+++..+|.|++.-++|+| ++..|+|||||+|+||...+ .+.++|||+|+
T Consensus 104 dLL-GPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhh-CcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 999 88999998776654 999999999999999999999 78999999999999997543 69999999999
Q ss_pred cccCCCCCCc------cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHh-hhcc
Q 001274 955 LIDLPYSKSM------SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRS-IHEM 1027 (1109)
Q Consensus 955 ~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~-~~~~ 1027 (1109)
.+.++..... +...||-+||+-....+++-+.+.|+=|+|-++...+-|..||++......-...-+-. ....
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~ 257 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRS 257 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcccccc
Confidence 8865543332 45679999999999999999999999999999999999999999876332211111100 0011
Q ss_pred CCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1028 VPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
.+..++. ...+++....++.++ ..+-++-|..+-+..-+..+....
T Consensus 258 T~i~~Lc--------~g~P~efa~Yl~yvR---~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 258 TPIEVLC--------EGFPEEFATYLRYVR---RLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred CCHHHHH--------hcCHHHHHHHHHHHH---hcCcccCCCHHHHHHHHHHHHHhc
Confidence 1111111 123344444444444 556677788877766666554443
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=7.3e-22 Score=194.89 Aligned_cols=202 Identities=23% Similarity=0.325 Sum_probs=170.9
Q ss_pred HhcCCCCCceEecCCcceEEEEE-ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCC-CceeeEEEEEEeCCceEE
Q 001274 800 ATGNFSEGAVIGRGACGTVYKAT-LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRH-RNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~l 877 (1109)
..+.|.++++||.|+||.+|.|. ..+|+.||||+-.... .......|.++.+.+++ ..|..+.-+..+.++..+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC----CCcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 34789999999999999999997 5689999999876433 23457789999999965 678888888889999999
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC---CceEEeeccccc
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE---FQAHVGDFGLAK 954 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~a~ 954 (1109)
||+.. |-+|++...-.... ++.++++..+-|++.-++|+| .+++|||||||+|+|+.-+ ..+.++|||+|+
T Consensus 89 VMdLL-GPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeecc-CccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchh
Confidence 99998 78999888655443 899999999999999999999 7799999999999999644 468999999998
Q ss_pred cccCCCCCC------ccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcc
Q 001274 955 LIDLPYSKS------MSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLE 1011 (1109)
Q Consensus 955 ~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~ 1011 (1109)
.+.+..... .....||.+|.+-....+...+.+.|+-|+|.++..+--|..||++..
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 774322221 245679999999998888889999999999999999999999999865
No 425
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=6.9e-22 Score=221.01 Aligned_cols=167 Identities=23% Similarity=0.196 Sum_probs=128.9
Q ss_pred HhcCCCCCceEecCCcceEEEEEec--CCcEEEEEEeeccCC---CcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCc
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLA--NGEVIAVKKIKLRGE---GATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDS 874 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 874 (1109)
..++|.+.+.||+|+||+||+|+++ +++.||||+...... .....+.+.+|++++++++|+|+++.+.. .+.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~ 92 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK 92 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence 3468999999999999999999864 577889998752211 12235668999999999999999853322 246
Q ss_pred eEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCC-CCCceeeCCCCceEEeecccc
Q 001274 875 NLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDI-KSNNILLDEEFQAHVGDFGLA 953 (1109)
Q Consensus 875 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~DFG~a 953 (1109)
.++||||++|++|.. ... .. ...++.++++||+||| +.+|+|||| ||+|||++.++.+||+|||+|
T Consensus 93 ~~LVmE~~~G~~L~~-~~~------~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 93 DGLVRGWTEGVPLHL-ARP------HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred cEEEEEccCCCCHHH-hCc------cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 799999999999963 211 11 1467889999999999 789999999 999999999999999999999
Q ss_pred ccccCCCC-------CCccccccccceeccccccCC
Q 001274 954 KLIDLPYS-------KSMSAIAGSYGYIAPEYAYTM 982 (1109)
Q Consensus 954 ~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~ 982 (1109)
+....... .......+++.|+|||++...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 87653221 111345688899999988754
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=6.3e-22 Score=240.28 Aligned_cols=374 Identities=21% Similarity=0.268 Sum_probs=222.3
Q ss_pred chhHHHHHHHHHHhcCCCCCCCCC----CCCCCCCCCccce----------------eeecCCeEEEEeccCcccccccc
Q 001274 30 LTEEGVSLLEFKASLIDPSNNLES----WNSSDMTPCNWIG----------------VECTDFKVTSVDLHGLNLSGILS 89 (1109)
Q Consensus 30 ~~~~~~all~~k~~~~~~~~~~~~----W~~~~~~~c~w~g----------------v~C~~~~v~~l~l~~~~l~g~~~ 89 (1109)
..+|.+++++..+.+.=|. .+++ |++.+ ++|.-.. |.|....||.+..-+...+....
T Consensus 61 ~~~~~~~~~~~~~~l~~p~-~~~~~~~~~~~~~-~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~~~~ 138 (754)
T PRK15370 61 SPEEIKSKFECLRMLAFPA-YADNIQYSRGGAD-QYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASSAS 138 (754)
T ss_pred CHHHHHHHHHHHHHhcCCc-hhhccccccCCCC-cccccCCcchhhheeeecCCceEEecCCCcccccccccccccccCC
Confidence 3457789999999997553 3555 98764 8897655 77887778777766533222211
Q ss_pred cc--ccCccccceeecccCccCCCCC---ccc-----cCCCCCceEEccCCcccccCCchhhccccceEEEccccccccc
Q 001274 90 PR--ICDLPRLVEFNISMNFVTGSIP---TDL-----ANCSSLEILDLCTNRLHGVIPFQLFFINTLRKLYLCENYIFGE 159 (1109)
Q Consensus 90 ~~--~~~l~~L~~L~ls~n~~~~~~p---~~l-----~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 159 (1109)
.+ ..+.... .=+-..+.-.+.-+ ..+ +-..+.+.|+|+++.++ .+|..+. ++|+.|+|++|.++ .
T Consensus 139 ~~~~~~~~~~~-w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-s 213 (754)
T PRK15370 139 GSKDAVNYELI-WSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-S 213 (754)
T ss_pred CCCChhhHHHH-HHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-c
Confidence 10 0000000 00000000000000 001 11134566777777666 3554442 46777777777776 4
Q ss_pred ccccccCcCCCceEEeecCCCCCCCCcccccccccceeccccccccCCCCccccccccchhhhcccccccccCchhhhcc
Q 001274 160 IPEEIGNLTSLEELVIYSNNLTGAIPASISKLRQLRVIRAGHNSLSGPIPPEISECEGLEVLGLAQNSLEGFLPSELEKL 239 (1109)
Q Consensus 160 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 239 (1109)
+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. .+|++|+|++|+++ .+|..+.
T Consensus 214 LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~-- 282 (754)
T PRK15370 214 LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP-- 282 (754)
T ss_pred CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--
Confidence 555443 46777777777776 4565443 35777777777776 5565553 46777777777777 3555543
Q ss_pred ccccceecccccccCCCCCCccccccccceeeeeccceecCchhhhccCccceEEeecccccCccCcccCCCCcCcEEEc
Q 001274 240 RNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPKELGKLSRLKKLYVYTNELNGTIPHELGNCTSAVEIDL 319 (1109)
Q Consensus 240 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 319 (1109)
.+|++|+|++|+|+ .+|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|
T Consensus 283 ~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~L 353 (754)
T PRK15370 283 EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDV 353 (754)
T ss_pred CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEEC
Confidence 46777788888777 4555443 467778888887773 454433 577888888888774 555553 57888888
Q ss_pred cCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCcccCCCCcch----hcccccceEEccccc
Q 001274 320 SENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGTIPLEF----QNLTYLVDLQLFDNH 395 (1109)
Q Consensus 320 s~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~L~~N~ 395 (1109)
++|+++. +|..+ .++|+.|+|++|.++. +|..+. ..|+.|++++|+|+ .+|..+ ..++.+..|++.+|.
T Consensus 354 s~N~L~~-LP~~l--p~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Np 426 (754)
T PRK15370 354 SKNQITV-LPETL--PPTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNP 426 (754)
T ss_pred CCCCCCc-CChhh--cCCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCC
Confidence 8888873 45444 3678888888888874 455443 36888888888887 455443 345778888888888
Q ss_pred ccccCCCcccccCcCcEEEeccccccCc-cchhhhcccccceeecCCccc
Q 001274 396 LEGTIPPHIGVNSHLSVLDVSMNNLDGS-IPPHLCMYQKLIFLSLGSNRL 444 (1109)
Q Consensus 396 l~~~~p~~~~~~~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~L~~N~l 444 (1109)
++. ..+.+|+.| ++.+.+.|. ++...+.+.+++....-.+.+
T Consensus 427 ls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~~~~~l~~a~ 469 (754)
T PRK15370 427 FSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVRVTRPLHQAV 469 (754)
T ss_pred ccH------HHHHHHHHh-hhcccccCCcccccccccccccccchHHHHH
Confidence 862 344555555 444555442 233344445555433333333
No 427
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.84 E-value=1.5e-19 Score=206.30 Aligned_cols=260 Identities=30% Similarity=0.378 Sum_probs=200.3
Q ss_pred CCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcc-hhHHHHHHHHHhccCCCC-ceeeEEEEEEeCCceEEEEEe
Q 001274 804 FSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGAT-ADNSFLAEISTLGKIRHR-NIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 881 (1109)
|...+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.+++.+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999986 7889999976654432 467899999999999988 799999999777778999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeeccccccccCCC
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-QAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~~~ 960 (1109)
+.++++.+++........++......++.|++.++.|+| +.+++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977765432123888999999999999999999 77899999999999999998 79999999998654332
Q ss_pred CC-----CccccccccceeccccccC---CCCCccchhHHHHHHHHHHHhCCCCCCCcccC---CcHHHHHHHhhhccCC
Q 001274 961 SK-----SMSAIAGSYGYIAPEYAYT---MKVTEKCDIYSFGVVLLELITGKSPVQSLELG---GDLVTWVRRSIHEMVP 1029 (1109)
Q Consensus 961 ~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvll~elltg~~pf~~~~~~---~~~~~~~~~~~~~~~~ 1029 (1109)
.. ......++..|+|||.+.+ ..+....|+||+|++++++++|..||...... ......+.......
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS-- 234 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc--
Confidence 21 2456789999999999987 57889999999999999999999997654321 11222222111110
Q ss_pred CchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1030 TSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
......... .......+.+++.+|+..+|..|.++.+....
T Consensus 235 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSN------PELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccc------cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000 01223457789999999999999999988876
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=1.1e-20 Score=229.53 Aligned_cols=246 Identities=27% Similarity=0.429 Sum_probs=147.9
Q ss_pred cCcEEEccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCcccCCCCcchhcccccceEEcc
Q 001274 313 SAVEIDLSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLF 392 (1109)
Q Consensus 313 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 392 (1109)
+...|+++++.++. +|..+ .++|+.|+|++|.++. +|..+. .+|++|++++|+|+ .+|..+.
T Consensus 179 ~~~~L~L~~~~Lts-LP~~I--p~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~----------- 240 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACI--PEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP----------- 240 (754)
T ss_pred CceEEEeCCCCcCc-CCccc--ccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh-----------
Confidence 45678888887774 34333 2345555555555552 333322 24555555555555 2333221
Q ss_pred cccccccCCCcccccCcCcEEEeccccccCccchhhhcccccceeecCCccccCCCCCCCccccccceeecccccccccC
Q 001274 393 DNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSL 472 (1109)
Q Consensus 393 ~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 472 (1109)
.+|+.|+|++|++. .+|..+. .+|+.|++++|+|+. +|..+. ++|+.|++++|++++ +
T Consensus 241 ---------------~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-L 298 (754)
T PRK15370 241 ---------------DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-L 298 (754)
T ss_pred ---------------ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-C
Confidence 23445555555544 2333332 345555566555553 343332 356666666666664 3
Q ss_pred CccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCC
Q 001274 473 PIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCV 552 (1109)
Q Consensus 473 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 552 (1109)
|..+. ++|+.|++++|+++.+ |..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. +
T Consensus 299 P~~lp--~sL~~L~Ls~N~Lt~L-P~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~ 367 (754)
T PRK15370 299 PAHLP--SGITHLNVQSNSLTAL-PETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--P 367 (754)
T ss_pred cccch--hhHHHHHhcCCccccC-Ccccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--C
Confidence 33332 3677777777777753 43332 577888888888875 555543 67888888888887 5666553 5
Q ss_pred CCCeeecCCCcCccCCCcccccccccceecccccccccccCc----ccCCCcccceeeccCcccc
Q 001274 553 NLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPS----SLGGLARLTELQMGGNIFS 613 (1109)
Q Consensus 553 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~ 613 (1109)
+|+.|+|++|+|+ .+|..+. .+|+.|++++|+|+ .+|. .++.++++..|++.+|+++
T Consensus 368 ~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 368 TITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 7888888888888 4666554 36888888888887 3444 3444577888888888876
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2.2e-21 Score=231.62 Aligned_cols=261 Identities=21% Similarity=0.244 Sum_probs=192.7
Q ss_pred CCCceEecCCcceEEEEEec-CCcEEEEEEeec---cCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 805 SEGAVIGRGACGTVYKATLA-NGEVIAVKKIKL---RGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 805 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
...+.+|.|++|.|+.+... ....++.|.+.. .... ......+..|+-+-..++|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34578999999988877633 344455554432 1111 111222667888888899999988887777777666669
Q ss_pred EeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCC
Q 001274 880 EYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLP 959 (1109)
Q Consensus 880 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 959 (1109)
|||++ +|..++..... +...++..+++|+..|++|+| ..|+.|||+|++|+++..+|.+||+|||.+..+..+
T Consensus 401 E~~~~-Dlf~~~~~~~~---~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGK---LTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhcccc---cchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 99999877533 788899999999999999999 889999999999999999999999999999877544
Q ss_pred CC---CCccccccccceeccccccCCCCCc-cchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCchhhh
Q 001274 960 YS---KSMSAIAGSYGYIAPEYAYTMKVTE-KCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFD 1035 (1109)
Q Consensus 960 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1109)
.. ....+.+|+-.|+|||++.+..|++ ..||||.|+++..|.+|+.||......++....... ... .
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~--~~~---~---- 544 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY--SDQ---R---- 544 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc--ccc---c----
Confidence 43 2346778999999999999999975 689999999999999999999866533322100000 000 0
Q ss_pred hhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1036 KRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
...............+...++.++++++|.+|-|+++|++.=|...
T Consensus 545 ~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 545 NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 0000111112233456778999999999999999999998766543
No 430
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=1.4e-19 Score=186.52 Aligned_cols=142 Identities=20% Similarity=0.178 Sum_probs=108.3
Q ss_pred CceEecCCcceEEEEEecCCcEEEEEEeeccCCCcch-------h-----------------HHHHHHHHHhccCCCCce
Q 001274 807 GAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATA-------D-----------------NSFLAEISTLGKIRHRNI 862 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~-------~-----------------~~~~~E~~~l~~l~h~ni 862 (1109)
...||+|+||.||+|...+|+.||||+++........ . ....+|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999999888999999999754221111 0 122359999999987776
Q ss_pred eeEEEEEEeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHH-hhcCCCCeEecCCCCCceeeCC
Q 001274 863 VKLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYL-HYDCRPHIIHRDIKSNNILLDE 941 (1109)
Q Consensus 863 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dlkp~NIll~~ 941 (1109)
.....+.. ...++||||++++++........ .+++.....++.|++.++.|+ | +.+|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~---~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKDA---PLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhcC---CCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-
Confidence 43332222 23489999999887755432222 388899999999999999999 6 66999999999999998
Q ss_pred CCceEEeecccccccc
Q 001274 942 EFQAHVGDFGLAKLID 957 (1109)
Q Consensus 942 ~~~~kl~DFG~a~~~~ 957 (1109)
++.++++|||+|...+
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999998654
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.1e-19 Score=188.57 Aligned_cols=173 Identities=14% Similarity=0.113 Sum_probs=134.3
Q ss_pred HhcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcch-hH------HHHHHHHHhccCCCCceeeEEEEEEeC
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATA-DN------SFLAEISTLGKIRHRNIVKLYGFCYHQ 872 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~-~~------~~~~E~~~l~~l~h~niv~l~~~~~~~ 872 (1109)
..++|+..+++|.|+||.||.+.. ++..+|||.+.......+. .. .+.+|++.+.++.|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 358999999999999999999766 5778999999754332221 11 267999999999999999998886643
Q ss_pred --------CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCc
Q 001274 873 --------DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQ 944 (1109)
Q Consensus 873 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 944 (1109)
...++||||++|.+|.++.. ++. ....+++.++..+| +.|++|||+||+||+++.++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-
Confidence 35789999999999988731 232 24558999999999 88999999999999999998
Q ss_pred eEEeeccccccccCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHH
Q 001274 945 AHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELI 1001 (1109)
Q Consensus 945 ~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ell 1001 (1109)
++++|||..+....+... ..+.....|..++|+|+||+.+....
T Consensus 173 i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988754311111 11344556778999999999987653
No 432
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.79 E-value=6.1e-20 Score=215.89 Aligned_cols=251 Identities=20% Similarity=0.212 Sum_probs=182.9
Q ss_pred CCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHH--hccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEIST--LGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
+|...+.+|.+.|=+|.+|++++|. |+||++-..+.. -..+.|.++++- ...++|||++++..+-..+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~-~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPT-ISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCC-CCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667788999999999999998887 899999755432 223344443333 445589999999888777788899999
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|..+ +|++.+....- +...+...|+.|++.|+.-+| +.||.|||||.+|||++.-.-+.|+||..-+..--+.
T Consensus 102 yvkh-nLyDRlSTRPF---L~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRPF---LVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccchH---HHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9965 99999987653 788888999999999999999 8899999999999999999999999998766432222
Q ss_pred CCC--c----cccccccceeccccccCC----------C-CCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHH
Q 001274 961 SKS--M----SAIAGSYGYIAPEYAYTM----------K-VTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRR 1022 (1109)
Q Consensus 961 ~~~--~----~~~~gt~~y~aPE~~~~~----------~-~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~ 1022 (1109)
+.. . .+...-..|.|||.+... . .+++-||||+||++.|+++ |++||.- .+...-
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-------SQL~aY 247 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-------SQLLAY 247 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-------HHHHhH
Confidence 211 1 222334579999977542 1 5678999999999999999 7888862 122221
Q ss_pred hhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 001274 1023 SIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMID 1079 (1109)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~ 1079 (1109)
.-.+.......+.+..+ ..+..++..|++.||++|.+|+++++.-++
T Consensus 248 r~~~~~~~e~~Le~Ied----------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 248 RSGNADDPEQLLEKIED----------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred hccCccCHHHHHHhCcC----------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 11111111111111111 136689999999999999999999987433
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1.5e-18 Score=179.91 Aligned_cols=142 Identities=19% Similarity=0.188 Sum_probs=110.3
Q ss_pred CceEecCCcceEEEEEecCCcEEEEEEeeccCCCcch------------------------hHHHHHHHHHhccCCCCce
Q 001274 807 GAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATA------------------------DNSFLAEISTLGKIRHRNI 862 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~------------------------~~~~~~E~~~l~~l~h~ni 862 (1109)
...||+|+||.||+|++.+|+.||||++......... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999999754221100 1123578899999999887
Q ss_pred eeEEEEEEeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCC-CCeEecCCCCCceeeCC
Q 001274 863 VKLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCR-PHIIHRDIKSNNILLDE 941 (1109)
Q Consensus 863 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIll~~ 941 (1109)
.....+... ..++||||++++++........ .++..+..+++.|++.++.++| . .||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~---~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKDV---PLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhhc---cCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-
Confidence 544433332 3589999999886544322222 2678889999999999999999 5 7999999999999999
Q ss_pred CCceEEeecccccccc
Q 001274 942 EFQAHVGDFGLAKLID 957 (1109)
Q Consensus 942 ~~~~kl~DFG~a~~~~ 957 (1109)
++.++|+|||+++...
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 8899999999998765
No 434
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=1e-18 Score=184.30 Aligned_cols=194 Identities=23% Similarity=0.285 Sum_probs=137.3
Q ss_pred CCCceeeEEEEEEeC---------------------------CceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHH
Q 001274 858 RHRNIVKLYGFCYHQ---------------------------DSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIAL 910 (1109)
Q Consensus 858 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 910 (1109)
+|||||++.++|.+. ...|+||...+ .+|.+|+..+. .+......+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC----CchHHHHHHHH
Confidence 599999999887542 23488998885 49999997654 56667788999
Q ss_pred HHHHHHHHHhhcCCCCeEecCCCCCceee--CCCC--ceEEeecccccccc-----CCCCCCccccccccceeccccccC
Q 001274 911 GAAEGLCYLHYDCRPHIIHRDIKSNNILL--DEEF--QAHVGDFGLAKLID-----LPYSKSMSAIAGSYGYIAPEYAYT 981 (1109)
Q Consensus 911 ~i~~~l~~LH~~~~~~ivH~Dlkp~NIll--~~~~--~~kl~DFG~a~~~~-----~~~~~~~~~~~gt~~y~aPE~~~~ 981 (1109)
|+++|+.||| ++||.|||+|.+||++ |+|+ .++|+|||.+---+ -++........|.-.-||||+...
T Consensus 349 QlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999 8899999999999999 3443 57899999874321 122222334457778999999875
Q ss_pred CC------CCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhcc-CCCchhhhhhcchhhcccHHHHHHHHH
Q 001274 982 MK------VTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEM-VPTSELFDKRLDLSAKRTVEEMTLFLK 1054 (1109)
Q Consensus 982 ~~------~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1109)
.+ .-.|+|.|+.|.+.||+++...||.+.. +...+... +.+.. .++ +......+.+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG--em~L~~r~-Yqe~qLPal--------------p~~vpp~~rq 488 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG--EMLLDTRT-YQESQLPAL--------------PSRVPPVARQ 488 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccc--hheechhh-hhhhhCCCC--------------cccCChHHHH
Confidence 54 2358999999999999999999998632 11111100 11111 111 1122234678
Q ss_pred HHHhccCCCCCCCCCHHHHHHH
Q 001274 1055 IALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1055 li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
++...++.||++|++..-....
T Consensus 489 lV~~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred HHHHHhcCCccccCCccHHHhH
Confidence 8999999999999996544433
No 435
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=2.4e-20 Score=174.71 Aligned_cols=164 Identities=34% Similarity=0.597 Sum_probs=81.6
Q ss_pred CCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCee
Q 001274 478 NLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRL 557 (1109)
Q Consensus 478 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 557 (1109)
++++.+.|.||+|+++ .+|+.+..+.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++. +.|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3444555555555555 33444555555555555555555 34445555555555555555554 455555555555555
Q ss_pred ecCCCcCcc-CCCcccccccccceecccccccccccCcccCCCcccceeeccCccccccccccccccchhhhhhccCCcc
Q 001274 558 DLSRNQFTG-SAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFSGSIPVALGQLTALQIALNISHNN 636 (1109)
Q Consensus 558 ~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~ 636 (1109)
||++|++.. .+|..|..++.|+.|+|++|.+. .+|..+++++.|++ |.+..|.
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-------------------------~lp~dvg~lt~lqi-l~lrdnd 161 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-------------------------ILPPDVGKLTNLQI-LSLRDND 161 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-------------------------cCChhhhhhcceeE-EeeccCc
Confidence 555555432 23444444444444444444443 33333333333332 3333333
Q ss_pred ccccccccccCccccceeecCCCccccCCchhhhcc
Q 001274 637 LSGVIPYELGNLQMLEALYLDDNQLIGEIPASMGEQ 672 (1109)
Q Consensus 637 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l 672 (1109)
+- .+|.+++.|++|+.|.+++|+|+ .+|++++++
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 33 45666666666666666666665 555555543
No 436
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=5.8e-18 Score=171.36 Aligned_cols=188 Identities=14% Similarity=0.069 Sum_probs=138.3
Q ss_pred CCceEecCCcceEEEEEecCCcEEEEEEeeccCCC--cchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCceEEEEEec
Q 001274 806 EGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEG--ATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 806 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
+...|+.|+||+||.+.. .+++++.+.+.....- ......+.+|+++++++. |+++++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999998776 5788887777633221 111225789999999995 5889999886 4579999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCC-CCCceeeCCCCceEEeeccccccccCCCC
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDI-KSNNILLDEEFQAHVGDFGLAKLIDLPYS 961 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~DFG~a~~~~~~~~ 961 (1109)
+|.+|.+.... ....++.|+++++.++| +.||+|||| ||+||+++.++.++|+|||+|........
T Consensus 81 ~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 81 AGAAMYQRPPR----------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred cCccHHhhhhh----------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 99998654321 11347789999999999 789999999 79999999999999999999986543221
Q ss_pred C----C---c-----cccccccceeccccccCC-CCC-ccchhHHHHHHHHHHHhCCCCCCCcc
Q 001274 962 K----S---M-----SAIAGSYGYIAPEYAYTM-KVT-EKCDIYSFGVVLLELITGKSPVQSLE 1011 (1109)
Q Consensus 962 ~----~---~-----~~~~gt~~y~aPE~~~~~-~~~-~~~DvwSlGvll~elltg~~pf~~~~ 1011 (1109)
. . . .....++.|++|+...-- ..+ ...+.++-|..+|.++||+.+..+..
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 0 0 011256677777743321 233 56788999999999999999866443
No 437
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.7e-19 Score=203.51 Aligned_cols=187 Identities=27% Similarity=0.309 Sum_probs=157.9
Q ss_pred EecCCcceEEEEE----ecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCceEEEEEeccC
Q 001274 810 IGRGACGTVYKAT----LANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDSNLLLYEYMEN 884 (1109)
Q Consensus 810 lG~G~fg~Vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 884 (1109)
+|+|+||.|+.++ .+.+..+|.|+.+..............|..++...+ ||.+|++.-.++.+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999875 234778999988755333222235667888888886 99999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCc
Q 001274 885 GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSM 964 (1109)
Q Consensus 885 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 964 (1109)
|.+...+..... +++.........++-+++++| +.+++|||+|++||+++.+|++++.|||.++..-..
T Consensus 82 g~lft~l~~~~~---f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~----- 150 (612)
T KOG0603|consen 82 GDLFTRLSKEVM---FDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE----- 150 (612)
T ss_pred chhhhccccCCc---hHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhh-----
Confidence 999888876554 777788888888999999999 889999999999999999999999999999865311
Q ss_pred cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 001274 965 SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQS 1009 (1109)
Q Consensus 965 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~ 1009 (1109)
...+||..|||||++. ....++|.||||++++||+||..||..
T Consensus 151 ~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 151 KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 1128999999999988 567899999999999999999999985
No 438
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=6.1e-18 Score=180.81 Aligned_cols=235 Identities=21% Similarity=0.267 Sum_probs=149.0
Q ss_pred CCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCC----------CceeeEEEEEE
Q 001274 803 NFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRH----------RNIVKLYGFCY 870 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 870 (1109)
.+..++.||.|+++.||.+++. +++++|||++...... ....+++.+|.-....+.+ -.++--++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3455678999999999999976 5899999999766533 2245667777655555432 12222222221
Q ss_pred e---------CC--------ceEEEEEeccCCCHHHHhcc---CCC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 001274 871 H---------QD--------SNLLLYEYMENGSLGEQLHG---NKQ-TCLLDWDARYRIALGAAEGLCYLHYDCRPHIIH 929 (1109)
Q Consensus 871 ~---------~~--------~~~lv~e~~~~gsL~~~l~~---~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 929 (1109)
. .. ..+++|+-+ .++|.+++.. ... ...+....+..+..|+++.+++|| ..|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEe
Confidence 1 11 225678877 4688877542 111 112344555677799999999999 779999
Q ss_pred cCCCCCceeeCCCCceEEeeccccccccCCCCCCccccccccceeccccccC--------CCCCccchhHHHHHHHHHHH
Q 001274 930 RDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYT--------MKVTEKCDIYSFGVVLLELI 1001 (1109)
Q Consensus 930 ~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvll~ell 1001 (1109)
+||+|+|++++.+|.++++||+.....+... .....+..|.+||.... ..++.+.|.|++|+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~----~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRY----RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEE----EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCcee----eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 9999999999999999999999887654211 11345578999997643 24788999999999999999
Q ss_pred hCCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCC
Q 001274 1002 TGKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNR 1067 (1109)
Q Consensus 1002 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R 1067 (1109)
+|+.||........ ... ... ...+.++.+..+|..+++++|++|
T Consensus 245 C~~lPf~~~~~~~~--------------~~~----~f~----~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEAD--------------PEW----DFS----RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGST--------------SGG----GGT----TSS---HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCcccc--------------ccc----cch----hcCCcCHHHHHHHHHHccCCcccC
Confidence 99999985431111 000 111 112445678899999999999988
No 439
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.74 E-value=7.8e-18 Score=191.12 Aligned_cols=220 Identities=25% Similarity=0.377 Sum_probs=164.2
Q ss_pred hccCCCCceeeEEEEEEeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 001274 854 LGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIK 933 (1109)
Q Consensus 854 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 933 (1109)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.....+ +++.-...++++|+.||.|+|+. . -..|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~--~d~~F~~s~~rdi~~Gl~ylh~s-~-i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIK--LDYFFILSFIRDISKGLAYLHNS-P-IGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccC--ccHHHHHHHHHHHHHHHHHHhcC-c-ceeeeeec
Confidence 46789999999999999999999999999999999999874433 88889999999999999999953 2 22999999
Q ss_pred CCceeeCCCCceEEeeccccccccC-CCCCCccccccccceeccccccCCC-------CCccchhHHHHHHHHHHHhCCC
Q 001274 934 SNNILLDEEFQAHVGDFGLAKLIDL-PYSKSMSAIAGSYGYIAPEYAYTMK-------VTEKCDIYSFGVVLLELITGKS 1005 (1109)
Q Consensus 934 p~NIll~~~~~~kl~DFG~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlGvll~elltg~~ 1005 (1109)
..|+++|..+.+|++|||+...... ..........-..-|.|||.+.... .+.+.||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 9999999999999999999886642 1111122223455699999887642 4678999999999999999999
Q ss_pred CCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhcc
Q 001274 1006 PVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDARQSV 1084 (1109)
Q Consensus 1006 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 1084 (1109)
||.......+..+.+....... ...+.+.+... .+....+..++..||..+|++||++++|-..++.+....
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~---~~~~rP~i~~~----~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGG---SNPFRPSIELL----NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ccccccccCChHHHHHHHHhcC---CCCcCcchhhh----hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 9986543333223332211101 11111111111 122336889999999999999999999998887776543
No 440
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=7e-20 Score=207.82 Aligned_cols=207 Identities=22% Similarity=0.251 Sum_probs=108.8
Q ss_pred eeecccCccC-CCCCccccCCCCCceEEccCCccccc----CCchhhccccceEEEcccccccc------cccccccCcC
Q 001274 100 EFNISMNFVT-GSIPTDLANCSSLEILDLCTNRLHGV----IPFQLFFINTLRKLYLCENYIFG------EIPEEIGNLT 168 (1109)
Q Consensus 100 ~L~ls~n~~~-~~~p~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~------~~p~~l~~l~ 168 (1109)
.|+|..+.++ +..+..+..+..|++|+|+++.+++. ++..+...+++++|+++++.+.+ .++..++.++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777776 34556666777788888888877543 33444455667777777776652 2334555566
Q ss_pred CCceEEeecCCCCCCCCcccccccc---cceeccccccccCCCCccccccccchhhhcccccccccCchhhhcc-ccccc
Q 001274 169 SLEELVIYSNNLTGAIPASISKLRQ---LRVIRAGHNSLSGPIPPEISECEGLEVLGLAQNSLEGFLPSELEKL-RNLTD 244 (1109)
Q Consensus 169 ~L~~L~L~~n~l~~~~p~~~~~l~~---L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~ 244 (1109)
+|++|++++|.+.+..+..+..+.+ |+.|++++|.+++... ..+...+..+ ++|+.
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~--------------------~~l~~~l~~~~~~L~~ 141 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGL--------------------RLLAKGLKDLPPALEK 141 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHH--------------------HHHHHHHHhCCCCceE
Confidence 6666666666665544444444433 5555555555442100 0112223333 45555
Q ss_pred eecccccccCC----CCCCccccccccceeeeeccceec----CchhhhccCccceEEeecccccCc----cCcccCCCC
Q 001274 245 LILWQNHLSGE----IPPTIGNIQSLELLALHENSFSGG----LPKELGKLSRLKKLYVYTNELNGT----IPHELGNCT 312 (1109)
Q Consensus 245 L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~l~ 312 (1109)
|+|++|.+++. ++..+..+.+|++|++++|.+++. ++..+..+++|++|++++|.+++. +...+..++
T Consensus 142 L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~ 221 (319)
T cd00116 142 LVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLK 221 (319)
T ss_pred EEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccC
Confidence 55555555421 122233334555555555555422 222334445566666666655422 223344555
Q ss_pred cCcEEEccCCcccC
Q 001274 313 SAVEIDLSENQLTG 326 (1109)
Q Consensus 313 ~L~~L~Ls~n~l~~ 326 (1109)
+|++|++++|.+++
T Consensus 222 ~L~~L~ls~n~l~~ 235 (319)
T cd00116 222 SLEVLNLGDNNLTD 235 (319)
T ss_pred CCCEEecCCCcCch
Confidence 66666666666553
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=5.5e-20 Score=208.71 Aligned_cols=249 Identities=24% Similarity=0.264 Sum_probs=152.4
Q ss_pred EeccCccccc-cccccccCccccceeecccCccCCC----CCccccCCCCCceEEccCCcccc------cCCchhhcccc
Q 001274 77 VDLHGLNLSG-ILSPRICDLPRLVEFNISMNFVTGS----IPTDLANCSSLEILDLCTNRLHG------VIPFQLFFINT 145 (1109)
Q Consensus 77 l~l~~~~l~g-~~~~~~~~l~~L~~L~ls~n~~~~~----~p~~l~~l~~L~~L~Ls~n~l~~------~~~~~l~~l~~ 145 (1109)
|+|.++++++ .....+..+++|+.|+++++.+++. +++.+...+.|++|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 5666666663 3334455677788888888888543 56667778888899998888762 23345666778
Q ss_pred ceEEEcccccccccccccccCcCC---CceEEeecCCCCC----CCCcccccc-cccceeccccccccCC----CCcccc
Q 001274 146 LRKLYLCENYIFGEIPEEIGNLTS---LEELVIYSNNLTG----AIPASISKL-RQLRVIRAGHNSLSGP----IPPEIS 213 (1109)
Q Consensus 146 L~~L~L~~n~l~~~~p~~l~~l~~---L~~L~L~~n~l~~----~~p~~~~~l-~~L~~L~l~~n~l~~~----~p~~l~ 213 (1109)
|++|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 162 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH
Confidence 999999999888766766666666 9999999998873 233445566 7788888888887742 223344
Q ss_pred ccccchhhhccccccccc----CchhhhccccccceecccccccCC----CCCCccccccccceeeeeccceecCchhhh
Q 001274 214 ECEGLEVLGLAQNSLEGF----LPSELEKLRNLTDLILWQNHLSGE----IPPTIGNIQSLELLALHENSFSGGLPKELG 285 (1109)
Q Consensus 214 ~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 285 (1109)
.+.+|++|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++.....+.
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~ 242 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALA 242 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHH
Confidence 555677777777766632 223344445677777776666532 223344455566666666665543222222
Q ss_pred c-----cCccceEEeecccccC----ccCcccCCCCcCcEEEccCCccc
Q 001274 286 K-----LSRLKKLYVYTNELNG----TIPHELGNCTSAVEIDLSENQLT 325 (1109)
Q Consensus 286 ~-----l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~Ls~n~l~ 325 (1109)
. .+.|++|++++|.++. .+...+..+++|+++++++|.++
T Consensus 243 ~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 243 SALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 1 2455555555555541 12223333345555555555554
No 442
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=2.1e-19 Score=168.43 Aligned_cols=167 Identities=26% Similarity=0.487 Sum_probs=120.8
Q ss_pred cccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecccccccccccCcccCCCcccceee
Q 001274 527 LEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQ 606 (1109)
Q Consensus 527 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 606 (1109)
+.+++.|.||+|+++ .+|..+..+.+|+.|++++|+|+ .+|..+..+++|+.|+++-|++. ..|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 344445555555555 44445555555555555555555 45555555555555555555555 5555566666666666
Q ss_pred ccCcccc-ccccccccccchhhhhhccCCccccccccccccCccccceeecCCCccccCCchhhhccccceEEEccCccc
Q 001274 607 MGGNIFS-GSIPVALGQLTALQIALNISHNNLSGVIPYELGNLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLSNNNL 685 (1109)
Q Consensus 607 l~~N~l~-~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls~N~l 685 (1109)
|+.|++. ..+|..|+.++.|+ .|+|+.|.+. .+|.++++|++||.|.+.+|.|. ++|.+++.+..|++|.+.+|+|
T Consensus 109 ltynnl~e~~lpgnff~m~tlr-alyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLR-ALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred ccccccccccCCcchhHHHHHH-HHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 6666554 36788888888887 6999999998 78999999999999999999998 8999999999999999999999
Q ss_pred ccccCCCccccccc
Q 001274 686 VGTVPNTTVFRRID 699 (1109)
Q Consensus 686 ~g~~p~~~~~~~~~ 699 (1109)
+-..|..+++....
T Consensus 186 ~vlppel~~l~l~~ 199 (264)
T KOG0617|consen 186 TVLPPELANLDLVG 199 (264)
T ss_pred eecChhhhhhhhhh
Confidence 98888776655443
No 443
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=9.5e-18 Score=203.11 Aligned_cols=195 Identities=24% Similarity=0.287 Sum_probs=159.5
Q ss_pred hcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC---CCceeeEEEEEEeCCceEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR---HRNIVKLYGFCYHQDSNLL 877 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~l 877 (1109)
...|.+.+.||+|+||+||+|...+|+.||+|+-+.... + +|.-=.+++.+|+ -+.|..+..++...+.-++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~--W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP--W---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc--e---eeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 357888899999999999999988899999998764332 1 2333344455555 2345566666667788899
Q ss_pred EEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeC-------CCCceEEeec
Q 001274 878 LYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLD-------EEFQAHVGDF 950 (1109)
Q Consensus 878 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-------~~~~~kl~DF 950 (1109)
|+||.+.|+|.+++...+. ++|..+..++.|+++.+++|| ..+|||+||||+|+|+. ....++|+||
T Consensus 772 v~ey~~~Gtlld~~N~~~~---m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTNKV---MDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred eeeccccccHHHhhccCCC---CCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 9999999999999985554 899999999999999999999 88999999999999994 2346999999
Q ss_pred cccccccC-CCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCC
Q 001274 951 GLAKLIDL-PYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSP 1006 (1109)
Q Consensus 951 G~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~p 1006 (1109)
|.+..+.. +........++|-.+-.+|+..+++|++.+|-|.++.+++-|+.|++-
T Consensus 846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99976542 233455777899999999999999999999999999999999999864
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.69 E-value=1.8e-16 Score=164.72 Aligned_cols=137 Identities=20% Similarity=0.237 Sum_probs=104.9
Q ss_pred CCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-----CCCceeeEEEEEEeCC---ce
Q 001274 804 FSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-----RHRNIVKLYGFCYHQD---SN 875 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~ 875 (1109)
+...+.||+|+||.||. .-+++.. +||++..... ...+.+.+|+++++.+ .||||++++|++..+. ..
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 34457899999999995 3223444 7888865332 2456789999999999 5799999999998864 33
Q ss_pred E-EEEEe--ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHH-HHHhhcCCCCeEecCCCCCceeeCC----CCceEE
Q 001274 876 L-LLYEY--MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGL-CYLHYDCRPHIIHRDIKSNNILLDE----EFQAHV 947 (1109)
Q Consensus 876 ~-lv~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~kl 947 (1109)
+ +|+|| +++|+|.+++.... +++. ..++.+++.++ +||| +.+|+||||||+||+++. ++.++|
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEE
Confidence 3 78999 66799999996532 5554 35677888777 9999 789999999999999974 348999
Q ss_pred eecccc
Q 001274 948 GDFGLA 953 (1109)
Q Consensus 948 ~DFG~a 953 (1109)
+||+-+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 995444
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=3.2e-16 Score=167.26 Aligned_cols=148 Identities=18% Similarity=0.181 Sum_probs=113.4
Q ss_pred HHhcCCCCCceEecCCcceEEEEE--ecCCcEEEEEEeeccCCCcc----------------------hhHHHHHHHHHh
Q 001274 799 EATGNFSEGAVIGRGACGTVYKAT--LANGEVIAVKKIKLRGEGAT----------------------ADNSFLAEISTL 854 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~~~~~~~~~~----------------------~~~~~~~E~~~l 854 (1109)
.....|.+.+.||+|+||.||+|+ ..+|+.||+|+++....... ....+..|++.+
T Consensus 25 ~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L 104 (237)
T smart00090 25 NRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNL 104 (237)
T ss_pred hcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHH
Confidence 333468889999999999999998 45899999999975421100 012356899999
Q ss_pred ccCCCC--ceeeEEEEEEeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCC-eEecC
Q 001274 855 GKIRHR--NIVKLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPH-IIHRD 931 (1109)
Q Consensus 855 ~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~D 931 (1109)
+++.+. .+.+++++ ...++||||++++++..+...... ....+...++.||+.++.+|| ..+ ++|||
T Consensus 105 ~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~D 174 (237)
T smart00090 105 QRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVE---PEEEEEFELYDDILEEMRKLY---KEGELVHGD 174 (237)
T ss_pred HHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCC---cchHHHHHHHHHHHHHHHHHH---hcCCEEeCC
Confidence 999753 34444443 235899999999888766533222 556667899999999999999 778 99999
Q ss_pred CCCCceeeCCCCceEEeecccccccc
Q 001274 932 IKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 932 lkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
|||+||+++ ++.++++|||.+....
T Consensus 175 ikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 175 LSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred CChhhEEEE-CCCEEEEEChhhhccC
Confidence 999999999 8899999999988654
No 446
>PLN03150 hypothetical protein; Provisional
Probab=99.66 E-value=2.8e-16 Score=191.21 Aligned_cols=149 Identities=32% Similarity=0.513 Sum_probs=117.9
Q ss_pred CCchhHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC-----ccceeeecC------CeEEEEeccCccccccccccccCcc
Q 001274 28 TSLTEEGVSLLEFKASLIDPSNNLESWNSSDMTPC-----NWIGVECTD------FKVTSVDLHGLNLSGILSPRICDLP 96 (1109)
Q Consensus 28 ~~~~~~~~all~~k~~~~~~~~~~~~W~~~~~~~c-----~w~gv~C~~------~~v~~l~l~~~~l~g~~~~~~~~l~ 96 (1109)
.+...|..||++||+++.+|.. .+|+++ +| .|.||+|+. .+|+.++|+++++.|.+|+.++.++
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~--~~W~g~---~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR--FGWNGD---PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc--CCCCCC---CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 4456789999999999977652 589753 34 799999952 2588888888888888888888888
Q ss_pred ccceeecccCccCCCCCccccCCCCCceEEccCCcccccCCchhhccccceEEEcccccccccccccccCc-CCCceEEe
Q 001274 97 RLVEFNISMNFVTGSIPTDLANCSSLEILDLCTNRLHGVIPFQLFFINTLRKLYLCENYIFGEIPEEIGNL-TSLEELVI 175 (1109)
Q Consensus 97 ~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~L 175 (1109)
+|+.|+|++|.++|.+|..++.+++|++|||++|+++|.+|..++.+++|++|+|++|.++|.+|..++.+ .++..+++
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~ 522 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNF 522 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEe
Confidence 88888888888888888888888888888888888888888888888888888888888888888777653 45666777
Q ss_pred ecCCCC
Q 001274 176 YSNNLT 181 (1109)
Q Consensus 176 ~~n~l~ 181 (1109)
.+|...
T Consensus 523 ~~N~~l 528 (623)
T PLN03150 523 TDNAGL 528 (623)
T ss_pred cCCccc
Confidence 776543
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=9.8e-16 Score=160.31 Aligned_cols=143 Identities=20% Similarity=0.177 Sum_probs=110.7
Q ss_pred HHhcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcc--------------------hhHHHHHHHHHhccCC
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGAT--------------------ADNSFLAEISTLGKIR 858 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~E~~~l~~l~ 858 (1109)
.....|.+.+.||+|+||.||+|..++|+.||||++........ ....+..|..++.++.
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 33334788899999999999999988899999998764321100 1123567888888887
Q ss_pred CC--ceeeEEEEEEeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCc
Q 001274 859 HR--NIVKLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNN 936 (1109)
Q Consensus 859 h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 936 (1109)
|+ .+...++ ....++||||+++++|...... .....++.+++.++.++| ..+++||||||+|
T Consensus 92 ~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~N 155 (198)
T cd05144 92 EEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFN 155 (198)
T ss_pred HcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCccc
Confidence 76 4444443 2456899999999998765321 234578899999999999 7899999999999
Q ss_pred eeeCCCCceEEeecccccccc
Q 001274 937 ILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 937 Ill~~~~~~kl~DFG~a~~~~ 957 (1109)
|++++++.++|+|||.+....
T Consensus 156 ill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 156 ILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EEEcCCCcEEEEECCccccCC
Confidence 999999999999999997554
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.63 E-value=1.6e-15 Score=160.71 Aligned_cols=136 Identities=20% Similarity=0.280 Sum_probs=113.7
Q ss_pred ceEecCCcceEEEEEecCCcEEEEEEeeccCCCcc------hhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 808 AVIGRGACGTVYKATLANGEVIAVKKIKLRGEGAT------ADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
+.||+|++|.||+|++ .+..|++|+......... ....+.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 577899998653322111 124577899999999999988777777777888999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++|++|.+++.... + .+..++.+++.++.++| ..+++|||++|+||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986432 2 78889999999999999 78999999999999999 78999999998874
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62 E-value=3e-15 Score=180.65 Aligned_cols=139 Identities=19% Similarity=0.264 Sum_probs=112.6
Q ss_pred cCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCC------cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEG------ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 875 (1109)
..|...++||+|+||+||+|.+.+. .+++|+...+... ....+.+.+|+++++.++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 4556788999999999999987644 3444443222111 11235688999999999999998888888877888
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++||||+++++|.+++. ....++.++++++.||| +.+++|||+||+||++ .++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999998875 34678999999999999 7899999999999999 677999999999985
Q ss_pred c
Q 001274 956 I 956 (1109)
Q Consensus 956 ~ 956 (1109)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 3
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62 E-value=6.3e-16 Score=182.77 Aligned_cols=208 Identities=25% Similarity=0.303 Sum_probs=142.3
Q ss_pred cCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYE 880 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 880 (1109)
.+|..++.|-.|+||.||.++++ ..+.+|+| +... ..+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq-------~lilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQ-------NLILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-cccc-------chhhhc--cccccCCccee-----------------
Confidence 57888999999999999999977 46778884 3311 111111 33333444444
Q ss_pred eccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCC
Q 001274 881 YMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPY 960 (1109)
Q Consensus 881 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 960 (1109)
|+=...++..+. ++.+. +.+++|+| +.+|+|||+||+|.+|+.-|++|++|||+++......
T Consensus 136 ----gDc~tllk~~g~---lPvdm--------vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ----GDCATLLKNIGP---LPVDM--------VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ----chhhhhcccCCC---Ccchh--------hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 333334433222 33333 67899999 8899999999999999999999999999986542111
Q ss_pred C--------------CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 961 S--------------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 961 ~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
. ...+..+||+.|+|||++..+.|+..+|.|++|+++||.+.|+.||.+... .+.+...+.+
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp----eelfg~visd 273 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP----EELFGQVISD 273 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH----HHHHhhhhhh
Confidence 0 011456899999999999999999999999999999999999999986432 2333333333
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCC
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPT 1069 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt 1069 (1109)
.+...+- + .....+...++.+.++.+|..|--
T Consensus 274 ~i~wpE~-d----------ea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 274 DIEWPEE-D----------EALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hcccccc-C----------cCCCHHHHHHHHHHHHhChHhhcc
Confidence 3222211 1 111234567888888999999843
No 451
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.61 E-value=2.7e-15 Score=157.43 Aligned_cols=133 Identities=20% Similarity=0.287 Sum_probs=107.3
Q ss_pred eEecCCcceEEEEEecCCcEEEEEEeeccCCCcc------hhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEec
Q 001274 809 VIGRGACGTVYKATLANGEVIAVKKIKLRGEGAT------ADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYM 882 (1109)
Q Consensus 809 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 882 (1109)
.||+|+||+||+|++ ++..|++|+......... ....+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999996 478899998654322111 1256778999999998887655555566677789999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
+|++|.+++.... . .++.+++.++.++| +.+++|||++|+||+++ ++.++++|||.+...
T Consensus 80 ~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN----D------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH----H------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999998875421 1 78999999999999 88999999999999999 789999999998753
No 452
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.60 E-value=4.3e-16 Score=172.87 Aligned_cols=175 Identities=25% Similarity=0.329 Sum_probs=132.7
Q ss_pred ceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 001274 874 SNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLA 953 (1109)
Q Consensus 874 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 953 (1109)
+.|+.|++|+..+|.+|+.........++.....++.|++.|++| ++.+|+|+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 568999999999999999876665668899999999999999999 38899999999999999999999999998
Q ss_pred ccccCCC-----CCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCcHHHHHHHhhhcc
Q 001274 954 KLIDLPY-----SKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT-GKSPVQSLELGGDLVTWVRRSIHEM 1027 (1109)
Q Consensus 954 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 1027 (1109)
....... ....+..+||..||+||.+.+..|+.|+||||+|++++|+++ =..+|+.. ......-.+.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-------~t~~d~r~g~ 476 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-------ATLTDIRDGI 476 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-------HhhhhhhcCC
Confidence 7665333 223456789999999999999999999999999999999987 33333211 1111111122
Q ss_pred CCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 001274 1028 VPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVI 1074 (1109)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl 1074 (1109)
+|..-+.+ . +.=..++.+++...|++||++.++.
T Consensus 477 ip~~~~~d---------~----p~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 477 IPPEFLQD---------Y----PEEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred CChHHhhc---------C----cHHHHHHHHhcCCCcccCchHHHHh
Confidence 22111111 1 1224688999999999999655543
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=2.3e-14 Score=148.73 Aligned_cols=138 Identities=23% Similarity=0.298 Sum_probs=98.5
Q ss_pred CceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHH----------------------HHHHHHhccCCCC--ce
Q 001274 807 GAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSF----------------------LAEISTLGKIRHR--NI 862 (1109)
Q Consensus 807 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~----------------------~~E~~~l~~l~h~--ni 862 (1109)
.+.||+|+||+||+|++.+++.||||++............+ ..|.+.+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999987432221111111 3455556555433 24
Q ss_pred eeEEEEEEeCCceEEEEEeccCCCHHHH-hccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCC-CCeEecCCCCCceeeC
Q 001274 863 VKLYGFCYHQDSNLLLYEYMENGSLGEQ-LHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCR-PHIIHRDIKSNNILLD 940 (1109)
Q Consensus 863 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIll~ 940 (1109)
.+.+++ ...++||||++++.+... +.... .. .....++.+++.++.++| . .+|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE
Confidence 444432 346899999998554221 11111 11 567789999999999999 6 7999999999999999
Q ss_pred CCCceEEeecccccccc
Q 001274 941 EEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 941 ~~~~~kl~DFG~a~~~~ 957 (1109)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8999999999997654
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.53 E-value=3.7e-14 Score=141.51 Aligned_cols=135 Identities=22% Similarity=0.187 Sum_probs=112.9
Q ss_pred CCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCC--CceeeEEEEEEeCCceEEEEEecc
Q 001274 806 EGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRH--RNIVKLYGFCYHQDSNLLLYEYME 883 (1109)
Q Consensus 806 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~ 883 (1109)
+.+.||+|.++.||+++..+ ..+++|....... ...+.+|+..++.++| ..+++++++....+..+++|||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence 45789999999999999864 7899998863321 4578899999999976 589999998888888999999999
Q ss_pred CCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccc
Q 001274 884 NGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 884 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
++.+..+ +......++.+++++++++|.....+++|+|++|+||+++.++.++++|||.++.
T Consensus 77 g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 77 GETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8777543 4456677899999999999954335799999999999999999999999999874
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.49 E-value=1.9e-15 Score=167.09 Aligned_cols=192 Identities=34% Similarity=0.483 Sum_probs=120.2
Q ss_pred ccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecC
Q 001274 481 NLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLS 560 (1109)
Q Consensus 481 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 560 (1109)
.-...||+.|++. .+|..+..+-.|+.+.|.+|.|. .+|..++++..|++|||+.|+++ ..|..+..|+ |+.|-++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3344555555555 34555555555555555555555 45555555666666666666665 4555555544 5566666
Q ss_pred CCcCccCCCcccccccccceecccccccccccCcccCCCcccceeeccCccccccccccccccchhhhhhccCCcccccc
Q 001274 561 RNQFTGSAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGV 640 (1109)
Q Consensus 561 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~ 640 (1109)
+|+++ .+|+.++.+..|..||.+.|.+. .+|..++++.+|+.|.+..|.+. .+|+++..|+- +.||+|+|+++ .
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpL--i~lDfScNkis-~ 225 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPL--IRLDFSCNKIS-Y 225 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCce--eeeecccCcee-e
Confidence 66665 45555665556666666666665 45555666666666666666665 55555554433 24788888887 7
Q ss_pred ccccccCccccceeecCCCccccCCchhhhccc---cceEEEccCc
Q 001274 641 IPYELGNLQMLEALYLDDNQLIGEIPASMGEQM---SLLVCNLSNN 683 (1109)
Q Consensus 641 ~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~---~L~~l~ls~N 683 (1109)
+|..|.+|+.|++|-|.+|.|. ..|+.++..- -.++|+..-.
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 8999999999999999999998 8888876543 3455655443
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=2.5e-13 Score=145.42 Aligned_cols=137 Identities=19% Similarity=0.230 Sum_probs=106.2
Q ss_pred CceEe-cCCcceEEEEEecCCcEEEEEEeeccCC-----------CcchhHHHHHHHHHhccCCCCce--eeEEEEEEeC
Q 001274 807 GAVIG-RGACGTVYKATLANGEVIAVKKIKLRGE-----------GATADNSFLAEISTLGKIRHRNI--VKLYGFCYHQ 872 (1109)
Q Consensus 807 ~~~lG-~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 872 (1109)
...|| .|+.|+||.++.. +..++||.+...+. .......+.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35788 9999999999885 77899998853211 11233567889999999988774 6677664433
Q ss_pred Cc----eEEEEEeccC-CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEE
Q 001274 873 DS----NLLLYEYMEN-GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHV 947 (1109)
Q Consensus 873 ~~----~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 947 (1109)
.. .++|||+++| .+|.+++.... ++.. .+.+|+.++.+|| +.||+||||||+|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~----l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAP----LSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCC----CCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEE
Confidence 22 2599999997 69988876432 4443 3568999999999 889999999999999999999999
Q ss_pred eecccccc
Q 001274 948 GDFGLAKL 955 (1109)
Q Consensus 948 ~DFG~a~~ 955 (1109)
+|||.++.
T Consensus 184 IDfg~~~~ 191 (239)
T PRK01723 184 IDFDRGEL 191 (239)
T ss_pred EECCCccc
Confidence 99998875
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=6.1e-15 Score=176.53 Aligned_cols=261 Identities=24% Similarity=0.283 Sum_probs=194.5
Q ss_pred cCCCCCceEecCCcceEEEEEec--CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCC-CCceeeEEEEEEeCCceEEE
Q 001274 802 GNFSEGAVIGRGACGTVYKATLA--NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIR-HRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 802 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 878 (1109)
..|...+.||+|+|+.|-.+... ....+|+|.+..........+....|..+-+.+. |+|++.+++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45777788999999999888653 3445677766654433344455556888877776 99999999999999999999
Q ss_pred EEeccCCCHHHHh-ccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC-ceEEeeccccccc
Q 001274 879 YEYMENGSLGEQL-HGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF-QAHVGDFGLAKLI 956 (1109)
Q Consensus 879 ~e~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~ 956 (1109)
.+|.+++++.+-+ ..... ..+.........|+..++.|+|. ..++.|||+||+|.+++..+ ..+++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~~~--~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDST--GTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCCcc--CCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999998888 43321 26667778899999999999995 34899999999999999999 9999999999876
Q ss_pred cC--CCCCCcccccc-ccceeccccccCCC-CCccchhHHHHHHHHHHHhCCCCCCCccc-CCcHHHHHHHhhh-ccCCC
Q 001274 957 DL--PYSKSMSAIAG-SYGYIAPEYAYTMK-VTEKCDIYSFGVVLLELITGKSPVQSLEL-GGDLVTWVRRSIH-EMVPT 1030 (1109)
Q Consensus 957 ~~--~~~~~~~~~~g-t~~y~aPE~~~~~~-~~~~~DvwSlGvll~elltg~~pf~~~~~-~~~~~~~~~~~~~-~~~~~ 1030 (1109)
.. .........+| ++.|+|||...+.. .....|+||.|+++.-+++|..||+.... ......|...... ...+.
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPW 255 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcc
Confidence 54 22333355678 99999999988854 46789999999999999999999986542 2233333333211 01111
Q ss_pred chhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1031 SELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
. .......++..+++..+|+.|.+.+++...-+...
T Consensus 256 ~---------------~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 256 N---------------SISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred c---------------cCChhhhhcccccccCCchhccccccccccccccc
Confidence 1 11123557788888899999999998876544433
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.46 E-value=9.7e-14 Score=169.06 Aligned_cols=115 Identities=37% Similarity=0.571 Sum_probs=64.7
Q ss_pred cceeeccCccccccccccccccchhhhhhccCCccccccccccccCccccceeecCCCccccCCchhhhccccceEEEcc
Q 001274 602 LTELQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGVIPYELGNLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLS 681 (1109)
Q Consensus 602 L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls 681 (1109)
++.|+|++|.+.|.+|..++++..|+ .|+|++|+|+|.+|..++.+++|+.|||++|+|+|.+|..++++++|++|+|+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~-~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQ-SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCC-EEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 34444555555555555555554443 35555555555555556666666666666666666666666666666666666
Q ss_pred CcccccccCCCc--ccccccCCcccCCCCcccc--CCCcc
Q 001274 682 NNNLVGTVPNTT--VFRRIDSSNFAGNRGLCML--GSDCH 717 (1109)
Q Consensus 682 ~N~l~g~~p~~~--~~~~~~~~~~~~n~~~c~~--~~~c~ 717 (1109)
+|+++|.+|..- .+.......+.||+.+|+. .+.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 666666666431 1112233457888888874 34553
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.41 E-value=4e-13 Score=156.99 Aligned_cols=259 Identities=33% Similarity=0.438 Sum_probs=181.2
Q ss_pred EEEeccccccCccchhhhcccccceeecCCccccCCCCCCCcccc-ccceeecccccccccCCccccCCcccceeccccc
Q 001274 412 VLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNIPPGLKTCR-SLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQN 490 (1109)
Q Consensus 412 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 490 (1109)
.++++.|.+.. ....+..++.++.|++.+|.++ .+++...... +|+.|++++|++. .+|..+.++++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 46666666532 2233445567778888888877 4455555553 7888888888888 45566788899999999999
Q ss_pred cccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCc
Q 001274 491 RFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPE 570 (1109)
Q Consensus 491 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 570 (1109)
+++.+ |...+.+++|+.|++++|+++ .+|.....+..|++|.+++|.+. ..+..+.++.++..|.+++|++. .++.
T Consensus 174 ~l~~l-~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLSDL-PKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhhhh-hhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 99854 555557888999999999998 46766666777999999999655 56777888999999999999987 4578
Q ss_pred ccccccccceecccccccccccCcccCCCcccceeeccCccccccccccccccchhhhhhccCCccccccccccccCccc
Q 001274 571 ELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGVIPYELGNLQM 650 (1109)
Q Consensus 571 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~ 650 (1109)
.+..+.+|++|++++|.++...+ ++.+.+++.|++++|.+....|.............+ +.++ ..+..+.....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~ 323 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIALLLLLLELLLN---LLLT-LKALELKLNSI 323 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhccchhHHhhhh---hhhh-ccccccccccc
Confidence 88889999999999999985544 888899999999999998777766554443322111 2222 23334444455
Q ss_pred cceeecCCCccccCCchhhhccccceEEEccCcc
Q 001274 651 LEALYLDDNQLIGEIPASMGEQMSLLVCNLSNNN 684 (1109)
Q Consensus 651 L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls~N~ 684 (1109)
+...++..|... ..|..+.....+..+++..+.
T Consensus 324 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 356 (394)
T COG4886 324 LLNNNILSNGET-SSPEALSILESLNNLWTLDNA 356 (394)
T ss_pred cccccccccccc-ccchhhcccccccCceecccc
Confidence 555566666655 555555555555555444443
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.40 E-value=1.4e-14 Score=160.36 Aligned_cols=172 Identities=30% Similarity=0.476 Sum_probs=86.2
Q ss_pred cCcEEEeccccccCccchhhhcccccceeecCCccccCCCCCCCccccccceeecccccccccCCccccCCcccceeccc
Q 001274 409 HLSVLDVSMNNLDGSIPPHLCMYQKLIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELY 488 (1109)
Q Consensus 409 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 488 (1109)
.-...||+.|++. .+|..++.+..|+.+.|.+|.+. .+|..++++..|..|+|+.|+++ ..
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~l---------------- 136 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HL---------------- 136 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cC----------------
Confidence 3344566666665 45555666666666666666555 34444444444444555554444 33
Q ss_pred cccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCC
Q 001274 489 QNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSA 568 (1109)
Q Consensus 489 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 568 (1109)
|..+..|+ |+.|-+++|+++ .+|..++.+.+|..||.+.|.+. .+|..++++.+|+.|++..|++. .+
T Consensus 137 --------p~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~l 204 (722)
T KOG0532|consen 137 --------PDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DL 204 (722)
T ss_pred --------ChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hC
Confidence 33344333 444555555544 34444444445555555555554 44444555555555555555544 34
Q ss_pred CcccccccccceecccccccccccCcccCCCcccceeeccCcccc
Q 001274 569 PEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFS 613 (1109)
Q Consensus 569 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 613 (1109)
|+++.. -.|..||+|.|++. .+|-.|..|..|++|-|.+|+|.
T Consensus 205 p~El~~-LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 205 PEELCS-LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred CHHHhC-CceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 444442 23444555555554 44555555555555555555554
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=1.2e-11 Score=143.96 Aligned_cols=146 Identities=18% Similarity=0.231 Sum_probs=101.9
Q ss_pred CCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcc--------------------------------------hh
Q 001274 803 NFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGAT--------------------------------------AD 844 (1109)
Q Consensus 803 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~--------------------------------------~~ 844 (1109)
.|. .+.||.|++|.||+|++++|+.||||+.+......- .+
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 444 368999999999999999999999999853210000 01
Q ss_pred HHHHHHHHHhccC----CCCceeeEEEEE-EeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHH-HHHH
Q 001274 845 NSFLAEISTLGKI----RHRNIVKLYGFC-YHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAE-GLCY 918 (1109)
Q Consensus 845 ~~~~~E~~~l~~l----~h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~~ 918 (1109)
-+|.+|++.+.++ +|..-+.+-.++ ......++||||++|+++.++....... . .+..++..+++ .+..
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~--~---~~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG--L---DRKALAENLARSFLNQ 272 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC--C---CHHHHHHHHHHHHHHH
Confidence 1355566665555 233333333333 2345679999999999998876532211 2 23456666665 4677
Q ss_pred HhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 919 LHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 919 LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
+| ..|++|+|+||.||+++.++.++++|||++....
T Consensus 273 l~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 273 VL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 88 7799999999999999999999999999997654
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.35 E-value=1e-12 Score=153.47 Aligned_cols=197 Identities=34% Similarity=0.500 Sum_probs=103.9
Q ss_pred eEEccCCcccccCCchhhccccceEEEcccccccccccccccCcC-CCceEEeecCCCCCCCCcccccccccceeccccc
Q 001274 124 ILDLCTNRLHGVIPFQLFFINTLRKLYLCENYIFGEIPEEIGNLT-SLEELVIYSNNLTGAIPASISKLRQLRVIRAGHN 202 (1109)
Q Consensus 124 ~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n 202 (1109)
.|+++.|.+.. ....+..++.++.|++.+|.++ .+|...+.++ +|++|++++|++. .+|..+.++++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 45666665532 2223334455666666666664 4555555553 6666666666665 44455556666666666666
Q ss_pred cccCCCCccccccccchhhhcccccccccCchhhhccccccceecccccccCCCCCCccccccccceeeeeccceecCch
Q 001274 203 SLSGPIPPEISECEGLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLPK 282 (1109)
Q Consensus 203 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 282 (1109)
+++ .+|...+.+++|+.|++++|+++ .+|..+..+..|++|.+++|++. .++..+.++..+..|.+.+|++. .++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 665 44444445555555555555555 34444444444555555555433 34444555555555555555554 2244
Q ss_pred hhhccCccceEEeecccccCccCcccCCCCcCcEEEccCCcccCCCc
Q 001274 283 ELGKLSRLKKLYVYTNELNGTIPHELGNCTSAVEIDLSENQLTGFIP 329 (1109)
Q Consensus 283 ~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p 329 (1109)
.++.++++++|++++|.++.. +. ++.+.+++.||+++|.+....|
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhccccccceecccccccccc-cc-ccccCccCEEeccCccccccch
Confidence 555555555555555555522 22 5555555555555555554433
No 463
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.23 E-value=9.3e-11 Score=119.46 Aligned_cols=138 Identities=13% Similarity=0.139 Sum_probs=99.5
Q ss_pred ceEecCCcceEEEEEecC-------CcEEEEEEeeccCCC----------c----------chhHHHH----HHHHHhcc
Q 001274 808 AVIGRGACGTVYKATLAN-------GEVIAVKKIKLRGEG----------A----------TADNSFL----AEISTLGK 856 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~~~----------~----------~~~~~~~----~E~~~l~~ 856 (1109)
..||.|.-+.||.|...+ +..+|||+++..... . ...+.+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 579999998653110 0 1122333 78889888
Q ss_pred CCC--CceeeEEEEEEeCCceEEEEEeccCCCHHH-HhccCCCCCCCChHHHHHHHHHHHHHHHHH-hhcCCCCeEecCC
Q 001274 857 IRH--RNIVKLYGFCYHQDSNLLLYEYMENGSLGE-QLHGNKQTCLLDWDARYRIALGAAEGLCYL-HYDCRPHIIHRDI 932 (1109)
Q Consensus 857 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dl 932 (1109)
+.. -++...+++ ...++||||+.++.+.. .++.. .++..+...+..+++.+|..+ | +.++||+|+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 843 355566654 56799999997654321 22211 144556677889999999999 7 679999999
Q ss_pred CCCceeeCCCCceEEeecccccccc
Q 001274 933 KSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 933 kp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
++.||+++ ++.++++|||.+...+
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999998665
No 464
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=8.3e-12 Score=129.88 Aligned_cols=205 Identities=23% Similarity=0.280 Sum_probs=140.4
Q ss_pred HHhccCCCCceeeEEEEEEeCC-----ceEEEEEeccCCCHHHHhccCCC-CCCCChHHHHHHHHHHHHHHHHHhhcCCC
Q 001274 852 STLGKIRHRNIVKLYGFCYHQD-----SNLLLYEYMENGSLGEQLHGNKQ-TCLLDWDARYRIALGAAEGLCYLHYDCRP 925 (1109)
Q Consensus 852 ~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 925 (1109)
..+-++.|.|||+++.|+.+.. ...++.|||..|++..+|++.+. ...+..+.-.+|+.||..||.|||+. .+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 3344557999999999987654 35789999999999999976432 23477778889999999999999976 89
Q ss_pred CeEecCCCCCceeeCCCCceEEeeccccccc---cCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHh
Q 001274 926 HIIHRDIKSNNILLDEEFQAHVGDFGLAKLI---DLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELIT 1002 (1109)
Q Consensus 926 ~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~ellt 1002 (1109)
.|+|+.+.-+-|++..+|-+|+.--.-.... ............+-++|.|||+=.....+.++|||+||....||.-
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999998888432111100 0000111122346789999998777778889999999999999988
Q ss_pred CCCCCCCcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 001274 1003 GKSPVQSLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMM 1077 (1109)
Q Consensus 1003 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L 1077 (1109)
+..--..........+-+...+... ..- .=..++.+|++..|..||+|++++.|.
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~~l---en~-----------------lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVIIGL---ENG-----------------LQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred heeccCCCcceeehhhhhhhheeec---cCc-----------------cccCcCcccccCCCCCCcchhhhhcCc
Confidence 7653111110011111111111110 000 012567889999999999999987653
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=1.7e-11 Score=139.73 Aligned_cols=251 Identities=23% Similarity=0.220 Sum_probs=183.4
Q ss_pred cCCCCCceEec--CCcceEEEEEe---cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCce
Q 001274 802 GNFSEGAVIGR--GACGTVYKATL---ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 802 ~~~~~~~~lG~--G~fg~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 875 (1109)
..|.....+|. |.+|.||.++. .++..+|+|+-+...........-.+|+...+++ .|++.++....+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 45667788999 99999999986 3688899998765555444555566788887777 599999988889999999
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHH----HHHHHhhcCCCCeEecCCCCCceeeCCC-CceEEeec
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAE----GLCYLHYDCRPHIIHRDIKSNNILLDEE-FQAHVGDF 950 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DF 950 (1109)
++-+|++ +.++.++.+..... ++.........+..+ |+.++| ..+++|-|+||.||+...+ ...+++||
T Consensus 194 fiqtE~~-~~sl~~~~~~~~~~--~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELC-GESLQSYCHTPCNF--LPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeeccc-cchhHHhhhccccc--CCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCc
Confidence 9999999 57888888765432 677777778888888 999999 7799999999999999999 89999999
Q ss_pred cccccccCCCCCCc----cccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhc
Q 001274 951 GLAKLIDLPYSKSM----SAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHE 1026 (1109)
Q Consensus 951 G~a~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 1026 (1109)
|+...+........ ....|...|++||... +-++.+.|+|++|.++.+-.++-.+.-.. ....|.. .+.
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g----~~~~W~~--~r~ 340 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVG----KNSSWSQ--LRQ 340 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCC----CCCCccc--ccc
Confidence 99887753321111 1225677899999654 46788999999999999999987764321 0011111 011
Q ss_pred cCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001274 1027 MVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAM 1076 (1109)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~ 1076 (1109)
..-..+..+. ....+...+..+++.+|..|++++.+..+
T Consensus 341 ~~ip~e~~~~-----------~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 341 GYIPLEFCEG-----------GSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ccCchhhhcC-----------cchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 1011111111 11123347778999999999999888654
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.21 E-value=3.1e-10 Score=133.33 Aligned_cols=147 Identities=15% Similarity=0.186 Sum_probs=98.1
Q ss_pred HhcCCCCCceEecCCcceEEEEEecC-CcEEEEEEeeccCCC----------------------------c----c----
Q 001274 800 ATGNFSEGAVIGRGACGTVYKATLAN-GEVIAVKKIKLRGEG----------------------------A----T---- 842 (1109)
Q Consensus 800 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------~----~---- 842 (1109)
....|.. +.||+|++|.||+|++++ |+.||||+.+..... . +
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3456776 789999999999999887 999999999633100 0 0
Q ss_pred --hhHHHHHHHHHhccCC----CCceeeEEEEEEe-CCceEEEEEeccCCCHHHH--hccCCC-CCCCChHHHHHHHHHH
Q 001274 843 --ADNSFLAEISTLGKIR----HRNIVKLYGFCYH-QDSNLLLYEYMENGSLGEQ--LHGNKQ-TCLLDWDARYRIALGA 912 (1109)
Q Consensus 843 --~~~~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~--l~~~~~-~~~l~~~~~~~i~~~i 912 (1109)
.+-++.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++ +...+. ...+....+..++.|+
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 0123555665555552 4444554444443 5677999999999999774 222221 0112222333333333
Q ss_pred HHHHHHHhhcCCCCeEecCCCCCceeeCCCC----ceEEeecccccccc
Q 001274 913 AEGLCYLHYDCRPHIIHRDIKSNNILLDEEF----QAHVGDFGLAKLID 957 (1109)
Q Consensus 913 ~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DFG~a~~~~ 957 (1109)
. ..|++|+|+||.||+++.++ .+++.|||++....
T Consensus 277 f----------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 F----------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred H----------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 3 45999999999999999888 99999999997654
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.19 E-value=4.6e-12 Score=129.69 Aligned_cols=134 Identities=26% Similarity=0.313 Sum_probs=96.7
Q ss_pred cccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCC
Q 001274 475 EFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNL 554 (1109)
Q Consensus 475 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 554 (1109)
....++-|+++|||+|.|+ .+.+...-++.++.|++|+|.|..+ ..+..+++|+.||||+|.++ .+..|-..+-++
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNI 354 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCE
Confidence 3444566778888888887 3455666677888888888888744 33777788888888888887 566677777788
Q ss_pred CeeecCCCcCccCCCcccccccccceecccccccccccC-cccCCCcccceeeccCccccc
Q 001274 555 QRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIP-SSLGGLARLTELQMGGNIFSG 614 (1109)
Q Consensus 555 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~ 614 (1109)
+.|.|++|.|. .-..++++-+|..||+++|+|..... ..+++||-|+.+.|.+|++.+
T Consensus 355 KtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 355 KTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eeeehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 88888888876 23467777778888888888774322 457777777777777777763
No 468
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.16 E-value=4.1e-10 Score=129.23 Aligned_cols=168 Identities=17% Similarity=0.211 Sum_probs=129.2
Q ss_pred EecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEeccCCCHHHHhccCCCCCCCC
Q 001274 822 TLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLD 901 (1109)
Q Consensus 822 ~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~ 901 (1109)
+..++.+|.|++.+.... .......+-++.++.+|||+|++++..+...+..|+|+|.+. -|..++.+. .
T Consensus 33 ~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------~ 102 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------G 102 (690)
T ss_pred eeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------H
Confidence 345788999998875543 344557788899999999999999999999999999999985 577777653 3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccccCCCCCCccccccccceeccccccC
Q 001274 902 WDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLIDLPYSKSMSAIAGSYGYIAPEYAYT 981 (1109)
Q Consensus 902 ~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 981 (1109)
...+...+.||+.||.|||+.| +++|++|..+.|+|+..|..||++|.++....... .......--..|..|+.+..
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~-~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFN-APAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCC-cccccchhhhcccChhhcCc
Confidence 5567778999999999999754 89999999999999999999999999886543111 11122222334667764432
Q ss_pred CCCCccchhHHHHHHHHHHHhCC
Q 001274 982 MKVTEKCDIYSFGVVLLELITGK 1004 (1109)
Q Consensus 982 ~~~~~~~DvwSlGvll~elltg~ 1004 (1109)
.. -..|.|-||+++||++.|.
T Consensus 180 s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCcc
Confidence 22 3469999999999999993
No 469
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.16 E-value=1.7e-12 Score=136.72 Aligned_cols=244 Identities=21% Similarity=0.250 Sum_probs=133.0
Q ss_pred ccccceEEEccccccccc----ccccccCcCCCceEEeec---CCCCCCCCcccc-------cccccceeccccccccCC
Q 001274 142 FINTLRKLYLCENYIFGE----IPEEIGNLTSLEELVIYS---NNLTGAIPASIS-------KLRQLRVIRAGHNSLSGP 207 (1109)
Q Consensus 142 ~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~---n~l~~~~p~~~~-------~l~~L~~L~l~~n~l~~~ 207 (1109)
.+..+++++|++|.|..+ +...+.+.++|++.++++ -++...+|..+. ..++|++|+||.|-+.-.
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 345555566666655433 334455566666666664 223334443322 224566666666655433
Q ss_pred CCcc----ccccccchhhhcccccccccCchhhhccccccceecccccccCCCCCCccccccccceeeeeccceecCc--
Q 001274 208 IPPE----ISECEGLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHENSFSGGLP-- 281 (1109)
Q Consensus 208 ~p~~----l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-- 281 (1109)
.+.. ++.+..|++|.|.+|.+.-.--..+++ -|.+|. .|+. .+.-+.|+++..++|++.....
T Consensus 108 g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen~ga~~ 176 (382)
T KOG1909|consen 108 GIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKK-------AASKPKLRVFICGRNRLENGGATA 176 (382)
T ss_pred chHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhc-------cCCCcceEEEEeeccccccccHHH
Confidence 3322 345667777777777765322222221 133322 2211 2233578888888888864433
Q ss_pred --hhhhccCccceEEeecccccC----ccCcccCCCCcCcEEEccCCcccCCC----cccccCCCCcceEecccccccCc
Q 001274 282 --KELGKLSRLKKLYVYTNELNG----TIPHELGNCTSAVEIDLSENQLTGFI----PRELGLIPNLCLLQLFENMLQGS 351 (1109)
Q Consensus 282 --~~l~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~Ls~n~l~~~~----p~~l~~l~~L~~L~L~~n~l~~~ 351 (1109)
..|...+.|+.+.++.|.|.. .+...+..+++|+.|||.+|.++... ...+..+++|+.|++.+|.+...
T Consensus 177 ~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~ 256 (382)
T KOG1909|consen 177 LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENE 256 (382)
T ss_pred HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccc
Confidence 345566888888888888852 12345778888888888888887322 33445556666666666666544
Q ss_pred cccccc-----CCCCccEEEcccCcccC----CCCcchhcccccceEEcccccc
Q 001274 352 IPRELG-----QLTQLHKLDLSINNLTG----TIPLEFQNLTYLVDLQLFDNHL 396 (1109)
Q Consensus 352 ~p~~l~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l 396 (1109)
-..+|. ..+.|+.|.+.+|.++. .+.......+.|..|+|++|.+
T Consensus 257 Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 257 GAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 333221 24556666666666642 1112233345555555555555
No 470
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.15 E-value=1.1e-10 Score=118.94 Aligned_cols=127 Identities=21% Similarity=0.209 Sum_probs=94.5
Q ss_pred ceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCcee-eEEEEEEeCCceEEEEEeccCCC
Q 001274 808 AVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIV-KLYGFCYHQDSNLLLYEYMENGS 886 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gs 886 (1109)
+.++.|.++.||+++.. ++.|++|....... ....+.+|+++++.+.+.+++ +++.+ .....++||||++|.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~ 77 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSE 77 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCc
Confidence 56899999999999875 77899998753221 223567899999888654444 44443 3344689999999988
Q ss_pred HHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCC-----eEecCCCCCceeeCCCCceEEeecccccc
Q 001274 887 LGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPH-----IIHRDIKSNNILLDEEFQAHVGDFGLAKL 955 (1109)
Q Consensus 887 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 955 (1109)
+... . . ....++.+++++++.|| ..+ ++|+|++|.||+++ ++.++++|||.+..
T Consensus 78 l~~~----~----~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 78 LLTE----D----F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc----c----c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 7543 0 1 11245678999999999 445 59999999999999 66899999998863
No 471
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.14 E-value=1.3e-11 Score=126.51 Aligned_cols=135 Identities=28% Similarity=0.335 Sum_probs=102.5
Q ss_pred CCccccccceeecccccccccCCccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccc
Q 001274 451 GLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHL 530 (1109)
Q Consensus 451 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 530 (1109)
.+...+-|+++||++|.|+ .+..+..-++.++.|++|+|.|..+ +.+..|++|+.||||+|.++. +..+-..+-++
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNI 354 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNI 354 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCE
Confidence 3344566777777777776 3455666678888888888888754 448888888999999988873 45566677888
Q ss_pred cEEecccCcccccCCcCCCCCCCCCeeecCCCcCccC-CCcccccccccceecccccccccc
Q 001274 531 VTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGS-APEELGQLVNLELLKLSDNKLTGA 591 (1109)
Q Consensus 531 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~ 591 (1109)
++|.|+.|.|... ..++.+-+|..||+++|+|... --..+++++.|+.+.|.+|.+.+.
T Consensus 355 KtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 355 KTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred eeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 8899999988732 4578888999999999998732 224688999999999999999854
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.13 E-value=8e-12 Score=146.05 Aligned_cols=245 Identities=29% Similarity=0.321 Sum_probs=137.7
Q ss_pred CCCccEEEcccCcccCCCCcchhcccccceEEcccccccccCCCcccccCcCcEEEeccccccCccchhhhcccccceee
Q 001274 359 LTQLHKLDLSINNLTGTIPLEFQNLTYLVDLQLFDNHLEGTIPPHIGVNSHLSVLDVSMNNLDGSIPPHLCMYQKLIFLS 438 (1109)
Q Consensus 359 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 438 (1109)
+..++.+.+..|.+. .+-..+..+++|+.|++.+|+|... ...+..+++|++|++++|.|+.+. .+..+..|+.|+
T Consensus 71 l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 334444445555554 2223345555566666666666532 222455666666666666665442 244455566666
Q ss_pred cCCccccCCCCCCCccccccceeecccccccccCC-ccccCCcccceeccccccccCCCCccccccccccEEEccCCccC
Q 001274 439 LGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLP-IEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFV 517 (1109)
Q Consensus 439 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 517 (1109)
+++|.|+.. ..+..+++|+.+++++|++..+-+ . ...+.+++.+++.+|.+..+ ..+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccce
Confidence 666666533 345556667777777777764444 2 35566677777777777633 34455555555677777666
Q ss_pred CCCChhhcccc--cccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecccccccccc---c
Q 001274 518 GYIPSEVGNLE--HLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLTGA---I 592 (1109)
Q Consensus 518 ~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~---~ 592 (1109)
..-+ +..+. +|+.+++++|.+. .++..+..+..+..|++++|++.. -..+.....+..+.+..|++... .
T Consensus 222 ~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (414)
T KOG0531|consen 222 KLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISN--LEGLERLPKLSELWLNDNKLALSEAIS 296 (414)
T ss_pred eccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhccccc--cccccccchHHHhccCcchhcchhhhh
Confidence 4322 22222 3677777777776 444556666777777777777652 22345555666666666665522 1
Q ss_pred Ccc-cCCCcccceeeccCcccccccc
Q 001274 593 PSS-LGGLARLTELQMGGNIFSGSIP 617 (1109)
Q Consensus 593 p~~-~~~l~~L~~L~l~~N~l~~~~p 617 (1109)
... ....+.++.+.+..|+.....+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 297 QEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccccccccccccccccccCccccccc
Confidence 111 3445566666666666654433
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.12 E-value=9.2e-12 Score=145.53 Aligned_cols=149 Identities=30% Similarity=0.353 Sum_probs=68.6
Q ss_pred cccceeecCCccccCCCCCCCccccccceeecccccccccCCccccCCcccceeccccccccCCCCccccccccccEEEc
Q 001274 432 QKLIFLSLGSNRLSGNIPPGLKTCRSLMQLMLGQNQLTGSLPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHL 511 (1109)
Q Consensus 432 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 511 (1109)
..++.+++..|.+.. +-..+..+++|+.|++.+|+|..+.. .+..+++|++|+|++|.|+.+ ..+..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccc--cchhhccchhhhee
Confidence 334444444444442 12223444455555555555543221 134455555555555555544 23444444555555
Q ss_pred cCCccCCCCChhhcccccccEEecccCcccccCCcC-CCCCCCCCeeecCCCcCccCCCcccccccccceecccccccc
Q 001274 512 SENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHE-LGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKLSDNKLT 589 (1109)
Q Consensus 512 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 589 (1109)
++|.|+.+ ..+..++.|+.+++++|++...-+ . ...+.+|+.+++.+|.+. ....+..+..+..+++..|+++
T Consensus 148 ~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 148 SGNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred ccCcchhc--cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchh--cccchHHHHHHHHhhcccccce
Confidence 55555532 233445555555555555552222 1 344555555555555554 2233334444444455555554
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.07 E-value=9.2e-11 Score=117.07 Aligned_cols=105 Identities=27% Similarity=0.320 Sum_probs=25.5
Q ss_pred cccceeecccccccccCCcccc-CCcccceeccccccccCCCCccccccccccEEEccCCccCCCCChhh-cccccccEE
Q 001274 456 RSLMQLMLGQNQLTGSLPIEFY-NLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEV-GNLEHLVTF 533 (1109)
Q Consensus 456 ~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L 533 (1109)
.++++|+|++|+|+.+- .++ .+.+|+.|+|++|.|+.+ +.+..+++|++|++++|+|+.+ ...+ ..+++|+.|
T Consensus 19 ~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 19 VKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQEL 93 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--EE
T ss_pred ccccccccccccccccc--chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhCCcCCEE
Confidence 34455555555555321 222 345555555666555543 2355555566666666665532 2222 345555666
Q ss_pred ecccCcccccCC-cCCCCCCCCCeeecCCCcCc
Q 001274 534 NISSNSLSGTIP-HELGNCVNLQRLDLSRNQFT 565 (1109)
Q Consensus 534 ~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 565 (1109)
+|++|+|...-- ..+..+++|+.|+|.+|.++
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 666665542110 22344555555555555554
No 475
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.06 E-value=6.7e-12 Score=132.29 Aligned_cols=217 Identities=26% Similarity=0.282 Sum_probs=99.5
Q ss_pred eEEEEeccCcccc----ccccccccCccccceeecccCccCC----CCCc-------cccCCCCCceEEccCCcccccCC
Q 001274 73 KVTSVDLHGLNLS----GILSPRICDLPRLVEFNISMNFVTG----SIPT-------DLANCSSLEILDLCTNRLHGVIP 137 (1109)
Q Consensus 73 ~v~~l~l~~~~l~----g~~~~~~~~l~~L~~L~ls~n~~~~----~~p~-------~l~~l~~L~~L~Ls~n~l~~~~~ 137 (1109)
.++.|+|+||.+. ..+.+.|.+.++|+.-++|+ .++| .+|+ .+..+++|++||||.|.|....+
T Consensus 31 s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 31 SLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred ceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 4667777776553 22345555666666666664 2233 2333 34445566666666666655444
Q ss_pred chhh----ccccceEEEcccccccccccccccCcCCCceEEeecCCCCCCCCcccccccccceeccccccccCCCC----
Q 001274 138 FQLF----FINTLRKLYLCENYIFGEIPEEIGNLTSLEELVIYSNNLTGAIPASISKLRQLRVIRAGHNSLSGPIP---- 209 (1109)
Q Consensus 138 ~~l~----~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p---- 209 (1109)
..|. .+..|++|+|.+|.+.-.-...++. .|.+|. .|+ -++.-.+||++..++|++.....
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga~~~A 178 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGGATALA 178 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccccHHHHH
Confidence 4332 2445555555555543211111111 111111 110 11222455555555555542221
Q ss_pred ccccccccchhhhccccccccc----CchhhhccccccceecccccccCC----CCCCccccccccceeeeeccceecCc
Q 001274 210 PEISECEGLEVLGLAQNSLEGF----LPSELEKLRNLTDLILWQNHLSGE----IPPTIGNIQSLELLALHENSFSGGLP 281 (1109)
Q Consensus 210 ~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p 281 (1109)
..|...+.|+.+.++.|.|... +...+..+++|+.|||.+|-++.. +...+..+++|+.|++++|.++....
T Consensus 179 ~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga 258 (382)
T KOG1909|consen 179 EAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGA 258 (382)
T ss_pred HHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccH
Confidence 2233445555555555555321 123344555555666655555522 22334444555555555555554333
Q ss_pred hhhh-----ccCccceEEeeccccc
Q 001274 282 KELG-----KLSRLKKLYVYTNELN 301 (1109)
Q Consensus 282 ~~l~-----~l~~L~~L~l~~n~l~ 301 (1109)
.+|. ..++|+.|.|.+|.++
T Consensus 259 ~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 259 IAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred HHHHHHHhccCCCCceeccCcchhH
Confidence 3322 2345555555555554
No 476
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=1.1e-10 Score=133.27 Aligned_cols=252 Identities=20% Similarity=0.183 Sum_probs=178.3
Q ss_pred HHhcCCCCCceEecCCcceEEEEEe--cCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEEEeCCce
Q 001274 799 EATGNFSEGAVIGRGACGTVYKATL--ANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFCYHQDSN 875 (1109)
Q Consensus 799 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 875 (1109)
....+|..+..||.|.|+.|+.... .++..|++|.....-........-..|+.+...+ .|.++++....+...+..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3456889999999999999999863 4688899998875544433444445666666666 588888887777777778
Q ss_pred EEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCC-CceEEeeccccc
Q 001274 876 LLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEE-FQAHVGDFGLAK 954 (1109)
Q Consensus 876 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~ 954 (1109)
|+=-|||++++......... .+++..++++..|++.++.++| ++.++|+|+||+||++..+ +..++.|||.+.
T Consensus 342 ~ip~e~~~~~s~~l~~~~~~---~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTSQ---MLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred cCchhhhcCcchhhhhHHHH---hcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccc
Confidence 89999999999877763222 3788889999999999999999 8899999999999999886 788999999987
Q ss_pred cccCCCCCCcccccccccee--ccccccCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCcHHHHHHHhhhccCCCch
Q 001274 955 LIDLPYSKSMSAIAGSYGYI--APEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQSLELGGDLVTWVRRSIHEMVPTSE 1032 (1109)
Q Consensus 955 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1109)
.+.. ........-++. +|+......+..++|++|||.-+.|.++|..--+... .|.. ...+..+.
T Consensus 416 ~~~~----~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~------~~~~-i~~~~~p~-- 482 (524)
T KOG0601|consen 416 RLAF----SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV------QSLT-IRSGDTPN-- 482 (524)
T ss_pred ccce----ecccccccccccccchhhccccccccccccccccccccccccCcccCcccc------ccee-eecccccC--
Confidence 4321 111112222333 5555556678899999999999999999875422111 1111 00111110
Q ss_pred hhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 001274 1033 LFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMREVIAMMIDAR 1081 (1109)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~ 1081 (1109)
.......+..+...+...++..||.+.+...+.....
T Consensus 483 ------------~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 483 ------------LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred ------------CCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 1111134566777788999999999998877665543
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=7.6e-11 Score=117.66 Aligned_cols=126 Identities=32% Similarity=0.387 Sum_probs=40.1
Q ss_pred ccCCcccceeccccccccCCCCcccc-ccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCC-CCCCC
Q 001274 476 FYNLQNLSALELYQNRFSGLIPPEIG-KLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHEL-GNCVN 553 (1109)
Q Consensus 476 ~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~ 553 (1109)
+.+..++++|+|++|.|+.+ +.++ .+.+|+.|+|++|.|+.+ ..+..+++|++|++++|+|+. +...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 44555677888888888754 3455 467777788888877754 246667777777777777773 33333 35677
Q ss_pred CCeeecCCCcCccCC-CcccccccccceecccccccccccC---cccCCCcccceee
Q 001274 554 LQRLDLSRNQFTGSA-PEELGQLVNLELLKLSDNKLTGAIP---SSLGGLARLTELQ 606 (1109)
Q Consensus 554 L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~ 606 (1109)
|+.|+|++|+|...- -..+..+++|+.|+|.+|+++...- ..+..+|+|+.||
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 777777777776321 1345566677777777777663211 1344556666655
No 478
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=5.6e-11 Score=128.62 Aligned_cols=214 Identities=22% Similarity=0.199 Sum_probs=111.2
Q ss_pred cCCCCCceEEccCCcccccCC-chhhccccceEEEccccccccc--ccccccCcCCCceEEeecCCCCCCCCccc-cccc
Q 001274 117 ANCSSLEILDLCTNRLHGVIP-FQLFFINTLRKLYLCENYIFGE--IPEEIGNLTSLEELVIYSNNLTGAIPASI-SKLR 192 (1109)
Q Consensus 117 ~~l~~L~~L~Ls~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~--~p~~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~ 192 (1109)
.++++|+...|.+..+....- .....+++++.|||+.|-+..- +-.-...|++|+.|.|+.|++........ .-++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 567778888888877763322 2455678888888888877642 23345667788888888887763222221 3456
Q ss_pred ccceeccccccccCCCC-ccccccccchhhhcccccccccCchhhhccccccceecccccccCCCC--CCccccccccce
Q 001274 193 QLRVIRAGHNSLSGPIP-PEISECEGLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIP--PTIGNIQSLELL 269 (1109)
Q Consensus 193 ~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p--~~l~~l~~L~~L 269 (1109)
+|+.|.|+.|.++..-- ..+..+++|+.|+|..|.....-......+..|+.|||++|.+- ..+ ...+.++.|+.|
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhh
Confidence 66666666666653211 11234556666666666422222223334445555555555544 222 234444555555
Q ss_pred eeeeccceec-CchhhhccCccceEEeecccccCccCcccCCCCcCcEEEccCCcccCCC-cccccCCCCcceEeccccc
Q 001274 270 ALHENSFSGG-LPKELGKLSRLKKLYVYTNELNGTIPHELGNCTSAVEIDLSENQLTGFI-PRELGLIPNLCLLQLFENM 347 (1109)
Q Consensus 270 ~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~L~~n~ 347 (1109)
+++.+.+... .|+. ..-.-....++|++|+++.|++...- -..+..+++|+.|.+..|.
T Consensus 277 nls~tgi~si~~~d~-------------------~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ 337 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDV-------------------ESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNY 337 (505)
T ss_pred hccccCcchhcCCCc-------------------cchhhhcccccceeeecccCccccccccchhhccchhhhhhccccc
Confidence 5555544321 1111 00000233455666666666653211 1233445566666666666
Q ss_pred ccC
Q 001274 348 LQG 350 (1109)
Q Consensus 348 l~~ 350 (1109)
+..
T Consensus 338 ln~ 340 (505)
T KOG3207|consen 338 LNK 340 (505)
T ss_pred ccc
Confidence 553
No 479
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=8.3e-11 Score=127.34 Aligned_cols=206 Identities=25% Similarity=0.269 Sum_probs=94.4
Q ss_pred ccccceEEcccccccccCC--CcccccCcCcEEEeccccccCccc--hhhhcccccceeecCCccccCCCCCCC-ccccc
Q 001274 383 LTYLVDLQLFDNHLEGTIP--PHIGVNSHLSVLDVSMNNLDGSIP--PHLCMYQKLIFLSLGSNRLSGNIPPGL-KTCRS 457 (1109)
Q Consensus 383 l~~L~~L~L~~N~l~~~~p--~~~~~~~~L~~L~Ls~N~l~~~~~--~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~ 457 (1109)
+.+|++..|.+.... ..+ .....+++++.||||.|-+....+ .....+++|+.|+|+.|++.--..... ..++.
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 344444444444443 111 133345555555555555543222 233456666666666666652221111 13445
Q ss_pred cceeeccccccccc-CCccccCCcccceeccccccccCCCCccccccccccEEEccCCccCCCC-ChhhcccccccEEec
Q 001274 458 LMQLMLGQNQLTGS-LPIEFYNLQNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYI-PSEVGNLEHLVTFNI 535 (1109)
Q Consensus 458 L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L 535 (1109)
|+.|.|+.|.++-. +......+++|+.|+|.+|....+.......+..|++|||++|++.... -...+.++.|+.|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 55566666555411 1112334556666666666432232333344555666666666554321 023445555555666
Q ss_pred ccCccccc-CCcC-----CCCCCCCCeeecCCCcCccC-CCcccccccccceecccccccc
Q 001274 536 SSNSLSGT-IPHE-----LGNCVNLQRLDLSRNQFTGS-APEELGQLVNLELLKLSDNKLT 589 (1109)
Q Consensus 536 s~N~l~~~-~p~~-----~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~ 589 (1109)
+.+.+..+ .|+. ...+++|++|+++.|+|... .-..+..+++|+.|....|.++
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 66555532 1222 23455566666666665411 1112333444444444444444
No 480
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=2.6e-09 Score=104.34 Aligned_cols=134 Identities=23% Similarity=0.296 Sum_probs=100.8
Q ss_pred ceEecCCcceEEEEEecCCcEEEEEEeeccCCCcch------hHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEEEe
Q 001274 808 AVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATA------DNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEY 881 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 881 (1109)
..+++|+-+.||.+.+. |.++++|.-..+...... .+.-.+|+.++.+++--.|..-+-+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999875 455777765444332222 23456799999888655555555556677888999999
Q ss_pred ccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 882 MENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 882 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
++|..|.+++... ...++..+-.-+.-|| ..+|+|+|+.++||.+..+. +.++|||++...
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999998888654 1345556666677899 88999999999999998875 999999999853
No 481
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.00 E-value=2.4e-10 Score=142.01 Aligned_cols=290 Identities=22% Similarity=0.261 Sum_probs=178.2
Q ss_pred CccccceeecccCccCCCCCccccCCCCCceEEccCCc--ccccCCch-hhccccceEEEcccccccccccccccCcCCC
Q 001274 94 DLPRLVEFNISMNFVTGSIPTDLANCSSLEILDLCTNR--LHGVIPFQ-LFFINTLRKLYLCENYIFGEIPEEIGNLTSL 170 (1109)
Q Consensus 94 ~l~~L~~L~ls~n~~~~~~p~~l~~l~~L~~L~Ls~n~--l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 170 (1109)
+...++...+-+|.+.- ++.. ..+++|+.|-+..|. +. .++.. |..++.|+.|||++|.--+++|.+|++|-+|
T Consensus 521 ~~~~~rr~s~~~~~~~~-~~~~-~~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIEH-IAGS-SENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred chhheeEEEEeccchhh-ccCC-CCCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 34566666666666542 2222 234478888888886 44 44444 6668999999999888878899999999999
Q ss_pred ceEEeecCCCCCCCCcccccccccceeccccccccCCCCccccccccchhhhcccccc--cccCchhhhccccccceecc
Q 001274 171 EELVIYSNNLTGAIPASISKLRQLRVIRAGHNSLSGPIPPEISECEGLEVLGLAQNSL--EGFLPSELEKLRNLTDLILW 248 (1109)
Q Consensus 171 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l--~~~~p~~l~~l~~L~~L~L~ 248 (1109)
++|+|+++.+. .+|..+++|++|.+|++..+.-...+|..+..+.+|++|.+..-.. +...-..+.+|.+|+.|...
T Consensus 598 ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 598 RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred hcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 99999999988 8899999999999999998876656677777789999988877652 22333344455555555543
Q ss_pred cccccCCCCCCcccccccc----ceeeeeccceecCchhhhccCccceEEeecccccCccCcccCCCC------cCcEEE
Q 001274 249 QNHLSGEIPPTIGNIQSLE----LLALHENSFSGGLPKELGKLSRLKKLYVYTNELNGTIPHELGNCT------SAVEID 318 (1109)
Q Consensus 249 ~N~l~~~~p~~l~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~------~L~~L~ 318 (1109)
.... .+-..+..+..|. .+.+..+... ..+..++.+.+|+.|.+.++.+............ ++..+.
T Consensus 677 ~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~ 753 (889)
T KOG4658|consen 677 ISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVS 753 (889)
T ss_pred cchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHH
Confidence 3322 1111222233333 3333333332 4556778888888888888887643332221111 222222
Q ss_pred ccCCcccCCCcccccCCCCcceEecccccccCcccccccCCCCccEEEcccCcccCC-CCcchhcccccceEEc
Q 001274 319 LSENQLTGFIPRELGLIPNLCLLQLFENMLQGSIPRELGQLTQLHKLDLSINNLTGT-IPLEFQNLTYLVDLQL 391 (1109)
Q Consensus 319 Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L 391 (1109)
..++..- ..+.+....++|+.|++..+.....+......+..+..+-+..+.+.+. .-.....++++..+.+
T Consensus 754 ~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 754 ILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPL 826 (889)
T ss_pred hhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEeccc
Confidence 2222211 1233444667888888887776666666666666666666666666654 2344445555544433
No 482
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.00 E-value=4.3e-09 Score=101.92 Aligned_cols=146 Identities=20% Similarity=0.219 Sum_probs=109.7
Q ss_pred CCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcc------hhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEEE
Q 001274 806 EGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGAT------ADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLLY 879 (1109)
Q Consensus 806 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 879 (1109)
....+-+|+-+.|+++.+. |+.+.||.-..+..... ..+...+|++.+.+++--.|..-.-++.+.....++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4568899999999999986 78888886654433221 2346778999998887556655555677777889999
Q ss_pred EeccC-CCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCC---ceEEeecccccc
Q 001274 880 EYMEN-GSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEF---QAHVGDFGLAKL 955 (1109)
Q Consensus 880 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~~ 955 (1109)
||++| .++.+++....... ........++..|-+.+.-|| ..+|+|+||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 47888887654331 222233678889999999999 88999999999999996554 468999999975
Q ss_pred c
Q 001274 956 I 956 (1109)
Q Consensus 956 ~ 956 (1109)
.
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 3
No 483
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=6.6e-10 Score=138.15 Aligned_cols=86 Identities=31% Similarity=0.376 Sum_probs=43.0
Q ss_pred cccccccceeccccccccCCCCccccccccchhhhcccccccccCchhhhccccccceecccccccCCCCCCcccccccc
Q 001274 188 ISKLRQLRVIRAGHNSLSGPIPPEISECEGLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLE 267 (1109)
Q Consensus 188 ~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 267 (1109)
|..++.|++|||++|.=-+.+|.+++++-+|++|+|++..+. .+|..+.+|+.|.+|++..+.-...+|..+..+++|+
T Consensus 567 f~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr 645 (889)
T KOG4658|consen 567 FRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLR 645 (889)
T ss_pred HhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhccccc
Confidence 344455555555544433445555555555555555555554 4555555555555555555543333444444455555
Q ss_pred ceeeeec
Q 001274 268 LLALHEN 274 (1109)
Q Consensus 268 ~L~L~~N 274 (1109)
+|.+..-
T Consensus 646 ~L~l~~s 652 (889)
T KOG4658|consen 646 VLRLPRS 652 (889)
T ss_pred EEEeecc
Confidence 5555443
No 484
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.96 E-value=5.8e-10 Score=83.63 Aligned_cols=40 Identities=50% Similarity=0.977 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHhcC-CCCCCCCCCCCCC-CCCCccceeeec
Q 001274 31 TEEGVSLLEFKASLI-DPSNNLESWNSSD-MTPCNWIGVECT 70 (1109)
Q Consensus 31 ~~~~~all~~k~~~~-~~~~~~~~W~~~~-~~~c~w~gv~C~ 70 (1109)
.+|++||++||+++. ||.+.+++|+.+. .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 568999999999998 6778999999763 699999999996
No 485
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.94 E-value=5.5e-09 Score=111.62 Aligned_cols=143 Identities=20% Similarity=0.284 Sum_probs=109.9
Q ss_pred ceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCC--ceeeEEEEEEeCC---ceEEEEEec
Q 001274 808 AVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHR--NIVKLYGFCYHQD---SNLLLYEYM 882 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~e~~ 882 (1109)
+.++.|.++.||+++..+|+.+++|........ .....+.+|+++++.+++. .+.+++.+....+ ..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999999876789999987533221 1345688999999999653 4566777765532 568999999
Q ss_pred cCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhc----------------------------------------
Q 001274 883 ENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYD---------------------------------------- 922 (1109)
Q Consensus 883 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------------------------------------- 922 (1109)
+|.++.+.+.. . .++..+...++.++++++.+||+.
T Consensus 83 ~G~~l~~~~~~-~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 83 DGRVLRDRLLR-P---ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CCEecCCCCCC-C---CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99888776532 1 267778888888999999998842
Q ss_pred -------------CCCCeEecCCCCCceeeCC--CCceEEeecccccc
Q 001274 923 -------------CRPHIIHRDIKSNNILLDE--EFQAHVGDFGLAKL 955 (1109)
Q Consensus 923 -------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~~ 955 (1109)
....++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 0256899999999999998 67789999998874
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.83 E-value=1.3e-09 Score=130.22 Aligned_cols=250 Identities=20% Similarity=0.225 Sum_probs=167.5
Q ss_pred hcCCCCCceEecCCcceEEEEEec-CCcEEEEEEeeccCCC-cchhHHHHHHHHHhccCCCCceeeEEEEEEeCCceEEE
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLA-NGEVIAVKKIKLRGEG-ATADNSFLAEISTLGKIRHRNIVKLYGFCYHQDSNLLL 878 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 878 (1109)
.+.+.+.+-+-.|.++.++.++-. .|...++|+......- ....+....+-.+.-..++|-+++..--+......++|
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 356677778889999999988633 3444444444322111 11122233333333334567666655555566778999
Q ss_pred EEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc-
Q 001274 879 YEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID- 957 (1109)
Q Consensus 879 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~- 957 (1109)
++|..++++..-++..+. .+.+..+.....+..+.+||| ...++|||++|.|.+...++..+++|||......
T Consensus 883 ~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999887663 455555666677888999999 6679999999999999999999999998332110
Q ss_pred --------------------CCCC---------CCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001274 958 --------------------LPYS---------KSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSPVQ 1008 (1109)
Q Consensus 958 --------------------~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~pf~ 1008 (1109)
+... .......+|+.|.+||...+......+|.|+.|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0000 11233568999999999999999999999999999999999999998
Q ss_pred CcccCCcHHHHHHHhhhccCCCchhhhhhcchhhcccHHHHHHHHHHHHhccCCCCCCCCCHH
Q 001274 1009 SLELGGDLVTWVRRSIHEMVPTSELFDKRLDLSAKRTVEEMTLFLKIALFCSSTSPLNRPTMR 1071 (1109)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~ 1071 (1109)
+......+ +.......+.... ..+......+++.+.+..+|.+|-.|.
T Consensus 1037 a~tpq~~f----~ni~~~~~~~p~g-----------~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQIF----ENILNRDIPWPEG-----------PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchhhhh----hccccCCCCCCCC-----------ccccChhhhhhhhhhhccCchhccCcc
Confidence 65432222 2222222111111 122223456777788888999997776
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.80 E-value=4.4e-08 Score=99.68 Aligned_cols=128 Identities=24% Similarity=0.319 Sum_probs=83.5
Q ss_pred eEEEEEecCCcEEEEEEeeccCCC-----------cc-------------hhHHHHHHHHHhccCCCC--ceeeEEEEEE
Q 001274 817 TVYKATLANGEVIAVKKIKLRGEG-----------AT-------------ADNSFLAEISTLGKIRHR--NIVKLYGFCY 870 (1109)
Q Consensus 817 ~Vy~~~~~~~~~vavK~~~~~~~~-----------~~-------------~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 870 (1109)
.||.|...+|..+|||..+..... .. ......+|++.|.++..- ++.+.+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 489999988999999998653110 00 013466899999999755 45566544
Q ss_pred eCCceEEEEEecc--CCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHH-HhhcCCCCeEecCCCCCceeeCCCCceEE
Q 001274 871 HQDSNLLLYEYME--NGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCY-LHYDCRPHIIHRDIKSNNILLDEEFQAHV 947 (1109)
Q Consensus 871 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 947 (1109)
...++||||++ |..+..+... . ++......++.+++..+.. +| ..|+||+|+.+.||+++++ .+.|
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~-~----~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDV-D----LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHC-G----GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE
T ss_pred --eCCEEEEEecCCCccchhhHHhc-c----ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEE
Confidence 35689999998 5444433222 1 1234556677788875555 57 7799999999999999988 9999
Q ss_pred eecccccccc
Q 001274 948 GDFGLAKLID 957 (1109)
Q Consensus 948 ~DFG~a~~~~ 957 (1109)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999987654
No 488
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.77 E-value=2.1e-07 Score=100.88 Aligned_cols=271 Identities=14% Similarity=0.146 Sum_probs=160.9
Q ss_pred CCceEecCCcceEEEEEecCCcEEEEEEeeccCCCcchhHHHHHHHHHhccC-CCCceeeEEEEE------EeCC-ceEE
Q 001274 806 EGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEGATADNSFLAEISTLGKI-RHRNIVKLYGFC------YHQD-SNLL 877 (1109)
Q Consensus 806 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~------~~~~-~~~l 877 (1109)
.++.||+|+.+.+|-.--- +.. +.|++...... ... +.+..|... .||-+-.-+.|= -+.. ...+
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa--~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPA--AQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCccccCCccceeeecchh-hch-hheeecCCCch--HHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 4568999999999965321 112 44666533211 111 223333333 566433212211 1111 2457
Q ss_pred EEEeccCCC-HHHHhcc---CCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeecccc
Q 001274 878 LYEYMENGS-LGEQLHG---NKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLA 953 (1109)
Q Consensus 878 v~e~~~~gs-L~~~l~~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 953 (1109)
.|..+++.- ...+... ...-....|.-..+++..++.+.+.|| ..|.+-+|+.++|+||.+++.+++.|-..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccce
Confidence 777776542 2222211 111124789999999999999999999 779999999999999999999999986544
Q ss_pred ccccCCCCCCccccccccceecccccc-----CCCCCccchhHHHHHHHHHHHhC-CCCCCCcccC----CcHH-HHHHH
Q 001274 954 KLIDLPYSKSMSAIAGSYGYIAPEYAY-----TMKVTEKCDIYSFGVVLLELITG-KSPVQSLELG----GDLV-TWVRR 1022 (1109)
Q Consensus 954 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvll~elltg-~~pf~~~~~~----~~~~-~~~~~ 1022 (1109)
.... ........+|...|++||.-. +..-+...|-|.+||++++++.| ++||.+.... .... +....
T Consensus 165 qi~~--ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 165 QINA--NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eecc--CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 3322 233345567889999999644 33456789999999999999885 9999875411 1111 11111
Q ss_pred hhhccCCCc-hhhhhhcchhhcccHHHHHHHHHHHHhccCCC--CCCCCCHHHHHHHHHHhhhccCCCCCCC
Q 001274 1023 SIHEMVPTS-ELFDKRLDLSAKRTVEEMTLFLKIALFCSSTS--PLNRPTMREVIAMMIDARQSVSDYPSSP 1091 (1109)
Q Consensus 1023 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d--P~~RPt~~evl~~L~~~~~~~~~~~~~~ 1091 (1109)
.+....... .............. ...+..+..+|+... +.-|||++..+..|..+.++......+.
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~L---pp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a 311 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSML---PPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSA 311 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhc---CHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhcc
Confidence 111110000 00000000001111 123556667777654 6789999999999988877765554443
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=8.9e-09 Score=84.52 Aligned_cols=59 Identities=41% Similarity=0.564 Sum_probs=26.3
Q ss_pred cccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCc
Q 001274 505 NLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQ 563 (1109)
Q Consensus 505 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 563 (1109)
+|++|++++|+|+.+.+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444444444444444444444444444444444444443
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.70 E-value=6.1e-08 Score=100.52 Aligned_cols=139 Identities=25% Similarity=0.241 Sum_probs=98.1
Q ss_pred CCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCC--------------------cchhHHHHHHHHHhccCCCC--c
Q 001274 804 FSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEG--------------------ATADNSFLAEISTLGKIRHR--N 861 (1109)
Q Consensus 804 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------------------~~~~~~~~~E~~~l~~l~h~--n 861 (1109)
..++.+||.|.-|.||.|..+.|.++|||.-+..... ........+|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4466899999999999999999999999965322100 11123566889999988644 5
Q ss_pred eeeEEEEEEeCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC
Q 001274 862 IVKLYGFCYHQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE 941 (1109)
Q Consensus 862 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~ 941 (1109)
+.+.+++ +.+.+||||++|--|...- ++......++..|++-+...- ..||||+|+.+-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEec
Confidence 6665554 5678999999885554322 122233344444554444444 458999999999999999
Q ss_pred CCceEEeecccccccc
Q 001274 942 EFQAHVGDFGLAKLID 957 (1109)
Q Consensus 942 ~~~~kl~DFG~a~~~~ 957 (1109)
||.++++||-.+....
T Consensus 238 dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 238 DGDIVVIDWPQAVPIS 253 (304)
T ss_pred CCCEEEEeCcccccCC
Confidence 9999999998877544
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.69 E-value=1e-08 Score=84.11 Aligned_cols=59 Identities=34% Similarity=0.546 Sum_probs=30.0
Q ss_pred ccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCc
Q 001274 481 NLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNS 539 (1109)
Q Consensus 481 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 539 (1109)
+|++|++++|+|+.+.+..|.++++|++|++++|+++.+.|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34455555555554444455555555555555555554444455555555555555554
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.65 E-value=1.1e-09 Score=124.91 Aligned_cols=127 Identities=30% Similarity=0.385 Sum_probs=99.5
Q ss_pred cccceeccccccccCCCCccccccccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcC-CCCCCCCCeee
Q 001274 480 QNLSALELYQNRFSGLIPPEIGKLRNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHE-LGNCVNLQRLD 558 (1109)
Q Consensus 480 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ 558 (1109)
..|.+.+.++|++. .....+.-++.|+.|+|++|+++.. +.+..+++|++|||++|.+. .+|.. ...+ .|+.|.
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeee
Confidence 46778888899987 4466788888999999999999865 47888999999999999998 55542 2333 499999
Q ss_pred cCCCcCccCCCcccccccccceecccccccccccC-cccCCCcccceeeccCcccc
Q 001274 559 LSRNQFTGSAPEELGQLVNLELLKLSDNKLTGAIP-SSLGGLARLTELQMGGNIFS 613 (1109)
Q Consensus 559 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~ 613 (1109)
|++|.++. -..+.+|++|+.|||++|-|.+--. .-++.|..|+.|+|.||++-
T Consensus 239 lrnN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 239 LRNNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ecccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99999873 2457888999999999998875422 23456778899999999886
No 493
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.64 E-value=3.5e-07 Score=98.97 Aligned_cols=143 Identities=16% Similarity=0.092 Sum_probs=98.8
Q ss_pred ceEecCCcceEEEEEecCCcEEEEEEeeccCCCc---------chhHHHHHHHHHhccCCCCc--eeeEEEEEEe-----
Q 001274 808 AVIGRGACGTVYKATLANGEVIAVKKIKLRGEGA---------TADNSFLAEISTLGKIRHRN--IVKLYGFCYH----- 871 (1109)
Q Consensus 808 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~----- 871 (1109)
+.+-+.....|+++.. +|+.|.||......... .....+.+|...+.++...+ ....+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444455777766 47889999774322110 01114778888887774322 2344444432
Q ss_pred CCceEEEEEeccCC-CHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCC-------CC
Q 001274 872 QDSNLLLYEYMENG-SLGEQLHGNKQTCLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDE-------EF 943 (1109)
Q Consensus 872 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-------~~ 943 (1109)
....++|||++++. +|.+++..... ...+...+..++.+++..+.-|| ..||+|+|++++|||++. ++
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCc
Confidence 23468999999886 89888853211 12456677889999999999999 889999999999999975 46
Q ss_pred ceEEeecccccc
Q 001274 944 QAHVGDFGLAKL 955 (1109)
Q Consensus 944 ~~kl~DFG~a~~ 955 (1109)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 899999998863
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.53 E-value=3.4e-09 Score=121.08 Aligned_cols=181 Identities=28% Similarity=0.295 Sum_probs=127.9
Q ss_pred CccccccccccEEEccCCccCCCCChhhccc-ccccEEecccCcccc---cCCcC---CCC---CCCCCeeecCCCcCcc
Q 001274 497 PPEIGKLRNLERLHLSENYFVGYIPSEVGNL-EHLVTFNISSNSLSG---TIPHE---LGN---CVNLQRLDLSRNQFTG 566 (1109)
Q Consensus 497 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~---~~p~~---~~~---l~~L~~L~Ls~N~l~~ 566 (1109)
|-.+....+|+.|.|.++.|... ..+..+ .+|++|. .+|.+.. ++... +.+ ...|...+.++|+++
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LI-C~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLI-CHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhh-hhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 44567788999999999988641 122222 2344443 3343321 11111 111 236778889999998
Q ss_pred CCCcccccccccceecccccccccccCcccCCCcccceeeccCccccccccc-cccccchhhhhhccCCccccccccccc
Q 001274 567 SAPEELGQLVNLELLKLSDNKLTGAIPSSLGGLARLTELQMGGNIFSGSIPV-ALGQLTALQIALNISHNNLSGVIPYEL 645 (1109)
Q Consensus 567 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~l~~~L~Ls~N~l~~~~p~~~ 645 (1109)
.+.+++.-++.|+.|||++|+++... .+..++.|++|||+.|.+. .+|. ....+. |+ .|++++|.++... .+
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~-~L~lrnN~l~tL~--gi 250 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQ-LLNLRNNALTTLR--GI 250 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-he-eeeecccHHHhhh--hH
Confidence 67888888999999999999998664 7888999999999999998 4443 233333 54 4899999998653 47
Q ss_pred cCccccceeecCCCccccCCc-hhhhccccceEEEccCcccccc
Q 001274 646 GNLQMLEALYLDDNQLIGEIP-ASMGEQMSLLVCNLSNNNLVGT 688 (1109)
Q Consensus 646 ~~l~~L~~L~Ls~N~l~~~ip-~~~~~l~~L~~l~ls~N~l~g~ 688 (1109)
.+|++|+.|||++|-|++.-- .-+..+.+|.+|+|.+|++.+.
T Consensus 251 e~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 251 ENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred HhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 899999999999999986443 2256678899999999998765
No 495
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.48 E-value=4.2e-06 Score=93.64 Aligned_cols=169 Identities=18% Similarity=0.285 Sum_probs=125.8
Q ss_pred cceEEEEEec-CCcEEEEEEeeccCCCcchhHHHHHHHHHhccCCCCceeeEEEEEEe----CCceEEEEEeccC-CCHH
Q 001274 815 CGTVYKATLA-NGEVIAVKKIKLRGEGATADNSFLAEISTLGKIRHRNIVKLYGFCYH----QDSNLLLYEYMEN-GSLG 888 (1109)
Q Consensus 815 fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~ 888 (1109)
-.+.|++... ||..|+.|++...... .......-+++++++.|+|+|++.+++.. +-..++||+|.++ ++|.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~--~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQ--STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred cceeEeeeeccCCceeeeeeecccccc--CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 3478999854 8999999999432221 11123355788999999999999998873 3467899999986 4677
Q ss_pred HHhccCCCC------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCceeeCCCCceEEeeccccccc
Q 001274 889 EQLHGNKQT------------CLLDWDARYRIALGAAEGLCYLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLI 956 (1109)
Q Consensus 889 ~~l~~~~~~------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 956 (1109)
++-...... ...++...+.++.|+..||.++| +.|..-+-|.+.+|+++++.+++|+..|.....
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeee
Confidence 665432221 23678899999999999999999 779999999999999999999999988877665
Q ss_pred cCCCCCCccccccccceeccccccCCCCCccchhHHHHHHHHHHHhCCCC
Q 001274 957 DLPYSKSMSAIAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKSP 1006 (1109)
Q Consensus 957 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvll~elltg~~p 1006 (1109)
..+... | +. --.+-|.=.+|.+++.|.||..-
T Consensus 444 ~~d~~~-------------~--le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPTE-------------P--LE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCCc-------------c--hh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 432211 0 11 12357899999999999999653
No 496
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.46 E-value=4e-09 Score=108.68 Aligned_cols=235 Identities=18% Similarity=0.186 Sum_probs=124.6
Q ss_pred C-ccceeeecCCeEEEEeccCccccccccccccCccc--cceeecccCccCCC-CCccccCC-CCCceEEccCCccccc-
Q 001274 62 C-NWIGVECTDFKVTSVDLHGLNLSGILSPRICDLPR--LVEFNISMNFVTGS-IPTDLANC-SSLEILDLCTNRLHGV- 135 (1109)
Q Consensus 62 c-~w~gv~C~~~~v~~l~l~~~~l~g~~~~~~~~l~~--L~~L~ls~n~~~~~-~p~~l~~l-~~L~~L~Ls~n~l~~~- 135 (1109)
| +|+|+.=+..--+.+|+.+.+|. |..++.+.+ +..+.+..-.+... +.+.+.-+ ++|++||||+..++..
T Consensus 125 C~Rfyr~~~de~lW~~lDl~~r~i~---p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~st 201 (419)
T KOG2120|consen 125 CKRFYRLASDESLWQTLDLTGRNIH---PDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVST 201 (419)
T ss_pred HHHHhhccccccceeeeccCCCccC---hhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHH
Confidence 5 48886666667888898887764 233333322 22223332222222 22222222 4588888888877642
Q ss_pred CCchhhccccceEEEcccccccccccccccCcCCCceEEeecC-CCCCC-CCcccccccccceeccccccccCCCCccc-
Q 001274 136 IPFQLFFINTLRKLYLCENYIFGEIPEEIGNLTSLEELVIYSN-NLTGA-IPASISKLRQLRVIRAGHNSLSGPIPPEI- 212 (1109)
Q Consensus 136 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~l- 212 (1109)
.-.-+..+.+|+.|.|.++.+...|...|+...+|+.|+|+.+ .|+.. ..--+.+++.|..|+|+++.++...-..+
T Consensus 202 l~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V 281 (419)
T KOG2120|consen 202 LHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAV 281 (419)
T ss_pred HHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHH
Confidence 2223456778888888888888878788888888888888874 44421 11123555666666666665543221111
Q ss_pred cc-cccchhhhcccccccccCchhhhccccccceecccccccCCCCCCccccccccceeeeec-cceecCchhhhccCcc
Q 001274 213 SE-CEGLEVLGLAQNSLEGFLPSELEKLRNLTDLILWQNHLSGEIPPTIGNIQSLELLALHEN-SFSGGLPKELGKLSRL 290 (1109)
Q Consensus 213 ~~-l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L 290 (1109)
.. -++|+.|+|+++.=. -....+..-...+++|.+|||++| .++...-..|.+++.|
T Consensus 282 ~hise~l~~LNlsG~rrn---------------------l~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L 340 (419)
T KOG2120|consen 282 AHISETLTQLNLSGYRRN---------------------LQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYL 340 (419)
T ss_pred hhhchhhhhhhhhhhHhh---------------------hhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchh
Confidence 11 123444444443210 000011111223445555555554 2343344455666666
Q ss_pred ceEEeecccccCccCc---ccCCCCcCcEEEccCC
Q 001274 291 KKLYVYTNELNGTIPH---ELGNCTSAVEIDLSEN 322 (1109)
Q Consensus 291 ~~L~l~~n~l~~~~~~---~l~~l~~L~~L~Ls~n 322 (1109)
++|.++.|.. .+|. .+...++|++||..++
T Consensus 341 ~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 341 QHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred eeeehhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 6666666653 3443 3566677888887654
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.39 E-value=1.1e-06 Score=103.05 Aligned_cols=149 Identities=17% Similarity=0.202 Sum_probs=96.7
Q ss_pred hcCCCCCceEecCCcceEEEEEecCCcEEEEEEeeccCCC--------------------c------------------c
Q 001274 801 TGNFSEGAVIGRGACGTVYKATLANGEVIAVKKIKLRGEG--------------------A------------------T 842 (1109)
Q Consensus 801 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------------------~------------------~ 842 (1109)
...|.. +.|+.++-|.||+|++++|+.||||+.+..-.. . .
T Consensus 125 F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~ 203 (517)
T COG0661 125 FSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR 203 (517)
T ss_pred HHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence 334443 689999999999999999999999987532100 0 0
Q ss_pred hhHHHHHHHHHhccCC----CCceeeEEEEEE-eCCceEEEEEeccCCCHHHHhccCCCCCCCChHHHHHHHHHHHHHHH
Q 001274 843 ADNSFLAEISTLGKIR----HRNIVKLYGFCY-HQDSNLLLYEYMENGSLGEQLHGNKQTCLLDWDARYRIALGAAEGLC 917 (1109)
Q Consensus 843 ~~~~~~~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~ 917 (1109)
.+-++.+|+..+.+++ ..--+.+-.++. ......++|||++|-.+.+...-.... ++.+.+.....++.--.-
T Consensus 204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g--~d~k~ia~~~~~~f~~q~ 281 (517)
T COG0661 204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG--IDRKELAELLVRAFLRQL 281 (517)
T ss_pred HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC--CCHHHHHHHHHHHHHHHH
Confidence 0123445655555552 222233333333 356779999999998888874322221 443333333333222222
Q ss_pred HHhhcCCCCeEecCCCCCceeeCCCCceEEeecccccccc
Q 001274 918 YLHYDCRPHIIHRDIKSNNILLDEEFQAHVGDFGLAKLID 957 (1109)
Q Consensus 918 ~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 957 (1109)
+-| |++|.|.+|.||+++.+|++.+.|||+.....
T Consensus 282 ~~d-----gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 282 LRD-----GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred Hhc-----CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 334 99999999999999999999999999987664
No 498
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.37 E-value=2.3e-08 Score=101.90 Aligned_cols=216 Identities=21% Similarity=0.189 Sum_probs=131.6
Q ss_pred hhccccceEEEccccccccccc----ccccCcCCCceEEeecC---CCCCCCCcccccccccceeccccccccCCCCccc
Q 001274 140 LFFINTLRKLYLCENYIFGEIP----EEIGNLTSLEELVIYSN---NLTGAIPASISKLRQLRVIRAGHNSLSGPIPPEI 212 (1109)
Q Consensus 140 l~~l~~L~~L~L~~n~l~~~~p----~~l~~l~~L~~L~L~~n---~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l 212 (1109)
+..+..++.++||+|.|..+-. ..|.+-.+|++.+++.- +....++.++. .+-+.+
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~-----------------~Ll~aL 88 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLV-----------------MLLKAL 88 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHH-----------------HHHHHH
Confidence 3446667777777777765433 33455566666666652 11222222211 112345
Q ss_pred cccccchhhhcccccccccCchh----hhccccccceecccccccCCCC-CC-------------ccccccccceeeeec
Q 001274 213 SECEGLEVLGLAQNSLEGFLPSE----LEKLRNLTDLILWQNHLSGEIP-PT-------------IGNIQSLELLALHEN 274 (1109)
Q Consensus 213 ~~l~~L~~L~L~~n~l~~~~p~~----l~~l~~L~~L~L~~N~l~~~~p-~~-------------l~~l~~L~~L~L~~N 274 (1109)
..|++|+..+||.|.+....|.. +++-+.|+||.|++|.+. .+. .- ..+-+.|++..+..|
T Consensus 89 lkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 89 LKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred hcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 56777777777777776555543 455677888888888765 222 11 234467999999999
Q ss_pred cceecCchh-----hhccCccceEEeecccccCcc-----CcccCCCCcCcEEEccCCcccCCC----cccccCCCCcce
Q 001274 275 SFSGGLPKE-----LGKLSRLKKLYVYTNELNGTI-----PHELGNCTSAVEIDLSENQLTGFI----PRELGLIPNLCL 340 (1109)
Q Consensus 275 ~l~~~~p~~-----l~~l~~L~~L~l~~n~l~~~~-----~~~l~~l~~L~~L~Ls~n~l~~~~----p~~l~~l~~L~~ 340 (1109)
++.. .|.. +..-.+|+.+.+..|.|.-.. -..+..+.+|+.|||..|.++-.. ...+..++.|+.
T Consensus 168 Rlen-gs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 168 RLEN-GSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred hhcc-CcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 9873 3322 223368999999999886321 123566789999999999987432 234455667777
Q ss_pred EecccccccCcccccc----c--CCCCccEEEcccCcccC
Q 001274 341 LQLFENMLQGSIPREL----G--QLTQLHKLDLSINNLTG 374 (1109)
Q Consensus 341 L~L~~n~l~~~~p~~l----~--~l~~L~~L~Ls~N~l~~ 374 (1109)
|.+.+|.++.....++ . ..++|..|-..+|...+
T Consensus 247 L~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 247 LRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred ccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 8877777765443322 1 24566666667666654
No 499
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.36 E-value=2.5e-08 Score=91.40 Aligned_cols=114 Identities=21% Similarity=0.303 Sum_probs=63.9
Q ss_pred ccccEEEccCCccCCCCChhhcccccccEEecccCcccccCCcCCCCCCCCCeeecCCCcCccCCCcccccccccceecc
Q 001274 504 RNLERLHLSENYFVGYIPSEVGNLEHLVTFNISSNSLSGTIPHELGNCVNLQRLDLSRNQFTGSAPEELGQLVNLELLKL 583 (1109)
Q Consensus 504 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 583 (1109)
..|+..+|++|.+....+..-...+.++.|+|++|.|+ .+|.++..++.|+.|+++.|.+. ..|..+..|.+|..|+.
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 34455566666666433333334456666677777776 56666667777777777777766 56666666666666666
Q ss_pred cccccccccCcccCCCcccceeeccCccccccccccc
Q 001274 584 SDNKLTGAIPSSLGGLARLTELQMGGNIFSGSIPVAL 620 (1109)
Q Consensus 584 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 620 (1109)
.+|.+..+.-+ +---+.....++.++++.+.-|..+
T Consensus 131 ~~na~~eid~d-l~~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 131 PENARAEIDVD-LFYSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred CCCccccCcHH-HhccccHHHHHhcCCcccccCcccc
Confidence 66666533222 2111222333445555555444433
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.36 E-value=3.3e-08 Score=90.63 Aligned_cols=136 Identities=22% Similarity=0.270 Sum_probs=78.6
Q ss_pred cccEEecccCcccccCCcC---CCCCCCCCeeecCCCcCccCCCcccccc-cccceecccccccccccCcccCCCcccce
Q 001274 529 HLVTFNISSNSLSGTIPHE---LGNCVNLQRLDLSRNQFTGSAPEELGQL-VNLELLKLSDNKLTGAIPSSLGGLARLTE 604 (1109)
Q Consensus 529 ~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 604 (1109)
.+..++|++++|- .+++. +.....|+..+|++|.+. .+|..|... +.++.|+|++|+|+ .+|..+..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 4555666666664 33333 233344555566666666 455555433 35666666666665 34444555555555
Q ss_pred eeccCccccccccccccccchhhhhhccCCccccccccccccCccccceeecCCCccccCCchhhhccccceEEEccCcc
Q 001274 605 LQMGGNIFSGSIPVALGQLTALQIALNISHNNLSGVIPYELGNLQMLEALYLDDNQLIGEIPASMGEQMSLLVCNLSNNN 684 (1109)
Q Consensus 605 L~l~~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~l~ls~N~ 684 (1109)
|+++.|++ . ..|..+..|.+|-.||..+|.+- +||-.+..-......++.+++
T Consensus 105 lNl~~N~l-------------------------~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnep 157 (177)
T KOG4579|consen 105 LNLRFNPL-------------------------N-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEP 157 (177)
T ss_pred cccccCcc-------------------------c-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCc
Confidence 55555544 4 34555666777777888888776 677554443444455667777
Q ss_pred cccccCCCcc
Q 001274 685 LVGTVPNTTV 694 (1109)
Q Consensus 685 l~g~~p~~~~ 694 (1109)
|.+..|...|
T Consensus 158 l~~~~~~klq 167 (177)
T KOG4579|consen 158 LGDETKKKLQ 167 (177)
T ss_pred ccccCccccc
Confidence 8777776544
Done!